BLASTX nr result
ID: Catharanthus22_contig00007777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00007777
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus... 87 2e-15
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 87 3e-15
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 87 3e-15
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 84 1e-14
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 84 1e-14
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 84 2e-14
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 84 2e-14
ref|XP_002331405.1| predicted protein [Populus trichocarpa] 84 2e-14
gb|EOY32188.1| Pseudouridine synthase isoform 3 [Theobroma cacao] 82 1e-13
gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao] 82 1e-13
gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao] 82 1e-13
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun... 81 1e-13
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik... 79 5e-13
gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus pe... 79 6e-13
ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-lik... 78 1e-12
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622... 78 1e-12
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr... 78 1e-12
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592... 77 3e-12
ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [A... 77 3e-12
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik... 77 3e-12
>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
Length = 440
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/76 (59%), Positives = 48/76 (63%)
Frame = +3
Query: 15 TKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLC 194
TKVMC+ELVANRFLRKMVRVLVAT +R KLMD DGLC
Sbjct: 362 TKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLC 421
Query: 195 LVDVGYTEFNPNNCFI 242
LVDVGYTEF+P CFI
Sbjct: 422 LVDVGYTEFDPQKCFI 437
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
K+MC+ELVANRFLRKMVRVLVAT +R KLMD DGLCL
Sbjct: 369 KIMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCL 428
Query: 198 VDVGYTEFNPNNCFIS 245
VDVGY+EF PNNC IS
Sbjct: 429 VDVGYSEFKPNNCLIS 444
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 444
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/76 (59%), Positives = 47/76 (61%)
Frame = +3
Query: 15 TKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLC 194
TKVMC+ELVANRFLRKMVRVLVAT +R KLMD DGLC
Sbjct: 366 TKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLC 425
Query: 195 LVDVGYTEFNPNNCFI 242
LVDVGYTEF P CFI
Sbjct: 426 LVDVGYTEFEPQKCFI 441
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = +3
Query: 15 TKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLC 194
TKVMCIELVANRFLRKMVRVLVAT +R KLMD DGLC
Sbjct: 357 TKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLC 416
Query: 195 LVDVGYTEFNPNNCFI 242
L+DVG+TEF+P CFI
Sbjct: 417 LIDVGFTEFDPQICFI 432
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = +3
Query: 15 TKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLC 194
TKVMCIELVANRFLRKMVRVLVAT +R KLMD DGLC
Sbjct: 326 TKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLC 385
Query: 195 LVDVGYTEFNPNNCFI 242
L+DVG+TEF+P CFI
Sbjct: 386 LIDVGFTEFDPQICFI 401
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/75 (57%), Positives = 47/75 (62%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMC+EL+ANRFLRKMVRVLVAT VR KLMD DGLCL
Sbjct: 382 RVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCL 441
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYTEF+P NC I
Sbjct: 442 VDVGYTEFDPRNCLI 456
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/75 (57%), Positives = 47/75 (62%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMC+EL+ANRFLRKMVRVLVAT VR KLMD DGLCL
Sbjct: 373 RVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCL 432
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYTEF+P NC I
Sbjct: 433 VDVGYTEFDPRNCLI 447
>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/75 (57%), Positives = 47/75 (62%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMC+EL+ANRFLRKMVRVLVAT VR KLMD DGLCL
Sbjct: 353 RVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCL 412
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYTEF+P NC I
Sbjct: 413 VDVGYTEFDPRNCLI 427
>gb|EOY32188.1| Pseudouridine synthase isoform 3 [Theobroma cacao]
Length = 303
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/76 (55%), Positives = 47/76 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMC+ELVANRFLRKMVRVLVAT +R KLM DGLCL
Sbjct: 228 EVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCL 287
Query: 198 VDVGYTEFNPNNCFIS 245
VDVGYTEF+P NC +S
Sbjct: 288 VDVGYTEFDPQNCLLS 303
>gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
Length = 446
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/76 (55%), Positives = 47/76 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMC+ELVANRFLRKMVRVLVAT +R KLM DGLCL
Sbjct: 371 EVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCL 430
Query: 198 VDVGYTEFNPNNCFIS 245
VDVGYTEF+P NC +S
Sbjct: 431 VDVGYTEFDPQNCLLS 446
>gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
Length = 444
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/76 (55%), Positives = 47/76 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMC+ELVANRFLRKMVRVLVAT +R KLM DGLCL
Sbjct: 369 EVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCL 428
Query: 198 VDVGYTEFNPNNCFIS 245
VDVGYTEF+P NC +S
Sbjct: 429 VDVGYTEFDPQNCLLS 444
>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase
A [Medicago truncatula]
Length = 400
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/76 (56%), Positives = 45/76 (59%)
Frame = +3
Query: 15 TKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLC 194
T+VMCIELVANRFLRKMVRVLVAT +R KLMD DGLC
Sbjct: 322 TRVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALLKLMDATCRRATAPPAPPDGLC 381
Query: 195 LVDVGYTEFNPNNCFI 242
LVDVGY EF CFI
Sbjct: 382 LVDVGYAEFEREKCFI 397
>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
Length = 422
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/80 (52%), Positives = 46/80 (57%)
Frame = +3
Query: 3 DKIPTKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXX 182
D +VMCIELVANRFLRKMVRVLVAT +R +LMD
Sbjct: 340 DNGEARVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALLRLMDATCRRATAPPAPP 399
Query: 183 DGLCLVDVGYTEFNPNNCFI 242
DGLCLVDVGY EF+ CFI
Sbjct: 400 DGLCLVDVGYAEFDQKKCFI 419
>gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
Length = 409
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
+VMCIELVANRFLR+MVRVLVAT +R KLMD DGLCL
Sbjct: 332 RVMCIELVANRFLRRMVRVLVATSIREAAAGADEDALLKLMDATCRRATAPPAPPDGLCL 391
Query: 198 VDVGYTEFNPNNCFI 242
VDVGY EF+P +C I
Sbjct: 392 VDVGYEEFDPQDCLI 406
>ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
subsp. vesca]
Length = 410
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
++MCIEL+ANRFLR+M+RVLVAT +R KLMD DGLCL
Sbjct: 333 RIMCIELIANRFLRRMIRVLVATSIREAAAGADEDALIKLMDATCRRATAPPAPPDGLCL 392
Query: 198 VDVGYTEFNPNNCFIS 245
VDVGY EF+P +C IS
Sbjct: 393 VDVGYEEFDPLDCLIS 408
>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
Length = 454
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
KVMC+ELVANRFLRKMVRVLVAT+VR KL+D +GLCL
Sbjct: 379 KVMCVELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCL 438
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYT F+P N I
Sbjct: 439 VDVGYTNFDPQNSLI 453
>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
gi|557556408|gb|ESR66422.1| hypothetical protein
CICLE_v10008288mg [Citrus clementina]
Length = 447
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
KVMC+ELVANRFLRKMVRVLVAT+VR KL+D +GLCL
Sbjct: 372 KVMCVELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCL 431
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYT F+P N I
Sbjct: 432 VDVGYTNFDPQNSLI 446
>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
Length = 436
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/75 (53%), Positives = 45/75 (60%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
K MCIELVANRFLRKMVRVLVAT +R KLMD DGLCL
Sbjct: 361 KTMCIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCL 420
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYT+++ +C I
Sbjct: 421 VDVGYTDYDIRHCLI 435
>ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [Amborella trichopoda]
gi|548854646|gb|ERN12556.1| hypothetical protein
AMTR_s00025p00208060 [Amborella trichopoda]
Length = 371
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/74 (54%), Positives = 44/74 (59%)
Frame = +3
Query: 21 VMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCLV 200
VMC+ELVANRFLRKMVRVLVAT +R +LMD DGLCLV
Sbjct: 297 VMCVELVANRFLRKMVRVLVATSIREAAAGAGDDVLLRLMDATCRRATAPPAPPDGLCLV 356
Query: 201 DVGYTEFNPNNCFI 242
DVGY +F P N FI
Sbjct: 357 DVGYEDFKPGNTFI 370
>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
lycopersicum]
Length = 436
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/75 (53%), Positives = 45/75 (60%)
Frame = +3
Query: 18 KVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXXKLMDXXXXXXXXXXXXXDGLCL 197
K MCIELVANRFLRKMVRVLVAT +R KLMD DGLCL
Sbjct: 361 KTMCIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCL 420
Query: 198 VDVGYTEFNPNNCFI 242
VDVGYT+++ +C I
Sbjct: 421 VDVGYTDYDIRHCLI 435