BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008225
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   102   5e-20
gb|EOX94627.1| Tetratricopeptide repeat-like superfamily protein...   100   2e-19
ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containi...    96   5e-18
ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citr...    96   5e-18
gb|EXB26546.1| hypothetical protein L484_012535 [Morus notabilis]      89   5e-16
ref|XP_006349730.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_003590567.1| Pentatricopeptide repeat-containing protein ...    86   7e-15
ref|XP_004495160.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    85   1e-14
ref|XP_004247331.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
gb|EPS69874.1| hypothetical protein M569_04890 [Genlisea aurea]        79   5e-13
gb|ESW31879.1| hypothetical protein PHAVU_002G275800g, partial [...    75   1e-11
gb|ESW30958.1| hypothetical protein PHAVU_002G196700g [Phaseolus...    73   4e-11
ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]...    72   6e-11
sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-c...    72   6e-11
gb|EMJ04813.1| hypothetical protein PRUPE_ppa002292mg [Prunus pe...    71   1e-10
ref|XP_006281476.1| hypothetical protein CARUB_v10027560mg [Caps...    70   3e-10
ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t...    66   4e-09

>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 10/121 (8%)
 Frame = -3

Query: 343 NPSFKKTIRNPPPRLSNSSHKLKEISLLKEIYRQSDLEQAF----------NPYDNSRDE 194
           +P  KK  +NPP ++S    K  E   L+EI ++  + +AF          +P   S DE
Sbjct: 56  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 115

Query: 193 AYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDR 14
           AYS +LE C S++ALS G+Q+HAH++ S  + +S+FL T+LVFMYGKCG ++DAEK+FD 
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175

Query: 13  M 11
           M
Sbjct: 176 M 176


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 10/121 (8%)
 Frame = -3

Query: 343 NPSFKKTIRNPPPRLSNSSHKLKEISLLKEIYRQSDLEQAF----------NPYDNSRDE 194
           +P  KK  +NPP ++S    K  E   L+EI ++  + +AF          +P   S DE
Sbjct: 20  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 79

Query: 193 AYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDR 14
           AYS +LE C S++ALS G+Q+HAH++ S  + +S+FL T+LVFMYGKCG ++DAEK+FD 
Sbjct: 80  AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139

Query: 13  M 11
           M
Sbjct: 140 M 140


>gb|EOX94627.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 966

 Score =  100 bits (250), Expect = 2e-19
 Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 6/119 (5%)
 Frame = -3

Query: 340 PSFKKTIRNPP---PRLSNSSHKLKEISL---LKEIYRQSDLEQAFNPYDNSRDEAYSVL 179
           P   +T  +PP   P L +  + LK+I L   LKE +R   L  +FN Y    DE Y+ +
Sbjct: 40  PMLPQTQIHPPLKIPTLPHQPNTLKDICLRGNLKEAFRS--LSVSFNDYP---DEIYAPV 94

Query: 178 LEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           LE CA+++ALS+G QIHAHV+KS  V +S+FL TKLVFMYGKCGS+ +AE+VFD+M +R
Sbjct: 95  LELCANKKALSQGLQIHAHVIKSWSVSESVFLGTKLVFMYGKCGSIENAEQVFDQMGQR 153


>ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Citrus sinensis]
          Length = 993

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/97 (48%), Positives = 71/97 (73%), Gaps = 10/97 (10%)
 Frame = -3

Query: 262 LKEIYRQSDLEQAFNPYDN----------SRDEAYSVLLEHCASQEALSRGKQIHAHVLK 113
           L+E  +Q +L+ AF    N            DEAY+++L+ CA+++ALS+GKQ+HAH++K
Sbjct: 83  LREFCKQGNLKDAFRSLSNLFTNHNVFTIRPDEAYALVLDLCATKKALSQGKQVHAHLIK 142

Query: 112 SRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           S  + +S FL+TKL+FMYGKCGSVLDAE++FD++ +R
Sbjct: 143 SFDLYESSFLETKLLFMYGKCGSVLDAEQLFDKVSQR 179


>ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citrus clementina]
           gi|557546230|gb|ESR57208.1| hypothetical protein
           CICLE_v10024388mg [Citrus clementina]
          Length = 958

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/97 (48%), Positives = 71/97 (73%), Gaps = 10/97 (10%)
 Frame = -3

Query: 262 LKEIYRQSDLEQAFNPYDN----------SRDEAYSVLLEHCASQEALSRGKQIHAHVLK 113
           L+E  +Q +L+ AF    N            DEAY+++L+ CA+++ALS+GKQ+HAH++K
Sbjct: 48  LREFCKQGNLKDAFRSLSNLFTNHNVFTIRPDEAYALVLDLCATKKALSQGKQVHAHLIK 107

Query: 112 SRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           S  + +S FL+TKL+FMYGKCGSVLDAE++FD++ +R
Sbjct: 108 SFDLYESSFLETKLLFMYGKCGSVLDAEQLFDKVSQR 144


>gb|EXB26546.1| hypothetical protein L484_012535 [Morus notabilis]
          Length = 932

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 12/122 (9%)
 Frame = -3

Query: 331 KKTIRNPP-PRLSNSSHKLKEISLLKEIYRQSDLEQAFNPYDN-----------SRDEAY 188
           KKT+  P  PR      K  +I  LK+ + Q    +A     +             DE Y
Sbjct: 3   KKTLSLPKLPR------KPTKIQSLKQFWEQGSFHEALRSLGSFFADQTSSLQFCLDEVY 56

Query: 187 SVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMF 8
           S LL+ CA++  L +GKQIHAH++KS  V DS+FL+T L+FMYGKCGS+ +AEKVFD+M 
Sbjct: 57  SPLLKLCAAKRCLFQGKQIHAHMIKSCDVSDSVFLNTMLLFMYGKCGSIENAEKVFDKMR 116

Query: 7   ER 2
           ER
Sbjct: 117 ER 118


>ref|XP_006349730.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Solanum tuberosum]
          Length = 929

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 PPPRLSNSSHKLKEISLLKEIYRQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQ 134
           P  ++S +S K   I  LK+I RQ + +++     N        L+E CA ++AL +G+Q
Sbjct: 19  PTFKISPNSQKPAIIPSLKQICRQDNFKESVFTLSN--------LIETCAFEKALLQGQQ 70

Query: 133 IHAHVLKSRYVCD-SLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           IHAHVLK     D S+FL+TK+VFMYGKCGS+ DA+KVFDRM ER
Sbjct: 71  IHAHVLKFGLSGDDSVFLNTKIVFMYGKCGSIGDAQKVFDRMTER 115


>ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479615|gb|AES60818.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = -3

Query: 196 EAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFD 17
           +AYS  LE CAS +AL +G+Q+HAH LK++   DS+FLDTK V MYGKCGS  DA KVFD
Sbjct: 47  QAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD 106

Query: 16  RMFER 2
           +M ER
Sbjct: 107 KMSER 111


>ref|XP_004495160.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g63370-like [Cicer arietinum]
          Length = 1155

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/65 (58%), Positives = 52/65 (80%)
 Frame = -3

Query: 196 EAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFD 17
           +AYS  L+ CAS +AL +G+Q+HAH +K+++  D +FLDTK V MYGKCGS LDA+K+FD
Sbjct: 44  QAYSQALDLCASHKALPQGQQLHAHFIKAQHSLDYVFLDTKFVHMYGKCGSYLDAQKLFD 103

Query: 16  RMFER 2
           +M ER
Sbjct: 104 KMTER 108


>ref|XP_004247331.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Solanum lycopersicum]
          Length = 938

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 PPPRLSNSSHKLKEISLLKEIYRQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQ 134
           P  ++S +S K   I  LK+I RQ + +++     N        L+E  A ++AL +G+Q
Sbjct: 28  PTFKISPNSQKSAIIPSLKQICRQDNFKESVFTLSN--------LIETSAFEKALIQGQQ 79

Query: 133 IHAHVLKSRYVCD-SLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           IHAHVLK     D ++FL+TK+VFMYGKCGS+ DA+KVFDRM +R
Sbjct: 80  IHAHVLKLGLSGDDAVFLNTKIVFMYGKCGSIGDAQKVFDRMTKR 124


>gb|EPS69874.1| hypothetical protein M569_04890 [Genlisea aurea]
          Length = 922

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/66 (57%), Positives = 51/66 (77%)
 Frame = -3

Query: 199 DEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVF 20
           DEAYSV+L+ CAS++  S G+QIHA ++K + V  S FL TKLVFMYGKCG  ++AE++F
Sbjct: 45  DEAYSVILDSCASRKLPSLGRQIHADIIKRKDVDGSAFLGTKLVFMYGKCGCWVEAEELF 104

Query: 19  DRMFER 2
           D M +R
Sbjct: 105 DEMPQR 110


>gb|ESW31879.1| hypothetical protein PHAVU_002G275800g, partial [Phaseolus
           vulgaris]
          Length = 524

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/66 (56%), Positives = 51/66 (77%)
 Frame = -3

Query: 199 DEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVF 20
           + A+S+LL+ C +++AL +G+Q+HA +LKS     S+FL TKLV MYGKCGS+LDA KVF
Sbjct: 44  EHAHSLLLDFCTTEKALPQGQQLHARLLKSHV---SVFLATKLVHMYGKCGSLLDALKVF 100

Query: 19  DRMFER 2
           D + ER
Sbjct: 101 DEITER 106


>gb|ESW30958.1| hypothetical protein PHAVU_002G196700g [Phaseolus vulgaris]
          Length = 920

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = -3

Query: 199 DEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVF 20
           + A+S+LL+ C +++AL +G+Q+HA +LKS     S FL TKLV MYGKCGS+LDA KVF
Sbjct: 44  EHAHSLLLDFCTTEKALPQGQQLHARLLKSHV---SGFLATKLVHMYGKCGSLLDALKVF 100

Query: 19  DRMFER 2
           D + ER
Sbjct: 101 DEITER 106


>ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]
           gi|332646951|gb|AEE80472.1| RNA editing factor OTP86
           [Arabidopsis thaliana]
          Length = 884

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/88 (43%), Positives = 59/88 (67%)
 Frame = -3

Query: 265 LLKEIYRQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLF 86
           +L E +++ D+ +     +NS  EA++ +LE C  + A+S+G+Q+H+ + K+    +  F
Sbjct: 63  VLTEAFQRLDVSE-----NNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF 117

Query: 85  LDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           L  KLVFMYGKCGS+ DAEKVFD M +R
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMPDR 145


>sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/88 (43%), Positives = 59/88 (67%)
 Frame = -3

Query: 265 LLKEIYRQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLF 86
           +L E +++ D+ +     +NS  EA++ +LE C  + A+S+G+Q+H+ + K+    +  F
Sbjct: 63  VLTEAFQRLDVSE-----NNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF 117

Query: 85  LDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           L  KLVFMYGKCGS+ DAEKVFD M +R
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMPDR 145


>gb|EMJ04813.1| hypothetical protein PRUPE_ppa002292mg [Prunus persica]
          Length = 691

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 KLKE-ISLLKEIYRQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQIHAHVLKSR 107
           K KE I +L E    ++  Q  N  D      YS LL+ C  Q AL +GK +HAH   S 
Sbjct: 56  KFKEAIDILCEQKHLAEAIQLLNRIDRPSASIYSTLLQLCLQQRALVQGKLVHAHTKVSG 115

Query: 106 YVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           +V   LF+  +L+ +Y KCGS++DA+KVFD M ER
Sbjct: 116 FV-PGLFICNRLIDLYAKCGSLVDAQKVFDEMSER 149


>ref|XP_006281476.1| hypothetical protein CARUB_v10027560mg [Capsella rubella]
           gi|482550180|gb|EOA14374.1| hypothetical protein
           CARUB_v10027560mg [Capsella rubella]
          Length = 943

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
 Frame = -3

Query: 289 SHKLKEISLLKEIYRQSDLEQAFNPYD-----NSRDEAYSVLLEHCASQEALSRGKQIHA 125
           S+ +K + ++  +   S  ++AF   D     N   E Y+ +LE C    ALS+G+Q+H+
Sbjct: 30  SYPVKPVQVVSSL-NLSCFDEAFQRLDFIDDENLSMETYADVLELCGKFRALSQGRQLHS 88

Query: 124 HVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
            + K+    +S FL  KLVFMYGKCGSV DAEKVFD M +R
Sbjct: 89  RIFKT--FPESDFLAGKLVFMYGKCGSVDDAEKVFDEMPQR 127


>ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = -3

Query: 199 DEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVF 20
           + A+S+LL+ C + +AL +G+Q+HA +LKS     S FL TKL+ MY KCGS+ DA KVF
Sbjct: 46  EHAHSLLLDLCVAVKALPQGQQLHARLLKSHL---SAFLATKLLHMYEKCGSLKDAVKVF 102

Query: 19  DRMFER 2
           D M ER
Sbjct: 103 DEMTER 108


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/101 (37%), Positives = 53/101 (52%)
 Frame = -3

Query: 304 RLSNSSHKLKEISLLKEIYRQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQIHA 125
           RL +S    + I +L    R  +  Q     +      Y  LL+ C  Q AL  GKQ+HA
Sbjct: 84  RLCDSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHA 143

Query: 124 HVLKSRYVCDSLFLDTKLVFMYGKCGSVLDAEKVFDRMFER 2
           H+  S  +   L++  +L+ MY KCGS++DAEKVFD M  R
Sbjct: 144 HIKTSGSI--GLYISNRLLDMYAKCGSLVDAEKVFDEMVHR 182


>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 840

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/82 (40%), Positives = 54/82 (65%)
 Frame = -3

Query: 247 RQSDLEQAFNPYDNSRDEAYSVLLEHCASQEALSRGKQIHAHVLKSRYVCDSLFLDTKLV 68
           +Q  L+ A + + N + E Y+ +L  C ++ A   G+++HAH++K+RY+  S+FL T+L+
Sbjct: 228 QQPLLQMALHGF-NMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYL-PSVFLRTRLI 285

Query: 67  FMYGKCGSVLDAEKVFDRMFER 2
            +Y KC S+ DA  VFD M ER
Sbjct: 286 VLYTKCDSLGDAHNVFDEMPER 307