BLASTX nr result

ID: Catharanthus22_contig00007888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00007888
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339699.1| PREDICTED: protein SDE2 homolog [Solanum tub...    69   5e-10
ref|XP_004231217.1| PREDICTED: uncharacterized protein LOC101247...    62   1e-07

>ref|XP_006339699.1| PREDICTED: protein SDE2 homolog [Solanum tuberosum]
          Length = 483

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
 Frame = -2

Query: 272 EHEKIHQILVKFLNGKHRAVNFTTPTINVATLKQKIQTXXXXXXXXXXXXXXXXXXTVLS 93
           E   IHQ+LVKFL+GKH+A+NFTTP+I+  TLK KIQ+                   +  
Sbjct: 5   EGSVIHQVLVKFLDGKHKALNFTTPSISTLTLKHKIQSLTSIPSHLQLLLPSNSFYPL-- 62

Query: 92  CDHKILNIGNDEPR-------------SAGDGNFPMVVHLLLR 3
            DH+ LN+ N  P              SA  GNFP+VV+LLLR
Sbjct: 63  HDHQTLNLANGLPETRNIGSPENLTNLSAEKGNFPVVVNLLLR 105


>ref|XP_004231217.1| PREDICTED: uncharacterized protein LOC101247169 [Solanum
           lycopersicum]
          Length = 482

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
 Frame = -2

Query: 260 IHQILVKFLNGKHRAVNFTTPTINVATLKQKIQTXXXXXXXXXXXXXXXXXXTVLSCDHK 81
           IHQ+LVKFL+GKH+A+NFTTP+I+  TLK KIQ+                   +   DH+
Sbjct: 9   IHQVLVKFLDGKHKALNFTTPSISTLTLKHKIQSLTSIPSHLQLLLPFNSFYPLQ--DHQ 66

Query: 80  ILNIGNDEPRSAGDG-------------NFPMVVHLLLR 3
            L + N  P +   G             NFP+VV+LLLR
Sbjct: 67  ALYLTNGLPDNRNIGSPENLTNLSPEKRNFPVVVNLLLR 105


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