BLASTX nr result

ID: Catharanthus22_contig00008051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008051
         (223 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56833.1| MADS-box protein STMADS11 subfamily [Coffea arabica]    60   3e-07
gb|AAK27151.1| MADS box transcription factor [Ipomoea batatas] g...    58   1e-06
gb|AFA37969.1| SVP3 [Actinidia chinensis]                              58   1e-06
gb|AFA37965.1| SVP3 [Actinidia deliciosa]                              58   1e-06

>gb|ADU56833.1| MADS-box protein STMADS11 subfamily [Coffea arabica]
          Length = 227

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +3

Query: 45  VCSCNSGPPPEDDCSDTSLKLGLPF 119
           VCSCNSGPPPEDDCSDTSLKLGLPF
Sbjct: 202 VCSCNSGPPPEDDCSDTSLKLGLPF 226


>gb|AAK27151.1| MADS box transcription factor [Ipomoea batatas]
           gi|22779232|dbj|BAC15562.1| IbMADS4 [Ipomoea batatas]
          Length = 229

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 45  VCSCNSGPPPEDDCSDTSLKLGLP 116
           VCSCNSGPPPEDDCSDTSLKLGLP
Sbjct: 204 VCSCNSGPPPEDDCSDTSLKLGLP 227


>gb|AFA37969.1| SVP3 [Actinidia chinensis]
          Length = 232

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 45  VCSCNSGPPPEDDCSDTSLKLGLPF 119
           VCSCNS PPPEDDCSDTSLKLGLPF
Sbjct: 208 VCSCNSAPPPEDDCSDTSLKLGLPF 232


>gb|AFA37965.1| SVP3 [Actinidia deliciosa]
          Length = 230

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 45  VCSCNSGPPPEDDCSDTSLKLGLPF 119
           VCSCNS PPPEDDCSDTSLKLGLPF
Sbjct: 206 VCSCNSAPPPEDDCSDTSLKLGLPF 230


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