BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00007819
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY29035.1| DNA-directed RNA polymerase II subunit rpb4, puta...    59   9e-07

>gb|EOY29035.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 1
           [Theobroma cacao] gi|508781780|gb|EOY29036.1|
           DNA-directed RNA polymerase II subunit rpb4, putative
           isoform 1 [Theobroma cacao]
          Length = 231

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -3

Query: 418 MISNIQVESVDEVFALVPSLEGKKLRLTEPLKDMLDELAKVKSS 287
           +I+N   E+VDEVFALV SLE KK RL+EPLKD+LDEL K+K S
Sbjct: 187 VIANTCPETVDEVFALVRSLEAKKSRLSEPLKDVLDELGKLKKS 230