BLASTX nr result

ID: Catharanthus22_contig00007858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00007858
         (562 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361489.1| PREDICTED: rho GTPase-activating protein gac...    67   2e-09
ref|XP_002269381.1| PREDICTED: uncharacterized protein At2g27730...    58   2e-06
ref|XP_006345870.1| PREDICTED: uncharacterized protein At2g27730...    56   7e-06

>ref|XP_006361489.1| PREDICTED: rho GTPase-activating protein gacHH-like [Solanum
           tuberosum]
          Length = 86

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/51 (74%), Positives = 40/51 (78%)
 Frame = -3

Query: 500 MSMRSVVSGSALGRLMETNRRLSSTSGLRYFSDDKGRILSEEERAKENVYI 348
           M+MRSVVS S + RLME   R SS SGLRYFSD KGRI SEEERAKE VYI
Sbjct: 1   MAMRSVVSSSGVRRLMEGGGR-SSISGLRYFSDSKGRIFSEEERAKEAVYI 50


>ref|XP_002269381.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial [Vitis
           vinifera] gi|147838584|emb|CAN74313.1| hypothetical
           protein VITISV_013806 [Vitis vinifera]
          Length = 85

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/51 (64%), Positives = 35/51 (68%)
 Frame = -3

Query: 500 MSMRSVVSGSALGRLMETNRRLSSTSGLRYFSDDKGRILSEEERAKENVYI 348
           M+MR  VS   L R ME  RR    S  RYFSDDKGR+LSEEERA ENVYI
Sbjct: 1   MAMRYTVSQIRLNRFMEGYRR----SAPRYFSDDKGRVLSEEERAAENVYI 47


>ref|XP_006345870.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial-like
           [Solanum tuberosum]
          Length = 87

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
 Frame = -3

Query: 500 MSMRSVVSGSALGRLME-TNRRL-SSTSGLRYFSDDKGRILSEEERAKENVYI 348
           M+MRSVVS S L RL E  N  L SS SGLRYFSD  G+IL EEERA+EN+YI
Sbjct: 1   MAMRSVVSFSGLRRLTEGANVALRSSVSGLRYFSD--GKILGEEERAQENIYI 51


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