BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008106
         (1525 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ22511.1| hypothetical protein PRUPE_ppa026098mg [Prunus pe...   676   0.0  
ref|XP_004247893.1| PREDICTED: pentatricopeptide repeat-containi...   666   0.0  
ref|XP_006360920.1| PREDICTED: pentatricopeptide repeat-containi...   662   0.0  
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   658   0.0  
gb|ESW35800.1| hypothetical protein PHAVU_001G265800g [Phaseolus...   650   0.0  
gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protei...   649   0.0  
ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containi...   643   0.0  
ref|XP_006421034.1| hypothetical protein CICLE_v10004567mg [Citr...   643   0.0  
ref|XP_006492529.1| PREDICTED: pentatricopeptide repeat-containi...   642   0.0  
ref|XP_006492528.1| PREDICTED: pentatricopeptide repeat-containi...   642   0.0  
ref|XP_003601696.1| Pentatricopeptide repeat-containing protein ...   640   0.0  
ref|XP_004297007.1| PREDICTED: pentatricopeptide repeat-containi...   639   e-180
ref|XP_004502251.1| PREDICTED: pentatricopeptide repeat-containi...   638   e-180
ref|XP_002298671.2| pentatricopeptide repeat-containing family p...   626   e-177
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   625   e-176
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi...   624   e-176
ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Caps...   602   e-169
ref|NP_193141.2| pentatricopeptide repeat-containing protein [Ar...   596   e-167
ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutr...   593   e-167
ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arab...   591   e-166

>gb|EMJ22511.1| hypothetical protein PRUPE_ppa026098mg [Prunus persica]
          Length = 610

 Score =  676 bits (1743), Expect = 0.0
 Identities = 326/462 (70%), Positives = 388/462 (83%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLPD AR  FD+I SK+++SWTA+ISGYARSGRKS+A EMF++L  KNL++WTAL
Sbjct: 149  MYAKCGLPDNARAAFDSILSKSVISWTAMISGYARSGRKSDAFEMFESLPIKNLFSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS H   AF LFIEMRREGV I+DP +LSSI         LELG+QVH LV  LG
Sbjct: 209  ISGLVQSGHSVDAFYLFIEMRREGVHIVDPLVLSSIVGACANLAVLELGKQVHSLVIRLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NAL+DMYAKCSD+ AAK IF  M +RDVVSWTSII+G AQHGQA++ALS+YD
Sbjct: 269  YESCLFISNALVDMYAKCSDILAAKDIFGRMHRRDVVSWTSIIVGAAQHGQAEKALSLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+  G+KPN VTFV L+YACSHVGL+ KG  +F+SMI +YG++PSLQHYTC LDL  RS
Sbjct: 329  EMVAVGIKPNEVTFVGLIYACSHVGLVSKGRALFRSMIEDYGISPSLQHYTCFLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L EA ++ ++MPF PDE  WA+LLSACK HGNT+MGIR+AD+LLSL P++P+T ILLS
Sbjct: 389  GHLGEASNVIDSMPFDPDEPTWAALLSACKHHGNTQMGIRVADHLLSLKPEDPATYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A MWENV++VRKLMA  E KK+PGYSCID+GKE  VFYAGE+ HPM+DE+ +LLK
Sbjct: 449  NVYAGARMWENVAEVRKLMAAREVKKKPGYSCIDIGKETQVFYAGETSHPMKDEMFSLLK 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+MRRRGY+PD+S VLHDME+QEKERQLFWHSERLAVAYGLLK+VPG VIRIVKNLR
Sbjct: 509  ELDAEMRRRGYVPDSSFVLHDMEHQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  R+IVVRDA+R+HHF+ G CSC +FW
Sbjct: 569  VCGDCHTVLKFISSIVKRDIVVRDATRYHHFSSGECSCNDFW 610



 Score =  103 bits (258), Expect = 2e-19
 Identities = 76/326 (23%), Positives = 151/326 (46%), Gaps = 32/326 (9%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            L+  Y + G   +A+ +F  +  ++  +W ++++   Q++       +F  M        
Sbjct: 44   LLDTYGKCGLVEDALHLFGEMPHRDHVSWASILTAHNQANMPHRTLSMFPAMFESDGLQP 103

Query: 1260 DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIF 1081
            D F+ +S+        A+  G+QVH   FL  +  +  V ++L+DMYAKC     A+  F
Sbjct: 104  DHFVFASVVKACSSLGAVRQGKQVHAHFFLSPFCDDDVVKSSLVDMYAKCGLPDNARAAF 163

Query: 1080 DSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM-------------------------- 979
            DS+  + V+SWT++I G A+ G+  +A  +++++                          
Sbjct: 164  DSILSKSVISWTAMISGYARSGRKSDAFEMFESLPIKNLFSWTALISGLVQSGHSVDAFY 223

Query: 978  IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDL 817
            +F  M+   V  V      +++ AC+++ +L+ G  +  S++   G    L     L+D+
Sbjct: 224  LFIEMRREGVHIVDPLVLSSIVGACANLAVLELGKQV-HSLVIRLGYESCLFISNALVDM 282

Query: 816  YGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTC 637
            Y +  ++  A+D+F  M  + D  +W S++    QHG  +  + + D ++++G K P+  
Sbjct: 283  YAKCSDILAAKDIFGRM-HRRDVVSWTSIIVGAAQHGQAEKALSLYDEMVAVGIK-PNEV 340

Query: 636  ILLSNAYAVAGMWENVSKVRKLMADM 559
              +   YA + +   VSK R L   M
Sbjct: 341  TFVGLIYACSHV-GLVSKGRALFRSM 365



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 33/305 (10%)
 Frame = -2

Query: 1140 NALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNMIFA-GM 964
            N LLD Y KC  V  A  +F  M  RD VSW SI+    Q       LS++  M  + G+
Sbjct: 42   NTLLDTYGKCGLVEDALHLFGEMPHRDHVSWASILTAHNQANMPHRTLSMFPAMFESDGL 101

Query: 963  KPNAVTFVALLYACSHVGLLDKGHDIF---------------KSMINEYG---------- 859
            +P+   F +++ ACS +G + +G  +                 S+++ Y           
Sbjct: 102  QPDHFVFASVVKACSSLGAVRQGKQVHAHFFLSPFCDDDVVKSSLVDMYAKCGLPDNARA 161

Query: 858  -----LNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKM 694
                 L+ S+  +T ++  Y RSG   +A ++F ++P K +  +W +L+S   Q G++  
Sbjct: 162  AFDSILSKSVISWTAMISGYARSGRKSDAFEMFESLPIK-NLFSWTALISGLVQSGHSVD 220

Query: 693  GIRIADNLLSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGK 514
               +   +   G       +L S   A A            +A +E  K+     I LG 
Sbjct: 221  AFYLFIEMRREGVHIVDPLVLSSIVGACAN-----------LAVLELGKQVHSLVIRLGY 269

Query: 513  EKLVFYAGESMHPMRDEIATLL--KEIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHS 340
            E  +F +  ++  M  + + +L  K+I   M RR  +  TS ++   ++ + E+ L  + 
Sbjct: 270  ESCLFIS-NALVDMYAKCSDILAAKDIFGRMHRRDVVSWTSIIVGAAQHGQAEKALSLYD 328

Query: 339  ERLAV 325
            E +AV
Sbjct: 329  EMVAV 333


>ref|XP_004247893.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Solanum lycopersicum]
          Length = 610

 Score =  666 bits (1719), Expect = 0.0
 Identities = 318/462 (68%), Positives = 389/462 (84%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLPD A+ VFD+I  KNL+  +A+ISGYAR GRK+EA  +   L +KNL  WTAL
Sbjct: 149  MYAKCGLPDNAKSVFDSILVKNLICSSAMISGYARCGRKNEAFALLGELGEKNLQCWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISG VQ+ +L  A ++F+E+RREGV + DPFILSSI        AL+LG+Q+H LV  LG
Sbjct: 209  ISGFVQNGNLIDAVDVFLEVRREGVDMRDPFILSSIVGACASLAALQLGKQIHRLVLGLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+ +LFV NAL+DMYAKCSD+  AKKIFDSM  RDVVSWTSII+GMAQHGQA EALS+YD
Sbjct: 269  YECSLFVSNALVDMYAKCSDIVEAKKIFDSMLTRDVVSWTSIIVGMAQHGQAIEALSLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +MI AG+KPN VTFV L+YACSHVGL++KG  +FKSMI++Y L+PSLQHYTCLLDLY RS
Sbjct: 329  DMILAGLKPNEVTFVGLIYACSHVGLVNKGKSLFKSMIDDYKLSPSLQHYTCLLDLYSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L++AE+L NTMPF+PDEA WA+LLSACKQHGNT+MG+R+A+ LL LGPK+PSTCILLS
Sbjct: 389  GHLEDAENLLNTMPFQPDEAVWAALLSACKQHGNTEMGVRVANRLLILGPKDPSTCILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A +W+NVSK+RK MA++E +KEPGYS ID GKE   FYAGE+++PM+D I +LLK
Sbjct: 449  NTYAGAALWDNVSKLRKQMANLEVRKEPGYSSIDSGKETTTFYAGEALYPMKDAIFSLLK 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E D++MR+RGY+PDT+ VLHDME QEKERQLFWHSERLAVAYG+L++VPG+VIR+VKNLR
Sbjct: 509  EFDSEMRKRGYLPDTTFVLHDMEQQEKERQLFWHSERLAVAYGILRTVPGSVIRVVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            +CGDCHTV+K IS I  R+IV+RDA+RFHHFN G CSC +FW
Sbjct: 569  ICGDCHTVIKFISSITSRKIVIRDANRFHHFNEGACSCNDFW 610



 Score = 94.0 bits (232), Expect = 2e-16
 Identities = 82/370 (22%), Positives = 158/370 (42%), Gaps = 37/370 (10%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MY KCGL D A  +FD +  ++L SW ++ + +  + +  + + +F+             
Sbjct: 48   MYGKCGLLDDALQLFDEMHHRDLASWASVFTAHNEANQPQKTLLLFR------------- 94

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
                           +F++  R      D F+ +S+        AL +G+QVHC      
Sbjct: 95   --------------NMFLDGLRP-----DHFVFASVVKACANSGALRVGKQVHCQFLKSV 135

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVV----------------------- 1054
            +  +  V ++L+DMYAKC     AK +FDS+  ++++                       
Sbjct: 136  FSVDDVVKSSLVDMYAKCGLPDNAKSVFDSILVKNLICSSAMISGYARCGRKNEAFALLG 195

Query: 1053 --------SWTSIIMGMAQHGQAKEALSIYDNMIFAGM-KPNAVTFVALLYACSHVGLLD 901
                     WT++I G  Q+G   +A+ ++  +   G+   +     +++ AC+ +  L 
Sbjct: 196  ELGEKNLQCWTALISGFVQNGNLIDAVDVFLEVRREGVDMRDPFILSSIVGACASLAALQ 255

Query: 900  KGHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSA 721
             G  I + ++   G   SL     L+D+Y +  ++ EA+ +F++M    D  +W S++  
Sbjct: 256  LGKQIHRLVLG-LGYECSLFVSNALVDMYAKCSDIVEAKKIFDSM-LTRDVVSWTSIIVG 313

Query: 720  CKQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAVA--GMWENVSKVRKLMADMESKK 547
              QHG     + + D+++  G K P+    +   YA +  G+      + K M D + K 
Sbjct: 314  MAQHGQAIEALSLYDDMILAGLK-PNEVTFVGLIYACSHVGLVNKGKSLFKSMID-DYKL 371

Query: 546  EPG---YSCI 526
             P    Y+C+
Sbjct: 372  SPSLQHYTCL 381



 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 44/150 (29%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
 Frame = -2

Query: 1200 GRQVHCLVFLLG-YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMA 1024
            GR++H  +  +G YD +L +CN L+DMY KC  +  A ++FD M  RD+ SW S+     
Sbjct: 22   GRKLHAHIIKIGLYDCSLKLCNNLIDMYGKCGLLDDALQLFDEMHHRDLASWASVFTAHN 81

Query: 1023 QHGQAKEALSIYDNMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINE-YGLNPS 847
            +  Q ++ L ++ NM   G++P+   F +++ AC++ G L  G  +    +   + ++  
Sbjct: 82   EANQPQKTLLLFRNMFLDGLRPDHFVFASVVKACANSGALRVGKQVHCQFLKSVFSVDDV 141

Query: 846  LQHYTCLLDLYGRSGNLDEAEDLFNTMPFK 757
            ++  + L+D+Y + G  D A+ +F+++  K
Sbjct: 142  VK--SSLVDMYAKCGLPDNAKSVFDSILVK 169


>ref|XP_006360920.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Solanum tuberosum]
          Length = 610

 Score =  662 bits (1707), Expect = 0.0
 Identities = 315/462 (68%), Positives = 389/462 (84%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLPD A+ VFD+I  KNL+  +A+ISGYAR GRK+EA  +   L +KNL  WTAL
Sbjct: 149  MYAKCGLPDNAKSVFDSILVKNLICSSAMISGYARCGRKNEAFALLGELGEKNLQCWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISG VQ+ +L  A ++F+E+RREGV + DPFILSSI        AL+LG+Q+H LV  LG
Sbjct: 209  ISGFVQNGNLIDAVDVFLEVRREGVDMRDPFILSSIVGACASLAALQLGKQIHRLVLGLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+ +LFV NAL+DMYAKCSD+  AK+IFDSM  RDVVSWTSII+GMAQHGQA EALS+YD
Sbjct: 269  YECSLFVSNALVDMYAKCSDIVEAKRIFDSMLTRDVVSWTSIIVGMAQHGQAIEALSLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +MI AG+KPN VTFV L+YACSHVGL++KG  +FKSMI +Y L+PSLQHYTCLLDL+ RS
Sbjct: 329  DMILAGLKPNEVTFVGLIYACSHVGLVNKGKSLFKSMIEDYKLSPSLQHYTCLLDLFSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L++AE+L NTMPF+PDEA WA+LLSACKQHGNT+MG+R+A++LL LGPK+PSTCILLS
Sbjct: 389  GHLEDAENLLNTMPFQPDEAVWAALLSACKQHGNTEMGVRVANHLLILGPKDPSTCILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A +W+NVSK+RK +A++E +KEPGYS ID GKE   FYAGE+++PM+D I +LLK
Sbjct: 449  NTYAGAALWDNVSKLRKQLANLEVRKEPGYSSIDSGKETTTFYAGEALYPMKDAIFSLLK 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E D++MR+RGY+PDT+ VLHDME QEKERQLFWHSERLAVAYG+L++VPG+VIR+VKNLR
Sbjct: 509  EFDSEMRKRGYIPDTTFVLHDMEQQEKERQLFWHSERLAVAYGILRTVPGSVIRVVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            +CGDCHTV+K IS I  R+IV+RDA+RFHHFN G CSC +FW
Sbjct: 569  ICGDCHTVIKFISSITNRKIVIRDANRFHHFNEGTCSCNDFW 610



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 82/370 (22%), Positives = 157/370 (42%), Gaps = 37/370 (10%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MY KCGL D A  +FD +  ++L SW ++ + +  + +  + + +F  L    L+     
Sbjct: 48   MYGKCGLLDDAFQLFDEMPQRDLASWASVFTAHNEANQPQKTLFLFPNLFLDGLWP---- 103

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
                                        D F+ +S+        AL++G+QVHC      
Sbjct: 104  ----------------------------DHFVFASVVKACANSGALKVGKQVHCQFLKSV 135

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVV----------------------- 1054
            +  +  V ++L+DMYAKC     AK +FDS+  ++++                       
Sbjct: 136  FSVDDVVKSSLVDMYAKCGLPDNAKSVFDSILVKNLICSSAMISGYARCGRKNEAFALLG 195

Query: 1053 --------SWTSIIMGMAQHGQAKEALSIYDNMIFAGM-KPNAVTFVALLYACSHVGLLD 901
                     WT++I G  Q+G   +A+ ++  +   G+   +     +++ AC+ +  L 
Sbjct: 196  ELGEKNLQCWTALISGFVQNGNLIDAVDVFLEVRREGVDMRDPFILSSIVGACASLAALQ 255

Query: 900  KGHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSA 721
             G  I + ++   G   SL     L+D+Y +  ++ EA+ +F++M    D  +W S++  
Sbjct: 256  LGKQIHRLVLG-LGYECSLFVSNALVDMYAKCSDIVEAKRIFDSM-LTRDVVSWTSIIVG 313

Query: 720  CKQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADM--ESKK 547
              QHG     + + D+++  G K P+    +   YA + +   V+K + L   M  + K 
Sbjct: 314  MAQHGQAIEALSLYDDMILAGLK-PNEVTFVGLIYACSHV-GLVNKGKSLFKSMIEDYKL 371

Query: 546  EPG---YSCI 526
             P    Y+C+
Sbjct: 372  SPSLQHYTCL 381



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 43/150 (28%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
 Frame = -2

Query: 1200 GRQVHCLVFLLG-YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMA 1024
            GR++H L+  +G Y+ +L +CN L+DMY KC  +  A ++FD M +RD+ SW S+     
Sbjct: 22   GRKLHALIIKIGLYNCSLRLCNNLIDMYGKCGLLDDAFQLFDEMPQRDLASWASVFTAHN 81

Query: 1023 QHGQAKEALSIYDNMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINE-YGLNPS 847
            +  Q ++ L ++ N+   G+ P+   F +++ AC++ G L  G  +    +   + ++  
Sbjct: 82   EANQPQKTLFLFPNLFLDGLWPDHFVFASVVKACANSGALKVGKQVHCQFLKSVFSVDDV 141

Query: 846  LQHYTCLLDLYGRSGNLDEAEDLFNTMPFK 757
            ++  + L+D+Y + G  D A+ +F+++  K
Sbjct: 142  VK--SSLVDMYAKCGLPDNAKSVFDSILVK 169


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  658 bits (1697), Expect = 0.0
 Identities = 318/462 (68%), Positives = 379/462 (82%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLPD  R+VFD+I SKN +SWTA+ISGYA+SGRK +A+++F+ +  KNL +WTAL
Sbjct: 149  MYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   +F LF+EMR +G+ I+DPFILSSI         L LG+Q+HCLV LLG
Sbjct: 209  ISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S+LFV NAL+DMYAKCSDV AAKKIF  M +RD+VSWTSII+G AQHG A+EALS+Y+
Sbjct: 269  YESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYN 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+  G+KPN VTFV L+YACSHVGL+ KG   F SMI +YG+NPSLQHYTCLLDL  RS
Sbjct: 329  RMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L+EAE+L   MPFKPDEA WA+LLSAC  H NT +GIR+AD+LLSL P++PST ILLS
Sbjct: 389  GHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A MWE+VSKVR+LMA ME KKEPGYSCI LGKE  VF AGE+ HP ++EI  LL+
Sbjct: 449  NIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLE 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+M++RGY+PDTS VLHD+E QEKERQLFWHSERLAVAYGLLK +PG V+ IVKNLR
Sbjct: 509  ELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS+I  REIVVRDA+R+HHF  G CSC  FW
Sbjct: 569  VCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610



 Score = 88.2 bits (217), Expect = 9e-15
 Identities = 67/308 (21%), Positives = 139/308 (45%), Gaps = 32/308 (10%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            LI+ Y + G   +A+ +F  L  ++  +W ++++   Q++       +F  M ++     
Sbjct: 44   LINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQP 103

Query: 1260 DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIF 1081
            D ++ + +        A++ G+QVH    +     +  V ++L+DMYAKC      + +F
Sbjct: 104  DHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVF 163

Query: 1080 DSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM-------------------------- 979
            DS+  ++ +SWT++I G AQ G+  +A+ ++  M                          
Sbjct: 164  DSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFY 223

Query: 978  IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDL 817
            +F  M+   +  V      +++ A +++ +L  G  I   ++   G   SL     L+D+
Sbjct: 224  LFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI-HCLVILLGYESSLFVSNALVDM 282

Query: 816  YGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTC 637
            Y +  ++  A+ +F  M  + D  +W S++    QHG  +  + + + +LS G K P+  
Sbjct: 283  YAKCSDVLAAKKIFGRM-VQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLK-PNEV 340

Query: 636  ILLSNAYA 613
              +   YA
Sbjct: 341  TFVGLIYA 348



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
 Frame = -2

Query: 1203 LGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMA 1024
            +G+++HC +   G D    + N L++MY KC  +  A  +F+ +  RD +SW SI+    
Sbjct: 21   IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANN 80

Query: 1023 QHGQAKEALSIYDNMIFA-GMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPS 847
            Q       LS++  M    G++P+   F  L+ AC+ +G + +G  +  + I     +  
Sbjct: 81   QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140

Query: 846  LQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRI----- 682
            +   + L+D+Y + G  D    +F+++  K +  +W +++S   Q G     I++     
Sbjct: 141  VVK-SSLVDMYAKCGLPDIGRVVFDSISSK-NSISWTAMISGYAQSGRKLDAIQLFQKMP 198

Query: 681  ADNLLS 664
              NLLS
Sbjct: 199  VKNLLS 204


>gb|ESW35800.1| hypothetical protein PHAVU_001G265800g [Phaseolus vulgaris]
          Length = 611

 Score =  650 bits (1676), Expect = 0.0
 Identities = 313/462 (67%), Positives = 370/462 (80%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAK GLPD  R VFD+I S N +SWTA+ISGYARSGRK EA ++F+    +NL+AWTAL
Sbjct: 150  MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRKLEAFQLFRQTPYRNLFAWTAL 209

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   A  +F+EMR +GV + DP +LSS+          ELG+Q+HCLV  LG
Sbjct: 210  ISGLVQSGNGFEALHMFVEMRHDGVSVTDPLVLSSVVGACSNLALWELGKQMHCLVIALG 269

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NA +DMYAKCSD+ AAK IF  M ++DVVSWTSII+G AQHGQA+EAL +YD
Sbjct: 270  YESCLFISNAFVDMYAKCSDLVAAKYIFWDMCRKDVVSWTSIIVGSAQHGQAEEALGLYD 329

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ AG+KPN VTFV L++ACSH GL+ KG  +FKSM+ +YG+ PSLQHYTCLLDL+ RS
Sbjct: 330  GMVLAGVKPNEVTFVGLIHACSHAGLVSKGRALFKSMVEDYGIKPSLQHYTCLLDLFSRS 389

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L EAE L  TMP  PDE  WA+LLSACKQHGNT+M +RIAD+LL+L P+E S+ ILLS
Sbjct: 390  GHLHEAESLIRTMPVSPDEPTWAALLSACKQHGNTQMAVRIADHLLNLKPEESSSYILLS 449

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA AGMWENVSKVRKLM  ME KKEPGYSCIDLGKE  VFYAGE+ HPM++EI  L++
Sbjct: 450  NVYAGAGMWENVSKVRKLMMVMEVKKEPGYSCIDLGKESHVFYAGETSHPMKNEIIGLVR 509

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+MR+RGY PDTS VLHDM+ QEKERQLFWHSERLAVAYGLLK+VPG +IRIVKNLR
Sbjct: 510  ELDAEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLR 569

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  REI VRDA R+HHF  G CSC +FW
Sbjct: 570  VCGDCHTVLKLISTITNREIYVRDAKRYHHFKDGSCSCHDFW 611



 Score = 88.2 bits (217), Expect = 9e-15
 Identities = 87/356 (24%), Positives = 154/356 (43%), Gaps = 35/356 (9%)
 Frame = -2

Query: 1521 YAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTALI 1342
            Y KCGL + A  +FD +  +N V+W +L++    + R   A+ + ++L            
Sbjct: 48   YGKCGLVEDAIQLFDALPRRNPVAWASLLTACNLANRPHRALSISRSL------------ 95

Query: 1341 SGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALEL--GRQVHCLVFLL 1168
                    LAA F+             D F+ +S+        AL +  G+QVH   FL 
Sbjct: 96   --------LAAGFD------------PDHFVFASLVKACSNLGALHVKQGKQVHVRFFLS 135

Query: 1167 GYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSI- 991
             +  +  V ++L+DMYAK       + +FDS+   + +SWT++I G A+ G+  EA  + 
Sbjct: 136  PFSDDDVVKSSLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRKLEAFQLF 195

Query: 990  ----YDNM---------------------IFAGMKPNAVTFV------ALLYACSHVGLL 904
                Y N+                     +F  M+ + V+        +++ ACS++ L 
Sbjct: 196  RQTPYRNLFAWTALISGLVQSGNGFEALHMFVEMRHDGVSVTDPLVLSSVVGACSNLALW 255

Query: 903  DKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLS 724
            + G  +   ++   G    L      +D+Y +  +L  A+ +F  M  + D  +W S++ 
Sbjct: 256  ELGKQM-HCLVIALGYESCLFISNAFVDMYAKCSDLVAAKYIFWDM-CRKDVVSWTSIIV 313

Query: 723  ACKQHGNTKMGIRIADNLLSLGPK-EPSTCILLSNAYAVAGMWENVSKVRKLMADM 559
               QHG  +  + + D ++  G K    T + L +A + AG+   VSK R L   M
Sbjct: 314  GSAQHGQAEEALGLYDGMVLAGVKPNEVTFVGLIHACSHAGL---VSKGRALFKSM 366



 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 36/365 (9%)
 Frame = -2

Query: 1203 LGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMA 1024
            L +++H  +   G +    + N LL  Y KC  V  A ++FD++ +R+ V+W S++    
Sbjct: 21   LVKKIHAQIIKAGLNHYEPIPNTLLHAYGKCGLVEDAIQLFDALPRRNPVAWASLLTACN 80

Query: 1023 QHGQAKEALSIYDNMIFAGMKPNAVTFVALLYACSHVGLLD----------------KGH 892
               +   ALSI  +++ AG  P+   F +L+ ACS++G L                    
Sbjct: 81   LANRPHRALSISRSLLAAGFDPDHFVFASLVKACSNLGALHVKQGKQVHVRFFLSPFSDD 140

Query: 891  DIFKS----MINEYGL------------NPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPF 760
            D+ KS    M  ++GL            + +   +T ++  Y RSG   EA  LF   P+
Sbjct: 141  DVVKSSLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRKLEAFQLFRQTPY 200

Query: 759  KPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS--NAYAVAGMWENVS 586
            + +  AW +L+S   Q GN    + +   +   G       +L S   A +   +WE   
Sbjct: 201  R-NLFAWTALISGLVQSGNGFEALHMFVEMRHDGVSVTDPLVLSSVVGACSNLALWELGK 259

Query: 585  KVRKLMADMESKKEPGY-SCIDLGKEKLVFYAGESMHPMRDEIATLLKEIDADMRRRGYM 409
            ++  L+  +      GY SC+ +    +  YA  S     D +A   K I  DM R+  +
Sbjct: 260  QMHCLVIAL------GYESCLFISNAFVDMYAKCS-----DLVAA--KYIFWDMCRKDVV 306

Query: 408  PDTSCVLHDMEYQEKERQLFWHSERLAVAYGL-LKSVPGAVIRIVKNLRVCGDCHTVLKS 232
              TS ++   ++ + E       E L +  G+ L  V    +  V  +  C     V K 
Sbjct: 307  SWTSIIVGSAQHGQAE-------EALGLYDGMVLAGVKPNEVTFVGLIHACSHAGLVSKG 359

Query: 231  ISLIK 217
             +L K
Sbjct: 360  RALFK 364


>gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 610

 Score =  649 bits (1673), Expect = 0.0
 Identities = 310/462 (67%), Positives = 375/462 (81%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLP++ R+VFD+I  KN+ SWTA++ GYAR GRK EA+E+F  +  KNL+AWT+L
Sbjct: 149  MYAKCGLPEEGRVVFDSIKLKNMASWTAMLYGYARKGRKKEALELFLRVPLKNLFAWTSL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   AF LFIEMRREGV I+DP +LSSI         LELG+QVH LV  LG
Sbjct: 209  ISGLVQSGNEVDAFGLFIEMRREGVTIIDPLVLSSIIGASANLAMLELGKQVHGLVIGLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S +F+ NAL+DMYAKCSD+ AA+ +F  M ++DVVSWTS+I+G AQHGQA+EALS+YD
Sbjct: 269  YESCMFISNALVDMYAKCSDILAARDVFSKMLQKDVVSWTSMIVGAAQHGQAEEALSLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+  G+KPN VTFV L+YACSHVGL+++G ++FKSM  +YG++PSLQHYTCLLDL GRS
Sbjct: 329  KMVSLGVKPNEVTFVGLIYACSHVGLVNRGRELFKSMTEDYGIHPSLQHYTCLLDLLGRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G LDEAE++ N+MPFKPDE  WA+LLSACK HGN KM IR+AD+LLSL P+EPS+ ILLS
Sbjct: 389  GYLDEAENIINSMPFKPDEPTWAALLSACKHHGNAKMAIRVADHLLSLKPEEPSSYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N Y+ + +WE+ SK R L+  M+ K++PGYS +D GKE  VFYAGE+ HPM+ EI  LLK
Sbjct: 449  NIYSSSSLWEHASKARHLLEAMDVKRDPGYSYVDFGKESQVFYAGETSHPMKAEIFGLLK 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
             +D +MRRRGY+PDTSCVLH+ME QEKERQLFWHSERLAVAYGLLK VPG VIRIVKNLR
Sbjct: 509  VLDVEMRRRGYVPDTSCVLHNMEQQEKERQLFWHSERLAVAYGLLKGVPGTVIRIVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  REIVVRDA R+HHF  G CSC +FW
Sbjct: 569  VCGDCHTVLKFISNIAKREIVVRDAKRYHHFKDGNCSCNDFW 610



 Score =  102 bits (253), Expect = 6e-19
 Identities = 86/392 (21%), Positives = 173/392 (44%), Gaps = 32/392 (8%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            LI+ YA+     EA+++F  +  ++  +W  +++   Q++       LF  M      + 
Sbjct: 44   LINVYAKCSLLQEAIQLFDEMPQRDHVSWATVLTAHNQANFPDKTLSLFPSMFSLDRLLP 103

Query: 1260 DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIF 1081
            D F+ +S+        A++ G+QVH    +  +  +  V ++L+DMYAKC      + +F
Sbjct: 104  DDFVFASLVKACASLGAVKQGKQVHANYLVSPFFDDDVVKSSLVDMYAKCGLPEEGRVVF 163

Query: 1080 DSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM-------------------------- 979
            DS+  +++ SWT+++ G A+ G+ KEAL ++  +                          
Sbjct: 164  DSIKLKNMASWTAMLYGYARKGRKKEALELFLRVPLKNLFAWTSLISGLVQSGNEVDAFG 223

Query: 978  IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDL 817
            +F  M+   VT +      +++ A +++ +L+ G  +   +I   G    +     L+D+
Sbjct: 224  LFIEMRREGVTIIDPLVLSSIIGASANLAMLELGKQVHGLVIG-LGYESCMFISNALVDM 282

Query: 816  YGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTC 637
            Y +  ++  A D+F+ M  + D  +W S++    QHG  +  + + D ++SLG K P+  
Sbjct: 283  YAKCSDILAARDVFSKM-LQKDVVSWTSMIVGAAQHGQAEEALSLYDKMVSLGVK-PNEV 340

Query: 636  ILLSNAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIA 457
              +   YA + +   V++ R+L   M           D G           +HP      
Sbjct: 341  TFVGLIYACSHV-GLVNRGRELFKSMTE---------DYG-----------IHPSLQHYT 379

Query: 456  TLLKEIDADMRRRGYMPDTSCVLHDMEYQEKE 361
             LL  +     R GY+ +   +++ M ++  E
Sbjct: 380  CLLDLLG----RSGYLDEAENIINSMPFKPDE 407



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 31/196 (15%)
 Frame = -2

Query: 1197 RQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQH 1018
            +Q+H     LG   +  V N L+++YAKCS +  A ++FD M +RD VSW +++    Q 
Sbjct: 23   KQLHAHFIKLGLTHSSPVLNTLINVYAKCSLLQEAIQLFDEMPQRDHVSWATVLTAHNQA 82

Query: 1017 GQAKEALSIYDNMI-FAGMKPNAVTFVALLYACSHVGLLDKG--------------HDIF 883
                + LS++ +M     + P+   F +L+ AC+ +G + +G               D+ 
Sbjct: 83   NFPDKTLSLFPSMFSLDRLLPDDFVFASLVKACASLGAVKQGKQVHANYLVSPFFDDDVV 142

Query: 882  KS----MINEYGLN------------PSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPD 751
            KS    M  + GL              ++  +T +L  Y R G   EA +LF  +P K +
Sbjct: 143  KSSLVDMYAKCGLPEEGRVVFDSIKLKNMASWTAMLYGYARKGRKKEALELFLRVPLK-N 201

Query: 750  EAAWASLLSACKQHGN 703
              AW SL+S   Q GN
Sbjct: 202  LFAWTSLISGLVQSGN 217


>ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Glycine max]
          Length = 611

 Score =  643 bits (1659), Expect = 0.0
 Identities = 307/462 (66%), Positives = 372/462 (80%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAK GLPD  R VFD+I S N +SWT +ISGYARSGRK EA  +F+    +NL+AWTAL
Sbjct: 150  MYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTAL 209

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   AF LF+EMR EG+ + DP +LSS+          ELG+Q+H +V  LG
Sbjct: 210  ISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLG 269

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NAL+DMYAKCSD+ AAK IF  M ++DVVSWTSII+G AQHGQA+EAL++YD
Sbjct: 270  YESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYD 329

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ AG+KPN VTFV L++ACSH GL+ KG  +F++M+ ++G++PSLQHYTCLLDL+ RS
Sbjct: 330  EMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRS 389

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L  TMP  PDE  WA+LLS+CK+HGNT+M +RIAD+LL+L P++PS+ ILLS
Sbjct: 390  GHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLS 449

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA AGMWE+VSKVRKLM  +E+KK PGYSCIDLGK   VFYAGE+ HPMRDEI  L++
Sbjct: 450  NIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMR 509

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+D +MR+RGY PDTS VLHDM+ QEKERQLFWHSERLAVAYGLLK+VPG VIRIVKNLR
Sbjct: 510  ELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLR 569

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  REI VRDA R+HHF  G CSC +FW
Sbjct: 570  VCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611



 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 35/329 (10%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            L++ Y + G   +A+++F  L  ++  AW +L++    S+    A  +   +   G    
Sbjct: 44   LLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHP- 102

Query: 1260 DPFILSSIXXXXXXXXALEL--GRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKK 1087
            D F+ +S+         L +  G+QVH   FL  +  +  V ++L+DMYAK       + 
Sbjct: 103  DHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRA 162

Query: 1086 IFDSMWKRDVVSWTSIIMGMAQHGQAKEALSI-----YDNM------------------- 979
            +FDS+   + +SWT++I G A+ G+  EA  +     Y N+                   
Sbjct: 163  VFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDA 222

Query: 978  --IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLL 823
              +F  M+   ++        +++ AC+++ L + G  +   +I   G    L     L+
Sbjct: 223  FHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVIT-LGYESCLFISNALI 281

Query: 822  DLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPK-EP 646
            D+Y +  +L  A+ +F  M  + D  +W S++    QHG  +  + + D ++  G K   
Sbjct: 282  DMYAKCSDLVAAKYIFCEM-CRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNE 340

Query: 645  STCILLSNAYAVAGMWENVSKVRKLMADM 559
             T + L +A + AG+   VSK R L   M
Sbjct: 341  VTFVGLIHACSHAGL---VSKGRTLFRTM 366



 Score = 78.6 bits (192), Expect = 7e-12
 Identities = 84/364 (23%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
 Frame = -2

Query: 1203 LGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMA 1024
            L +++H  +   G + +  + N LL+ Y KC  +  A ++FD++ +RD V+W S++    
Sbjct: 21   LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80

Query: 1023 QHGQAKEALSIYDNMIFAGMKPNAVTFVALLYACSHVGLLD----------------KGH 892
               +   ALSI  +++  G  P+   F +L+ AC+++G+L                    
Sbjct: 81   LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140

Query: 891  DIFKS----MINEYGL------------NPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPF 760
            D+ KS    M  ++GL            + +   +T ++  Y RSG   EA  LF   P+
Sbjct: 141  DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200

Query: 759  KPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS--NAYAVAGMWENVS 586
            + +  AW +L+S   Q GN      +   +   G       +L S   A A   +WE   
Sbjct: 201  R-NLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK 259

Query: 585  KVRKLMADMESKKEPGY-SCIDLGKEKLVFYAGESMHPMRDEIATLLKEIDADMRRRGYM 409
            ++  ++  +      GY SC+ +    +  YA  S     D +A   K I  +M R+  +
Sbjct: 260  QMHGVVITL------GYESCLFISNALIDMYAKCS-----DLVAA--KYIFCEMCRKDVV 306

Query: 408  PDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLRVCGDCHTVLKSI 229
              TS ++   ++ + E  L  + E       +L  V    +  V  +  C     V K  
Sbjct: 307  SWTSIIVGTAQHGQAEEALALYDEM------VLAGVKPNEVTFVGLIHACSHAGLVSKGR 360

Query: 228  SLIK 217
            +L +
Sbjct: 361  TLFR 364


>ref|XP_006421034.1| hypothetical protein CICLE_v10004567mg [Citrus clementina]
            gi|557522907|gb|ESR34274.1| hypothetical protein
            CICLE_v10004567mg [Citrus clementina]
          Length = 610

 Score =  643 bits (1658), Expect = 0.0
 Identities = 309/462 (66%), Positives = 375/462 (81%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLP+ AR VFD+I  KN VSWTA++S YARSGRK +A+++F+    +NL+ WTAL
Sbjct: 149  MYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMKIFEQAPVRNLFLWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            +SGLVQS +   AF+ FIEMRREGV I+DP +LSSI         LELG+Q+H LV  LG
Sbjct: 209  VSGLVQSRNEIDAFDSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NA++DMYAKCSD+ AAK IF  M ++DVVSWTSII+G AQHGQA+E L++YD
Sbjct: 269  YESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ AG+KPN VTFV L+YACSHVGL+ KG  +FKSMI +YG+ PSLQHYTCLLDL  RS
Sbjct: 329  EMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L   MPF+PDE  WA+LLSACK H NT+MG R+A++LLSL P++PS+ ILLS
Sbjct: 389  GHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A MW++VSKVRKLM+ ME KKEPGYS I+ GK   +FYAGE+ HP++DEI  LL 
Sbjct: 449  NVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLT 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+M+RRGY+PDTS VLHDME +EKERQLFWHSERLAVAYGLLKSVPG V+R+VKNLR
Sbjct: 509  ELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCH V+K IS I  REIVVRDA+R+HHF  G CSC +FW
Sbjct: 569  VCGDCHIVMKMISNITKREIVVRDATRYHHFKDGKCSCNDFW 610



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 32/353 (9%)
 Frame = -2

Query: 1521 YAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTALI 1342
            Y KC L   A  + + +  ++ VSW ++++ Y ++    + + +F T+          L 
Sbjct: 48   YGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTM----------LA 97

Query: 1341 SGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLGY 1162
               +Q  H                     F+ +S+           LG+QVH    L  +
Sbjct: 98   LDKLQPDH---------------------FVFASLVKACGSLGTTRLGKQVHACFVLSPF 136

Query: 1161 DSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDN 982
              +  V ++L+DMYAKC   + A+ +FDS+  ++ VSWT+++   A+ G+ K+A+ I++ 
Sbjct: 137  CDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMKIFEQ 196

Query: 981  M--------------------------IFAGMKPNAVTFV------ALLYACSHVGLLDK 898
                                        F  M+   V  V      +++ AC++  +L+ 
Sbjct: 197  APVRNLFLWTALVSGLVQSRNEIDAFDSFIEMRREGVDIVDPLVLSSIVGACANFAVLEL 256

Query: 897  GHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSAC 718
            G  I   ++   G    L     ++D+Y +  ++  A+D+F  M  K D  +W S++   
Sbjct: 257  GKQI-HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRK-DVVSWTSIIVGT 314

Query: 717  KQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADM 559
             QHG  +  + + D ++S G K P+    +   YA + +   V K RKL   M
Sbjct: 315  AQHGQAEETLALYDEMVSAGVK-PNEVTFVGLIYACSHV-GLVGKGRKLFKSM 365



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 33/323 (10%)
 Frame = -2

Query: 1197 RQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQH 1018
            + +H  +  LG      + N L+D Y KC  V  A  + + M +RD VSW SI+    Q 
Sbjct: 23   KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82

Query: 1017 GQAKEALSIYDNMI-FAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQ 841
               ++ +SI+  M+    ++P+   F +L+ AC  +G    G  +    +    L+P   
Sbjct: 83   NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGTTRLGKQVHACFV----LSPFCD 138

Query: 840  H---YTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNL 670
                 + L+D+Y + G  + A  +F+++  K +  +W ++LSA  + G  K  ++I +  
Sbjct: 139  DDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSAYARSGRKKDAMKIFE-- 195

Query: 669  LSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADMESKKE-----------------P 541
                 + P   + L  A  V+G+ ++ +++    + +E ++E                  
Sbjct: 196  -----QAPVRNLFLWTA-LVSGLVQSRNEIDAFDSFIEMRREGVDIVDPLVLSSIVGACA 249

Query: 540  GYSCIDLGKE--KLVFYAG-ESMHPMRDEIATL---------LKEIDADMRRRGYMPDTS 397
             ++ ++LGK+   LV   G ES   + + I  +          K+I   MRR+  +  TS
Sbjct: 250  NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309

Query: 396  CVLHDMEYQEKERQLFWHSERLA 328
             ++   ++ + E  L  + E ++
Sbjct: 310  IIVGTAQHGQAEETLALYDEMVS 332


>ref|XP_006492529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 610

 Score =  642 bits (1656), Expect = 0.0
 Identities = 309/462 (66%), Positives = 374/462 (80%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLP+ AR VFD+I  KN VSWTA++S YARSGRK +A+E+F+    +NL+ WTAL
Sbjct: 149  MYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            +SGLVQS +   AF  FIEMRREGV I+DP +LSSI         LELG+Q+H LV  LG
Sbjct: 209  VSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NA++DMYAKCSD+ AAK IF  M ++DVVSWTSII+G AQHGQA+E L++YD
Sbjct: 269  YESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ AG+KPN VTFV L+YACSHVGL+ KG  +FKSMI +YG+ PSLQHYTCLLDL  RS
Sbjct: 329  EMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L   MPF+PDE  WA+LLSACK H NT+MG R+A++LLSL P++PS+ ILLS
Sbjct: 389  GHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A MW++VSKVRKLM+ ME KKEPGYS I+ GK   +FYAGE+ HP++DEI  LL 
Sbjct: 449  NVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLT 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+M+RRGY+PDTS V+HDME +EKERQLFWHSERLAVAYGLLKSVPG V+R+VKNLR
Sbjct: 509  ELDAEMKRRGYVPDTSSVVHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCH V+K IS I  REIVVRDA+R+HHF  G CSC +FW
Sbjct: 569  VCGDCHIVMKMISSITKREIVVRDATRYHHFKDGKCSCNDFW 610



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 81/353 (22%), Positives = 151/353 (42%), Gaps = 32/353 (9%)
 Frame = -2

Query: 1521 YAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTALI 1342
            Y KC L   A  + + +  ++ VSW ++++ Y ++    + + +F T+          L 
Sbjct: 48   YGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTM----------LA 97

Query: 1341 SGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLGY 1162
               +Q  H                     F+ +S+        A  LG+QVH    L  +
Sbjct: 98   LDKLQPDH---------------------FVFASLVKACGSLGATRLGKQVHACFVLSPF 136

Query: 1161 DSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDN 982
              +  V ++L+DMYAKC   + A+ +FDS+  ++ VSWT+++   A+ G+ K+A+ I++ 
Sbjct: 137  CDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ 196

Query: 981  --------------------------MIFAGMKPNAVTFV------ALLYACSHVGLLDK 898
                                        F  M+   V  V      +++ AC++  +L+ 
Sbjct: 197  APVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLEL 256

Query: 897  GHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSAC 718
            G  I   ++   G    L     ++D+Y +  ++  A+D+F  M  K D  +W S++   
Sbjct: 257  GKQI-HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRK-DVVSWTSIIVGT 314

Query: 717  KQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADM 559
             QHG  +  + + D ++S G K P+    +   YA + +   V K RKL   M
Sbjct: 315  AQHGQAEETLALYDEMVSAGVK-PNEVTFVGLIYACSHV-GLVGKGRKLFKSM 365



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 33/323 (10%)
 Frame = -2

Query: 1197 RQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQH 1018
            + +H  +  LG      + N L+D Y KC  V  A  + + M +RD VSW SI+    Q 
Sbjct: 23   KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82

Query: 1017 GQAKEALSIYDNMI-FAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQ 841
               ++ +SI+  M+    ++P+   F +L+ AC  +G    G  +    +    L+P   
Sbjct: 83   NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFV----LSPFCD 138

Query: 840  H---YTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNL 670
                 + L+D+Y + G  + A  +F+++  K +  +W ++LSA  + G  K  + I +  
Sbjct: 139  DDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSAYARSGRKKDAMEIFE-- 195

Query: 669  LSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADMESKKE-----------------P 541
                 + P   + L  A  V+G+ ++ +++    + +E ++E                  
Sbjct: 196  -----QAPVRNLFLWTA-LVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249

Query: 540  GYSCIDLGKE--KLVFYAG-ESMHPMRDEIATL---------LKEIDADMRRRGYMPDTS 397
             ++ ++LGK+   LV   G ES   + + I  +          K+I   MRR+  +  TS
Sbjct: 250  NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309

Query: 396  CVLHDMEYQEKERQLFWHSERLA 328
             ++   ++ + E  L  + E ++
Sbjct: 310  IIVGTAQHGQAEETLALYDEMVS 332


>ref|XP_006492528.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 623

 Score =  642 bits (1656), Expect = 0.0
 Identities = 309/462 (66%), Positives = 374/462 (80%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLP+ AR VFD+I  KN VSWTA++S YARSGRK +A+E+F+    +NL+ WTAL
Sbjct: 149  MYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            +SGLVQS +   AF  FIEMRREGV I+DP +LSSI         LELG+Q+H LV  LG
Sbjct: 209  VSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NA++DMYAKCSD+ AAK IF  M ++DVVSWTSII+G AQHGQA+E L++YD
Sbjct: 269  YESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ AG+KPN VTFV L+YACSHVGL+ KG  +FKSMI +YG+ PSLQHYTCLLDL  RS
Sbjct: 329  EMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L   MPF+PDE  WA+LLSACK H NT+MG R+A++LLSL P++PS+ ILLS
Sbjct: 389  GHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA A MW++VSKVRKLM+ ME KKEPGYS I+ GK   +FYAGE+ HP++DEI  LL 
Sbjct: 449  NVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLT 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+M+RRGY+PDTS V+HDME +EKERQLFWHSERLAVAYGLLKSVPG V+R+VKNLR
Sbjct: 509  ELDAEMKRRGYVPDTSSVVHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCH V+K IS I  REIVVRDA+R+HHF  G CSC +FW
Sbjct: 569  VCGDCHIVMKMISSITKREIVVRDATRYHHFKDGKCSCNDFW 610



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 81/353 (22%), Positives = 151/353 (42%), Gaps = 32/353 (9%)
 Frame = -2

Query: 1521 YAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTALI 1342
            Y KC L   A  + + +  ++ VSW ++++ Y ++    + + +F T+          L 
Sbjct: 48   YGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTM----------LA 97

Query: 1341 SGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLGY 1162
               +Q  H                     F+ +S+        A  LG+QVH    L  +
Sbjct: 98   LDKLQPDH---------------------FVFASLVKACGSLGATRLGKQVHACFVLSPF 136

Query: 1161 DSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDN 982
              +  V ++L+DMYAKC   + A+ +FDS+  ++ VSWT+++   A+ G+ K+A+ I++ 
Sbjct: 137  CDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ 196

Query: 981  --------------------------MIFAGMKPNAVTFV------ALLYACSHVGLLDK 898
                                        F  M+   V  V      +++ AC++  +L+ 
Sbjct: 197  APVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLEL 256

Query: 897  GHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSAC 718
            G  I   ++   G    L     ++D+Y +  ++  A+D+F  M  K D  +W S++   
Sbjct: 257  GKQI-HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRK-DVVSWTSIIVGT 314

Query: 717  KQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADM 559
             QHG  +  + + D ++S G K P+    +   YA + +   V K RKL   M
Sbjct: 315  AQHGQAEETLALYDEMVSAGVK-PNEVTFVGLIYACSHV-GLVGKGRKLFKSM 365



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 33/323 (10%)
 Frame = -2

Query: 1197 RQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQH 1018
            + +H  +  LG      + N L+D Y KC  V  A  + + M +RD VSW SI+    Q 
Sbjct: 23   KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82

Query: 1017 GQAKEALSIYDNMI-FAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQ 841
               ++ +SI+  M+    ++P+   F +L+ AC  +G    G  +    +    L+P   
Sbjct: 83   NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFV----LSPFCD 138

Query: 840  H---YTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNL 670
                 + L+D+Y + G  + A  +F+++  K +  +W ++LSA  + G  K  + I +  
Sbjct: 139  DDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSAYARSGRKKDAMEIFE-- 195

Query: 669  LSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADMESKKE-----------------P 541
                 + P   + L  A  V+G+ ++ +++    + +E ++E                  
Sbjct: 196  -----QAPVRNLFLWTA-LVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249

Query: 540  GYSCIDLGKE--KLVFYAG-ESMHPMRDEIATL---------LKEIDADMRRRGYMPDTS 397
             ++ ++LGK+   LV   G ES   + + I  +          K+I   MRR+  +  TS
Sbjct: 250  NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309

Query: 396  CVLHDMEYQEKERQLFWHSERLA 328
             ++   ++ + E  L  + E ++
Sbjct: 310  IIVGTAQHGQAEETLALYDEMVS 332


>ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355490744|gb|AES71947.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  640 bits (1650), Expect = 0.0
 Identities = 312/462 (67%), Positives = 369/462 (79%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAK  LPD  R VFD+I   + +SWTA+ISGYARSGRK EA+E+F+    KNLYAWTAL
Sbjct: 155  MYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTAL 214

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   A  LF+EMRREGV I DP +LSS+          ELG+QVHC+V  LG
Sbjct: 215  ISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLG 274

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NAL+DMYAKCSDV AAK IF  M ++DVVSWTSII+G AQHG A+EAL++YD
Sbjct: 275  YESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYD 334

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +M+ AG+KPN VTFV L+YACSHVGL+ KG  +FKSM+ ++G+ PSLQHYTCLLDL+ RS
Sbjct: 335  DMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRS 394

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L  TMP KPDE  WA+LLSACK HGNTKM +RIAD+LL L P++PS+ ILLS
Sbjct: 395  GHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLS 454

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA AGMWENVS VRKLMA  E KK PGYSC+DLG+E  VF+AGE+  PM+DEI  L+ 
Sbjct: 455  NIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMT 514

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            ++D++MRRRGY+PDTS VL DM+ QEKERQLFWHSERLA+AYGLLK+VPG  IRIVKNLR
Sbjct: 515  KLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLR 574

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  REI VRD  R+HHF  G CSC +FW
Sbjct: 575  VCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 34/328 (10%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            LI  Y + G   +A+++F  L  ++  AW  ++S    S+    AF + + +  EG+   
Sbjct: 49   LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQP- 107

Query: 1260 DPFILSSIXXXXXXXXAL--ELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKK 1087
            D F+ SS+        ++  +LG+Q+H    L  +  +  V ++L+DMYAK       + 
Sbjct: 108  DHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRA 167

Query: 1086 IFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDN------------------------- 982
            +FDS+++   +SWT++I G A+ G+  EAL ++                           
Sbjct: 168  VFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDA 227

Query: 981  -MIFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLL 823
              +F  M+   V+        +++ AC++  + + G  +   +I   G    L     L+
Sbjct: 228  LYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVIT-LGYESCLFISNALV 286

Query: 822  DLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPS 643
            D+Y +  ++  A+ +F  M  K D  +W S++    QHG  +  + + D+++  G K P+
Sbjct: 287  DMYAKCSDVVAAKYIFCEMRRK-DVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVK-PN 344

Query: 642  TCILLSNAYAVAGMWENVSKVRKLMADM 559
                +   YA + +   VSK R L   M
Sbjct: 345  EVTFVGLIYACSHV-GLVSKGRALFKSM 371


>ref|XP_004297007.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 610

 Score =  639 bits (1647), Expect = e-180
 Identities = 308/462 (66%), Positives = 375/462 (81%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MY KCGLPD AR VFD+ G K++V+WTAL+SGYARSGRK +A+EMF  +  K+L++WTAL
Sbjct: 149  MYVKCGLPDNARAVFDSSGEKSVVAWTALVSGYARSGRKKDALEMFGKMPVKSLFSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   A  LFIEMRRE V I+DP +LSS          LELG+QVH LV  LG
Sbjct: 209  ISGLVQSGNGVDALYLFIEMRRERVDIVDPLVLSSTVGACANLAVLELGKQVHGLVIRLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y S LFV NAL+DMYAKCSD+ AA+ IF  M ++DVVSWTSII+G AQHG+A EAL++YD
Sbjct: 269  YGSCLFVSNALVDMYAKCSDILAARDIFGGMQRKDVVSWTSIIVGAAQHGRAVEALTLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ AG+KPN VTFV L+YACSHVG + KG  IF+SMI +YG+ P LQHYTC LDL  RS
Sbjct: 329  GMVEAGIKPNEVTFVGLIYACSHVGFVSKGRAIFRSMIEDYGIRPCLQHYTCFLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L EA ++ ++MPF+PDE  WA+LLSACK HG+T+MGIR+AD+LLSL P++PS+ ILLS
Sbjct: 389  GHLVEALNVISSMPFEPDEPTWAALLSACKHHGDTQMGIRVADHLLSLNPEDPSSYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA AGMW+NV+KVR LM + E KK PGYS ID+GKE  VFYAGE+ HP++D+I  LLK
Sbjct: 449  NVYAGAGMWQNVAKVRTLMTEREVKKNPGYSSIDVGKESQVFYAGETSHPLKDDIFGLLK 508

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+MR+RGY+PD+S VLHDME QEKERQLFWHSERLA+AYGLLK+VPG  IRIVKNLR
Sbjct: 509  ELDAEMRKRGYVPDSSFVLHDMEQQEKERQLFWHSERLALAYGLLKAVPGTPIRIVKNLR 568

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  R+I+VRDA+R+HHF++G CSC +FW
Sbjct: 569  VCGDCHTVLKFISSIVKRDIIVRDATRYHHFSKGECSCNDFW 610



 Score =  103 bits (258), Expect = 2e-19
 Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 32/326 (9%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            L+  YA+ G   +A+ +F  +  ++   W +L++ L Q++       +F  M +    + 
Sbjct: 44   LLHVYAKCGLLQDALHLFDEMPHRDHVTWASLLTALNQANLSHRTLSIFPTMFQSDSLLP 103

Query: 1260 DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIF 1081
            D F+ +S+        AL  G+QVH    L  +  +    ++L+DMY KC     A+ +F
Sbjct: 104  DHFVFASLVKACSSLGALRQGKQVHARFMLSPFCGDDVAKSSLVDMYVKCGLPDNARAVF 163

Query: 1080 DSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM-------------------------- 979
            DS  ++ VV+WT+++ G A+ G+ K+AL ++  M                          
Sbjct: 164  DSSGEKSVVAWTALVSGYARSGRKKDALEMFGKMPVKSLFSWTALISGLVQSGNGVDALY 223

Query: 978  IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDL 817
            +F  M+   V  V      + + AC+++ +L+ G  +   ++   G    L     L+D+
Sbjct: 224  LFIEMRRERVDIVDPLVLSSTVGACANLAVLELGKQV-HGLVIRLGYGSCLFVSNALVDM 282

Query: 816  YGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTC 637
            Y +  ++  A D+F  M  K D  +W S++    QHG     + + D ++  G K P+  
Sbjct: 283  YAKCSDILAARDIFGGMQRK-DVVSWTSIIVGAAQHGRAVEALTLYDGMVEAGIK-PNEV 340

Query: 636  ILLSNAYAVAGMWENVSKVRKLMADM 559
              +   YA + +   VSK R +   M
Sbjct: 341  TFVGLIYACSHV-GFVSKGRAIFRSM 365



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 31/177 (17%)
 Frame = -2

Query: 1140 NALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNMIFA-GM 964
            N LL +YAKC  +  A  +FD M  RD V+W S++  + Q   +   LSI+  M  +  +
Sbjct: 42   NTLLHVYAKCGLLQDALHLFDEMPHRDHVTWASLLTALNQANLSHRTLSIFPTMFQSDSL 101

Query: 963  KPNAVTFVALLYACSHVGLLDKGHDIF---------------KSMINEY---GL------ 856
             P+   F +L+ ACS +G L +G  +                 S+++ Y   GL      
Sbjct: 102  LPDHFVFASLVKACSSLGALRQGKQVHARFMLSPFCGDDVAKSSLVDMYVKCGLPDNARA 161

Query: 855  ------NPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGN 703
                    S+  +T L+  Y RSG   +A ++F  MP K    +W +L+S   Q GN
Sbjct: 162  VFDSSGEKSVVAWTALVSGYARSGRKKDALEMFGKMPVK-SLFSWTALISGLVQSGN 217


>ref|XP_004502251.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like isoform X1 [Cicer arietinum]
            gi|502135197|ref|XP_004502252.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like isoform X2 [Cicer arietinum]
            gi|502135202|ref|XP_004502253.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like isoform X3 [Cicer arietinum]
            gi|502135205|ref|XP_004502254.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like isoform X4 [Cicer arietinum]
          Length = 616

 Score =  638 bits (1645), Expect = e-180
 Identities = 310/462 (67%), Positives = 370/462 (80%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAK  LPD  R VFD+I S N + WTA+ISGYARSGRK+EA  MF+    +NLYAWTAL
Sbjct: 155  MYAKFELPDYGRAVFDSIYSLNSICWTAMISGYARSGRKAEAFRMFRQSPFRNLYAWTAL 214

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +   A  LF+EMRREG+ I DP +LSS+           LG+Q+H +V  LG
Sbjct: 215  ISGLVQSGNANDALYLFVEMRREGISITDPLVLSSVVGACANSAVWVLGKQMHSVVITLG 274

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NAL+DMYAKCSD+ AAK IF+ M ++DVVSWTSII+G AQHG A+EAL++YD
Sbjct: 275  YESCLFISNALVDMYAKCSDLVAAKCIFNKMRRKDVVSWTSIIVGTAQHGLAEEALALYD 334

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +M+ AG+KPN VTFV L+YACSHVGL+ KG  +FKSM+ ++G+ PSLQHYTCLLDL+ RS
Sbjct: 335  DMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRS 394

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE +  TMP KPDE  WA+LLSACK HGNT+M +RIAD+LL L P++PS  ILLS
Sbjct: 395  GHLDEAERIVRTMPVKPDEPTWAALLSACKHHGNTQMAVRIADHLLELIPEDPSCYILLS 454

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA AGMWENVSKVRKLMA  E KKEPGYS IDLGKE  VFYAGE+ H M+DE+  LL+
Sbjct: 455  NVYAGAGMWENVSKVRKLMAVKEVKKEPGYSGIDLGKESQVFYAGETSHSMKDEMLGLLR 514

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            ++DA+MR+RGY+PDTS VLHDM+ QEKE+QLFWHSERLA+AYGLLK+VPG +IRIVKNLR
Sbjct: 515  KLDAEMRKRGYVPDTSSVLHDMDQQEKEKQLFWHSERLALAYGLLKAVPGTIIRIVKNLR 574

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            VCGDCHTVLK IS I  REI VRDA R+HHF  G CSC +FW
Sbjct: 575  VCGDCHTVLKLISTITSREIYVRDAKRYHHFKDGNCSCNDFW 616



 Score = 88.2 bits (217), Expect = 9e-15
 Identities = 76/327 (23%), Positives = 147/327 (44%), Gaps = 6/327 (1%)
 Frame = -2

Query: 1521 YAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTALI 1342
            Y KCGL   A  +FD +  ++ V+W  ++S    S     A+ + +++  +       + 
Sbjct: 53   YGKCGLLQDALQLFDALPHRDHVAWATILSACNLSNLPHRAISLSRSILHEGFQPDHFVF 112

Query: 1341 SGLVQSSHLAAAFELFIEMRREGVGILDPF-----ILSSIXXXXXXXXALELGRQVHCLV 1177
            S L+++     +F +    +     +L PF     + SS+          + GR V   +
Sbjct: 113  SSLIKACANLGSFHIKQGKQLHARFLLSPFSDDDVVKSSLVDMYAKFELPDYGRAVFDSI 172

Query: 1176 FLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEAL 997
                Y  N     A++  YA+    + A ++F     R++ +WT++I G+ Q G A +AL
Sbjct: 173  ----YSLNSICWTAMISGYARSGRKAEAFRMFRQSPFRNLYAWTALISGLVQSGNANDAL 228

Query: 996  SIYDNMIFAGMK-PNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLD 820
             ++  M   G+   + +   +++ AC++  +   G  +  S++   G    L     L+D
Sbjct: 229  YLFVEMRREGISITDPLVLSSVVGACANSAVWVLGKQM-HSVVITLGYESCLFISNALVD 287

Query: 819  LYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPST 640
            +Y +  +L  A+ +FN M  K D  +W S++    QHG  +  + + D+++  G K P+ 
Sbjct: 288  MYAKCSDLVAAKCIFNKMRRK-DVVSWTSIIVGTAQHGLAEEALALYDDMVLAGVK-PNE 345

Query: 639  CILLSNAYAVAGMWENVSKVRKLMADM 559
               +   YA + +   VSK R L   M
Sbjct: 346  VTFVGLIYACSHV-GLVSKGRALFKSM 371


>ref|XP_002298671.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550348740|gb|EEE83476.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 634

 Score =  626 bits (1614), Expect = e-177
 Identities = 305/462 (66%), Positives = 364/462 (78%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGLP  AR VFD+I  K  VSWTA++SGYARSG K EA+E+F     +NLY+WTAL
Sbjct: 173  MYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTAL 232

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGLVQS +      +FIEMRREGV I+DP +LSS+         L LG+Q+H LV   G
Sbjct: 233  ISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSG 292

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            Y+S LF+ NAL+DMYAKCSD+ AA+ +F+ M  RDVVSWTSII+G AQHG+AKEAL +YD
Sbjct: 293  YESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYD 352

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ A +KPN VTFV L+YACSH GL+ KG  +FK+MI +Y ++PSLQ +TC LDL  RS
Sbjct: 353  QMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRS 412

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+L+EAEDL  TMP KPDE  WA+LLSACK HGNT+MG+RIAD LLSL   EPST +LLS
Sbjct: 413  GHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLS 472

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLLK 445
            N YA AG WE +S+VRKLM DME K++PGYS IDLGKE  VF+AGE+ HPM+DEI  LLK
Sbjct: 473  NVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLK 532

Query: 444  EIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNLR 265
            E+DA+MR+RGY+PDTS VLHDME QEKER+LFWHSER AVAYGLLK+VPG VIRIVKNLR
Sbjct: 533  ELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLR 592

Query: 264  VCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            +CGDCHT LK  S I  +EI+VRDA+R+HHF  G CSC +FW
Sbjct: 593  ICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 634



 Score = 95.9 bits (237), Expect = 4e-17
 Identities = 86/355 (24%), Positives = 154/355 (43%), Gaps = 34/355 (9%)
 Frame = -2

Query: 1521 YAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTALI 1342
            Y KC L   A  +FD +  ++ VSW ++++ Y ++   ++ + +F        Y +T   
Sbjct: 72   YGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFH-------YMFT--- 121

Query: 1341 SGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLGY 1162
            +  +Q  H                     F+ +++        +L LG+QVH    L  +
Sbjct: 122  TDRLQPDH---------------------FVYATLLKACASLCSLRLGKQVHARFVLSPF 160

Query: 1161 DSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIY-- 988
              +  V ++L+DMYAKC   S A+ +FDS+  +  VSWT+++ G A+ G   EA+ ++  
Sbjct: 161  VDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLR 220

Query: 987  ------------------------DNMIFAGMKPNAVTFV------ALLYACSHVGLLDK 898
                                       +F  M+   V  V      +++ AC+++ +L  
Sbjct: 221  TPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGL 280

Query: 897  GHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSAC 718
            G  I   +I   G    L     L+D+Y +  ++  A ++FN M  + D  +W S++   
Sbjct: 281  GKQIHGLVIGS-GYESCLFISNALVDMYAKCSDILAARNVFNRMLHR-DVVSWTSIIVGA 338

Query: 717  KQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAV--AGMWENVSKVRKLMADM 559
             QHG  K  + + D ++ L   +P+    +   YA   AG+   VSK RKL   M
Sbjct: 339  AQHGRAKEALDLYDQMV-LAEIKPNEVTFVGLIYACSHAGL---VSKGRKLFKAM 389



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
 Frame = -2

Query: 1197 RQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQH 1018
            +++H  +   G +    + N LLD Y KC+ +  A  +FD M +RD VSW SI+    Q 
Sbjct: 47   KKLHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQA 106

Query: 1017 GQAKEALSIYDNMIFAG-MKPNAVTFVALLYACSHVGLLDKG--------------HDIF 883
                + LSI+  M     ++P+   +  LL AC+ +  L  G               D+ 
Sbjct: 107  KLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVV 166

Query: 882  KS----MINEYGLNPSLQH-------------YTCLLDLYGRSGNLDEAEDLFNTMPFKP 754
            KS    M  + GL PS+               +T +L  Y RSG  DEA +LF   P + 
Sbjct: 167  KSSLVDMYAKCGL-PSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVR- 224

Query: 753  DEAAWASLLSACKQHG 706
            +  +W +L+S   Q G
Sbjct: 225  NLYSWTALISGLVQSG 240


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  625 bits (1612), Expect = e-176
 Identities = 299/463 (64%), Positives = 373/463 (80%), Gaps = 1/463 (0%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MY KCG PD+AR VFD+I  KN VSWT++ISGYARSGRK EA+++F     +NL++WTAL
Sbjct: 149  MYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGL+QS H   +F LF EMRREG+ I+DP +LSS+         LELG+Q+H LV  LG
Sbjct: 209  ISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            ++S LF+ NAL+DMYAKCSD+ AAK IF  M ++DV+SWTSII+G AQHG+A+EAL++YD
Sbjct: 269  FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ + +KPN VTFV LLYACSH GL+ +G ++F+SM  +Y +NPSLQHYTCLLDL  RS
Sbjct: 329  EMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L + +PFKPDE  WASLLSAC +H N +MG+RIAD +L L P++PST ILLS
Sbjct: 389  GHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESM-HPMRDEIATLL 448
            N YA A MW +VSKVRKLM+ ME +KEPGYS ID GK+  VF+AGES  HPM++EI  LL
Sbjct: 449  NVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLL 508

Query: 447  KEIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNL 268
            K++DA+MR+RGY+P+TS VL+D+E QEKE+QLFWHSERLAVAYGLLK+VPG +IRIVKNL
Sbjct: 509  KDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNL 568

Query: 267  RVCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            R+CGDCH VLK IS I  REI+VRDA+R+HHF  G CSC +FW
Sbjct: 569  RICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  101 bits (251), Expect = 1e-18
 Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 34/356 (9%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            +Y KCGL  QA  +FD + +++ VSW ++++ + ++      + M  T+   +       
Sbjct: 47   VYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHD------- 99

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
              GL                        D F+ + I         L LG+QVH    L  
Sbjct: 100  --GLQP----------------------DHFVFACIVRACSSLGYLRLGKQVHARFMLSX 135

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEAL---- 997
            +  +  V ++L+DMY KC     A+ +FDS+  ++ VSWTS+I G A+ G+  EA+    
Sbjct: 136  FCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFL 195

Query: 996  ----------------------SIYDNMIFAGMKPNAVTFV------ALLYACSHVGLLD 901
                                   IY   +F  M+   +  V      +++  C+++ LL+
Sbjct: 196  QAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLE 255

Query: 900  KGHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSA 721
             G  I   ++   G    L     L+D+Y +  ++  A+D+F  MP K D  +W S++  
Sbjct: 256  LGKQI-HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK-DVISWTSIIVG 313

Query: 720  CKQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAV--AGMWENVSKVRKLMADM 559
              QHG  +  + + D ++ L   +P+    +   YA   AG+   VS+ R+L   M
Sbjct: 314  TAQHGKAEEALTLYDEMV-LSRIKPNEVTFVGLLYACSHAGL---VSRGRELFRSM 365



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
 Frame = -2

Query: 1194 QVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHG 1015
            ++H  +   G+D +  + N LLD+Y KC  +  A ++FD M  RD VSW SI+    +  
Sbjct: 24   ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 1014 QAKEALSIYDNMI-FAGMKPNAVTFVALLYACSHVGLLDKGHDIF-KSMINEYGLNPSLQ 841
              +  LS+ + M    G++P+   F  ++ ACS +G L  G  +  + M++ +  +  ++
Sbjct: 84   IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143

Query: 840  HYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHG 706
              + L+D+Y + G  DEA  +F+++ FK +  +W S++S   + G
Sbjct: 144  --SSLIDMYTKCGQPDEARAVFDSILFK-NSVSWTSMISGYARSG 185


>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  624 bits (1610), Expect = e-176
 Identities = 299/463 (64%), Positives = 372/463 (80%), Gaps = 1/463 (0%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MY KCG PD AR VFD+I  KN VSWT++ISGYARSGRK EA+++F     +NL++WTAL
Sbjct: 149  MYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISGL+QS H   +F LF EMRREG+ I+DP +LSS+         LELG+Q+H LV  LG
Sbjct: 209  ISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            ++S LF+ NAL+DMYAKCSD+ AAK IF  M ++DV+SWTSII+G AQHG+A+EAL++YD
Sbjct: 269  FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+ + +KPN VTFV LLYACSH GL+ +G ++F+SM  +Y +NPSLQHYTCLLDL  RS
Sbjct: 329  EMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLS 625
            G+LDEAE+L + +PFKPDE  WASLLSAC +H N +MG+RIAD +L L P++PST ILLS
Sbjct: 389  GHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLS 448

Query: 624  NAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESM-HPMRDEIATLL 448
            N YA A MW +VSKVRKLM+ ME +KEPGYS ID GK+  VF+AGES  HPM++EI  LL
Sbjct: 449  NVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLL 508

Query: 447  KEIDADMRRRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKNL 268
            K++DA+MR+RGY+P+TS VL+D+E QEKE+QLFWHSERLAVAYGLLK+VPG +IRIVKNL
Sbjct: 509  KDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNL 568

Query: 267  RVCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            R+CGDCH VLK IS I  REI+VRDA+R+HHF  G CSC +FW
Sbjct: 569  RICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  100 bits (248), Expect = 2e-18
 Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 34/356 (9%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            +Y KCGL  QA  +FD + +++ VSW ++++ + ++      + M  T+   +       
Sbjct: 47   VYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHD------- 99

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
              GL                        D F+ + I         L LG+QVH    L  
Sbjct: 100  --GLQP----------------------DHFVFACIVRACSSLGYLRLGKQVHARFMLSF 135

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEAL---- 997
            +  +  V ++L+DMY KC     A+ +FDS+  ++ VSWTS+I G A+ G+  EA+    
Sbjct: 136  FCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFL 195

Query: 996  ----------------------SIYDNMIFAGMKPNAVTFV------ALLYACSHVGLLD 901
                                   IY   +F  M+   +  V      +++  C+++ LL+
Sbjct: 196  QAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLE 255

Query: 900  KGHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSA 721
             G  I   ++   G    L     L+D+Y +  ++  A+D+F  MP K D  +W S++  
Sbjct: 256  LGKQI-HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK-DVISWTSIIVG 313

Query: 720  CKQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAV--AGMWENVSKVRKLMADM 559
              QHG  +  + + D ++ L   +P+    +   YA   AG+   VS+ R+L   M
Sbjct: 314  TAQHGKAEEALTLYDEMV-LSRIKPNEVTFVGLLYACSHAGL---VSRGRELFRSM 365



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 46/164 (28%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
 Frame = -2

Query: 1194 QVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHG 1015
            ++H  +   G+D +  + N LLD+Y KC  +  A ++FD M  RD VSW SI+    +  
Sbjct: 24   ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 1014 QAKEALSIYDNMI-FAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQH 838
              +  LS+ + M    G++P+   F  ++ ACS +G L  G  +    +  +  +  +  
Sbjct: 84   IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143

Query: 837  YTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHG 706
             + L+D+Y + G  D+A  +F+++ FK +  +W S++S   + G
Sbjct: 144  -SSLIDMYTKCGQPDDARAVFDSILFK-NSVSWTSMISGYARSG 185


>ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Capsella rubella]
            gi|482552060|gb|EOA16253.1| hypothetical protein
            CARUB_v10004398mg [Capsella rubella]
          Length = 612

 Score =  602 bits (1552), Expect = e-169
 Identities = 295/464 (63%), Positives = 365/464 (78%), Gaps = 2/464 (0%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGL D A+ VF++I  KN +SWTA++SGYA+SGRK EA+E+F+ L  KNLY+WTAL
Sbjct: 149  MYAKCGLLDSAKAVFESIRVKNTISWTAMVSGYAKSGRKEEALELFRKLPAKNLYSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISG VQS     AF +F EMRRE V ILDP +LSSI        A   GRQVH LV  LG
Sbjct: 209  ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIGLG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            +DS +F+ NAL+DMYAKCSDV AAK IF  M  RDVVSWTS+I+GMAQHGQA++AL++YD
Sbjct: 269  FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALAVYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +M+  G+KPN VTFV L+YACSHVG + KG  +F+SM  +YG+ PSLQHYTCLLDL+GRS
Sbjct: 329  DMVSHGVKPNEVTFVGLIYACSHVGFVVKGRALFQSMTKDYGIRPSLQHYTCLLDLFGRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLS-LGPKEPSTCILL 628
            G LDEAE+L +TMPF PDE  WA+LLSACK+ G  +MG+RIAD+L+S   PK+PST ILL
Sbjct: 389  GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSCFKPKDPSTYILL 448

Query: 627  SNAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLL 448
            SN YA A +W  VS+ R+ + DME +K+PGYS +++ KE  VFYAGE+ HP++++I  LL
Sbjct: 449  SNIYASASLWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHPLKEDIFRLL 508

Query: 447  KEIDADMRRR-GYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKN 271
            K+++ +MR+R GY+PDTS +LHDM+ QEKE+ LFWHSER AVAYGLLK+VPG  IRIVKN
Sbjct: 509  KKLEGEMRKRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKN 568

Query: 270  LRVCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            LRVCGDCH VLK IS I  REI+VRDA+R+HHF  G CSC +FW
Sbjct: 569  LRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612



 Score =  111 bits (278), Expect = 7e-22
 Identities = 74/309 (23%), Positives = 152/309 (49%), Gaps = 33/309 (10%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            L++ Y + G  S A+++F  +  ++  AW ++++ L Q++       +F  +    VG+ 
Sbjct: 44   LVNVYGKCGAASYALKLFDEMPQRDHIAWASVLTALNQANLSGKTLSVFSSVG-SSVGLR 102

Query: 1260 -DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKI 1084
             D F+ S++        ++E G+QVHC   +  Y S+  V ++L+DMYAKC  + +AK +
Sbjct: 103  PDDFVFSALVKACANLGSIEHGKQVHCHFLVSEYSSDDVVKSSLVDMYAKCGLLDSAKAV 162

Query: 1083 FDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM------------------------- 979
            F+S+  ++ +SWT+++ G A+ G+ +EAL ++  +                         
Sbjct: 163  FESIRVKNTISWTAMVSGYAKSGRKEEALELFRKLPAKNLYSWTALISGFVQSGKGLEAF 222

Query: 978  -IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLD 820
             +F  M+   V  +      +++ AC+++     G  +   +I   G +  +     L+D
Sbjct: 223  SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIG-LGFDSCVFISNALID 281

Query: 819  LYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPST 640
            +Y +  ++  A+D+F+ M  + D  +W SL+    QHG  +  + + D+++S G K P+ 
Sbjct: 282  MYAKCSDVIAAKDIFSRMRHR-DVVSWTSLIVGMAQHGQAEKALAVYDDMVSHGVK-PNE 339

Query: 639  CILLSNAYA 613
               +   YA
Sbjct: 340  VTFVGLIYA 348



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 46/178 (25%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
 Frame = -2

Query: 1209 LELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMG 1030
            L  G+ +H  +  LG      + N L+++Y KC   S A K+FD M +RD ++W S++  
Sbjct: 19   LTTGKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASYALKLFDEMPQRDHIAWASVLTA 78

Query: 1029 MAQHGQAKEALSIYDNM-IFAGMKPNAVTFVALLYACSHVGLLDKGHDIF-KSMINEYGL 856
            + Q   + + LS++ ++    G++P+   F AL+ AC+++G ++ G  +    +++EY  
Sbjct: 79   LNQANLSGKTLSVFSSVGSSVGLRPDDFVFSALVKACANLGSIEHGKQVHCHFLVSEYSS 138

Query: 855  NPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRI 682
            +  ++  + L+D+Y + G LD A+ +F ++  K +  +W +++S   + G  +  + +
Sbjct: 139  DDVVK--SSLVDMYAKCGLLDSAKAVFESIRVK-NTISWTAMVSGYAKSGRKEEALEL 193


>ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635650|sp|O23266.3|PP308_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g14050, mitochondrial; Flags: Precursor
            gi|332657965|gb|AEE83365.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  596 bits (1536), Expect = e-167
 Identities = 293/464 (63%), Positives = 364/464 (78%), Gaps = 2/464 (0%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKCGL + A+ VFD+I  KN +SWTA++SGYA+SGRK EA+E+F+ L  KNLY+WTAL
Sbjct: 149  MYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTAL 208

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISG VQS     AF +F EMRRE V ILDP +LSSI        A   GRQVH LV  LG
Sbjct: 209  ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 268

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            +DS +F+ NAL+DMYAKCSDV AAK IF  M  RDVVSWTS+I+GMAQHGQA++AL++YD
Sbjct: 269  FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 328

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +M+  G+KPN VTFV L+YACSHVG ++KG ++F+SM  +YG+ PSLQHYTCLLDL GRS
Sbjct: 329  DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLL-SLGPKEPSTCILL 628
            G LDEAE+L +TMPF PDE  WA+LLSACK+ G  +MGIRIAD+L+ S   K+PST ILL
Sbjct: 389  GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448

Query: 627  SNAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLL 448
            SN YA A +W  VS+ R+ + +ME +K+PG+S +++ KE  VFYAGE+ HP++++I  LL
Sbjct: 449  SNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 508

Query: 447  KEIDADMR-RRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKN 271
            K+++ +MR R GY+PDTS +LHDM+ QEKE+ LFWHSER AVAYGLLK+VPG  IRIVKN
Sbjct: 509  KKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKN 568

Query: 270  LRVCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            LRVCGDCH VLK IS I  REI+VRDA+R+HHF  G CSC +FW
Sbjct: 569  LRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612



 Score =  112 bits (281), Expect = 3e-22
 Identities = 86/364 (23%), Positives = 174/364 (47%), Gaps = 41/364 (11%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            L++ Y + G  S A+++F  +  ++  AW ++++ L Q++       +F  +        
Sbjct: 44   LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103

Query: 1260 DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIF 1081
            D F+ S++        +++ GRQVHC   +  Y ++  V ++L+DMYAKC  +++AK +F
Sbjct: 104  DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163

Query: 1080 DSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM-------------------------- 979
            DS+  ++ +SWT+++ G A+ G+ +EAL ++  +                          
Sbjct: 164  DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223

Query: 978  IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDL 817
            +F  M+   V  +      +++ AC+++     G  +   ++   G +  +     L+D+
Sbjct: 224  VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV-HGLVIALGFDSCVFISNALIDM 282

Query: 816  YGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPSTC 637
            Y +  ++  A+D+F+ M  + D  +W SL+    QHG  +  + + D+++S G K P+  
Sbjct: 283  YAKCSDVIAAKDIFSRMRHR-DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVK-PNEV 340

Query: 636  ILLSNAYAVAGMWENVSKVRKLMADMESKKEPG-------YSCI--DLGKEKLVFYAGES 484
              +   YA + +   V K R+L   M   K+ G       Y+C+   LG+  L+  A   
Sbjct: 341  TFVGLIYACSHV-GFVEKGRELFQSM--TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397

Query: 483  MHPM 472
            +H M
Sbjct: 398  IHTM 401



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 44/178 (24%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
 Frame = -2

Query: 1209 LELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMG 1030
            L   + +H  +  LG      + N L+++Y KC   S A ++FD M  RD ++W S++  
Sbjct: 19   LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78

Query: 1029 MAQHGQAKEALSIYDNM-IFAGMKPNAVTFVALLYACSHVGLLDKGHDIF-KSMINEYGL 856
            + Q   + + LS++ ++   +G++P+   F AL+ AC+++G +D G  +    +++EY  
Sbjct: 79   LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138

Query: 855  NPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRI 682
            +  ++  + L+D+Y + G L+ A+ +F+++  K +  +W +++S   + G  +  + +
Sbjct: 139  DEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRKEEALEL 193


>ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutrema salsugineum]
            gi|557115989|gb|ESQ56272.1| hypothetical protein
            EUTSA_v10024703mg [Eutrema salsugineum]
          Length = 609

 Score =  593 bits (1528), Expect = e-167
 Identities = 294/464 (63%), Positives = 357/464 (76%), Gaps = 2/464 (0%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKC   D A+ VFD+I  KN +SWTA++SG+ARSGRK EA+E+F+ L  KNLY+WTAL
Sbjct: 146  MYAKCDSLDMAKAVFDSIRVKNTISWTAMVSGFARSGRKEEALELFRELPAKNLYSWTAL 205

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISG VQS     AF +F EMRRE V ILDP +LSSI        A   GRQVH LV  LG
Sbjct: 206  ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVISLG 265

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            +DS +F+ NAL+DMYAKCSDV AA+ IF  M  RDVVSWTS+I+GMAQHG+A++ALS+YD
Sbjct: 266  FDSCVFISNALIDMYAKCSDVIAAEDIFSRMRHRDVVSWTSLIVGMAQHGRAEKALSLYD 325

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
            +M+  G+KPN VTFV L+YACSHVG + KG +IF++M  +Y + PSLQHYTCLLDL GRS
Sbjct: 326  DMVSHGVKPNEVTFVGLIYACSHVGFVSKGREIFQAMTEDYRIRPSLQHYTCLLDLLGRS 385

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLS-LGPKEPSTCILL 628
            G LDEAE L +TMPF PDE  WA+LLSACK+ G  +MG+RIAD LLS   PK+PST ILL
Sbjct: 386  GLLDEAESLIHTMPFPPDEPTWAALLSACKRQGKGQMGVRIADLLLSRFKPKDPSTYILL 445

Query: 627  SNAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLL 448
            SN YA A  W  VS+ R+ + DME +K+PGYS +++ KE  VFYAGE+ HP+++EI  LL
Sbjct: 446  SNVYASASSWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHPLKEEIFGLL 505

Query: 447  KEIDADMRRR-GYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKN 271
            +E++ +MRRR GY+PDTS +LHDM+ QEKE+ LFWHSER AVAYGLLK VPG  IRIVKN
Sbjct: 506  RELEEEMRRRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKGVPGTPIRIVKN 565

Query: 270  LRVCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEFW 139
            LRVCGDCH  LK +S I  REI+VRDA+RFHHF  G CSC +FW
Sbjct: 566  LRVCGDCHVFLKHVSEITGREIIVRDATRFHHFRGGKCSCNDFW 609



 Score =  114 bits (286), Expect = 9e-23
 Identities = 88/363 (24%), Positives = 172/363 (47%), Gaps = 40/363 (11%)
 Frame = -2

Query: 1440 LISGYARSGRKSEAVEMFKTLKDKNLYAWTALISGLVQSSHLAAAFELFIEMRREGVGIL 1261
            L++ Y + G  S A+++F  +  ++  AW ++++ L QS+       LF        G+ 
Sbjct: 44   LVNVYGKCGSASHALKLFDEMPHRDHIAWASVLTALNQSNLSGKTLSLF----SSSSGLC 99

Query: 1260 -DPFILSSIXXXXXXXXALELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKI 1084
             D F+ S++        ++  G+QVHC   +  Y  +  V ++L+DMYAKC  +  AK +
Sbjct: 100  PDDFVFSALVKACANLGSVNHGKQVHCRFIVSEYSHDDVVKSSLVDMYAKCDSLDMAKAV 159

Query: 1083 FDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYDNM------------------------- 979
            FDS+  ++ +SWT+++ G A+ G+ +EAL ++  +                         
Sbjct: 160  FDSIRVKNTISWTAMVSGFARSGRKEEALELFRELPAKNLYSWTALISGFVQSGKGLEAF 219

Query: 978  -IFAGMKPNAVTFV------ALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLD 820
             +F  M+   V  +      +++ AC+++     G  +   ++   G +  +     L+D
Sbjct: 220  SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV-HGLVISLGFDSCVFISNALID 278

Query: 819  LYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLLSLGPKEPST 640
            +Y +  ++  AED+F+ M  + D  +W SL+    QHG  +  + + D+++S G K P+ 
Sbjct: 279  MYAKCSDVIAAEDIFSRMRHR-DVVSWTSLIVGMAQHGRAEKALSLYDDMVSHGVK-PNE 336

Query: 639  CILLSNAYAVAGMWENVSKVRKLMADM--ESKKEPG---YSCI--DLGKEKLVFYAGESM 481
               +   YA + +   VSK R++   M  + +  P    Y+C+   LG+  L+  A   +
Sbjct: 337  VTFVGLIYACSHV-GFVSKGREIFQAMTEDYRIRPSLQHYTCLLDLLGRSGLLDEAESLI 395

Query: 480  HPM 472
            H M
Sbjct: 396  HTM 398



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 44/177 (24%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
 Frame = -2

Query: 1209 LELGRQVHCLVFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMG 1030
            L   + +H  +F +G      + N L+++Y KC   S A K+FD M  RD ++W S++  
Sbjct: 19   LNTAKSLHAQIFKIGIIQCCPLANTLVNVYGKCGSASHALKLFDEMPHRDHIAWASVLTA 78

Query: 1029 MAQHGQAKEALSIYDNMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIF-KSMINEYGLN 853
            + Q   + + LS++ +   +G+ P+   F AL+ AC+++G ++ G  +  + +++EY  +
Sbjct: 79   LNQSNLSGKTLSLFSSS--SGLCPDDFVFSALVKACANLGSVNHGKQVHCRFIVSEYSHD 136

Query: 852  PSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRI 682
              ++  + L+D+Y +  +LD A+ +F+++  K +  +W +++S   + G  +  + +
Sbjct: 137  DVVK--SSLVDMYAKCDSLDMAKAVFDSIRVK-NTISWTAMVSGFARSGRKEEALEL 190


>ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
            lyrata] gi|297314154|gb|EFH44577.1| hypothetical protein
            ARALYDRAFT_330113 [Arabidopsis lyrata subsp. lyrata]
          Length = 1057

 Score =  591 bits (1524), Expect = e-166
 Identities = 293/463 (63%), Positives = 360/463 (77%), Gaps = 2/463 (0%)
 Frame = -2

Query: 1524 MYAKCGLPDQARLVFDTIGSKNLVSWTALISGYARSGRKSEAVEMFKTLKDKNLYAWTAL 1345
            MYAKC L D A+ VFD+I  KN +SWTA++SGYA+SGRK EA+E+F+ L  KNLY+WTAL
Sbjct: 86   MYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTAL 145

Query: 1344 ISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCLVFLLG 1165
            ISG VQS     AF +F EMRRE V ILDP +LSSI        A   GRQVH LV  LG
Sbjct: 146  ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 205

Query: 1164 YDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEALSIYD 985
            +DS +F+ NAL+DMYAKCSDV AAK IF  M  RDVVSWTS+I+GMAQHGQA++AL++YD
Sbjct: 206  FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 265

Query: 984  NMIFAGMKPNAVTFVALLYACSHVGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRS 805
             M+  G+KPN VTFV L+YACSHVG + KG ++F+SM  +YG+ PSLQHYTCLLDL GRS
Sbjct: 266  EMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 325

Query: 804  GNLDEAEDLFNTMPFKPDEAAWASLLSACKQHGNTKMGIRIADNLL-SLGPKEPSTCILL 628
            G LDEAE+L +TMPF PDE  WA+LLSACK+ G  +MG+RIAD+L+ S  PK+PST ILL
Sbjct: 326  GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILL 385

Query: 627  SNAYAVAGMWENVSKVRKLMADMESKKEPGYSCIDLGKEKLVFYAGESMHPMRDEIATLL 448
            SN YA A +W  VS+ R+ + DME +K+PGYS +++ KE  VFYAGE+ H ++++I  LL
Sbjct: 386  SNIYASASLWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLL 445

Query: 447  KEIDADMR-RRGYMPDTSCVLHDMEYQEKERQLFWHSERLAVAYGLLKSVPGAVIRIVKN 271
            K+++ +MR R GY+PDTS +LHDM+ QEKE+ LFWHSER AVAYGLLK+VPG  IRIVKN
Sbjct: 446  KKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKN 505

Query: 270  LRVCGDCHTVLKSISLIKVREIVVRDASRFHHFNRGVCSCGEF 142
            LRVCGDCH VLK IS I  REI+VRDA+R+HHF  G CSC +F
Sbjct: 506  LRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 548



 Score =  100 bits (250), Expect = 1e-18
 Identities = 80/337 (23%), Positives = 158/337 (46%), Gaps = 41/337 (12%)
 Frame = -2

Query: 1359 AWTALISGLVQSSHLAAAFELFIEMRREGVGILDPFILSSIXXXXXXXXALELGRQVHCL 1180
            AW ++++ L Q++       +F  +        D F+ S++        +++LG+QVHC 
Sbjct: 8    AWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKLGKQVHCH 67

Query: 1179 VFLLGYDSNLFVCNALLDMYAKCSDVSAAKKIFDSMWKRDVVSWTSIIMGMAQHGQAKEA 1000
              +  Y ++  V ++L+DMYAKC  +  AK +FDS+  ++ +SWT+++ G A+ G+ +EA
Sbjct: 68   FIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 127

Query: 999  LSIYDNM--------------------------IFAGMKPNAVTFV------ALLYACSH 916
            L ++  +                          +F  M+   V  +      +++ AC++
Sbjct: 128  LELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 187

Query: 915  VGLLDKGHDIFKSMINEYGLNPSLQHYTCLLDLYGRSGNLDEAEDLFNTMPFKPDEAAWA 736
            +     G  +   ++   G +  +     L+D+Y +  ++  A+D+F+ M  + D  +W 
Sbjct: 188  LAASIAGRQV-HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR-DVVSWT 245

Query: 735  SLLSACKQHGNTKMGIRIADNLLSLGPKEPSTCILLSNAYAVAGMWENVSKVRKLMADME 556
            SL+    QHG  +  + + D ++S G K P+    +   YA + +   V+K R+L   M 
Sbjct: 246  SLIVGMAQHGQAEKALALYDEMVSHGVK-PNEVTFVGLIYACSHV-GFVAKGRELFQSM- 302

Query: 555  SKKEPG-------YSCI--DLGKEKLVFYAGESMHPM 472
              K+ G       Y+C+   LG+  L+  A   +H M
Sbjct: 303  -TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 338