BLASTX nr result
ID: Catharanthus22_contig00007968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00007968
(1044 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004503998.1| PREDICTED: mediator of RNA polymerase II tra... 161 5e-37
gb|EXB33509.1| hypothetical protein L484_011099 [Morus notabilis] 160 6e-37
ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II tra... 158 3e-36
ref|XP_003525092.1| PREDICTED: mediator of RNA polymerase II tra... 158 3e-36
gb|EMJ02504.1| hypothetical protein PRUPE_ppa013061mg [Prunus pe... 158 4e-36
ref|XP_003531389.1| PREDICTED: mediator of RNA polymerase II tra... 156 1e-35
ref|XP_006365380.1| PREDICTED: mediator of RNA polymerase II tra... 153 1e-34
gb|ESW31776.1| hypothetical protein PHAVU_002G266700g [Phaseolus... 153 1e-34
ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246... 152 2e-34
ref|XP_002523099.1| conserved hypothetical protein [Ricinus comm... 152 2e-34
gb|EOX95112.1| Uncharacterized protein TCM_004672 [Theobroma cacao] 149 1e-33
ref|XP_002321001.2| hypothetical protein POPTR_0014s12270g [Popu... 148 3e-33
emb|CBI36875.3| unnamed protein product [Vitis vinifera] 144 7e-32
ref|XP_006444377.1| hypothetical protein CICLE_v10022754mg [Citr... 142 2e-31
ref|XP_006479986.1| PREDICTED: mediator of RNA polymerase II tra... 142 3e-31
ref|XP_004246053.1| PREDICTED: mediator of RNA polymerase II tra... 138 3e-30
ref|XP_003630135.1| hypothetical protein MTR_8g092180 [Medicago ... 137 5e-30
ref|XP_004296722.1| PREDICTED: mediator of RNA polymerase II tra... 135 3e-29
ref|XP_006367766.1| PREDICTED: mediator of RNA polymerase II tra... 134 8e-29
ref|XP_003568898.1| PREDICTED: uncharacterized protein LOC100840... 133 1e-28
>ref|XP_004503998.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like isoform X1 [Cicer arietinum]
gi|502139977|ref|XP_004503999.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 28-like isoform
X2 [Cicer arietinum]
Length = 143
Score = 161 bits (407), Expect = 5e-37
Identities = 86/143 (60%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
Frame = -3
Query: 766 MAERQSLDQQHAPDSQSPSA----LKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSH 599
M +RQ +DQQH + Q PS+ KDDM++CVM LQAIDRSPHPSH
Sbjct: 1 MGDRQVVDQQHTAEQQLPSSPPPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSH 60
Query: 598 QIDVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAK 419
QIDV+RHARDFMEAAKKLQL+FISLQRED+PTKAEML+KEI LI +Q
Sbjct: 61 QIDVDRHARDFMEAAKKLQLYFISLQREDRPTKAEMLRKEITMMEDELNEKNELIKKQEH 120
Query: 418 LIQGWREELKDQLDKHNAELERV 350
LIQ W++ELKDQL+KHN EL+RV
Sbjct: 121 LIQEWKKELKDQLNKHNIELDRV 143
>gb|EXB33509.1| hypothetical protein L484_011099 [Morus notabilis]
Length = 194
Score = 160 bits (406), Expect = 6e-37
Identities = 87/140 (62%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
Frame = -3
Query: 766 MAERQSLDQQHAPDS--QSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQI 593
MAERQ LDQQH D QS A K+DMI C+M LQAIDRSPHPSHQI
Sbjct: 1 MAERQGLDQQHQTDPPLQSAGAPKEDMIACLMALEASLLPCLPAKELQAIDRSPHPSHQI 60
Query: 592 DVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLI 413
DVERHARDFMEAAKKLQL+FI LQRE+QP KAE L+KEI +I++ KLI
Sbjct: 61 DVERHARDFMEAAKKLQLYFIGLQREEQPNKAETLRKEIAAMEEELKHKTEIINKHEKLI 120
Query: 412 QGWREELKDQLDKHNAELER 353
GWR+ELKDQLDKH ELER
Sbjct: 121 LGWRKELKDQLDKHQTELER 140
>ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Cucumis sativus]
gi|449484322|ref|XP_004156851.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 28-like [Cucumis
sativus]
Length = 141
Score = 158 bits (400), Expect = 3e-36
Identities = 84/141 (59%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Frame = -3
Query: 766 MAERQSLDQQHA--PDSQSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQI 593
MAERQ +DQQH+ P QS + ++DMI VM LQAIDRSPHPSHQ+
Sbjct: 1 MAERQPIDQQHSLDPQLQSSQSPREDMIAYVMALEAALLPCLPARELQAIDRSPHPSHQV 60
Query: 592 DVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLI 413
DVERHARDFMEAAKKLQL+FI LQREDQPTK E L+KEI +I +Q KLI
Sbjct: 61 DVERHARDFMEAAKKLQLYFIGLQREDQPTKVETLRKEISAIEEELKVKNEIIKKQEKLI 120
Query: 412 QGWREELKDQLDKHNAELERV 350
+GW+++LKDQLDKHN ELE+V
Sbjct: 121 EGWKKDLKDQLDKHNNELEKV 141
>ref|XP_003525092.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Glycine max]
Length = 141
Score = 158 bits (400), Expect = 3e-36
Identities = 85/141 (60%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Frame = -3
Query: 766 MAERQSLDQQHAPDSQSPSA--LKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQI 593
M +RQ +DQQH D Q PS+ KDDM++CVM LQAIDRSPHPSHQI
Sbjct: 1 MGDRQVVDQQHMGDPQLPSSPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSHQI 60
Query: 592 DVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLI 413
DV+R+ARDFMEAAKKLQL+FISLQRED+PTK EML+KEI LI +Q LI
Sbjct: 61 DVDRYARDFMEAAKKLQLYFISLQREDKPTKVEMLRKEIALMEEELNIKNELIKKQENLI 120
Query: 412 QGWREELKDQLDKHNAELERV 350
Q W++ELKDQLDKH EL+RV
Sbjct: 121 QEWKKELKDQLDKHKIELDRV 141
>gb|EMJ02504.1| hypothetical protein PRUPE_ppa013061mg [Prunus persica]
Length = 142
Score = 158 bits (399), Expect = 4e-36
Identities = 86/142 (60%), Positives = 100/142 (70%), Gaps = 3/142 (2%)
Frame = -3
Query: 766 MAERQSLDQQ-HAPDSQ--SPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQ 596
MAERQ+ DQQ H D+Q SP ++DM+ CV+ LQAIDRSPHPSHQ
Sbjct: 1 MAERQAADQQQHQIDAQMQSPQPQREDMVACVIALEAALLPCLPARELQAIDRSPHPSHQ 60
Query: 595 IDVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKL 416
IDVERHARDFMEAAKKLQL+FI LQREDQPTKA+ L+KEI LI + +L
Sbjct: 61 IDVERHARDFMEAAKKLQLYFIGLQREDQPTKAQQLRKEIDAMEEELRIKTELIKKHERL 120
Query: 415 IQGWREELKDQLDKHNAELERV 350
IQGW+++LKDQLDKHN ELERV
Sbjct: 121 IQGWKKDLKDQLDKHNTELERV 142
>ref|XP_003531389.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Glycine max]
Length = 141
Score = 156 bits (394), Expect = 1e-35
Identities = 83/141 (58%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Frame = -3
Query: 766 MAERQSLDQQHAPDSQSPSA--LKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQI 593
M +R +DQQH D+Q PS+ KDDM++CVM LQAIDRSPHPSHQI
Sbjct: 1 MGDRLVVDQQHTGDAQLPSSPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSHQI 60
Query: 592 DVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLI 413
DV+R+ARDFMEAAKKLQL+FISLQRED+PTK EML+KE+ LI +Q LI
Sbjct: 61 DVDRYARDFMEAAKKLQLYFISLQREDKPTKLEMLRKEVALMEEELNKKNELIKKQENLI 120
Query: 412 QGWREELKDQLDKHNAELERV 350
Q W++ELKDQLDKH EL+RV
Sbjct: 121 QEWKKELKDQLDKHKIELDRV 141
>ref|XP_006365380.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like isoform X1 [Solanum tuberosum]
gi|565399692|ref|XP_006365381.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 28-like isoform
X2 [Solanum tuberosum]
Length = 140
Score = 153 bits (386), Expect = 1e-34
Identities = 85/140 (60%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
Frame = -3
Query: 766 MAERQSLDQQHAPDSQSPS-ALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQID 590
MAER S+DQQ P+SQ S A +DDMI CVM LQAIDRS HP HQID
Sbjct: 1 MAERHSVDQQQTPESQMQSPASRDDMIACVMALEAALLPCLPARELQAIDRSAHPYHQID 60
Query: 589 VERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQ 410
VERHARDFMEAAKKLQL I LQRED P+K +ML+KEI LI +Q +LIQ
Sbjct: 61 VERHARDFMEAAKKLQLFLIGLQREDLPSKPDMLRKEIAKMEEELKTKTELISKQERLIQ 120
Query: 409 GWREELKDQLDKHNAELERV 350
WR+EL DQLDKHN ELERV
Sbjct: 121 EWRKELNDQLDKHNMELERV 140
>gb|ESW31776.1| hypothetical protein PHAVU_002G266700g [Phaseolus vulgaris]
Length = 141
Score = 153 bits (386), Expect = 1e-34
Identities = 82/141 (58%), Positives = 97/141 (68%), Gaps = 2/141 (1%)
Frame = -3
Query: 766 MAERQSLDQQHAPDSQSPSA--LKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQI 593
M +RQ ++QQH D Q PS+ KDDM++CVM LQAIDRSPHPSHQI
Sbjct: 1 MGDRQVIEQQHIGDPQLPSSPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSHQI 60
Query: 592 DVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLI 413
DV+R+ARDFMEAAKKLQL+FISLQRED+PTK EML+KEI LI +Q LI
Sbjct: 61 DVDRYARDFMEAAKKLQLYFISLQREDKPTKVEMLRKEIALMEEELNIKDELIKKQENLI 120
Query: 412 QGWREELKDQLDKHNAELERV 350
Q W++ LKDQLDKH EL +V
Sbjct: 121 QEWKKGLKDQLDKHKTELNKV 141
>ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246950 [Vitis vinifera]
Length = 139
Score = 152 bits (385), Expect = 2e-34
Identities = 86/140 (61%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = -3
Query: 766 MAERQ-SLDQQHAPDSQSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQID 590
MAE+ +D Q A P + DMI CVM LQAIDRSPHPSHQID
Sbjct: 1 MAEQSPQVDAQAAAGPPLPPP-RQDMIACVMALEAALLPCLPARELQAIDRSPHPSHQID 59
Query: 589 VERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQ 410
VERHARDFMEAAKKLQ++FISLQREDQPTKAE L+KEI LI++Q +LIQ
Sbjct: 60 VERHARDFMEAAKKLQVYFISLQREDQPTKAETLRKEIAVMEEELRLKTELINKQERLIQ 119
Query: 409 GWREELKDQLDKHNAELERV 350
GWR+ELKDQLDKHN ELERV
Sbjct: 120 GWRKELKDQLDKHNTELERV 139
>ref|XP_002523099.1| conserved hypothetical protein [Ricinus communis]
gi|223537661|gb|EEF39284.1| conserved hypothetical
protein [Ricinus communis]
Length = 140
Score = 152 bits (384), Expect = 2e-34
Identities = 84/140 (60%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
Frame = -3
Query: 766 MAERQSLDQQHAPD-SQSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQID 590
MAERQ++DQQ SQ A +DMI CVM LQAIDRSPHPSHQID
Sbjct: 1 MAERQAMDQQQLQSPSQQHQAATEDMIECVMALEAALLPCLPARELQAIDRSPHPSHQID 60
Query: 589 VERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQ 410
VERHARDFMEAAKKLQL+FI LQREDQPT AE L+KEI +I +Q +LIQ
Sbjct: 61 VERHARDFMEAAKKLQLYFIGLQREDQPTAAETLRKEIAVMEEELKIKDEIIKKQERLIQ 120
Query: 409 GWREELKDQLDKHNAELERV 350
WR+EL DQL KH ELERV
Sbjct: 121 EWRKELTDQLQKHKTELERV 140
>gb|EOX95112.1| Uncharacterized protein TCM_004672 [Theobroma cacao]
Length = 138
Score = 149 bits (377), Expect = 1e-33
Identities = 81/138 (58%), Positives = 96/138 (69%)
Frame = -3
Query: 763 AERQSLDQQHAPDSQSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVE 584
+ERQ L Q P QS + ++DMI+ V+ LQAIDRSPHPSHQIDVE
Sbjct: 3 SERQEL--QLDPQIQSAQSSREDMISWVVALETALLPCLPARELQAIDRSPHPSHQIDVE 60
Query: 583 RHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQGW 404
RHARDFMEAAKKLQL+FI LQRED+PT+AEML+KEI +I+ Q +LIQGW
Sbjct: 61 RHARDFMEAAKKLQLYFIGLQREDRPTRAEMLRKEIATMEEELKVKSEIINNQERLIQGW 120
Query: 403 REELKDQLDKHNAELERV 350
R++L DQLDKHN ELERV
Sbjct: 121 RKDLTDQLDKHNTELERV 138
>ref|XP_002321001.2| hypothetical protein POPTR_0014s12270g [Populus trichocarpa]
gi|550324047|gb|EEE99316.2| hypothetical protein
POPTR_0014s12270g [Populus trichocarpa]
Length = 146
Score = 148 bits (374), Expect = 3e-33
Identities = 82/146 (56%), Positives = 95/146 (65%), Gaps = 7/146 (4%)
Frame = -3
Query: 766 MAERQSLDQQHAPDS-------QSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPH 608
M +RQ++DQQ S Q A ++DMI CVM LQAIDRSPH
Sbjct: 1 MGDRQAVDQQQQLQSPSQLQQQQQQGAAREDMIGCVMALEAALLPCLPARELQAIDRSPH 60
Query: 607 PSHQIDVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQ 428
PSHQIDVERHARDFMEAAKKLQL+FI LQREDQPT +E L+K+I LI +
Sbjct: 61 PSHQIDVERHARDFMEAAKKLQLYFIGLQREDQPTMSETLRKDIAMMEEELKVKDELIKR 120
Query: 427 QAKLIQGWREELKDQLDKHNAELERV 350
Q +LIQGW +ELKDQ +KHN ELERV
Sbjct: 121 QERLIQGWWKELKDQAEKHNTELERV 146
>emb|CBI36875.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 144 bits (362), Expect = 7e-32
Identities = 72/94 (76%), Positives = 79/94 (84%)
Frame = -3
Query: 631 QAIDRSPHPSHQIDVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXX 452
QAIDRSPHPSHQIDVERHARDFMEAAKKLQ++FISLQREDQPTKAE L+KEI
Sbjct: 17 QAIDRSPHPSHQIDVERHARDFMEAAKKLQVYFISLQREDQPTKAETLRKEIAVMEEELR 76
Query: 451 XXXXLIDQQAKLIQGWREELKDQLDKHNAELERV 350
LI++Q +LIQGWR+ELKDQLDKHN ELERV
Sbjct: 77 LKTELINKQERLIQGWRKELKDQLDKHNTELERV 110
>ref|XP_006444377.1| hypothetical protein CICLE_v10022754mg [Citrus clementina]
gi|557546639|gb|ESR57617.1| hypothetical protein
CICLE_v10022754mg [Citrus clementina]
Length = 142
Score = 142 bits (358), Expect = 2e-31
Identities = 81/142 (57%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Frame = -3
Query: 766 MAERQSLDQQHAPDS-QSPSALKDDM--ITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQ 596
MA++ + D Q QSP +DDM I+CV LQAIDRSPHPSHQ
Sbjct: 1 MAQQAAADHQQLDSPLQSPQPSRDDMNMISCVTALEAALLPCLPARELQAIDRSPHPSHQ 60
Query: 595 IDVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKL 416
IDVERHARDFMEAAKKLQL+FISLQREDQPT+ EML+K+I LI +Q +L
Sbjct: 61 IDVERHARDFMEAAKKLQLYFISLQREDQPTEVEMLRKDIAIMEEELKAKKELIKKQERL 120
Query: 415 IQGWREELKDQLDKHNAELERV 350
IQ WR +LK QLDKH ELERV
Sbjct: 121 IQRWRNDLKGQLDKHITELERV 142
>ref|XP_006479986.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Citrus sinensis]
Length = 142
Score = 142 bits (357), Expect = 3e-31
Identities = 80/142 (56%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Frame = -3
Query: 766 MAERQSLDQQHAPDS-QSPSALKDDM--ITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQ 596
MA++ + D Q QSP +DDM I+CV LQAIDRSPHPSHQ
Sbjct: 1 MAQQAAADHQQLDSPLQSPQPSRDDMNMISCVTALEAALLPCLPARELQAIDRSPHPSHQ 60
Query: 595 IDVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKL 416
IDVERHARDFMEAAKKLQL+FISLQREDQPT+ EML+K+I LI +Q +L
Sbjct: 61 IDVERHARDFMEAAKKLQLYFISLQREDQPTEVEMLRKDIAIMEEELKAKKELIKKQERL 120
Query: 415 IQGWREELKDQLDKHNAELERV 350
+Q WR +LK QLDKH ELERV
Sbjct: 121 VQRWRNDLKGQLDKHITELERV 142
>ref|XP_004246053.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Solanum lycopersicum]
Length = 124
Score = 138 bits (348), Expect = 3e-30
Identities = 75/124 (60%), Positives = 86/124 (69%)
Frame = -3
Query: 721 QSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQ 542
QSP++ +DDMI CVM LQAIDRS HP HQIDVERHARDFMEAAKKLQ
Sbjct: 2 QSPAS-RDDMIACVMALEAALLPCLPARELQAIDRSAHPYHQIDVERHARDFMEAAKKLQ 60
Query: 541 LHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQGWREELKDQLDKHNAE 362
L+ I LQRED P+K +ML+KEI L+ +Q +LIQ WR+ELKDQLDKHN E
Sbjct: 61 LYLIGLQREDLPSKPDMLRKEIAKMEEELKTKTELLSKQERLIQEWRKELKDQLDKHNME 120
Query: 361 LERV 350
LERV
Sbjct: 121 LERV 124
>ref|XP_003630135.1| hypothetical protein MTR_8g092180 [Medicago truncatula]
gi|355524157|gb|AET04611.1| hypothetical protein
MTR_8g092180 [Medicago truncatula]
Length = 115
Score = 137 bits (346), Expect = 5e-30
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = -3
Query: 694 MITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQLHFISLQRE 515
MI+CVM LQAIDRSPHPSHQIDV+RHARDFMEAAKKLQL+FISLQRE
Sbjct: 1 MISCVMALEAALLPCLPARELQAIDRSPHPSHQIDVDRHARDFMEAAKKLQLYFISLQRE 60
Query: 514 DQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQGWREELKDQLDKHNAELERV 350
D+PTKAEML+KEI LI +Q LIQ W++EL DQL+KHN EL RV
Sbjct: 61 DKPTKAEMLRKEITLMEDELNEKNELIKKQEHLIQEWKKELSDQLEKHNIELNRV 115
>ref|XP_004296722.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Fragaria vesca subsp. vesca]
Length = 122
Score = 135 bits (340), Expect = 3e-29
Identities = 70/124 (56%), Positives = 85/124 (68%)
Frame = -3
Query: 721 QSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQ 542
QSP K+DM+ CV LQAIDRSPHPSH IDVERHARDFM+AAKKLQ
Sbjct: 2 QSP---KEDMVACVKALEDALLPCLPARELQAIDRSPHPSHHIDVERHARDFMDAAKKLQ 58
Query: 541 LHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQGWREELKDQLDKHNAE 362
L+F+ LQREDQPT AE +K+EI +I + +LIQGW++ELKDQL+KHN E
Sbjct: 59 LYFLGLQREDQPTSAEQIKQEIGVMEEELNIKTEIIKKHERLIQGWKKELKDQLNKHNTE 118
Query: 361 LERV 350
L++V
Sbjct: 119 LQKV 122
>ref|XP_006367766.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like isoform X1 [Solanum tuberosum]
gi|565404700|ref|XP_006367767.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 28-like isoform
X2 [Solanum tuberosum] gi|565404702|ref|XP_006367768.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 28-like isoform X3 [Solanum tuberosum]
Length = 140
Score = 134 bits (336), Expect = 8e-29
Identities = 77/141 (54%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Frame = -3
Query: 766 MAERQSLDQQH--APDSQSPSALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQI 593
MA+R S+DQ P SP++ +DDM V+ LQAIDRS HP HQI
Sbjct: 1 MADRHSVDQHQNIEPQINSPTS-RDDMTAFVVALEAALLPCLPARELQAIDRSAHPYHQI 59
Query: 592 DVERHARDFMEAAKKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLI 413
DVERHARDFMEAAKKLQL+ + LQRED PTK EML+KEI LI +Q +LI
Sbjct: 60 DVERHARDFMEAAKKLQLNLVGLQREDLPTKPEMLRKEIEKMEEELETKTDLIAKQERLI 119
Query: 412 QGWREELKDQLDKHNAELERV 350
QGWR++LKDQ DKH ELE+V
Sbjct: 120 QGWRKDLKDQQDKHIMELEKV 140
>ref|XP_003568898.1| PREDICTED: uncharacterized protein LOC100840919 [Brachypodium
distachyon]
Length = 146
Score = 133 bits (335), Expect = 1e-28
Identities = 73/128 (57%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = -3
Query: 730 PDSQSPS-ALKDDMITCVMXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAA 554
P Q+P+ +++DDM+ CV LQA+DRS SHQIDVERHARDFMEAA
Sbjct: 19 PQQQTPAVSVRDDMMACVAALEAALLPCLPARELQAVDRSLQSSHQIDVERHARDFMEAA 78
Query: 553 KKLQLHFISLQREDQPTKAEMLKKEIVXXXXXXXXXXXLIDQQAKLIQGWREELKDQLDK 374
KKLQ +FISLQREDQPT EML+KEI LI + KLI+GW++ELKDQL K
Sbjct: 79 KKLQSYFISLQREDQPTTEEMLQKEIATMEEELKTKSELIAKHKKLIEGWQKELKDQLGK 138
Query: 373 HNAELERV 350
HN ELERV
Sbjct: 139 HNTELERV 146