BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008067
         (2533 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   714   0.0  
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   712   0.0  
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        712   0.0  
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   710   0.0  
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   709   0.0  
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              703   0.0  
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   700   0.0  
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     682   0.0  
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   675   0.0  
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   670   0.0  
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   669   0.0  
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   659   0.0  
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   633   e-178
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   622   e-175
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      619   e-174
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   619   e-174
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   617   e-173
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   610   e-171
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab...   606   e-170
ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-...   605   e-170

>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  714 bits (1842), Expect = 0.0
 Identities = 392/617 (63%), Positives = 447/617 (72%), Gaps = 5/617 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKS---HHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX 535
            MSCLLPQFKC PDTF++ F++   H H ++  SK +EP   RT C+L             
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVL------------- 70

Query: 536  LEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTY 715
                            STT     P TST MT VLD+EKL+L S++A+S+ +AA+R WTY
Sbjct: 71   ----------------STTS----PSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTY 110

Query: 716  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 895
             GA G S E NLG + ATE L TS                           +M+++ N +
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 896  KSDSKET-DVPSDANTFMFESIMPYQLAERVSAIG-SKDDEIGPGKSQSSECPLTESHDV 1069
            K  SK    + +D NT M+  +      ER S IG S   E  P +  S + PL +S D+
Sbjct: 170  KPKSKPAISLSADTNTSMWAQLTE---RERASIIGDSVIVEAAPEEEYSEQQPLNKSADL 226

Query: 1070 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1249
            EPT       + Q+S +I VRS                   NV+SVKSGST R++R S+Q
Sbjct: 227  EPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQ 286

Query: 1250 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1429
            +VDYSDPLRYLR TTSSSRLLTA EE QLSAGIQDLLKLE L+  L+ERCG  PTFAQWA
Sbjct: 287  EVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWA 346

Query: 1430 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1609
            AAAGVDQ+ LRRRLNYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 347  AAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 406

Query: 1610 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1789
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 407  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 466

Query: 1790 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1969
            RHP++EEVAEATGLSMKRL AV+LTPKAPRSLDQK GINQNLKPSEVIADPEAETAEDLL
Sbjct: 467  RHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLL 526

Query: 1970 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2149
            IK+FM++DLEKVLD+LNPRE+QV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 527  IKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 586

Query: 2150 RKLKNKRRTKHLQQYLV 2200
            RKLKNK+RTKHL QY +
Sbjct: 587  RKLKNKKRTKHLMQYAI 603


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  712 bits (1838), Expect = 0.0
 Identities = 394/619 (63%), Positives = 446/619 (72%), Gaps = 6/619 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX-LE 541
            MS LLPQF  LPD F +  K+   +  QLSK R+  ++RTQCIL              L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 542  IEKLRLPSLEPNSNSTT-DGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYT 718
            IEKL+LPS+E  SNS   + SWK P++ T T V D++KLKL S +AN   +A  RPWTYT
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAAT-TTVPDIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 719  GATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSK 898
            GA G   E N       EN + S                           M++   NL+ 
Sbjct: 120  GAVGPPAEANT----KPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLND 175

Query: 899  SDSKETDVPSDANTFMFESIMPYQLAER----VSAIGSKDDEIGPGKSQSSECPLTESHD 1066
            SD+      S+A T  FES+   Q  E     V A  +  +    G S   E  LT+S D
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRET-LTDSDD 234

Query: 1067 VEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSI 1246
            +EP+       Q+QLS  I V+S                   NVV+VKSGST RK+R+S+
Sbjct: 235  LEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASV 294

Query: 1247 QDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQW 1426
            QDVDYSDPLRYLRGTT SSRLLTA+EE +LS GIQDLLKLERLQVELTERCG +PTF QW
Sbjct: 295  QDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQW 354

Query: 1427 AAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 1606
            AAAAGVDQ TLR+RLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVR
Sbjct: 355  AAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 414

Query: 1607 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTEN 1786
            GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+KQL TEN
Sbjct: 415  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTEN 474

Query: 1787 GRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDL 1966
            GRHP+D EVAEA GLSMKRL+AVMLTPKAPRSLDQKIG N++LKPSEV+ADPEAET+E++
Sbjct: 475  GRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEI 534

Query: 1967 LIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 2146
            L KQFMRQDLEKVLD+LNPREKQV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 535  LTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 594

Query: 2147 FRKLKNKRRTKHLQQYLVA 2203
            FRKLKNK+RTK LQQY+ A
Sbjct: 595  FRKLKNKKRTKFLQQYINA 613


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  712 bits (1837), Expect = 0.0
 Identities = 398/626 (63%), Positives = 449/626 (71%), Gaps = 13/626 (2%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHH-HSATQLSKGREPEYIRTQCI---LXXXXXXXXXXXX 532
            MSCLLPQFKC PDTF++ F++HH H       G    +   QC    L            
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 533  XLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWT 712
             L   K  +        STT  S    TSTT TAVLD+EKL+L S +A+ + +A  RPWT
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSS----TSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWT 116

Query: 713  YTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNL 892
            Y GATG   E +LGA  AT+NL+TS                           +M  N N 
Sbjct: 117  YIGATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNY 176

Query: 893  SKSDSKETDVPSDANTFMFESIMPYQLAERVSAIG-SKDDEIGPGKSQSSECPLTESHDV 1069
            +K++ K + V    ++F  +  + +  AER   IG S  DE    +  S +   TES ++
Sbjct: 177  AKTEMK-SGVSFATDSFTSKWAL-FTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDEL 234

Query: 1070 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1249
            EPT       + QLS +I VRS                   NVVSVKSGST RKRR ++Q
Sbjct: 235  EPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQ 294

Query: 1250 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1429
            DVDYSDPLRYLRGTTS+SRLLTA EE +LS GIQDLLKLERLQ EL ERCG +PTFAQWA
Sbjct: 295  DVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWA 354

Query: 1430 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1609
            AAAGVDQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 355  AAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 414

Query: 1610 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1789
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 415  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 474

Query: 1790 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPS--------EVIADPE 1945
            RHPD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQNLKPS        EVIADPE
Sbjct: 475  RHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPE 534

Query: 1946 AETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERI 2125
            AETAED+LIKQFMR+DLEKVLDSL+ RE+QVIRWRFG+EDGRMKTLQEIGELMGVSRERI
Sbjct: 535  AETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERI 594

Query: 2126 RQIESCAFRKLKNKRRTKHLQQYLVA 2203
            RQIESCAFRKLKNK+RTKHLQQYL++
Sbjct: 595  RQIESCAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  710 bits (1832), Expect = 0.0
 Identities = 392/619 (63%), Positives = 446/619 (72%), Gaps = 6/619 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX-LE 541
            MS LLPQF  LPD F +  K+   +  QLSK R+  ++RTQCIL              L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 542  IEKLRLPSLEPNSNSTT-DGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYT 718
            IEKL+LPS+E  SNS   + SWK P++ T T V  ++KLKL S +AN   +A  RPWTYT
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAAT-TTVPGIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 719  GATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSK 898
            GA G   E N       E+ + S                           M++   NL  
Sbjct: 120  GAVGPPAEANT----KPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKD 175

Query: 899  SDSKETDVPSDANTFMFESIMPYQLAER----VSAIGSKDDEIGPGKSQSSECPLTESHD 1066
            SD+      S+A T  FES+   Q  E     V A  +  +    G S   +  LT+S D
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDT-LTDSDD 234

Query: 1067 VEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSI 1246
            +EP+       Q+QLS  I V+S                   NVVSVKSGST RK+R+S+
Sbjct: 235  LEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASV 294

Query: 1247 QDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQW 1426
            QDVDYSDPLRYLRGTT SSRLLTA+EE +LS GIQDLLKLERLQVELTERCG +PTF QW
Sbjct: 295  QDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQW 354

Query: 1427 AAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 1606
            AAAAGVDQ TLR+RLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVR
Sbjct: 355  AAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 414

Query: 1607 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTEN 1786
            GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL TEN
Sbjct: 415  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTEN 474

Query: 1787 GRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDL 1966
            GRHP+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N++LKPSEV+ADP+AET+E++
Sbjct: 475  GRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEI 534

Query: 1967 LIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 2146
            L KQFMRQDLEKVLD+LNPREKQV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 535  LTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 594

Query: 2147 FRKLKNKRRTKHLQQYLVA 2203
            FRKLKNK+RTK LQQY+ A
Sbjct: 595  FRKLKNKKRTKFLQQYINA 613


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  709 bits (1830), Expect = 0.0
 Identities = 389/617 (63%), Positives = 446/617 (72%), Gaps = 5/617 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKS---HHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX 535
            MSCLLPQFKC PDTF++ F++   H H ++  SK +EP   RT C+L             
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVL------------- 70

Query: 536  LEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTY 715
                            STT     P TST MT VLD+EKL+L S++A+S+ +AA+R WTY
Sbjct: 71   ----------------STTS----PSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTY 110

Query: 716  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 895
             GA G S E NLG + ATE L TS                           +M+++ N +
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 896  KSDSKET-DVPSDANTFMFESIMPYQLAERVSAIG-SKDDEIGPGKSQSSECPLTESHDV 1069
            K  SK    + +D +T M+  +      ER S IG S   E  P +  S + PL +S D+
Sbjct: 170  KPKSKPAISLSADTSTSMWAQLTE---RERASIIGDSVIVEAAPEEEYSEQQPLNKSADL 226

Query: 1070 EPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQ 1249
            EPT       + Q+S +I VRS                   NV+SVKSGST R++R S+Q
Sbjct: 227  EPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQ 286

Query: 1250 DVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWA 1429
            +VDYSDPLRYLR TTSSSRLLTA EE QLSAGIQDLLKLE L+  L+ERCG  PTFAQWA
Sbjct: 287  EVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWA 346

Query: 1430 AAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 1609
            AAAGVDQ+ LRRRLNYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 347  AAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 406

Query: 1610 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENG 1789
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENG
Sbjct: 407  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 466

Query: 1790 RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLL 1969
            RHP++EEVA+ATGLSMKRL AV+L PKAPRSLDQK GINQNLKPSEVIADPEAETAEDLL
Sbjct: 467  RHPNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLL 526

Query: 1970 IKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 2149
            IK+FM++DLEKVLD+LNPRE+QV+RWRFGLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 527  IKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 586

Query: 2150 RKLKNKRRTKHLQQYLV 2200
            RKLKNK+RTKHL QY +
Sbjct: 587  RKLKNKKRTKHLMQYAI 603


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  703 bits (1815), Expect = 0.0
 Identities = 388/614 (63%), Positives = 438/614 (71%), Gaps = 1/614 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEI 544
            MSCLLPQFKC PDTF+   K H      LSK RE  Y R QC L                
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHI-----LSKNREAIYFRVQCAL---------------- 39

Query: 545  EKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGA 724
                         STT     PP ST+ TAVLD+EKL+L S++++S+ +AA RPWTY G 
Sbjct: 40   -------------STTS----PPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGV 82

Query: 725  TGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSD 904
             G   E N  A  A E L+TS                            ++   N +KS+
Sbjct: 83   VGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSE 142

Query: 905  SKETDVPSDANTFMFESIMPYQLAERVSAIG-SKDDEIGPGKSQSSECPLTESHDVEPTT 1081
            +K     S  +T  F  I  +   ER+  +G S   E G     S +    +S D+EPT 
Sbjct: 143  TKPASFLSGDDTSQFRRIQ-FTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTL 201

Query: 1082 XXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDY 1261
                  +A+ S +I VRS                    VVSV+SGST R++R S+Q+VDY
Sbjct: 202  EELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDY 261

Query: 1262 SDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAG 1441
            SDPLRYLRGTTS+SRLLTATEE +LS GIQDLLKLE+LQ +L ER G +PTFAQWAAAAG
Sbjct: 262  SDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAG 321

Query: 1442 VDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 1621
            VDQKTLRRR NYGI CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRGAEKF
Sbjct: 322  VDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKF 381

Query: 1622 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPD 1801
            DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGRHP+
Sbjct: 382  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 441

Query: 1802 DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQF 1981
            +EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQNLKPSEVIADP+AETAE+LLIKQF
Sbjct: 442  NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQF 501

Query: 1982 MRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 2161
            MR+DLEKVL+SLNPREKQVIRWR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 502  MREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLK 561

Query: 2162 NKRRTKHLQQYLVA 2203
            NKRRTKHLQQYLV+
Sbjct: 562  NKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  700 bits (1807), Expect = 0.0
 Identities = 386/614 (62%), Positives = 437/614 (71%), Gaps = 1/614 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEI 544
            MSCLLPQFKC PDTF+   K H     +  K RE  Y R QC L                
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLH--ILCKSPKNREAIYFRVQCAL---------------- 42

Query: 545  EKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGA 724
                         STT     PP ST+ TAVLD+EKL+L S++++S+ +AA RPWTY G 
Sbjct: 43   -------------STTS----PPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGV 85

Query: 725  TGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSD 904
             G   E N  A  A E L+TS                            ++   N +KS+
Sbjct: 86   VGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSE 145

Query: 905  SKETDVPSDANTFMFESIMPYQLAERVSAIG-SKDDEIGPGKSQSSECPLTESHDVEPTT 1081
            +K     S  +T  F  I  +   ER+  +G S   E G     S +    +S D+EPT 
Sbjct: 146  TKPASFLSGDDTSQFRRIQ-FTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTL 204

Query: 1082 XXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDY 1261
                  +A+ S +I VRS                    VVSV+SGST R++R S+Q+VDY
Sbjct: 205  EELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDY 264

Query: 1262 SDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAG 1441
            SDPLRYLRGTTS+SRLLTATEE +LS GIQDLLKLE+LQ +L ER G +PTFAQWAAAAG
Sbjct: 265  SDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAG 324

Query: 1442 VDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 1621
            VDQKTLRRR NYGI CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRGAEKF
Sbjct: 325  VDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKF 384

Query: 1622 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPD 1801
            DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGRHP+
Sbjct: 385  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 444

Query: 1802 DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQF 1981
            +EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQNLKPSEVIADP+AETAE+LLIKQF
Sbjct: 445  NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQF 504

Query: 1982 MRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 2161
            MR+DLEKVL+SLNPREKQVIRWR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 505  MREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLK 564

Query: 2162 NKRRTKHLQQYLVA 2203
            NKRRTKHLQQYLV+
Sbjct: 565  NKRRTKHLQQYLVS 578


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  682 bits (1761), Expect = 0.0
 Identities = 379/617 (61%), Positives = 434/617 (70%), Gaps = 4/617 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSA----TQLSKGREPEYIRTQCILXXXXXXXXXXXX 532
            MSCLLPQF C PDTF+  F    HS     + L K R+   +  QC+L            
Sbjct: 1    MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARDINSL-AQCVL------------ 47

Query: 533  XLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWT 712
                             STT     P TS   T VL +EKL+  S+DANS  + ++RPWT
Sbjct: 48   -----------------STTS----PSTSVGATYVLSVEKLRFPSLDANSESVTSNRPWT 86

Query: 713  YTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNL 892
            YTGATG  +E N  A  ATE L+TS                           +++     
Sbjct: 87   YTGATGPPVEANFEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLVRPSTR 146

Query: 893  SKSDSKETDVPSDANTFMFESIMPYQLAERVSAIGSKDDEIGPGKSQSSECPLTESHDVE 1072
            ++S S    V S+A      +I   Q A RV    S   E+   +    +    ES+D++
Sbjct: 147  AESISL---VSSEA-----RNIKTAQAASRVR--DSLRAEMALIEDHPPKDAAKESNDLQ 196

Query: 1073 PTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQD 1252
            PT       Q QLS +I VRS                   NVV+VKSGS  RK+R+S+QD
Sbjct: 197  PTNEELRILQEQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQD 256

Query: 1253 VDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAA 1432
            VD+SDPLRYLR TTS+SRLLTATEE +LS GIQDLLKLE+LQ EL ERCG  PTFAQWAA
Sbjct: 257  VDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAA 316

Query: 1433 AAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 1612
            AAGVDQKTLRRR+NYGILCKDKMIKSN+RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA
Sbjct: 317  AAGVDQKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 376

Query: 1613 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGR 1792
            EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGR
Sbjct: 377  EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 436

Query: 1793 HPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLI 1972
             P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQNLKPSE+IADP+AET ED+L 
Sbjct: 437  QPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLEDVLT 496

Query: 1973 KQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 2152
            +QFM+QDL+KVLDSLN REKQVIRWRFG++DGRMKTLQEIGELMGVSRERIRQIESCAFR
Sbjct: 497  RQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQIESCAFR 556

Query: 2153 KLKNKRRTKHLQQYLVA 2203
            KLKNK+RTKHLQQYL++
Sbjct: 557  KLKNKKRTKHLQQYLIS 573


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  675 bits (1741), Expect = 0.0
 Identities = 378/617 (61%), Positives = 433/617 (70%), Gaps = 4/617 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKS---HHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXX 535
            MSCLLPQFKC PDTF++ F++   H  + TQ +K REP Y R QCIL             
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCIL------------- 48

Query: 536  LEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTY 715
                            STT  S       T TAVLD+EKL+L S +A S  IA + PWTY
Sbjct: 49   ----------------STTSPS-------TSTAVLDLEKLRLPSFEAPSDSIAPNSPWTY 85

Query: 716  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 895
                        G+  ATE LITS                           +++ N   +
Sbjct: 86   A---------TFGSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFPSA 136

Query: 896  KSDSKETDVPSDANTFMFESIMPYQLAERVSAIG-SKDDEIGPGKSQSSECPLTESHDVE 1072
            +++SK T  PS  +   +     +   ER   IG S   E GP +  S +  + ES  +E
Sbjct: 137  ETESKLTS-PSTIDASRWPQ---FTETERARIIGDSVATETGPREESSMQSSIKESDYLE 192

Query: 1073 PTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQD 1252
             T       Q QLS  I VRS                   +VVSVK GST +K+R S+Q+
Sbjct: 193  LTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQE 252

Query: 1253 VDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAA 1432
            VDYSDPLRYLRGTTS+SRLLTA+EE +LSA IQDLLKLERLQ EL ER G +PTFAQWAA
Sbjct: 253  VDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAA 312

Query: 1433 AAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 1612
            AAGVDQ+TLR+R+N+G +CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA
Sbjct: 313  AAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 372

Query: 1613 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGR 1792
            EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGR
Sbjct: 373  EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 432

Query: 1793 HPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLI 1972
            HPDDEEVAEA GLSMKRLSAV+LTPKAPRSLDQKIG+N +LKPSEVIADPEAETAE+LL+
Sbjct: 433  HPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEELLM 492

Query: 1973 KQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 2152
            KQFM+QDLEKVL++LNPRE QV+RWRFGLEDGRMKTLQEIGE+MGVSRERIRQIES AFR
Sbjct: 493  KQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFR 552

Query: 2153 KLKNKRRTKHLQQYLVA 2203
            KLKNK+RTK L+QYL+A
Sbjct: 553  KLKNKKRTKQLKQYLLA 569


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  670 bits (1729), Expect = 0.0
 Identities = 360/527 (68%), Positives = 407/527 (77%), Gaps = 2/527 (0%)
 Frame = +2

Query: 626  MTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAAFATENLITSXXXXXX 805
            MT VLD+EKL+L S++A+S+ +AA+R WTY GA G S E NLG + ATE L TS      
Sbjct: 1    MTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIA 59

Query: 806  XXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKET-DVPSDANTFMFESIMPYQLAER 982
                                 +M+++ N +K  SK    + +D NT M+  +      ER
Sbjct: 60   AASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTE---RER 116

Query: 983  VSAIG-SKDDEIGPGKSQSSECPLTESHDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXX 1159
             S IG S   E  P +  S + PL +S D+EPT       + Q+S +I VRS        
Sbjct: 117  ASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKA 176

Query: 1160 XXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLS 1339
                       NV+SVKSGST R++R S+Q+VDYSDPLRYLR TTSSSRLLTA EE QLS
Sbjct: 177  RRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLS 236

Query: 1340 AGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIR 1519
            AGIQDLLKLE L+  L+ERCG  PTFAQWAAAAGVDQ+ LRRRLNYGILCKDKMI SNIR
Sbjct: 237  AGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIR 296

Query: 1520 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 1699
            LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 297  LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 356

Query: 1700 QSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPR 1879
            QSRTIRLPFHMVEATYRVKEA+KQL++ENGRHP++EEVAEATGLSMKRL AV+LTPKAPR
Sbjct: 357  QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPR 416

Query: 1880 SLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGL 2059
            SLDQK GINQNLKPSEVIADPEAETAEDLLIK+FM++DLEKVLD+LNPRE+QV+RWRFGL
Sbjct: 417  SLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGL 476

Query: 2060 EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLV 2200
            EDGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHL QY +
Sbjct: 477  EDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  669 bits (1726), Expect = 0.0
 Identities = 372/628 (59%), Positives = 437/628 (69%), Gaps = 15/628 (2%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFK-----SHHHSA-----TQLSKGREPEYIRTQCILXXXXXX 514
            MSCLLPQFKC P+TF++ FK     SHHHS      +  +K R+P  +RTQCIL      
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCIL------ 54

Query: 515  XXXXXXXLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIA 694
                                        +  PPTST     LD+++LKL   D N+  ++
Sbjct: 55   ---------------------------SAASPPTSTGTATTLDVDRLKLPPFDTNTDSVS 87

Query: 695  ASRPWTYTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMM 874
              R  +Y GA  +S+ + L         +TS                           ++
Sbjct: 88   VERLRSYLGAVESSLASTL---------LTSEEASIAAAAAEAVTLAKAAVKVARDAALL 138

Query: 875  ISNGNLSKSDSKETDVPS-DANTFMFESIMPYQLAERVSAIGSKDDEIG----PGKSQSS 1039
             +N N S++ +K    P  DA  F +   M    +ER   IG   + +G    P +  + 
Sbjct: 139  ANNINSSRAGTKSQSSPKPDALHFKWAQFME---SERADIIG---EPVGVNKRPMEGDAL 192

Query: 1040 ECPLTESHDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGS 1219
            E   TES D+EPT+      Q +LS +ITV+S                   +V+S KSGS
Sbjct: 193  EPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGS 252

Query: 1220 TVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERC 1399
            + RK+R+S+Q+VDYSDPLRYLR TT++SRLLTATEE +LS GIQDLLKLERLQ EL ER 
Sbjct: 253  SSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERY 312

Query: 1400 GAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 1579
            G EPTFAQWAAAAGV+Q+TLR+RLNYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV
Sbjct: 313  GNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 372

Query: 1580 QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKE 1759
            QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKE
Sbjct: 373  QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKE 432

Query: 1760 AKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIAD 1939
            A+KQL  ENGRHPDD+E+AEA GLSMKRL+AV++TPKAPRSL+QKIGINQNLKPSEVI+D
Sbjct: 433  ARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD 492

Query: 1940 PEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRE 2119
            PEAET ED+LIKQFM+QDLEKVLDSLNPREKQVIRWRFG+EDGRMKTLQEIGE+MGVSRE
Sbjct: 493  PEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRE 552

Query: 2120 RIRQIESCAFRKLKNKRRTKHLQQYLVA 2203
            RIRQIESCAFRKLKNK+RTKHLQQY+++
Sbjct: 553  RIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  659 bits (1700), Expect = 0.0
 Identities = 352/543 (64%), Positives = 405/543 (74%), Gaps = 2/543 (0%)
 Frame = +2

Query: 581  NSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAA 760
            +S+T  S   PT+T    +LDME+  L S+  NS  +  +RPWTYTGA G   E N GAA
Sbjct: 81   SSSTSHSTSTPTAT----LLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAA 136

Query: 761  FATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKETDVPSDANT 940
             ATE L+TS                           +++SN + +K ++     P    T
Sbjct: 137  LATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSS---PVSCGT 193

Query: 941  FMFESIMPYQL-AERVSAIG-SKDDEIGPGKSQSSECPLTESHDVEPTTXXXXXXQAQLS 1114
              F       L  E    IG S   E    +    +  + ES +VEP        Q QLS
Sbjct: 194  SAFHINWAQHLETEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFELLQEQLS 253

Query: 1115 VNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTT 1294
              I  RS                   ++VSVKSGST RK+R+S+QDVD+SDPLRYLR TT
Sbjct: 254  NGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATT 313

Query: 1295 SSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLN 1474
             +SRLLTA EE +LS GIQ+LLKLE+LQ +L +RCG +PTFAQWAAAAGVDQKTLR+R+N
Sbjct: 314  HTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVN 373

Query: 1475 YGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 1654
            YGI+CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY
Sbjct: 374  YGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 433

Query: 1655 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLS 1834
            AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQL++ NGRHP+DEEVAEATGLS
Sbjct: 434  AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLS 493

Query: 1835 MKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDS 2014
            MKRL+AV+LTPKAPRSL+QKIGINQNLKPS+VIADP+AETAEDLL+K+FM+QDLEKVLDS
Sbjct: 494  MKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDS 553

Query: 2015 LNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQY 2194
            LNPREKQVIRWRFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY
Sbjct: 554  LNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 613

Query: 2195 LVA 2203
            +++
Sbjct: 614  VLS 616


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  633 bits (1633), Expect = e-178
 Identities = 354/615 (57%), Positives = 413/615 (67%), Gaps = 2/615 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEI 544
            MSCLLPQFKC PDTF++ F++  H  T  ++         QC+L                
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQ-------LPQCVLS--------------- 38

Query: 545  EKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGA 724
                                   +++  TAVLD+EKL+L S++ +S  I+A+RPWTY G 
Sbjct: 39   -----------------------SASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGG 75

Query: 725  TGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSD 904
             G   +   G + A E LI +                            M  N +  K  
Sbjct: 76   IGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMK-- 133

Query: 905  SKETDVPSDANTFMFESIMPYQLA-ERVSAIG-SKDDEIGPGKSQSSECPLTESHDVEPT 1078
             KET +P  + T  F S+       ER   IG S   E    +  S + P  E   +EPT
Sbjct: 134  -KETKIPIASTTDSFSSMWSLLTEKERADIIGDSVSAETRLREEYSVQYPTEEYDCLEPT 192

Query: 1079 TXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVD 1258
                   Q QLS  I VRS                   NVVSVKSGST +K+R  +Q+VD
Sbjct: 193  QEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVD 252

Query: 1259 YSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAA 1438
             SDPLR+ RG +SSSRLL+ATEE +LS GIQDLLKLER++ EL ER G EP+FAQWAAAA
Sbjct: 253  QSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAA 312

Query: 1439 GVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 1618
            GVDQ TLR+RLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEK
Sbjct: 313  GVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEK 372

Query: 1619 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHP 1798
            FDASKGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPFHMV+ATYRVKEA+KQL++ENGRHP
Sbjct: 373  FDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGRHP 432

Query: 1799 DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQ 1978
            DD+EVAEA GLSMKRLSAV+LTPKAPRSLDQK+G N +LK SEV ADPEAETAEDLL+K+
Sbjct: 433  DDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKE 492

Query: 1979 FMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 2158
            FM++DL KVL SL+PRE QV+RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE  AFRKL
Sbjct: 493  FMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKL 552

Query: 2159 KNKRRTKHLQQYLVA 2203
            KNK RTK L+QY+VA
Sbjct: 553  KNKNRTKQLRQYMVA 567


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  622 bits (1603), Expect = e-175
 Identities = 346/615 (56%), Positives = 415/615 (67%), Gaps = 3/615 (0%)
 Frame = +2

Query: 368  SCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEIE 547
            SCLLPQFKC PD+F++ F++   S ++ +KG  P + + QC +                 
Sbjct: 3    SCLLPQFKCQPDSFSIHFRTSF-SVSKQNKG--PVFFQPQCAVTTS-------------- 45

Query: 548  KLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGAT 727
                P+L                   +T+ LD+ KL+L S D +S    + R WTYTG  
Sbjct: 46   ----PAL-------------------LTSTLDVAKLRLPSFDTDSDSRISDRQWTYTGTV 82

Query: 728  GTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDS 907
            G S E     A A+E L+TS                           +  ++ N +   S
Sbjct: 83   GPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATLFKNSNNTNLLIS 142

Query: 908  KETDVPSDANTFMFES---IMPYQLAERVSAIGSKDDEIGPGKSQSSECPLTESHDVEPT 1078
               D  S  + F  +    I+ +        +  K       K  S++  ++E  +VE  
Sbjct: 143  STADKRSKWDQFTEKERAGILGHLAVSDTGIVSDKSTAPASNKESSADL-ISEIQEVE-- 199

Query: 1079 TXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVD 1258
                   + Q + ++ VRS                    + SVK+GS+ RK+R   Q+VD
Sbjct: 200  -----LVEEQPAASLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVD 254

Query: 1259 YSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAA 1438
            ++DPLRYLR TTSSS+LLT  EEH+LSAGIQDLLKLERLQ ELTERCG +PTF+QWA+AA
Sbjct: 255  HNDPLRYLRVTTSSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAA 314

Query: 1439 GVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 1618
            GVDQK+LR+R+NYG  CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK
Sbjct: 315  GVDQKSLRKRINYGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 374

Query: 1619 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHP 1798
            FDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+KQL+TE GRHP
Sbjct: 375  FDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHP 434

Query: 1799 DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQ 1978
            ++EEVAEATGLSMKRL AV+L+PK PRSLDQKIG+NQNLKPSEVIADPEAET+ED+LIKQ
Sbjct: 435  ENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAETSEDILIKQ 494

Query: 1979 FMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 2158
            FMR+DL+KVLDSL  REKQVIRWRFG+EDGRMKTLQEIGELMGVSRER+RQIES AFRKL
Sbjct: 495  FMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSAFRKL 554

Query: 2159 KNKRRTKHLQQYLVA 2203
            KNK+R+ HLQQYLVA
Sbjct: 555  KNKKRSNHLQQYLVA 569


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  619 bits (1597), Expect = e-174
 Identities = 349/615 (56%), Positives = 412/615 (66%), Gaps = 4/615 (0%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSH----HHSATQLSKGREPEYIRTQCILXXXXXXXXXXXX 532
            M+CLLPQFKC PDTF+++   H      SAT L + R+    R QC +            
Sbjct: 1    MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAV------------ 48

Query: 533  XLEIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWT 712
                      S  P           PPT+   T++ D+EKL+L  V++NS+ ++A    T
Sbjct: 49   ----------STPP-----------PPTAAAETSIFDVEKLRLPYVESNSNSLSAFAQST 87

Query: 713  YTGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNL 892
            +    G+  E     A   + LI +                           +M  N   
Sbjct: 88   FLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQP 147

Query: 893  SKSDSKETDVPSDANTFMFESIMPYQLAERVSAIGSKDDEIGPGKSQSSECPLTESHDVE 1072
            +K  SK      +  +  F      QL E    +GS  +  G   S      ++E  D+E
Sbjct: 148  TKPVSK-----LEGQSLHFSGA---QLLEN-EQVGSMRNFEGSENSLREGDTVSEPADME 198

Query: 1073 PTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQD 1252
            PT       + +L  +ITVRS                   NVVSVK GS  RK+R+S+Q+
Sbjct: 199  PTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQE 258

Query: 1253 VDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAA 1432
            VDYSDPLRYLRG T+SSRLLT++EE +LSAGIQDLLKLE+L  EL  R G  P+F QWAA
Sbjct: 259  VDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAA 318

Query: 1433 AAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 1612
            AAG+DQ+TLRRRLN+G  CKDKMIKSN+RLVISIAKNYQG+GMNLQDLVQEGCRGLVRGA
Sbjct: 319  AAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGA 378

Query: 1613 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGR 1792
            EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL +ENG+
Sbjct: 379  EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGK 438

Query: 1793 HPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLI 1972
             P++EEVAEATGLSMKRL+AV++TPKAPRSLDQKIG N NLKPSEVIADPEAETAEDLL 
Sbjct: 439  QPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLT 498

Query: 1973 KQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 2152
            KQFMRQDLEKVLD+L+ REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFR
Sbjct: 499  KQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFR 558

Query: 2153 KLKNKRRTKHLQQYL 2197
            KL+NK++T +LQQY+
Sbjct: 559  KLQNKKKTINLQQYM 573


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  619 bits (1595), Expect = e-174
 Identities = 349/617 (56%), Positives = 413/617 (66%), Gaps = 5/617 (0%)
 Frame = +2

Query: 368  SCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEIE 547
            SCLLPQFKC PD+F++ FK+ + S ++ +KG    + + QC +                 
Sbjct: 3    SCLLPQFKCQPDSFSIHFKTSY-SLSKHNKGSV--FFQPQCAV----------------- 42

Query: 548  KLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGAT 727
                             S  PP  T+M   LD+ KL+L S D +S    + R WTYTG  
Sbjct: 43   -----------------STSPPLLTSM---LDVAKLRLPSFDTDSDSRISDRQWTYTGTV 82

Query: 728  GTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDS 907
            G S E     A A+E L+TS                              ++ N     S
Sbjct: 83   GPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATSFRNSYNTKVVVS 142

Query: 908  KETDVPSDANTFMFESIMPYQLAERVSAIGSKDDEI-----GPGKSQSSECPLTESHDVE 1072
               D  S  + F  +          VS  G   D+       P  + + +C    S D++
Sbjct: 143  SAADKRSKWDQFTEKERAGILGHLAVSDTGVVSDKSTAPAPAPAPAPAPDCNNESSGDLK 202

Query: 1073 PTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQD 1252
                     + QLSV+  VRS                   ++ SVK+GS+ RK+R+  Q+
Sbjct: 203  SEKQEVELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSSSRKKRAPSQE 262

Query: 1253 VDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAA 1432
            VD++DPLRYLR TTSSS+LLTA EE +LS GIQDLLKLERLQ ELTERCG +PTFAQWA+
Sbjct: 263  VDHNDPLRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWAS 322

Query: 1433 AAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 1612
            AAGVDQK+LR+R+NYG  CKD+MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA
Sbjct: 323  AAGVDQKSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 382

Query: 1613 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGR 1792
            EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+KQL++E G+
Sbjct: 383  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGK 442

Query: 1793 HPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLI 1972
             P++EEVAEATGLSMKRL AV+L+PK PRSLDQKIGINQNLKPSEVIADPEAET+ED+LI
Sbjct: 443  QPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQNLKPSEVIADPEAETSEDILI 502

Query: 1973 KQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 2152
            KQFMRQDL+KVLDSL+ REKQVIRWRFG+EDGRMKTLQEIGE MGVSRER+RQIES AFR
Sbjct: 503  KQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFR 562

Query: 2153 KLKNKRRTKHLQQYLVA 2203
            KLKNK+R+ HLQQYLVA
Sbjct: 563  KLKNKKRSNHLQQYLVA 579


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  617 bits (1590), Expect = e-173
 Identities = 327/531 (61%), Positives = 393/531 (74%), Gaps = 2/531 (0%)
 Frame = +2

Query: 617  STTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGATGTSMETNLGAAFATENLITSXXX 796
            S+T T V+D++K+++ S+  +S+ ++   P TY G  G+  +T+  AA  TE+L+ S   
Sbjct: 40   SSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESLLKSEEA 99

Query: 797  XXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDSKETDVPSDANTFMFESIMPYQLA 976
                                    +M+ +   S+SD K  D PS+A+    +     ++ 
Sbjct: 100  IIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSD-KVDDFPSEADILRLQRARLTEME 158

Query: 977  ERVSAIGSKDDEIGPGKSQSSECPLT--ESHDVEPTTXXXXXXQAQLSVNITVRSXXXXX 1150
               S  GS    IGP     S   L+  E  D +         Q Q S  + VRS     
Sbjct: 159  RIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENILEALQLQHSQRVAVRSRRQTE 218

Query: 1151 XXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEH 1330
                          N ++VK G+T R++R+ +Q++DYSDPLRYLRGTT+S++LLTATEE 
Sbjct: 219  RRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEEL 278

Query: 1331 QLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKS 1510
            +LS GIQDLLKLE+L  ELTER G EPTF QWAAAAG+DQK LRRRL+YG  CKDKMIKS
Sbjct: 279  ELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKS 338

Query: 1511 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 1690
            NIRLVISIAKNYQG G+++QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS
Sbjct: 339  NIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 398

Query: 1691 LSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPK 1870
            LSDQSRTIRLPFHMV+ATYRV+EA KQL++ENGRHP+DEEVAEATGLSMKRL+ V+LTPK
Sbjct: 399  LSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPK 458

Query: 1871 APRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWR 2050
            APRSLDQKIGINQNLKPSEVI+DPEAETAEDLL+KQFM+QDLEKVL++LNPREKQV+RWR
Sbjct: 459  APRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWR 518

Query: 2051 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVA 2203
            FGLEDGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTK+L+QYL++
Sbjct: 519  FGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNLRQYLLS 569


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  610 bits (1572), Expect = e-171
 Identities = 309/385 (80%), Positives = 340/385 (88%)
 Frame = +2

Query: 1049 LTESHDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVR 1228
            + ES DVE T       + QLS  IT RS                   +VVSVKSGST R
Sbjct: 17   IKESEDVESTNQEFELLREQLSEGITARSSRQIERKARRAKAAEKAAASVVSVKSGSTSR 76

Query: 1229 KRRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAE 1408
            K+R+S+QDVD+SDPLRYLR TT +SRLLTA EE +LS GIQ+LLKLE+LQ EL +RCG +
Sbjct: 77   KKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQ 136

Query: 1409 PTFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 1588
            PT AQWAAAAGVDQKTLR+R+NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ+G
Sbjct: 137  PTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQG 196

Query: 1589 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKK 1768
            CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKK
Sbjct: 197  CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKK 256

Query: 1769 QLFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEA 1948
            QL++ NGRHP+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQNLKPSEVIADPEA
Sbjct: 257  QLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEA 316

Query: 1949 ETAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIR 2128
            ETAED+L+K+FM+QDLEKVLDSLN REKQV+RWRFGLEDGRMKTLQEIGELMGVSRERIR
Sbjct: 317  ETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 376

Query: 2129 QIESCAFRKLKNKRRTKHLQQYLVA 2203
            QIESCAFRKLKNK+RTKHLQQY+V+
Sbjct: 377  QIESCAFRKLKNKKRTKHLQQYVVS 401


>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
            lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
            ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  606 bits (1563), Expect = e-170
 Identities = 343/613 (55%), Positives = 409/613 (66%), Gaps = 1/613 (0%)
 Frame = +2

Query: 368  SCLLPQFKCLPDTFALTFKSHHHSATQLSKGREPEYIRTQCILXXXXXXXXXXXXXLEIE 547
            SCLLPQFKC PD+F++ F++    A + +KG    + + QC +                 
Sbjct: 3    SCLLPQFKCPPDSFSIHFRTSF-CARKHNKGSV--FFQPQCAVSTS-------------- 45

Query: 548  KLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRPWTYTGAT 727
                P+L                   +T++LD+ KL+L S D +S    + R WTYT   
Sbjct: 46   ----PAL-------------------LTSMLDVAKLRLPSFDTDSDSRISDRQWTYTRTD 82

Query: 728  GTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLSKSDS 907
            G S E     A A+E L+TS                           +  ++ N +   S
Sbjct: 83   GPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLLIS 142

Query: 908  KETDVPSDANTFMFESIMPYQLAERVSAIGSKDDEI-GPGKSQSSECPLTESHDVEPTTX 1084
               D  S  + F  +          VS  G   D+I  P  ++ S   L      E    
Sbjct: 143  STADKRSKWDQFTEKERAGILGHLAVSDNGIVSDKITAPASNKESPGDLESEKQEE---- 198

Query: 1085 XXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRKRRSSIQDVDYS 1264
                 + Q SV++ VRS                    + SVK+GS  RK+R   Q+VD++
Sbjct: 199  -VELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPSVKTGSNPRKKRLVAQEVDHN 257

Query: 1265 DPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEPTFAQWAAAAGV 1444
            DPLRYLR TTSSS+LLT  EEH+LSAGIQDLLKLERLQ ELTERCG +PTFAQWA+AAGV
Sbjct: 258  DPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQWASAAGV 317

Query: 1445 DQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 1624
            DQK+LR+R+++G LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 318  DQKSLRKRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 377

Query: 1625 ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLFTENGRHPDD 1804
            A+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEA+KQL++E G+HP +
Sbjct: 378  ATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKN 437

Query: 1805 EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKQFM 1984
            EE+AEATGLSMKRL AV+L+PK PRSLDQKIG+NQNLKPSEVIADPEA T+ED+LIK+FM
Sbjct: 438  EEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFM 497

Query: 1985 RQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 2164
            RQDL+KVLDSL  REKQVIRWRFG+EDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKN
Sbjct: 498  RQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKN 557

Query: 2165 KRRTKHLQQYLVA 2203
            K+R+ HLQQYLVA
Sbjct: 558  KKRSNHLQQYLVA 570


>ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cicer arietinum]
          Length = 564

 Score =  605 bits (1560), Expect = e-170
 Identities = 339/624 (54%), Positives = 407/624 (65%), Gaps = 11/624 (1%)
 Frame = +2

Query: 365  MSCLLPQFKCLPDTFALTFKSHHHSATQL--SKGREPEYIRTQCILXXXXXXXXXXXXXL 538
            MSCLLPQF C PDTF     +H H    L  +K R   Y R QCIL              
Sbjct: 1    MSCLLPQFNCHPDTFRTPLPTHRHHLILLLQTKTRHNLYFRPQCIL-------------- 46

Query: 539  EIEKLRLPSLEPNSNSTTDGSWKPPTSTTMTAVLDMEKLKLLSVDANSSLIAASRP-WTY 715
                                S  PP+++            L+  D  ++  AA+ P W Y
Sbjct: 47   --------------------SAAPPSTSA-----------LIDFDVAAAAAAANSPNWPY 75

Query: 716  TGATGTSMETNLGAAFATENLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXMMISNGNLS 895
                    + +  A  + E+L+T+                           +++    L 
Sbjct: 76   VA------QAHFKATSSAESLLTNEEAVIAAAASEALTLAKAAAKVAKDAALLVKKKPLQ 129

Query: 896  KSDSKETDVPSDANTFMFESIMPYQLAERVSAIGS--------KDDEIGPGKSQSSECPL 1051
            ++  K + +PS  + F+ + +   +  E V+  GS        +D +I P + +  E   
Sbjct: 130  EAGFK-SQLPSTPDNFLLKWVQHMEAQEAVAGGGSVSNGAEILEDVDISPNQEELDE--- 185

Query: 1052 TESHDVEPTTXXXXXXQAQLSVNITVRSXXXXXXXXXXXXXXXXXXXNVVSVKSGSTVRK 1231
                  EPT       + QLS +I  RS                   N+VS KSGST RK
Sbjct: 186  -----EEPTCEELENSEEQLSDSIDARSGRQTERKARRVRASGKAATNIVSFKSGSTSRK 240

Query: 1232 RRSSIQDVDYSDPLRYLRGTTSSSRLLTATEEHQLSAGIQDLLKLERLQVELTERCGAEP 1411
            RR   Q+VDYSDPLRYLR TT ++RLLT  EE + S GIQDL+KLE+LQ +L E+CG EP
Sbjct: 241  RRVRTQEVDYSDPLRYLRTTTRTTRLLTPAEEIKYSEGIQDLIKLEKLQDDLVEKCGGEP 300

Query: 1412 TFAQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 1591
            TF QWA  AGVDQKTLR+RLNYG+ CK+KMIKSNIRLVIS+AKNYQG+GM+LQDLVQEGC
Sbjct: 301  TFGQWATLAGVDQKTLRKRLNYGVFCKEKMIKSNIRLVISVAKNYQGSGMSLQDLVQEGC 360

Query: 1592 RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQ 1771
            RGLVRGAEK+DASKGFKFSTYAHWWIKQAVRK+LS QSRTIRLPFHMV ATY+VKEA+KQ
Sbjct: 361  RGLVRGAEKYDASKGFKFSTYAHWWIKQAVRKALSVQSRTIRLPFHMVGATYKVKEARKQ 420

Query: 1772 LFTENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQNLKPSEVIADPEAE 1951
            L++ENGR PDDEEVAEATGLSMKRLSAV+LTPKAPRSL+QKIGINQ+LKPSEV+ADPEAE
Sbjct: 421  LYSENGRQPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQSLKPSEVLADPEAE 480

Query: 1952 TAEDLLIKQFMRQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQ 2131
            TAE+ LIKQFM++DLEKVLDSLNPRE+QVIRWRFG++DGRMKTLQEIGE+MGVSRERIRQ
Sbjct: 481  TAEEQLIKQFMKKDLEKVLDSLNPRERQVIRWRFGMDDGRMKTLQEIGEMMGVSRERIRQ 540

Query: 2132 IESCAFRKLKNKRRTKHLQQYLVA 2203
            IESCAFRKLKNK+R KHLQQYLV+
Sbjct: 541  IESCAFRKLKNKKRAKHLQQYLVS 564