BLASTX nr result

ID: Catharanthus22_contig00008293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008293
         (577 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39646.3| unnamed protein product [Vitis vinifera]               86   7e-15
ref|XP_002318931.1| hypothetical protein POPTR_0013s00620g [Popu...    85   1e-14
ref|XP_004302306.1| PREDICTED: zinc finger CCCH domain-containin...    80   4e-13
ref|XP_004302307.1| PREDICTED: zinc finger CCCH domain-containin...    77   2e-12
gb|EMJ07490.1| hypothetical protein PRUPE_ppa016420mg [Prunus pe...    77   3e-12
gb|EOY11730.1| C2H2 and C2HC zinc fingers superfamily protein, p...    73   6e-11
ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin...    72   8e-11
ref|XP_006344809.1| PREDICTED: zinc finger CCCH domain-containin...    72   1e-10
ref|XP_004967856.1| PREDICTED: zinc finger CCCH domain-containin...    71   2e-10
ref|XP_006428241.1| hypothetical protein CICLE_v10012993mg [Citr...    71   2e-10
sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-con...    70   3e-10
ref|XP_004230342.1| PREDICTED: zinc finger CCCH domain-containin...    69   7e-10
ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S...    68   1e-09
ref|XP_004495629.1| PREDICTED: zinc finger CCCH domain-containin...    68   2e-09
ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatu...    68   2e-09
gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]         66   6e-09
gb|ESW17024.1| hypothetical protein PHAVU_007G203900g [Phaseolus...    59   7e-07
gb|ESW17023.1| hypothetical protein PHAVU_007G203900g [Phaseolus...    59   7e-07
ref|NP_001190404.1| nucleic acid binding / zinc ion binding prot...    57   3e-06
ref|NP_001154741.1| nucleic acid binding / zinc ion binding prot...    57   3e-06

>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = +1

Query: 112 DVQSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           ++QS   PG Q++    LPGNV+ DS+G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 98  NIQSLSNPGNQLVGGGPLPGNVVKDSMGNSWGNLPPSLKPPPEGGYPPLPFLDWG 152


>ref|XP_002318931.1| hypothetical protein POPTR_0013s00620g [Populus trichocarpa]
           gi|222857307|gb|EEE94854.1| hypothetical protein
           POPTR_0013s00620g [Populus trichocarpa]
          Length = 150

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +1

Query: 91  KGTVPSSDVQSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFID 270
           +GT    +VQS  +PG Q+   +S PG  + +S+G SWGNLPPSL PPPE GYPPLPF+D
Sbjct: 89  QGTAFKDNVQSPTMPGNQLAGGSSFPGVAVRESMGMSWGNLPPSLKPPPEGGYPPLPFVD 148

Query: 271 WG 276
           WG
Sbjct: 149 WG 150


>ref|XP_004302306.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           isoform 1 [Fragaria vesca subsp. vesca]
          Length = 150

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 33/53 (62%), Positives = 41/53 (77%)
 Frame = +1

Query: 118 QSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           QS  + G Q++  +SLP  V+ D++G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 98  QSSTIQGNQMVAGSSLPDVVVRDNMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 150


>ref|XP_004302307.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           isoform 2 [Fragaria vesca subsp. vesca]
          Length = 138

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 32/52 (61%), Positives = 40/52 (76%)
 Frame = +1

Query: 121 SQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           +Q   G Q++  +SLP  V+ D++G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 87  TQGASGNQMVAGSSLPDVVVRDNMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 138


>gb|EMJ07490.1| hypothetical protein PRUPE_ppa016420mg [Prunus persica]
          Length = 150

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 33/53 (62%), Positives = 39/53 (73%)
 Frame = +1

Query: 118 QSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           QS      Q++  +SLP  V+ DS+G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 98  QSSTFQENQLVGGSSLPDVVVRDSMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 150


>gb|EOY11730.1| C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma
           cacao]
          Length = 133

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +1

Query: 154 SASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           +A  PG+V G  IG SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 93  AAPAPGSVEGAGIGMSWGNLPPSLKPPPEGGYPPLPFVDWG 133


>ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Cucumis sativus] gi|449508616|ref|XP_004163363.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           3-like [Cucumis sativus]
          Length = 156

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = +1

Query: 154 SASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           ++S  G+++ D +GTSWGNLPPSL PPP+ GYPPLPF+DWG
Sbjct: 116 NSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG 156


>ref|XP_006344809.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           isoform X1 [Solanum tuberosum]
           gi|565355893|ref|XP_006344810.1| PREDICTED: zinc finger
           CCCH domain-containing protein 3-like isoform X2
           [Solanum tuberosum]
          Length = 150

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = +1

Query: 94  GTVPSSDVQSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDW 273
           G  P  + +  F    Q   SAS PG+V  +  G S GNLPPSL PPPE GYPPLPF++W
Sbjct: 90  GLPPGENSREGFHSSSQPFGSASFPGDVFREKAGASLGNLPPSLRPPPEGGYPPLPFVEW 149

Query: 274 G 276
           G
Sbjct: 150 G 150


>ref|XP_004967856.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Setaria italica]
          Length = 164

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 35/49 (71%)
 Frame = +1

Query: 130 LPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           L G Q  E  S  GNVLG    +SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 118 LVGYQAAERNSFSGNVLGAH--SSWGNLPPSLQPPPEGGYPPLPFVDWG 164


>ref|XP_006428241.1| hypothetical protein CICLE_v10012993mg [Citrus clementina]
           gi|568853265|ref|XP_006480284.1| PREDICTED: zinc finger
           CCCH domain-containing protein 3-like isoform X1 [Citrus
           sinensis] gi|568853267|ref|XP_006480285.1| PREDICTED:
           zinc finger CCCH domain-containing protein 3-like
           isoform X2 [Citrus sinensis]
           gi|568853269|ref|XP_006480286.1| PREDICTED: zinc finger
           CCCH domain-containing protein 3-like isoform X3 [Citrus
           sinensis] gi|568853271|ref|XP_006480287.1| PREDICTED:
           zinc finger CCCH domain-containing protein 3-like
           isoform X4 [Citrus sinensis] gi|557530298|gb|ESR41481.1|
           hypothetical protein CICLE_v10012993mg [Citrus
           clementina]
          Length = 155

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +1

Query: 157 ASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           +S PG+++ DS+G SWGNLPPSL PPPE GYP LPF+DWG
Sbjct: 116 SSFPGDMMRDSMGMSWGNLPPSLKPPPEGGYPLLPFVDWG 155


>sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 3;
           Short=OsC3H3 gi|215701065|dbj|BAG92489.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218187901|gb|EEC70328.1| hypothetical protein
           OsI_01197 [Oryza sativa Indica Group]
           gi|222618113|gb|EEE54245.1| hypothetical protein
           OsJ_01120 [Oryza sativa Japonica Group]
          Length = 167

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = +1

Query: 136 GRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           G Q  + +S  GN+LG    TSWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 123 GYQAADGSSFSGNILGGH--TSWGNLPPSLRPPPEGGYPPFPFVDWG 167


>ref|XP_004230342.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Solanum lycopersicum]
          Length = 150

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = +1

Query: 94  GTVPSSDVQSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDW 273
           G  P  + +  F    Q   SAS PG+V  +  G S  NLPPSL PPPE GYPPLPF++W
Sbjct: 90  GLPPGENSREGFHSSSQPFGSASFPGDVFREKAGASLSNLPPSLRPPPEGGYPPLPFVEW 149

Query: 274 G 276
           G
Sbjct: 150 G 150


>ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
           gi|241927354|gb|EES00499.1| hypothetical protein
           SORBIDRAFT_03g009590 [Sorghum bicolor]
          Length = 164

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = +1

Query: 136 GRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           G Q  +  S  GN+LG    T+WGNLPPSL PPPE GYPPLPFIDWG
Sbjct: 120 GYQGPDRNSFSGNILGGH--TAWGNLPPSLQPPPEGGYPPLPFIDWG 164


>ref|XP_004495629.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           isoform X1 [Cicer arietinum]
           gi|502116894|ref|XP_004495630.1| PREDICTED: zinc finger
           CCCH domain-containing protein 3-like isoform X2 [Cicer
           arietinum]
          Length = 127

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 36/69 (52%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
 Frame = +1

Query: 82  FMGKGTVPSSDVQSQFLPGRQVLESASLPGNVLGDSIGTSWG----NLPPSLWPPPESGY 249
           F+ KG     D    F P  Q L+    PGNV GDS+ T  G    NLPPSL PPPE GY
Sbjct: 62  FVNKGFCRFGDSCKYFHPNTQQLQQ---PGNVAGDSMRTRMGVSLDNLPPSLQPPPEGGY 118

Query: 250 PPLPFIDWG 276
           P LPF+DWG
Sbjct: 119 PELPFVDWG 127


>ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatula]
           gi|355480285|gb|AES61488.1| Zinc finger matrin type 5
           [Medicago truncatula] gi|388501098|gb|AFK38615.1|
           unknown [Medicago truncatula]
          Length = 122

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +1

Query: 82  FMGKGTVPSSDVQSQFLPGRQVLES-ASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPL 258
           F+  G     D    F P  Q  +   + PGN++GD++G S+GNLPPSL PPPE GY  L
Sbjct: 57  FVNTGFCRYGDSCKYFHPNTQQQQPITTTPGNIVGDTMGVSFGNLPPSLQPPPEVGYSNL 116

Query: 259 PFIDWG 276
           PF+DWG
Sbjct: 117 PFLDWG 122


>gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
          Length = 166

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
 Frame = +1

Query: 88  GKGTVPSSDVQSQFLPGRQV-------LESASLPGNVLGDSIGTSWGNLPPSLWPPPESG 246
           G G+ P+  VQ   + G Q        ++  S  G +LG     SWGNLPPSL PPPE G
Sbjct: 99  GLGSGPAPMVQQSDIIGNQPNFVVYQGVDINSSSGKILGGH--ASWGNLPPSLQPPPEGG 156

Query: 247 YPPLPFIDWG 276
           YPPLPFIDWG
Sbjct: 157 YPPLPFIDWG 166


>gb|ESW17024.1| hypothetical protein PHAVU_007G203900g [Phaseolus vulgaris]
          Length = 121

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 166 PGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           PGNV    +G S GNLPPSL PPPE+GYP LPF+DWG
Sbjct: 89  PGNV----VGLSLGNLPPSLQPPPEAGYPHLPFVDWG 121


>gb|ESW17023.1| hypothetical protein PHAVU_007G203900g [Phaseolus vulgaris]
          Length = 125

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
 Frame = +1

Query: 151 ESASLPGNVL--GDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           + A +P  V+  G+ +G S GNLPPSL PPPE+GYP LPF+DWG
Sbjct: 82  QHAPIPSPVVHAGNVVGLSLGNLPPSLQPPPEAGYPHLPFVDWG 125


>ref|NP_001190404.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
           thaliana] gi|332006212|gb|AED93595.1| nucleic acid
           binding / zinc ion binding protein [Arabidopsis
           thaliana]
          Length = 166

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = +1

Query: 139 RQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           +Q ++ ++L  + +    GT W +LPPSL PPPE GYP LPFIDWG
Sbjct: 121 QQHIQGSTLNRDFVSGRPGTGWFDLPPSLKPPPEQGYPQLPFIDWG 166


>ref|NP_001154741.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
           thaliana] gi|332006211|gb|AED93594.1| nucleic acid
           binding / zinc ion binding protein [Arabidopsis
           thaliana]
          Length = 147

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = +1

Query: 139 RQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 276
           +Q ++ ++L  + +    GT W +LPPSL PPPE GYP LPFIDWG
Sbjct: 102 QQHIQGSTLNRDFVSGRPGTGWFDLPPSLKPPPEQGYPQLPFIDWG 147