BLASTX nr result
ID: Catharanthus22_contig00007906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00007906
(289 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 127 1e-27
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 127 1e-27
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 127 2e-27
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 126 3e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 125 7e-27
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 125 7e-27
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 122 4e-26
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 122 5e-26
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera] 122 5e-26
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 122 5e-26
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 121 8e-26
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 121 8e-26
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 120 1e-25
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 120 2e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 120 2e-25
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 119 4e-25
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 119 4e-25
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 119 5e-25
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 119 5e-25
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 119 5e-25
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 127 bits (320), Expect = 1e-27
Identities = 55/95 (57%), Positives = 73/95 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAV+TA YL+NRSPST I+F+TP E+W GKP N S L++FGC A+AH +GKL+P
Sbjct: 717 KKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEP 776
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDV 285
R+ K +F+GY GVKGYR+W ++ + +ISRDV
Sbjct: 777 RAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDV 811
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 127 bits (320), Expect = 1e-27
Identities = 55/95 (57%), Positives = 73/95 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAV+TA YL+NRSPST I+F+TP E+W GKP N S L++FGC A+AH +GKL+P
Sbjct: 930 KKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEP 989
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDV 285
R+ K +F+GY GVKGYR+W ++ + +ISRDV
Sbjct: 990 RAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDV 1024
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 127 bits (319), Expect = 2e-27
Identities = 56/96 (58%), Positives = 74/96 (77%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
+ FW EAV+TA YL+NRSPS+ I F+TP ELW GKP N NLRVFGC A+ H +GKL+
Sbjct: 608 RSFWAEAVNTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEA 667
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ KGVF+GYP+GVKGY++W K + + ++SRDV+
Sbjct: 668 RALKGVFVGYPDGVKGYKIWCKDQG--KCIVSRDVV 701
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 126 bits (316), Expect = 3e-27
Identities = 56/96 (58%), Positives = 71/96 (73%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FWGE V+TA YL+NR P I+F+TP E+W P N NL+VFGCTA+AH KEGKLDP
Sbjct: 73 KRFWGEVVNTAAYLVNRCPLAAIDFKTPEEVWTDYPLNFENLKVFGCTAYAHQKEGKLDP 132
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R++K +F+GYP GVKGY++W K + ISRDV+
Sbjct: 133 RAKKCMFVGYPEGVKGYKLWCKYGNTSKSFISRDVV 168
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 125 bits (313), Expect = 7e-27
Identities = 59/96 (61%), Positives = 75/96 (78%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSPS I+ +TPIE+W G P N S+LRVFGCTA+AH GKL+P
Sbjct: 825 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 884
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 885 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 918
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 125 bits (313), Expect = 7e-27
Identities = 59/96 (61%), Positives = 75/96 (78%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSPS I+ +TPIE+W G P N S+LRVFGCTA+AH GKL+P
Sbjct: 618 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 677
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 678 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 711
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 122 bits (307), Expect = 4e-26
Identities = 58/96 (60%), Positives = 74/96 (77%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSPS I+ +TPIE+W G P N S+LRVFGC A+AH GKL+P
Sbjct: 653 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCIAYAHVDNGKLEP 712
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 713 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 746
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 122 bits (306), Expect = 5e-26
Identities = 55/94 (58%), Positives = 73/94 (77%)
Frame = +1
Query: 7 FWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDPRS 186
FW EAVSTA YLINR P T I +TP+E+W GK + SNL+ FGCTA+ H EGKL+PR+
Sbjct: 598 FWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRA 657
Query: 187 RKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
+KGVF+GY +GVKG+R+W E+ RV++SR+V+
Sbjct: 658 KKGVFVGYGDGVKGFRIWSPAEK--RVIMSRNVV 689
>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
Length = 540
Score = 122 bits (306), Expect = 5e-26
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FWGEAV T YL+NR+PS+ I+ +T ELW GKP N +LR+FGCT + H EGKL
Sbjct: 305 KHFWGEAVMTTCYLVNRTPSSAIDLKTLEELWSGKPSNYDHLRIFGCTTYVHQSEGKLVT 364
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
RS K +F+GYP GVKGY++W K V+++ISRDV+
Sbjct: 365 RSIKCIFLGYPEGVKGYKLWNKESSGVKIIISRDVV 400
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 122 bits (306), Expect = 5e-26
Identities = 59/96 (61%), Positives = 72/96 (75%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EA STAVYLINRSPST INF P E W G P+LS+LR FGC A+ H +GKL+P
Sbjct: 600 KKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALPDLSSLRKFGCLAYIHADQGKLNP 659
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
RS+KG+F YP GVKGY+VW+ ++ + VISR+VI
Sbjct: 660 RSKKGIFTSYPEGVKGYKVWVLEDK--KCVISRNVI 693
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 121 bits (304), Expect = 8e-26
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVST YLINRSPS + +TPIE+W G P N S+LRVFGCTA+AH GKL+P
Sbjct: 653 KQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 712
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 713 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 746
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 121 bits (304), Expect = 8e-26
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVST YLINRSPS + +TPIE+W G P N S+LRVFGCTA+AH GKL+P
Sbjct: 653 KQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 712
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 713 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 746
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 120 bits (302), Expect = 1e-25
Identities = 57/94 (60%), Positives = 72/94 (76%)
Frame = +1
Query: 7 FWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDPRS 186
FW EA STA YLINRSPS I+ +TPIE+W G P N S+L+VFGCTA+AH GKL+PR+
Sbjct: 559 FWAEAASTACYLINRSPSYAIDKKTPIEMWSGSPANYSDLKVFGCTAYAHVDNGKLEPRA 618
Query: 187 RKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
K +F+GYP+GVK Y++W Q +VVISR+VI
Sbjct: 619 IKCIFLGYPSGVKAYKLWCPETQ--KVVISRNVI 650
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 120 bits (301), Expect = 2e-25
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSP I+ +TPIE+W G P N S+LRVFGCTA+AH GKL+P
Sbjct: 590 KQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGCTAYAHVDNGKLEP 649
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GY +GVKGY++W + +VVISR+V+
Sbjct: 650 RAIKCIFLGYASGVKGYKLWC--PETKKVVISRNVV 683
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 120 bits (300), Expect = 2e-25
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSPS I+ +TPIE+W G P N S+LRVFGCTA+AH GKL+P
Sbjct: 527 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 586
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R K +F+GY +GVKGY++W + +VVISR+V+
Sbjct: 587 RVIKCIFLGYLSGVKGYKLWC--PETKKVVISRNVV 620
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 119 bits (298), Expect = 4e-25
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSP I+ +TPI++W G P N S+L+VFGCTA+AH GKL+P
Sbjct: 435 KQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEP 494
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR V+
Sbjct: 495 RTIKCIFLGYPSGVKGYKLWC--PETKKVVISRYVV 528
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 119 bits (298), Expect = 4e-25
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSP I+ +TPI++W G P N S+L+VFGCTA+AH GKL+P
Sbjct: 603 KQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEP 662
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR V+
Sbjct: 663 RTIKCIFLGYPSGVKGYKLWC--PETKKVVISRYVV 696
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 119 bits (297), Expect = 5e-25
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSPS I+ +TPI++W G P N S+LRVFGC A+AH KL+P
Sbjct: 579 KQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEP 638
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 639 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 672
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 119 bits (297), Expect = 5e-25
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW EAVSTA YLINRSPS I+ +TPI++W G P N S+LRVFGC A+AH KL+P
Sbjct: 616 KQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEP 675
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R+ K +F+GYP+GVKGY++W + +VVISR+V+
Sbjct: 676 RAIKCIFLGYPSGVKGYKLWC--PETKKVVISRNVV 709
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 119 bits (297), Expect = 5e-25
Identities = 56/96 (58%), Positives = 71/96 (73%)
Frame = +1
Query: 1 KPFWGEAVSTAVYLINRSPSTVINFRTPIELWCGKPPNLSNLRVFGCTAFAH*KEGKLDP 180
K FW +A STAVYLINRSPS+ I + P ELW PN S L+ FGC + + +EGKLDP
Sbjct: 418 KKFWAKAASTAVYLINRSPSSSIENKIPEELWTSAVPNFSGLKRFGCVVYVYSQEGKLDP 477
Query: 181 RSRKGVFIGYPNGVKGYRVWLKGEQWVRVVISRDVI 288
R++KGVF+GYPNGVKG+RVW+ E+ R ISR+V+
Sbjct: 478 RAKKGVFVGYPNGVKGFRVWMIEEE--RCSISRNVV 511