BLASTX nr result
ID: Catharanthus22_contig00007684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00007684
(764 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACV71020.1| UPA21 [Capsicum annuum] 159 8e-37
emb|CBI17917.3| unnamed protein product [Vitis vinifera] 158 2e-36
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g... 158 2e-36
ref|XP_006382190.1| hypothetical protein POPTR_0006s29200g [Popu... 155 1e-35
ref|XP_002330818.1| predicted protein [Populus trichocarpa] 153 5e-35
ref|XP_002332094.1| predicted protein [Populus trichocarpa] 145 1e-32
ref|XP_006453243.1| hypothetical protein CICLE_v10008200mg [Citr... 145 2e-32
gb|EOY29158.1| RNA-binding KH domain-containing protein [Theobro... 144 3e-32
gb|EXC31211.1| Poly(rC)-binding protein 3 [Morus notabilis] 140 4e-31
ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus ... 140 6e-31
gb|EMJ24435.1| hypothetical protein PRUPE_ppa004405mg [Prunus pe... 139 1e-30
ref|XP_006355217.1| PREDICTED: KH domain-containing protein At4g... 139 1e-30
ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus ... 138 2e-30
emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera] 138 2e-30
ref|XP_004168950.1| PREDICTED: uncharacterized protein LOC101231... 137 5e-30
ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-bin... 137 5e-30
ref|XP_004507898.1| PREDICTED: KH domain-containing protein At4g... 135 2e-29
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g... 135 2e-29
ref|XP_003533739.1| PREDICTED: poly(rC)-binding protein 3-like [... 131 3e-28
ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatul... 130 6e-28
>gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 159 bits (403), Expect = 8e-37
Identities = 106/225 (47%), Positives = 136/225 (60%), Gaps = 8/225 (3%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESY--NSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPE 176
+P+FEKTC+ D ES+ SQSLN + G SD+S RD L + E
Sbjct: 227 IPIFEKTCSQ----DRPLESWAEKSQSLNS--------EAGAVSDYSFSMNRDTYLLDCE 274
Query: 177 IPVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXX 356
+DSKL S +S YGQDPG + + A GR+ P+VTQ+TKV+QV L +AED
Sbjct: 275 AAMDSKLPRSTLSLYGQDPGHGGIRTSA-GRIG-PVVTQMTKVMQVPLLYAEDIIGIGGT 332
Query: 357 XXXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSI 536
RRTS AVL+VQES+ LP+EITIEIKG+SS+VQ AEQLIQE I+N+ KE A S+
Sbjct: 333 NIAYIRRTSKAVLTVQESRGLPEEITIEIKGSSSEVQTAEQLIQEFISNH---KEPAPSM 389
Query: 537 YRNADPGLSSYSHPTHHLYSTTSYQSQSLGG------RGYRNFRY 653
Y +PG S+S YS++S+QS+ GG GY NFRY
Sbjct: 390 YGMREPGFGSFSRYADS-YSSSSFQSERFGGYGSSSFGGYNNFRY 433
>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 158 bits (399), Expect = 2e-36
Identities = 100/214 (46%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGP-QLGFHSDFSHPAKRDNLLFNPEI 179
LP+FE+T N T D ++++ +SL HG Q G SD+S PAKR++L + E
Sbjct: 152 LPLFERTYNATISQDRQSDTWADKSL------LHGTSQTGMGSDYSLPAKRESLYLDRE- 204
Query: 180 PVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXX 359
+++ HS + YGQ+ G + + S LGR PIVTQI + +Q+ LS+AED
Sbjct: 205 ---TQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGAN 261
Query: 360 XXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIY 539
RRTSGA+L+VQES+ LPDEIT+EIKGTSSQVQ A+QLIQE I+N+ KE S Y
Sbjct: 262 IAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNH---KEPVPSSY 318
Query: 540 RNADPGL-SSYSHPTHHLYSTTSYQSQSLGGRGY 638
D GL SSYS + YS++S SQ GG GY
Sbjct: 319 GKMDSGLRSSYSQLGNTSYSSSSLSSQPYGG-GY 351
>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 158 bits (399), Expect = 2e-36
Identities = 100/214 (46%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGP-QLGFHSDFSHPAKRDNLLFNPEI 179
LP+FE+T N T D ++++ +SL HG Q G SD+S PAKR++L + E
Sbjct: 254 LPLFERTYNATISQDRQSDTWADKSL------LHGTSQTGMGSDYSLPAKRESLYLDRE- 306
Query: 180 PVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXX 359
+++ HS + YGQ+ G + + S LGR PIVTQI + +Q+ LS+AED
Sbjct: 307 ---TQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGAN 363
Query: 360 XXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIY 539
RRTSGA+L+VQES+ LPDEIT+EIKGTSSQVQ A+QLIQE I+N+ KE S Y
Sbjct: 364 IAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNH---KEPVPSSY 420
Query: 540 RNADPGL-SSYSHPTHHLYSTTSYQSQSLGGRGY 638
D GL SSYS + YS++S SQ GG GY
Sbjct: 421 GKMDSGLRSSYSQLGNTSYSSSSLSSQPYGG-GY 453
>ref|XP_006382190.1| hypothetical protein POPTR_0006s29200g [Populus trichocarpa]
gi|550337345|gb|ERP59987.1| hypothetical protein
POPTR_0006s29200g [Populus trichocarpa]
Length = 458
Score = 155 bits (393), Expect = 1e-35
Identities = 98/232 (42%), Positives = 130/232 (56%), Gaps = 15/232 (6%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQL--GFHSDFSHPAKRDNLLFNPE 176
+P+FEKT N T + ++ + A+ P + G SD+S KRD ++ E
Sbjct: 231 IPIFEKTYNATISQECPADA-RPDIAQPSLHSAYVPTIPSGIASDYSLSFKRDPSIYEHE 289
Query: 177 IPVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXX 356
+ K+S +S YGQDPG S LGR PIVTQ+T+ +QV LS+AED
Sbjct: 290 TQFEHKISQPGLSIYGQDPGIVGFRSTGLGRAAAPIVTQVTQTMQVPLSYAEDIIGVAGS 349
Query: 357 XXXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSI 536
RRTS A+LS+QES+ LPDEIT+EIKGT +QVQ A+QLIQE I N+ KE A S+
Sbjct: 350 NIAYIRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQLIQEFITNH---KEPASSM 406
Query: 537 YRNADPGLSSYSHPTHHLYSTTS-------YQSQSLGG------RGYRNFRY 653
Y D GLS+YSH Y ++S Y S S+GG GY N+R+
Sbjct: 407 YGKIDAGLSAYSHMAETGYPSSSFTSHLGGYGSSSMGGYGSPGAGGYNNYRF 458
>ref|XP_002330818.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 153 bits (387), Expect = 5e-35
Identities = 94/213 (44%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQL--GFHSDFSHPAKRDNLLFNPE 176
+P+FEKT N T + ++ + A+ P + G SD+S KRD ++ E
Sbjct: 189 IPIFEKTYNATISQECPADA-RPDIAQPSLHSAYVPTIPSGIASDYSLSFKRDPSIYEHE 247
Query: 177 IPVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXX 356
+ K+S +S YGQDPG S LGR PIVTQ+T+ +QV LS+AED
Sbjct: 248 TQFEHKISQPGLSIYGQDPGIVGFRSTGLGRAAAPIVTQVTQTMQVPLSYAEDIIGVAGS 307
Query: 357 XXXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSI 536
RRTS A+LS+QES+ LPDEIT+EIKGT +QVQ A+QLIQE I N+ KE A S+
Sbjct: 308 NIAYIRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQLIQEFITNH---KEPASSM 364
Query: 537 YRNADPGLSSYSHPTHHLYSTTSYQSQSLGGRG 635
Y D GLS+YSH Y ++S+ S LGG G
Sbjct: 365 YGKIDAGLSAYSHMAETGYPSSSFTSH-LGGYG 396
>ref|XP_002332094.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 145 bits (367), Expect = 1e-32
Identities = 95/233 (40%), Positives = 129/233 (55%), Gaps = 16/233 (6%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
+P+FEKT N T + ++ + + + A G SD+S KRD ++ E
Sbjct: 233 IPIFEKTYNATISLERPADAC-ADNAQPSLHSAPAFSSGIISDYSLSLKRDPSIYEHETH 291
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
+ K+S S YG DPG + S LGR PIVTQ+T+ +QV LS+AED
Sbjct: 292 FEHKISQPGFSLYG-DPGLVGLRSTGLGRATAPIVTQVTQTMQVPLSYAEDIIGVAGSNI 350
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RRTSGA+LS+QES+ LPDEIT+EIKGTSSQVQ A+QLIQE I+N+ KE ++Y
Sbjct: 351 AYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQQLIQEFISNH---KEPTPNMYG 407
Query: 543 NADPGLSSYSHPTHHLYSTTS-------YQSQSLGG---------RGYRNFRY 653
D GL++YS Y ++S Y S S+GG GY ++RY
Sbjct: 408 KIDVGLNAYSQIAESGYPSSSFTSHLGGYGSSSIGGYGSPGAGGAGGYNSYRY 460
>ref|XP_006453243.1| hypothetical protein CICLE_v10008200mg [Citrus clementina]
gi|568840641|ref|XP_006474274.1| PREDICTED:
poly(rC)-binding protein 3-like [Citrus sinensis]
gi|557556469|gb|ESR66483.1| hypothetical protein
CICLE_v10008200mg [Citrus clementina]
Length = 466
Score = 145 bits (365), Expect = 2e-32
Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 1/212 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
LP+FEKT N + + E++ +S L Q ++++ +R++L E
Sbjct: 251 LPLFEKTYNASISQERQVETWADKS-----SLHAATQSAISTEYTPSTRRESLFLEREPQ 305
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
++S+ S +S YGQDP + + S ALGR PIVTQIT+ +Q+ +S+AED
Sbjct: 306 LESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSI 365
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RRTSGA+++VQES+ LPDEIT+EIKGTSSQVQ A+QLIQE +NN+ KE+ S Y
Sbjct: 366 ENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNH---KESITSSYG 422
Query: 543 NADPGL-SSYSHPTHHLYSTTSYQSQSLGGRG 635
D G SY + Y ++S +Q GG G
Sbjct: 423 QIDTGYRPSYPQLGNSSYPSSSLSTQPYGGYG 454
>gb|EOY29158.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 474
Score = 144 bits (363), Expect = 3e-32
Identities = 94/233 (40%), Positives = 130/233 (55%), Gaps = 16/233 (6%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
+P+FEKT + + +++ +S + + A Q G SD+S KRD L ++ E
Sbjct: 247 IPIFEKTYHAKISQERPVDAWTDRSQSS-LHSASAYQTGIGSDYSLSLKRDPL-YDREAH 304
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
++ K+ S +S YGQD G + S + R PIVTQ+ + +QV LS+AED
Sbjct: 305 LEPKIPASGLSLYGQDHGIGAIRSSGVSRAAAPIVTQMMQTMQVPLSYAEDIIGVGGSNI 364
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RR SGA+L++QES LPDEIT+EIKGT+SQVQ A+QLIQE I+++ KE A SIY
Sbjct: 365 AYIRRASGAILTIQESGGLPDEITVEIKGTTSQVQMAQQLIQEFISSH---KEPAPSIYS 421
Query: 543 NADPGLSSYSHPTHHLYSTT-------SYQSQSLGG---------RGYRNFRY 653
D GLS+YS YS+T Y S +GG GY +FRY
Sbjct: 422 KVDTGLSAYSQLPETTYSSTFASSHIGGYGSSGVGGYRSSSSSNLGGYSSFRY 474
>gb|EXC31211.1| Poly(rC)-binding protein 3 [Morus notabilis]
Length = 474
Score = 140 bits (354), Expect = 4e-31
Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 1/213 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
+P+FEK+ N+T + +++ +S+ L Q G +++ AKR+ E
Sbjct: 257 IPLFEKSYNSTISQERQVDTWADKSM-----LQASTQTGVGTNYPITAKREPYFLERETQ 311
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
++ +L S +S YGQD + GR PIVTQI + +Q+ LS+AED
Sbjct: 312 LEPQLPSSGISMYGQDTSLPGIRPTGFGRAGAPIVTQIAQTMQIPLSYAEDIIGIEGSNI 371
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RRTSGA+L+VQES+ LPDEIT+EIKGTSSQVQ A+QLIQE INN+ KE S Y
Sbjct: 372 AYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQLAQQLIQEVINNH---KEPVPSSYG 428
Query: 543 NADPGL-SSYSHPTHHLYSTTSYQSQSLGGRGY 638
D L S+YS + TTS +S G GY
Sbjct: 429 RIDTALRSNYSQLSSSYPPTTSLPPRSYSGGGY 461
>ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 416
Score = 140 bits (352), Expect = 6e-31
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 6/217 (2%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPL------AHGPQLGFHSDFSHPAKRDNLL 164
+P+FEKT N D ++ + IP A PQ+G S++S KRD +
Sbjct: 203 VPIFEKTHNAIISQDRSADA-RADKTQPSIPSLTALHSAPAPQVGIGSEYSLSLKRDPSI 261
Query: 165 FNPEIPVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXX 344
++ E +D K+ S + +GQD + LGR PIVTQ+T+ +QV LS+AED
Sbjct: 262 YDRESHLDQKIPQSGLLLFGQDSSLGGLRPTGLGRAAAPIVTQMTQTMQVPLSYAEDIIG 321
Query: 345 XXXXXXXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEA 524
RRTSGA+L++QES+ PDEIT+EIKGT+SQVQ A+QLIQE I +N+KE+
Sbjct: 322 VGGSNIAYIRRTSGAILTIQESRT-PDEITVEIKGTASQVQMAQQLIQEFI---SNQKES 377
Query: 525 ALSIYRNADPGLSSYSHPTHHLYSTTSYQSQSLGGRG 635
IY D G SSY+ Y ++S+ S +GG G
Sbjct: 378 TPGIYGKMDTGYSSYTQVAESSYPSSSFASH-IGGYG 413
>gb|EMJ24435.1| hypothetical protein PRUPE_ppa004405mg [Prunus persica]
Length = 512
Score = 139 bits (350), Expect = 1e-30
Identities = 96/253 (37%), Positives = 131/253 (51%), Gaps = 37/253 (14%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
LP+FEKT N T + +++ +SL L Q G +++S AKR++L + E
Sbjct: 267 LPLFEKTYNATISQERQPDTWADKSL-----LHTASQTGVSTNYSLSAKRESLFLDRETQ 321
Query: 183 VDSKLSHSAVSRYG----------------------------QDPGPADVGSFALGRVHT 278
++S+L + +S YG QDP + + S +GR
Sbjct: 322 LESQLPSAGISLYGKDPSIYGKDPSIYGKDPSIYGQDPSIYGQDPSLSSIRSSGIGRPGA 381
Query: 279 PIVTQITKVIQVALSFAEDXXXXXXXXXXXXRRTSGAVLSVQESKALPDEITIEIKGTSS 458
PIVTQI + +Q+ LS+AED RR+SGA+L+VQES+ LPDEIT+EIKGTSS
Sbjct: 382 PIVTQIAQTMQIPLSYAEDIIGVEGSNIAFIRRSSGAILTVQESRGLPDEITVEIKGTSS 441
Query: 459 QVQRAEQLIQESINNNNNKKEAALSIYRNADPGL-SSYSHPTHHLYSTTSYQSQSLG--- 626
QVQ A+QLIQE I N++KE S Y D G+ SSYS Y ++S SQ G
Sbjct: 442 QVQMAQQLIQEVI---NSRKEPVTSSYGRIDTGMRSSYSQLGASSYPSSSLPSQPYGGGY 498
Query: 627 -----GRGYRNFR 650
G GY FR
Sbjct: 499 GSSGLGGGYSTFR 511
>ref|XP_006355217.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 462
Score = 139 bits (349), Expect = 1e-30
Identities = 96/227 (42%), Positives = 122/227 (53%), Gaps = 10/227 (4%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQ---SLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNP 173
+PV EK N D + ES+ + S P A Q S +S RD L +
Sbjct: 241 IPVIEKMYNANISQDQLAESWADKPQSSKFQPSGPAPASQAAAVSGYSFSMNRDPYLLDC 300
Query: 174 EIPVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXX 353
E +D +L S + RYGQDPG + + GR PIVTQITKV+QV L +AED
Sbjct: 301 ETAMDFELPRSTLPRYGQDPGLGGIHTSVAGRAG-PIVTQITKVMQVPLGYAEDIIGVGG 359
Query: 354 XXXXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALS 533
RRTS A L+VQES+ +P+EITIEIKGTSS+VQ AEQLIQE INN+ KE A
Sbjct: 360 GNIAYIRRTSRAALTVQESR-VPEEITIEIKGTSSEVQAAEQLIQEFINNH---KEPAPR 415
Query: 534 IYRNADPGLSSYSHPTHHLYSTTSYQSQSLG-------GRGYRNFRY 653
+Y +P S+S S++S+ SQS G GY +RY
Sbjct: 416 MYGTREPEFGSFSRYGDPYSSSSSFPSQSFEGYGSSSLGAGYNRYRY 462
>ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 451
Score = 138 bits (347), Expect = 2e-30
Identities = 92/226 (40%), Positives = 125/226 (55%), Gaps = 10/226 (4%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLG-FHSDFSHPAKRDNLLFNPEI 179
LP+FEK N D E+++ +S H G D+ KRD LL E
Sbjct: 235 LPLFEKNYNALISLDRQAETWSDRSS------FHTTSQGRIDIDYPLSGKRDALLLERET 288
Query: 180 PVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXX 359
P +S++ S +S YGQDP + V S R PIVTQ+T+ +QV +S+AE+
Sbjct: 289 PFESQVPLSRISLYGQDPAISSVRSSVFNRSSVPIVTQVTQTMQVPISYAEEIIGIRGNN 348
Query: 360 XXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIY 539
RRTSGA+++V ES+ LPDEI +EIKGT+S+VQ A+QLIQE ++N+N KE S Y
Sbjct: 349 IEYIRRTSGAIITVNESRGLPDEIIVEIKGTASEVQMAQQLIQEFLSNHN--KEPVTSSY 406
Query: 540 RNADPGLSS-YSHPTHHLYSTTS--------YQSQSLGGRGYRNFR 650
D GL S YS + Y+++S Y S SLG GY +FR
Sbjct: 407 SKYDTGLKSVYSQLDNSPYTSSSLSAKSYGEYGSSSLG--GYSSFR 450
>emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 138 bits (347), Expect = 2e-30
Identities = 93/214 (43%), Positives = 124/214 (57%), Gaps = 2/214 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGP-QLGFHSDFSHPAKRDNLLFNPEI 179
LP+FE+T N T D ++++ +SL HG Q G SD+S PAKR++L + E
Sbjct: 270 LPLFERTYNATISQDRQSDTWADKSL------LHGTSQTGMGSDYSLPAKRESLYLDRE- 322
Query: 180 PVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXX 359
+++ HS + YGQ+ G + + S LGR PIVTQI + +Q+ LS+AED
Sbjct: 323 ---TQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGAN 379
Query: 360 XXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIY 539
RRTSGA+L+VQES+ LPDEIT+EIKGTSS QE I+N+ KE S Y
Sbjct: 380 IAYIRRTSGAILTVQESRGLPDEITVEIKGTSS---------QEFISNH---KEPVPSSY 427
Query: 540 RNADPGL-SSYSHPTHHLYSTTSYQSQSLGGRGY 638
D GL SSYS + YS++S SQ GG GY
Sbjct: 428 GKMDSGLRSSYSQLGNTSYSSSSLSSQPYGG-GY 460
>ref|XP_004168950.1| PREDICTED: uncharacterized protein LOC101231198, partial [Cucumis
sativus]
Length = 323
Score = 137 bits (344), Expect = 5e-30
Identities = 89/215 (41%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
LP+FEK+ N D TE++ +S L Q ++++ KR++L + E
Sbjct: 104 LPLFEKSFNTPASQDRQTETWADKS-----SLLTASQSIISAEYAPSTKRESLFLDREAH 158
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
DS +S S +S YGQD + S +GR PIVTQ+T+ +Q+ LS+AED
Sbjct: 159 FDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNI 218
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RR SGA+L++QES+ LPDEIT+EIKGTSSQVQ A+QLIQE++ N K+ S Y
Sbjct: 219 AFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV--NAPKEPVTSSSYG 276
Query: 543 NAD-PGL-SSYSH--PTHHLYSTTSYQSQSLGGRG 635
D GL SSYS + ++++S SQS GG G
Sbjct: 277 RLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYG 311
>ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 137 bits (344), Expect = 5e-30
Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
LP+FEK+ N D TE++ +S L Q ++++ KR++L + E
Sbjct: 251 LPLFEKSFNTPASQDRQTETWADKS-----SLLTASQSIISAEYAPSTKRESLFLDREAH 305
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
DS +S S +S YGQD + S +GR PIVTQ+T+ +Q+ LS+AED
Sbjct: 306 FDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNI 365
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RR SGA+L++QES+ LPDEIT+EIKGTSSQVQ A+QLIQE++ N K+ S Y
Sbjct: 366 AFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV--NAPKEPVTSSSYG 423
Query: 543 NADPGLSSYSH--PTHHLYSTTSYQSQSLGGRG 635
SSYS + ++++S SQS GG G
Sbjct: 424 RLXGLRSSYSQLAASGSSFTSSSLSSQSYGGYG 456
>ref|XP_004507898.1| PREDICTED: KH domain-containing protein At4g18375-like [Cicer
arietinum]
Length = 438
Score = 135 bits (339), Expect = 2e-29
Identities = 90/213 (42%), Positives = 119/213 (55%), Gaps = 2/213 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGP-QLGFHSDFSHPAKRDNLLFNPEI 179
+P+FEKTCN T D T+++ + P H Q +D KRD+ + E
Sbjct: 224 IPLFEKTCNATVSQDRQTDAWADK------PSMHSASQPSSVADIPLTTKRDSFFADRES 277
Query: 180 PVDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXX 359
+DS LS S +S YGQD + + S A R IVT + + +Q+ LS+AED
Sbjct: 278 QLDSLLSSSTMSLYGQDSSISGLRSSAFNRGSASIVTTVIQTMQIPLSYAEDIIGIQGTN 337
Query: 360 XXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIY 539
RRTSGA+L+VQES+ +PDEI +EIKGTSSQVQ A+QLIQE I+N+N EA + Y
Sbjct: 338 IDYIRRTSGAILTVQESR-VPDEIIVEIKGTSSQVQTAQQLIQEVISNHN---EAMATSY 393
Query: 540 RNADPGL-SSYSHPTHHLYSTTSYQSQSLGGRG 635
D GL SSYS Y ++S SQ G G
Sbjct: 394 SRLDTGLRSSYSQLGSSSYPSSSLASQPYNGYG 426
>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 135 bits (339), Expect = 2e-29
Identities = 90/216 (41%), Positives = 125/216 (57%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
LP+FEKT N +T D E+++ +SL L + +D + KRD++L + E
Sbjct: 227 LPLFEKTYNASTSQDRQAETWSDKSL-----LHTTSRTSIFADIPYSTKRDSVLADRESQ 281
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
+DS L S +S YGQD + V S ALGRV PIVT + + +Q+ LS+AED
Sbjct: 282 LDSFLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNI 341
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RRTSGA+L+VQES+ +PDEI +EIKGTSS+VQ A+QLIQ+ I+++ KE S Y
Sbjct: 342 EYIRRTSGAILTVQESR-VPDEIVVEIKGTSSEVQTAQQLIQDVISSH---KEPITSSYG 397
Query: 543 NADPG-LSSYSHPTHHLYSTTSYQSQSLGGRGYRNF 647
D G SSYS L +T+ SL + Y +
Sbjct: 398 RLDAGPRSSYS----QLGTTSRLPPSSLSSQPYTGY 429
>ref|XP_003533739.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 443
Score = 131 bits (329), Expect = 3e-28
Identities = 89/216 (41%), Positives = 122/216 (56%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
LP+FEKT N T D E+++ +SL L + +D KRD++L + E
Sbjct: 228 LPLFEKTYNAPTSQDRQAETWSDKSL-----LHTSSRTSIFADIPLSTKRDSVLADRESQ 282
Query: 183 VDSKLSHSAVSRYGQDPGPADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXXX 362
+D L S +S YGQD + V S ALGRV PIVT + + +Q+ LS+AED
Sbjct: 283 LDLFLPSSTMSLYGQDSSLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNI 342
Query: 363 XXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIYR 542
RRTSGA+L+VQES+ +PDEI +EIKGTSS+VQ A+QLIQ+ I+++ KE S Y
Sbjct: 343 EYIRRTSGAILTVQESR-VPDEIVVEIKGTSSEVQTAQQLIQDVISSH---KEPVTSSYG 398
Query: 543 NADP-GLSSYSHPTHHLYSTTSYQSQSLGGRGYRNF 647
D SSYS HL +T+ SL + Y +
Sbjct: 399 RLDAVPRSSYS----HLGTTSRLPPSSLSSQPYTGY 430
>ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein
[Medicago truncatula]
Length = 431
Score = 130 bits (326), Expect = 6e-28
Identities = 89/213 (41%), Positives = 117/213 (54%), Gaps = 2/213 (0%)
Frame = +3
Query: 3 LPVFEKTCNNTTMHDPVTESYNSQSLNMPIPLAHGPQLGFHSDFSHPAKRDNLLFNPEIP 182
+P+FEKTCN T D T+++ + L Q +D P KRD+ + E
Sbjct: 218 IPLFEKTCNATISQDRQTDAWADKP-----SLYSASQPSIVADI--PTKRDSFFADRESQ 270
Query: 183 VDSKLSHSAVSRYGQDPGP-ADVGSFALGRVHTPIVTQITKVIQVALSFAEDXXXXXXXX 359
+DS LS S +S YGQD + + S A R IVT + + +Q+ LS+AED
Sbjct: 271 LDSLLSSSTMSLYGQDSSSISGLRSSAFNRASASIVTTVIQTMQIPLSYAEDIIGIQGTN 330
Query: 360 XXXXRRTSGAVLSVQESKALPDEITIEIKGTSSQVQRAEQLIQESINNNNNKKEAALSIY 539
RRTSGA+L+VQES+ +PDEI +EIKGTS+QVQ A+QLIQE I N+N E S Y
Sbjct: 331 IDYIRRTSGAILTVQESR-VPDEIIVEIKGTSTQVQTAQQLIQEVITNHN---ETIASNY 386
Query: 540 RNADPGL-SSYSHPTHHLYSTTSYQSQSLGGRG 635
D GL SSYS Y ++S SQ G G
Sbjct: 387 ARLDTGLRSSYSQLGSSSYPSSSLPSQPYNGYG 419