BLASTX nr result
ID: Catharanthus22_contig00007598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00007598
(280 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 84 1e-14
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 82 1e-13
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606... 81 1e-13
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 77 3e-12
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 74 2e-11
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 73 3e-11
ref|XP_006579670.1| PREDICTED: uncharacterized protein LOC102667... 73 4e-11
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 70 2e-10
gb|EMT02085.1| Serine/threonine-protein kinase SMG1 [Aegilops ta... 70 3e-10
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr... 70 4e-10
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 70 4e-10
ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844... 69 8e-10
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana] 69 8e-10
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 69 8e-10
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 69 8e-10
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript... 69 8e-10
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 68 1e-09
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 67 2e-09
ref|XP_002332211.1| predicted protein [Populus trichocarpa] 67 2e-09
ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulga... 67 2e-09
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGVETLCTLCGQYQETMDHLYFTCK 96
NW+ ++WN IP K SFI W+ + L T DR FL LC LC ++ HL+F+C+
Sbjct: 315 NWNSVVWNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRTKAKSHAHLFFSCR 374
Query: 95 FTNEVWAQVREWAGLLRRTSTFQSTL 18
+ +VWA +R+W L R+T + Q T+
Sbjct: 375 ISLQVWANIRDWIPLHRQTISLQCTI 400
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/89 (41%), Positives = 52/89 (58%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGVETLCTLCGQYQETMDHLYFTCK 96
+W IIWN VIP K SFI W+ +RL DR FL LC LC E+ HL+F+C+
Sbjct: 286 HWSSIIWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFFSCR 345
Query: 95 FTNEVWAQVREWAGLLRRTSTFQSTLKWL 9
+ VWA +R+W L R++ + Q ++ L
Sbjct: 346 TSLRVWAHIRDWIPLKRQSISLQHSISAL 374
>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
orf147a [Beta vulgaris subsp. vulgaris]
Length = 147
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = -3
Query: 266 KIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGV--ETLCTLCGQYQETMDHLYFTCKF 93
+++ N PPK +FI W+ +LDRL T DRL G+ + LC LCG ET DHL+F C+F
Sbjct: 3 QMLCNNFSPPKCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEF 62
Query: 92 TNEVWAQVREWAGLLRRTSTFQSTLK 15
+ E+W+ + W G+ R +Q L+
Sbjct: 63 SYEIWSSLLCWLGIQRTAGDWQGVLQ 88
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLG--VETLCTLCGQYQETMDHLYFTC 99
W K +W K PK +FICWV RL T+DRL G + T+C LC ET DHL+F C
Sbjct: 154 WQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQC 213
Query: 98 KFTNEVWAQVREWAGLLRRTSTFQSTLKWLR 6
+F+NE+W+ AG + F L WL+
Sbjct: 214 QFSNEIWSFFMIRAG-MTPPHLFGPILLWLK 243
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFL--GVETLCTLCGQYQETMDHLYFTC 99
WHK IW PKF+FI W+ DRL T D++ G+ ++C LC E+ DHL+F+C
Sbjct: 1239 WHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSC 1298
Query: 98 KFTNEVWAQVREWAGLLRRTSTFQSTL 18
F++ +W ++ L R T+ F + L
Sbjct: 1299 NFSSHIWDRLTRRLLLCRYTTNFPALL 1325
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRL--GFLGVETLCTLCGQYQETMDHLYFTC 99
WHK+IW PK+SF W+ RLPT DR+ G+ T C C ET DHL+FTC
Sbjct: 1056 WHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTC 1115
Query: 98 KFTNEVWAQVREWAGLLRRTSTFQSTLK 15
FT+ +W + + TS +QS ++
Sbjct: 1116 SFTSVIWVDLARGIFKTQYTSHWQSIIE 1143
>ref|XP_006579670.1| PREDICTED: uncharacterized protein LOC102667931 [Glycine max]
Length = 126
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGV--ETLCTLCGQYQETMDHLYFTC 99
W KI + ++ + FI W+ LD+LPTKDRL GV ++ C CG ET DHL+F C
Sbjct: 41 WRKIFYGNLVRLRAKFILWMTCLDKLPTKDRLHRFGVVTDSKCVFCGLI-ETCDHLFFEC 99
Query: 98 KFTNEVWAQVREWAGLLRRTSTFQSTL 18
T +VWA + W ++R + S L
Sbjct: 100 ATTKKVWADILRWISIMRIPGGWHSEL 126
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRL---GFLGVETLCTLCGQYQETMDHLYFT 102
WHK +W K PK +FICWV +RL T+DRL GF + C LC E+ +HL+F
Sbjct: 986 WHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGF-SIPPTCVLCNDLDESREHLFFR 1044
Query: 101 CKFTNEVWA 75
C+F++E+W+
Sbjct: 1045 CQFSSEIWS 1053
>gb|EMT02085.1| Serine/threonine-protein kinase SMG1 [Aegilops tauschii]
Length = 4546
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = -3
Query: 278 CNWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGVE--TLCTLCGQYQETMDHLYF 105
CN K+IW PPK F W+ DR T +RL G++ C LCGQ ET+ HL
Sbjct: 4379 CNSWKLIWRSWAPPKVKFFHWLACQDRCWTAERLARRGLQHHPRCLLCGQEPETIGHLML 4438
Query: 104 TCKFTNEVWAQVREWAGLLRRTSTFQSTLK--WLR 6
TC FT + W +V W L +L WLR
Sbjct: 4439 TCPFTRQTWHEVLSWLRLPAPAPEHDGSLMDWWLR 4473
>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 209
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLG--VETLCTLCGQYQETMDHLYFT 102
+WHK IW K PK +FI WV + RLPT+D+L G V +LC LC + ET HL+F
Sbjct: 143 DWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDETRQHLFFD 202
Query: 101 CKFTNEV 81
C F E+
Sbjct: 203 CVFAGEI 209
>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGVETLCTLCGQYQETMDHLYFTCKF 93
WH +W P++SFI W+ V D+L T R+ GVE C C + E+ DHL+F C F
Sbjct: 81 WHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQPCVFCRERDESRDHLFFACPF 140
Query: 92 TNEVWAQVREWAGLLRR 42
T +W+++ + LLRR
Sbjct: 141 TYSIWSELT--SRLLRR 155
>ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844973 [Brachypodium
distachyon]
Length = 448
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = -3
Query: 278 CNWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLG--VETLCTLCGQYQETMDHLYF 105
CN+H++IW+ PK F W+ + +RL T DRL G + LC LCG ET HL F
Sbjct: 285 CNFHRLIWSPWALPKCRFFAWLAIQNRLWTNDRLAARGWPHQPLCKLCGVCPETAAHLLF 344
Query: 104 TCKFTNEVWAQVREW 60
C+++ +W+ V W
Sbjct: 345 DCRYSKRIWSGVSVW 359
>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
Length = 478
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRL--GFLGVETLCTLCGQYQETMDHLYFT 102
NW+K +W PK+S + W+ + +RL T DR+ G ++ C LC ET DHL+FT
Sbjct: 311 NWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFT 370
Query: 101 CKFTNEVWAQVREWAGLLRRTSTFQSTLKWL 9
C ++ EVW+ + T+ +++ LK L
Sbjct: 371 CPYSAEVWSTLTRKLLSQHFTNRWEAILKLL 401
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFL--GVETLCTLCGQYQETMDHLYFT 102
NW+K +W PK+SF+ W+ V +RL T DR+ G CTLC +ET DHL+F+
Sbjct: 1353 NWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFS 1412
Query: 101 CKFTNEVW 78
C++T+ VW
Sbjct: 1413 CQYTSYVW 1420
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDR--LGFLGVETLCTLCGQYQETMDHLYFTC 99
WHK +W PKFSF W+ V DRL T D+ L G++ C LC E+ DHL+F+C
Sbjct: 1282 WHKGVWFTHSTPKFSFCVWLAVYDRLSTGDKMLLWNRGLQGTCLLCRNATESRDHLFFSC 1341
Query: 98 KFTNEVW 78
F++EVW
Sbjct: 1342 SFSSEVW 1348
>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related family protein [Arabidopsis
thaliana]
Length = 211
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRL---GFLGVETLCTLCGQYQETMDHLYF 105
+W K IW K PK +FI WV + RL TKDR+ GF+ LC C + ET HL+F
Sbjct: 42 DWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFI-FPPLCLFCNTHDETRQHLFF 100
Query: 104 TCKFTNEVW----AQVREWAGLLRRTSTFQSTLKWLR 6
C+F EVW ++V + LL F+ ++WL+
Sbjct: 101 DCEFAREVWIYFTSRVHVFPPLL-----FEDGIRWLK 132
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGVE--TLCTLCGQYQETMDHLYFTC 99
WH I+W K P+ SF+ W+ V +L T+D+L G+ C+LC + E +HL+F C
Sbjct: 342 WHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 401
Query: 98 KFTNEVWAQVREWAGLLRRTSTFQSTLKW 12
+T +W V + + R T + ++W
Sbjct: 402 SYTKAIWWDVCDRCDIPRMTKGWDEWIRW 430
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLG--VETLCTLCGQYQETMDHLYFT 102
+WHK +W PK +FI WV +RL T+DRL G V C LC ET DHL+F
Sbjct: 581 SWHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFA 640
Query: 101 CKFTNEVW 78
C+F++ +W
Sbjct: 641 CRFSSRIW 648
>ref|XP_002332211.1| predicted protein [Populus trichocarpa]
Length = 1386
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -3
Query: 272 WHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGFLGVE--TLCTLCGQYQETMDHLYFTC 99
WH I+W K P+ SF+ W+ V +L T+D+L G+ C+LC + E +HL+F C
Sbjct: 1215 WHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFEC 1274
Query: 98 KFTNEVWAQVREWAGLLRRTSTFQSTLKW 12
+T +W V + + R T + ++W
Sbjct: 1275 SYTKAIWWDVCDRCDIPRMTKGWDEWIRW 1303
>ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435090|ref|YP_004222308.1| hypothetical protein
BevumaM_p073 [Beta vulgaris subsp. maritima]
gi|346683181|ref|YP_004842113.1| hypothetical protein
BemaM_p068 [Beta macrocarpa] gi|9049281|dbj|BAA99291.1|
orf315 [Beta vulgaris subsp. vulgaris]
gi|319439823|emb|CBJ17535.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500099|emb|CBX24917.1|
hypothetical protein [Beta macrocarpa]
Length = 315
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = -3
Query: 275 NWHKIIWNKVIPPKFSFICWVGVLDRLPTKDRLGF--LGVETLCTLCGQYQETMDHLYFT 102
+W +II N PK FI W+G+ +RL TKDR+ L + +C LCGQ E+ HL+F
Sbjct: 22 HWKRIICNNKASPKSLFITWLGIQNRLYTKDRMANWNLACDPVCVLCGQGAESAQHLFFA 81
Query: 101 CKFTNEVW 78
C+++ +VW
Sbjct: 82 CEYSQQVW 89