BLASTX nr result
ID: Catharanthus22_contig00008575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00008575
(587 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 221 1e-55
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 220 2e-55
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 218 7e-55
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 207 2e-51
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 203 2e-50
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 199 3e-49
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 197 2e-48
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 192 5e-47
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 192 5e-47
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 190 2e-46
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe... 187 2e-45
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 184 1e-44
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 184 1e-44
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 182 4e-44
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 182 4e-44
ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polyme... 182 4e-44
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 182 6e-44
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 181 1e-43
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 181 1e-43
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 181 2e-43
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 221 bits (563), Expect = 1e-55
Identities = 112/195 (57%), Positives = 140/195 (71%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVLKTAKEGI 406
G+TH Y+ HV+ DGSY+FKGP L +THLQ+ LGDENVLIVKF + + GI
Sbjct: 316 GRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSLGDENVLIVKFEQNTPGCPEEIVQNGI 375
Query: 405 LVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCDGSDSYILSTR 226
LVGLRRYRFFV+KD+ K + +DK K+ VKCYFVR +SL P + ++YIL +
Sbjct: 376 LVGLRRYRFFVYKDDG-----KKRSSKDKEEKIDSVKCYFVRMESLNPYE-KETYILRDK 429
Query: 225 SMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDTPCRDERGRII 46
++EARC FMHVHMVSSM KYMARFSL LS T+KL VDL++V +++I+D C D+ GRII
Sbjct: 430 MVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIEDICCHDKSGRII 489
Query: 45 CGEDGDPLILTDGTG 1
EDG PLI TDGTG
Sbjct: 490 YDEDGKPLIHTDGTG 504
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 220 bits (561), Expect = 2e-55
Identities = 113/195 (57%), Positives = 139/195 (71%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVLKTAKEGI 406
G+TH Y+ HV+ D SY+FKGP L +THLQ LGDENVLIVKF + + GI
Sbjct: 260 GRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLGDENVLIVKFEQNTPGCPEEIVQNGI 319
Query: 405 LVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCDGSDSYILSTR 226
LVGLRRYRFFV+KD+ R K DK K+ VKCYFVR +SL P + +++YIL +
Sbjct: 320 LVGLRRYRFFVYKDDGKKRRLK-----DKEEKIDSVKCYFVRMESLNPYE-NETYILHDK 373
Query: 225 SMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDTPCRDERGRII 46
++EARC FMHVHMVSSM KYMARFSLILS T+KL VDL++V +++I+D C D+ GRII
Sbjct: 374 MVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIYCHDKSGRII 433
Query: 45 CGEDGDPLILTDGTG 1
EDG PLI TDGTG
Sbjct: 434 YDEDGKPLIHTDGTG 448
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 218 bits (556), Expect = 7e-55
Identities = 112/194 (57%), Positives = 139/194 (71%)
Frame = -3
Query: 582 KTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVLKTAKEGIL 403
KTH YY H+ +G +FKGP LNT +THLQR LGD+NVL+VKFV E +EGIL
Sbjct: 235 KTHIYYCHIKQNGQCTFKGPYLNTARTHLQRALGDDNVLLVKFV-EDTSCANMIVEEGIL 293
Query: 402 VGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCDGSDSYILSTRS 223
VGLRRYRFFV+KD+ ++K K K A +KCYFVRF+S+ C+ SY+ ST+
Sbjct: 294 VGLRRYRFFVYKDD----KEKKKSPAMMKKKTASLKCYFVRFESIETCNDGGSYVFSTKR 349
Query: 222 MYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDTPCRDERGRIIC 43
+ +ARC FMHVHMVS+M KY AR SLILSKTIKL V+L++V +E+I+D CRDE G II
Sbjct: 350 ISQARCQFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERIEDILCRDENGCIIK 409
Query: 42 GEDGDPLILTDGTG 1
EDG+P I TDGTG
Sbjct: 410 DEDGEPRIHTDGTG 423
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 207 bits (526), Expect = 2e-51
Identities = 112/206 (54%), Positives = 136/206 (66%), Gaps = 12/206 (5%)
Frame = -3
Query: 582 KTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGE------------GK 439
KTH Y+ HV DGSY FKGP LN T+THLQR LGDEN+L+VKF +
Sbjct: 173 KTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSN 232
Query: 438 HSVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPC 259
S K A+EGI VGLR+YRFFVFKD + +KK + + VKCYFV +S A
Sbjct: 233 ASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKK--------NPTSSVKCYFVFMESSA-- 282
Query: 258 DGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQD 79
LS ++++EARC+FMH HMVSS+ KYMARFSLILSKT+KL VDLSTV +++I D
Sbjct: 283 -------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDD 335
Query: 78 TPCRDERGRIICGEDGDPLILTDGTG 1
P RDE G ++ ED PLILTDGTG
Sbjct: 336 EPGRDEDGHVVYDEDWKPLILTDGTG 361
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 203 bits (517), Expect = 2e-50
Identities = 113/206 (54%), Positives = 136/206 (66%), Gaps = 12/206 (5%)
Frame = -3
Query: 582 KTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFV------------GEGK 439
KTH Y+ HV DGS FKGP LN TKTHLQR LGD+NVL+VKF G
Sbjct: 263 KTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSF 322
Query: 438 HSVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPC 259
++ K A++GIL+GLRRY FFVFKD + +KK + + VKCYFVR +S A
Sbjct: 323 YAYSKIARDGILLGLRRYHFFVFKDGGKEEKKK-------NPTTSAVKCYFVRMESDAYI 375
Query: 258 DGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQD 79
D + Y LS R+++EAR LFMH HMVSS+ YMARFSLILSKTI L +DLSTV V++I D
Sbjct: 376 DKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGD 435
Query: 78 TPCRDERGRIICGEDGDPLILTDGTG 1
PC+D G +I DG PLI TDGTG
Sbjct: 436 IPCKDIYGNVIY-RDGKPLIHTDGTG 460
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 199 bits (507), Expect = 3e-49
Identities = 112/214 (52%), Positives = 136/214 (63%), Gaps = 20/214 (9%)
Frame = -3
Query: 582 KTHFYYSHVYGDGSYSFK--------GPCLNTTKTHLQRELGDENVLIVKFVGE------ 445
KTH Y+ HV DGSY FK GP LN T+THLQR LGDEN+L+VKF +
Sbjct: 173 KTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSS 232
Query: 444 ------GKHSVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFV 283
S K A+EGI VGLR+YRFFVFKD + +KK + + VKCYFV
Sbjct: 233 LNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKK--------NPTSSVKCYFV 284
Query: 282 RFDSLAPCDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLST 103
+S A LS ++++EARC+FMH HMVSS+ KYMARFSLILSKT+KL VDLST
Sbjct: 285 FMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLST 335
Query: 102 VKVEQIQDTPCRDERGRIICGEDGDPLILTDGTG 1
V +++I D P RDE G ++ ED PLILTDGTG
Sbjct: 336 VNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTG 369
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 197 bits (501), Expect = 2e-48
Identities = 111/207 (53%), Positives = 138/207 (66%), Gaps = 12/207 (5%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVLKTA---- 418
G+TH Y +V DGS FKGP L +T+THLQR LGD+NVL+VKF G + ++T+
Sbjct: 180 GRTHVYQCYVSSDGSLRFKGPILQSTQTHLQRSLGDDNVLLVKFAENGIANNIRTSAEEA 239
Query: 417 --------KEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAP 262
KEGI VGLR YRFFVFKD + +KK D +S + VKCYFVR S
Sbjct: 240 YRLYGKFGKEGINVGLRLYRFFVFKDGGKEEKKK-----DPTS--SSVKCYFVRMQSCWS 292
Query: 261 CDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQ 82
DGS +YILS +++ EAR LFMH H++ S+ KYMARFSLILSKT KL +DL+TV V+ IQ
Sbjct: 293 IDGSANYILSNKTVSEARGLFMHAHLLPSLDKYMARFSLILSKTFKLNIDLATVNVQTIQ 352
Query: 81 DTPCRDERGRIICGEDGDPLILTDGTG 1
D C+DE G II ++ P ILTDGTG
Sbjct: 353 DVYCQDENGNIIY-DNEKPRILTDGTG 378
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 192 bits (488), Expect = 5e-47
Identities = 107/207 (51%), Positives = 139/207 (67%), Gaps = 12/207 (5%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGE-GKH--------- 436
GKTH Y+ H+ G+ +FKGP LN T+THLQRELGD+N+L+VKF E G H
Sbjct: 219 GKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNNWNDS 278
Query: 435 --SVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAP 262
+ A+EGILVGLR Y FFVFKD + +KK D S+ + VKCYFVR +S A
Sbjct: 279 YSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKK-----DPST--SPVKCYFVRMESSAF 331
Query: 261 CDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQ 82
D YILS ++++EAR +FMHV VSS+ YM+R SLILSKT+KL VD S + +E+I+
Sbjct: 332 IDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIE 391
Query: 81 DTPCRDERGRIICGEDGDPLILTDGTG 1
D PCRD+ G ++ +DG+ LI TDGTG
Sbjct: 392 DEPCRDKDGNVVY-KDGEALIHTDGTG 417
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 192 bits (488), Expect = 5e-47
Identities = 107/207 (51%), Positives = 139/207 (67%), Gaps = 12/207 (5%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGE-GKH--------- 436
GKTH Y+ H+ G+ +FKGP LN T+THLQRELGD+N+L+VKF E G H
Sbjct: 221 GKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNNWNDS 280
Query: 435 --SVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAP 262
+ A+EGILVGLR Y FFVFKD + +KK D S+ + VKCYFVR +S A
Sbjct: 281 YSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKK-----DPST--SPVKCYFVRMESSAF 333
Query: 261 CDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQ 82
D YILS ++++EAR +FMHV VSS+ YM+R SLILSKT+KL VD S + +E+I+
Sbjct: 334 IDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIE 393
Query: 81 DTPCRDERGRIICGEDGDPLILTDGTG 1
D PCRD+ G ++ +DG+ LI TDGTG
Sbjct: 394 DEPCRDKDGNVVY-KDGEALIHTDGTG 419
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 190 bits (483), Expect = 2e-46
Identities = 107/205 (52%), Positives = 130/205 (63%), Gaps = 10/205 (4%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVLKT----- 421
GKTH+Y HV DGSY+FKGP L +T THL + LGDENVL VKF K+S
Sbjct: 214 GKTHYYQCHVAPDGSYTFKGPLLESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYF 273
Query: 420 -----AKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCD 256
AK GI+VGLRRY+FFVFKD D + K D S+K A KCYF+R DS A D
Sbjct: 274 TYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNK-----DVSTKRA--KCYFIRTDSTASID 326
Query: 255 GSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDT 76
YI S +S++EAR FMHVH + S+ YMARFSLILSKT KL VDL+ V E I+D
Sbjct: 327 MEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDI 386
Query: 75 PCRDERGRIICGEDGDPLILTDGTG 1
PC D+ G+ + ++ P I +DGTG
Sbjct: 387 PCHDQDGKDVLDKNKKPRIHSDGTG 411
>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 187 bits (475), Expect = 2e-45
Identities = 112/208 (53%), Positives = 130/208 (62%), Gaps = 13/208 (6%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTK-THLQRELGDENVLIVKF---VGEGKHSVLK-- 424
GKT+ Y+ V DGSY FKGPCLN TK T LQ+ LGD+NVL+VKF V E + +K
Sbjct: 29 GKTYVYHCEVSVDGSYKFKGPCLNNTKRTLLQKVLGDDNVLMVKFSDVVTERVPTAIKDN 88
Query: 423 -------TAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLA 265
A+EGILVGLRRY+FFVFKD N +KK + + VKCYF+ S A
Sbjct: 89 NYANYSKVAREGILVGLRRYQFFVFKDGGNKEKKK-------NPTSSPVKCYFICVGSNA 141
Query: 264 PCDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQI 85
D S+ Y S R ++E RC+FMH H VSS+ YMARFSLILSKT L VD S VKVE I
Sbjct: 142 AIDRSEDYKFSNRKIHETRCIFMHAHTVSSVSNYMARFSLILSKTESLEVDWSLVKVEDI 201
Query: 84 QDTPCRDERGRIICGEDGDPLILTDGTG 1
D C DE G I DG PLI TDGTG
Sbjct: 202 DDEYCLDESGNRI-DRDGKPLIHTDGTG 228
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 184 bits (468), Expect = 1e-44
Identities = 103/208 (49%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVLKT----- 421
G+TH Y V+ DG+ FKGP L +T+THLQ+ LGD+NVL+VKF +G +T
Sbjct: 194 GRTHVYQCFVFPDGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDGSGKNFRTHAEEA 253
Query: 420 -------AKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAP 262
KEGI VGLR YRFFVFKD N+ E+ K + VKCYFVR S
Sbjct: 254 NALYGKFGKEGIRVGLRLYRFFVFKDGGNE-------EKQKDPTSSTVKCYFVRMQSGCS 306
Query: 261 CDGSDSYILSTRSMYEARCLFMHVHM-VSSMVKYMARFSLILSKTIKLPVDLSTVKVEQI 85
D YILS +++ EAR LFMH HM + ++ KYMARFSLILSKT+KL +DL+TV V++I
Sbjct: 307 ADEGADYILSNKTVSEARTLFMHAHMLLPNLNKYMARFSLILSKTLKLNIDLTTVSVQKI 366
Query: 84 QDTPCRDERGRIICGEDGDPLILTDGTG 1
D C+D G I+ ++ P ILTDGTG
Sbjct: 367 PDEYCKDANGNIMV-DNEKPRILTDGTG 393
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 184 bits (468), Expect = 1e-44
Identities = 100/205 (48%), Positives = 129/205 (62%), Gaps = 10/205 (4%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVL------- 427
GKTH+Y HV DGSY+FKGP L T THL + LGDENVL VKF K+S
Sbjct: 210 GKTHYYQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDENVLTVKFADVPKNSSTYSNDRYF 269
Query: 426 ---KTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCD 256
+ AK GI++GLRRY+FFVFKD + +KK D S+K VKCYF+R DS A CD
Sbjct: 270 TYKEIAKNGIMIGLRRYQFFVFKDGGKEEKKK-----DLSTK--KVKCYFIRTDSTASCD 322
Query: 255 GSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDT 76
+ YI + +S++EAR FMHVH ++ YMARFSLILSKT L VD++ + + I D
Sbjct: 323 MENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDI 382
Query: 75 PCRDERGRIICGEDGDPLILTDGTG 1
C D+ G+ + ++ P I +DGTG
Sbjct: 383 HCHDQDGKDVLDKNKKPCIHSDGTG 407
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 182 bits (463), Expect = 4e-44
Identities = 105/209 (50%), Positives = 131/209 (62%), Gaps = 14/209 (6%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHS--------- 433
GKTH Y+ HV DGSY FKGP L+ + LQR LGD+N+L+VKF GE K
Sbjct: 89 GKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKF-GEVKDDRDSGSRSLD 147
Query: 432 -----VLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSL 268
K EGI VGLR YRFFVFKD + +KK + VKC+FVR +S+
Sbjct: 148 DYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKK-------DPTTSPVKCFFVRMESV 200
Query: 267 APCDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQ 88
A D D+ ILS +++ +AR +FMHV +SS+ YMARFSLILSKT+ L VDLS V ++
Sbjct: 201 ASIDNQDN-ILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSCVDIKT 259
Query: 87 IQDTPCRDERGRIICGEDGDPLILTDGTG 1
I D PCRD+ G ++ G DG PLI TDGTG
Sbjct: 260 IADEPCRDKDGNVVYGTDGKPLIHTDGTG 288
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 182 bits (463), Expect = 4e-44
Identities = 105/209 (50%), Positives = 131/209 (62%), Gaps = 14/209 (6%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHS--------- 433
GKTH Y+ HV DGSY FKGP L+ + LQR LGD+N+L+VKF GE K
Sbjct: 111 GKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKF-GEVKDDRDSGSRSLD 169
Query: 432 -----VLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSL 268
K EGI VGLR YRFFVFKD + +KK + VKC+FVR +S+
Sbjct: 170 DYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKK-------DPTTSPVKCFFVRMESV 222
Query: 267 APCDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQ 88
A D D+ ILS +++ +AR +FMHV +SS+ YMARFSLILSKT+ L VDLS V ++
Sbjct: 223 ASIDNQDN-ILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSCVDIKT 281
Query: 87 IQDTPCRDERGRIICGEDGDPLILTDGTG 1
I D PCRD+ G ++ G DG PLI TDGTG
Sbjct: 282 IADEPCRDKDGNVVYGTDGKPLIHTDGTG 310
>ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Cucumis
sativus]
Length = 560
Score = 182 bits (463), Expect = 4e-44
Identities = 103/198 (52%), Positives = 127/198 (64%), Gaps = 12/198 (6%)
Frame = -3
Query: 558 VYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFV------------GEGKHSVLKTAK 415
+Y + GP LN TKTHLQR LGD+NVL+VKF G ++ K A+
Sbjct: 296 LYQPSIFIHAGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIAR 355
Query: 414 EGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCDGSDSYIL 235
+GIL+GLRRY FFVFKD + +KK + + VKCYFVR +S A D + Y L
Sbjct: 356 DGILLGLRRYHFFVFKDGGKEEKKK-------NPTTSAVKCYFVRMESDAYIDKIEPYKL 408
Query: 234 STRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDTPCRDERG 55
S R+++EAR LFMH HMVSS+ YMARFSLILSKTI L +DLSTV V++I D PC+D G
Sbjct: 409 SNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYG 468
Query: 54 RIICGEDGDPLILTDGTG 1
+I DG PLI TDGTG
Sbjct: 469 NVIY-RDGKPLIHTDGTG 485
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 182 bits (462), Expect = 6e-44
Identities = 107/207 (51%), Positives = 131/207 (63%), Gaps = 12/207 (5%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKF---------VGEGKH- 436
GKTH Y HV +GS+ FKGP L K HLQ+ LGD+NVL+VKF +G H
Sbjct: 190 GKTHIYRCHVSPEGSFRFKGPYLEKPKKHLQKVLGDDNVLMVKFAEEEAERFSIGSRDHY 249
Query: 435 --SVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAP 262
K +EGILVGLRRY FFVFKD + +KK D +S + VKC+F+R S A
Sbjct: 250 YAGYSKICREGILVGLRRYCFFVFKDGGKEEKKK-----DPTS--SPVKCFFIRIHSDAC 302
Query: 261 CDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQ 82
D + SYILS R++ EAR LFMH H VSS+ YM RFSLILS T+ L +DLS+V ++ I+
Sbjct: 303 IDQNVSYILSGRTISEARKLFMHAHTVSSVSNYMIRFSLILSNTLSLKIDLSSVNIDIIE 362
Query: 81 DTPCRDERGRIICGEDGDPLILTDGTG 1
D C+DE G I DG PLI TDGTG
Sbjct: 363 DEYCQDESGNPIY-RDGKPLIYTDGTG 388
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 181 bits (460), Expect = 1e-43
Identities = 109/207 (52%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCL-NTTKTHLQRELGDENVLIVKFVGEGKH--------- 436
G TH Y+ +V DGSY FKGP L +T LQ+ELGD+NVL+VKF E
Sbjct: 618 GSTHVYHCYVNVDGSYRFKGPYLYKIRRTLLQKELGDDNVLMVKFAKEEVQRGQSGACHN 677
Query: 435 --SVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAP 262
+ +K A+EGILVGLRRYRFFVFKD N+ +KK + + VKCYFVR S A
Sbjct: 678 YPTYMKVAREGILVGLRRYRFFVFKDGGNEEKKK-------NPTSSPVKCYFVRVASDAA 730
Query: 261 CDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQ 82
D Y LS +MYEARCLFMH H ++S+ YMARFSLILSKT+ L D S VKVE I
Sbjct: 731 IDKGVYYRLSHMTMYEARCLFMHAHTLASIDNYMARFSLILSKTMSLKADWSLVKVEIID 790
Query: 81 DTPCRDERGRIICGEDGDPLILTDGTG 1
+ C DE G I D PLI TDGTG
Sbjct: 791 EEYCLDESGNCIY-RDEKPLIHTDGTG 816
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 181 bits (459), Expect = 1e-43
Identities = 97/204 (47%), Positives = 127/204 (62%), Gaps = 10/204 (4%)
Frame = -3
Query: 582 KTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGEGKHSVL-------- 427
KTH+Y HV DGSY+FKGP L T THL + LGDENVL VKF K+S
Sbjct: 219 KTHYYQCHVASDGSYTFKGPLLEPTGTHLHKVLGDENVLTVKFADVQKNSSTYSNDRYSA 278
Query: 426 --KTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLAPCDG 253
+ AK GI+VGLRRY+FFVFKD K E+ K VKCYF+R DS A D
Sbjct: 279 YKRIAKNGIMVGLRRYQFFVFKDVG-------KAEKKKDFSTNGVKCYFIRTDSTAANDM 331
Query: 252 SDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQIQDTP 73
+YI S +++ EAR FMHVH + S+ KYMARFSLILSKT KL VD++ + ++I++
Sbjct: 332 GKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIH 391
Query: 72 CRDERGRIICGEDGDPLILTDGTG 1
C D+ ++ ++ +P + +DGTG
Sbjct: 392 CHDQNNNVVLDKNKEPRMHSDGTG 415
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 181 bits (458), Expect = 2e-43
Identities = 102/208 (49%), Positives = 127/208 (61%), Gaps = 13/208 (6%)
Frame = -3
Query: 585 GKTHFYYSHVYGDGSYSFKGPCLNTTKTHLQRELGDENVLIVKFVGE------------- 445
GK Y HV G++SFKGP L +T+THL+R LGD+ VL VKF E
Sbjct: 197 GKAENYQCHVDPVGNFSFKGPFLESTQTHLRRVLGDDKVLTVKFAEEMVDERRGEFNLSR 256
Query: 444 GKHSVLKTAKEGILVGLRRYRFFVFKDESNDARKKYKIERDKSSKLADVKCYFVRFDSLA 265
K+ + AK+GILVGLRRY FFVFKD + E+ K++ VKCYFV S A
Sbjct: 257 SKNIFRRIAKDGILVGLRRYHFFVFKDGGKE-------EKRKNANTTGVKCYFVCMKSDA 309
Query: 264 PCDGSDSYILSTRSMYEARCLFMHVHMVSSMVKYMARFSLILSKTIKLPVDLSTVKVEQI 85
D YILS +++ EAR +FM VH V ++ KYMARFSLILSKTIKL VDL +V +E+I
Sbjct: 310 ESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSLILSKTIKLEVDLGSVNIERI 369
Query: 84 QDTPCRDERGRIICGEDGDPLILTDGTG 1
D PC D I+ ++G LI TDGTG
Sbjct: 370 NDKPCLDNHNEIVYDQNGQCLIHTDGTG 397