BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00007468
         (1564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    75   9e-39
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    74   1e-33
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    74   1e-33
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...    75   4e-29
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            75   7e-27
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    60   8e-25
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...    60   6e-24
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                   60   6e-24
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          73   6e-22
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    64   2e-21
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   102   3e-21
emb|CBI36090.3| unnamed protein product [Vitis vinifera]               68   1e-20
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660...    73   3e-20
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]    69   4e-20
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]    69   1e-19
gb|AAB82754.1| retrofit [Oryza longistaminata]                         49   1e-18
emb|CAN82754.1| hypothetical protein VITISV_034296 [Vitis vinifera]    60   7e-18
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    59   2e-17
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]    95   7e-17
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|...    47   6e-16

>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
            putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 75.5 bits (184), Expect(4) = 9e-39
 Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
 Frame = +2

Query: 1046 KSQIFPHAFVKILKTG*KSISQKN*KFSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPE 1225
            KS  F   F+   K       QK   F   G GEF SN F++H+++ GI+  +SCP TP+
Sbjct: 523  KSDFFS-VFLTFQKMVENQCQQKIASFQCDGGGEFISNQFVSHLAECGIRQLISCPYTPQ 581

Query: 1226 QNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQQNAFWNSSKYITTFP--- 1396
            QNG  ERK++H+ + G +++F   +  FL               AF+ S+      P   
Sbjct: 582  QNGIAERKHRHITELGSSMMFQGKVPQFL------------WVEAFYTSNFLCNLLPSSV 629

Query: 1397 ----------IVCKDPDYNNLPVFGSLCFPSL 1462
                      ++ K P Y +L VFG  C+P+L
Sbjct: 630  LKDQKSPYEVLMGKAPVYTSLRVFGCACYPNL 661



 Score = 72.4 bits (176), Expect(4) = 9e-39
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +1

Query: 835  QSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1014
            ++  S+C   Q GK CKLP + ++ +    L+++H DL   APV S+QG  +YVIFI ++
Sbjct: 452  KTSHSLCDACQMGKICKLPFASSDFVSSRLLERVHCDLWGPAPVVSSQGFRYYVIFIDNY 511

Query: 1015 SRFN*LYPLRKKSNFSSCF 1071
            SRF   YPLR KS+F S F
Sbjct: 512  SRFTWFYPLRLKSDFFSVF 530



 Score = 55.5 bits (132), Expect(4) = 9e-39
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
 Frame = +2

Query: 212 VVDGNKKGANNKHICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSNNDHSVHM- 388
           +  G+   +  +  CQIC K  H A +CW RFD+ ++SE   +A  A+ +S+   +  + 
Sbjct: 236 ISSGSPSDSGTRPTCQICNKYGHSAYKCWKRFDHAFQSEDFSKAFAAMRVSDQKSNPWVT 295

Query: 389 DSRATSH-------MKMMQVFCLI*NLTKGTMVFML*MEINFIAHTSETCFGKLNLRDVL 547
           DS ATSH       ++  Q +    ++  G   F+    I     TS    G L LRDVL
Sbjct: 296 DSGATSHITNSTSQLQSAQPYSGEDSVIVGNSDFLPITHIGSAVLTSNQ--GNLPLRDVL 353

Query: 548 IMPK-PKSI*FLEVKLLLSNSC*IHDF*FCH*GSKQENNREGA*EKSTVGSGL------K 706
           + P   KS+  L V  L S+   + +F       K +  ++    K T  + L      K
Sbjct: 354 VCPNITKSL--LSVSKLTSDYPCVIEFDSDGVIVKDKLTKQLL-TKGTRHNDLYLLENPK 410

Query: 707 LSSSVEAVKDSKTSSMWRRQLGHPSR 784
             +   + + + +  +W  +LGHP++
Sbjct: 411 FMACYSSRQQATSDEVWHMRLGHPNQ 436



 Score = 26.6 bits (57), Expect(4) = 9e-39
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF GYN  +K Y  ++  T  IYI+R
Sbjct: 676  CVFTGYNEKYKGYKCFHPPTGKIYINR 702


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7267767|emb|CAB81170.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1515

 Score = 73.9 bits (180), Expect(4) = 1e-33
 Identities = 44/111 (39%), Positives = 66/111 (59%)
 Frame = +1

Query: 796  IVKGKKIIDVTNWQSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSN 975
            ++K K I  V N ++  ++C   Q GK C+LP   +  +   PL++IH DL   APVTS 
Sbjct: 473  LIKTKAI--VVN-KTSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSA 529

Query: 976  QGCHFYVIFIYDHSRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
            QG  +YVIFI ++SRF   YPL+ KS+F S F   F+  ++  +  K+ +F
Sbjct: 530  QGFQYYVIFIDNYSRFTWFYPLKLKSDFFSVFVL-FQQLVENQYQHKIAMF 579



 Score = 65.1 bits (157), Expect(4) = 1e-33
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = +2

Query: 1124 FSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL- 1300
            F   G GEF S  F+ H++  GI+  +SCP TP+QNG  ER+++++ + GL+++F + + 
Sbjct: 579  FQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVP 638

Query: 1301 HLFLLD*GISYCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSLHQGGK 1477
            H   ++   +   LS+   +   S        +    P Y  L VFGS C+P L    K
Sbjct: 639  HKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAK 697



 Score = 48.5 bits (114), Expect(4) = 1e-33
 Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 23/210 (10%)
 Frame = +2

Query: 224 NKKGANNKHICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSNND----HSVHMD 391
           N  G  +K  CQICRK  H A +C+ RF+  Y  E LP A  A+ +S+ +    H    D
Sbjct: 268 NGSGNGSKPTCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPD 327

Query: 392 SRATSH-------MKMMQVFCLI*NLTKGTMVFML*MEINFIAHTSETCFGKLNLRDVLI 550
           S AT+H       ++  Q +    ++  G   F+    I  I        G L L DVL+
Sbjct: 328 SAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQ--GTLPLEDVLV 385

Query: 551 MPK-PKSI*FLEVKLLL----------SNSC*IHDF*FCH*GSKQENNREGA*EKST-VG 694
            P   KS+  L V  L           S+S  I D         Q+   +G   K   V 
Sbjct: 386 CPGITKSL--LSVSKLTDDYPCSFTFDSDSVVIKD------KRTQQLLTQGNKHKGLYVL 437

Query: 695 SGLKLSSSVEAVKDSKTSSMWRRQLGHPSR 784
             +   +     + S    +W ++LGHP++
Sbjct: 438 KDVPFQTYYSTRQQSSDDEVWHQRLGHPNK 467



 Score = 25.0 bits (53), Expect(4) = 1e-33
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF+GYN  +K Y   +  T  +YI R
Sbjct: 707  CVFLGYNNKYKGYRCLHPPTGKVYICR 733


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 73.9 bits (180), Expect(4) = 1e-33
 Identities = 44/111 (39%), Positives = 66/111 (59%)
 Frame = +1

Query: 796  IVKGKKIIDVTNWQSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSN 975
            ++K K I  V N ++  ++C   Q GK C+LP   +  +   PL++IH DL   APVTS 
Sbjct: 476  LIKTKAI--VVN-KTSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSA 532

Query: 976  QGCHFYVIFIYDHSRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
            QG  +YVIFI ++SRF   YPL+ KS+F S F   F+  ++  +  K+ +F
Sbjct: 533  QGFQYYVIFIDNYSRFTWFYPLKLKSDFFSVFVL-FQQLVENQYQHKIAMF 582



 Score = 65.1 bits (157), Expect(4) = 1e-33
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = +2

Query: 1124 FSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL- 1300
            F   G GEF S  F+ H++  GI+  +SCP TP+QNG  ER+++++ + GL+++F + + 
Sbjct: 582  FQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVP 641

Query: 1301 HLFLLD*GISYCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSLHQGGK 1477
            H   ++   +   LS+   +   S        +    P Y  L VFGS C+P L    K
Sbjct: 642  HKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAK 700



 Score = 48.5 bits (114), Expect(4) = 1e-33
 Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 23/210 (10%)
 Frame = +2

Query: 224 NKKGANNKHICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSNND----HSVHMD 391
           N  G  +K  CQICRK  H A +C+ RF+  Y  E LP A  A+ +S+ +    H    D
Sbjct: 271 NGSGNGSKPTCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPD 330

Query: 392 SRATSH-------MKMMQVFCLI*NLTKGTMVFML*MEINFIAHTSETCFGKLNLRDVLI 550
           S AT+H       ++  Q +    ++  G   F+    I  I        G L L DVL+
Sbjct: 331 SAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQ--GTLPLEDVLV 388

Query: 551 MPK-PKSI*FLEVKLLL----------SNSC*IHDF*FCH*GSKQENNREGA*EKST-VG 694
            P   KS+  L V  L           S+S  I D         Q+   +G   K   V 
Sbjct: 389 CPGITKSL--LSVSKLTDDYPCSFTFDSDSVVIKD------KRTQQLLTQGNKHKGLYVL 440

Query: 695 SGLKLSSSVEAVKDSKTSSMWRRQLGHPSR 784
             +   +     + S    +W ++LGHP++
Sbjct: 441 KDVPFQTYYSTRQQSSDDEVWHQRLGHPNK 470



 Score = 25.0 bits (53), Expect(4) = 1e-33
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF+GYN  +K Y   +  T  +YI R
Sbjct: 710  CVFLGYNNKYKGYRCLHPPTGKVYICR 736


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 75.1 bits (183), Expect(3) = 4e-29
 Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = +2

Query: 1124 FSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL- 1300
            F   G GEF SN FL H+   GIQ  +SCP TP+QNG  ER+++H+V+ GL++LF +   
Sbjct: 586  FQCDGGGEFISNQFLLHLQKNGIQQLLSCPHTPQQNGLAERRHRHIVELGLSLLFQSRAP 645

Query: 1301 HLFLLD*GISYCLLSHQQNAFWNSSKYITTFP---IVCKDPDYNNLPVFGSLCFPSL 1462
              + ++   ++   +   N   +S+   T  P   +  K P Y+ L +FG  CFP L
Sbjct: 646  QKYWVE---AFMTANFLSNLLPHSANTNTASPYEKLHNKSPSYDALRIFGCACFPML 699



 Score = 62.8 bits (151), Expect(3) = 4e-29
 Identities = 30/76 (39%), Positives = 48/76 (63%)
 Frame = +1

Query: 844  RSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRF 1023
            +S+C   Q  KS +LP S +  +   PL++IH D+   +PV S Q   +YV+ I ++SR+
Sbjct: 493  KSLCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKYYVVLIDNYSRY 552

Query: 1024 N*LYPLRKKSNFSSCF 1071
              +YP++KKS+F S F
Sbjct: 553  CWMYPMKKKSDFHSIF 568



 Score = 39.3 bits (90), Expect(3) = 4e-29
 Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 30/207 (14%)
 Frame = +2

Query: 251 ICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSN------------NDHSVHMDS 394
           +CQIC K  H A+ CW+RFD  Y+ + +  AL A+ +S+               S H+ +
Sbjct: 284 VCQICGKSGHEAMRCWHRFDNSYQLDEMHNALAAMRVSDMIDSRGGEWFPDTGASAHI-T 342

Query: 395 RATSHMKMMQVFCLI*NLTKGTMVFML*MEINFIAHTSETCF----GKLNLRDVLIMPKP 562
               H++  Q +    ++  G   ++       I HT         G L L DVL+ P+ 
Sbjct: 343 NTPHHLQNAQPYMGSDSVMVGNGEYLP------ITHTGAASIASSSGNLILNDVLVCPQI 396

Query: 563 KSI*FLEVKLLLSNSC*IHDF*FCH*GSKQENNREGA*EKSTVGSGL--KLSSSVEAVKD 736
                   K LLS S    D+     G   + +     +K+T    L  + +  + ++K+
Sbjct: 397 -------AKPLLSVSKFTTDYPC---GFDFDADNVCIYDKATKKVLLQGRNTKGLYSIKE 446

Query: 737 ------------SKTSSMWRRQLGHPS 781
                       + +  +W ++LGHP+
Sbjct: 447 PAFHAFFSTRQVAASDEVWHQRLGHPN 473


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 75.1 bits (183), Expect(3) = 7e-27
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = +2

Query: 1136 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHL-FL 1312
            G GEF SN    H++D GIQ ++SCP TP+QNG  ERK++H V+ GL+++F ++  L F 
Sbjct: 585  GGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFW 644

Query: 1313 LD*GISYCLLSHQQNAFWNSSKYITTFPIVCKD-PDYNNLPVFGSLCFPSLHQGGK 1477
            ++   +   LS+   +   S   ++    + K  P+Y  L VFG+ C+P L   G+
Sbjct: 645  VEAFFTASFLSNMLPS--PSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGE 698



 Score = 65.1 bits (157), Expect(3) = 7e-27
 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
 Frame = +1

Query: 850  ICTGYQFGKSCKLPL-SLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN 1026
            +C   Q GKS KL   S N++  D  L +IH DL   +PV S QG  +YV+F+ D+SR++
Sbjct: 490  VCEPCQMGKSSKLQFFSSNSRELDL-LGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYS 548

Query: 1027 *LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
              YPL+ KS+F + F   F++ ++  F  K+K+F
Sbjct: 549  WFYPLKAKSDFFAVFVA-FQNLVENQFNTKIKVF 581



 Score = 29.3 bits (64), Expect(3) = 7e-27
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF+GYN  +K Y   Y  T  +YISR
Sbjct: 708  CVFLGYNSQYKGYRCLYPPTGRVYISR 734


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 60.1 bits (144), Expect(3) = 8e-25
 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
 Frame = +2

Query: 1142 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD* 1321
            GEF +  F N +   GI  +VSCP T +QNG VERK++H+V+ GL++L  A++ L     
Sbjct: 563  GEFQA--FTNTLCKFGILHRVSCPSTSQQNGRVERKHRHVVEVGLSLLAHASIPLKYWPF 620

Query: 1322 GI--SYCLLSHQQNAFWN-SSKYITTFPIVCKDPDYNNLPVFGSLCFPSL 1462
                +  L++   ++  N SS Y T +  +   P+Y+ L V+G  C+P L
Sbjct: 621  AFQSALYLINRLPSSVLNFSSPYKTLYHCL---PNYSFLRVYGCTCYPFL 667



 Score = 57.0 bits (136), Expect(3) = 8e-25
 Identities = 32/92 (34%), Positives = 48/92 (52%)
 Frame = +1

Query: 850  ICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN* 1029
            +C   Q  KS +LP +L+      P   +H DL   APV    G  ++V+F+ DH+RF+ 
Sbjct: 466  VCEPCQMAKSHRLPFTLSESRASQPFALVHSDLWGPAPVVGTNGARYFVLFVDDHTRFSW 525

Query: 1030 LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKI 1125
            LY L  K    S F Q FK  ++  F  K+++
Sbjct: 526  LYLLAFKDQAISGFLQ-FKVMIETQFDTKVRM 556



 Score = 45.4 bits (106), Expect(3) = 8e-25
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
 Frame = +2

Query: 233 GANNKHICQICRKKNHVALECWYRFDYLYKSERLPQ--ALVALSLSNNDHSVHMDSRATS 406
           G+N K  CQ+C K  H+A+ C++RFD  Y+        A+VA   +  D S +MD+ AT 
Sbjct: 249 GSNGKPQCQVCGKYGHIAINCYHRFDQTYQPTMNNHLAAMVATPSTVGDESWYMDTGATH 308

Query: 407 HMKMMQVFCLI*NLTK--------GTMVFML*----MEINFIAHTSETCFGK-LNLRDVL 547
           H+          NL K        G+   M+     + I+ I H++ +   + LNL+++L
Sbjct: 309 HLTP--------NLNKLNSHTPFAGSDKVMVGNGNRLNISNIGHSTISSVSRSLNLKNIL 360

Query: 548 IMPKPKSI*FLEVKLLLSNSC*IHDF*FCH*GSKQENNREGA*EKSTVGSGL-KLSSSVE 724
            +P+  +   + V  L +++    +F F +    ++   + A  +  +  GL KLSSS  
Sbjct: 361 HVPQLTTN-LISVNRLCTDNNVTVEF-FTNGFVVKDQASKKALLQGNLNYGLYKLSSSTP 418

Query: 725 A---------------------------VKDSKTSSMWRRQLGHPSR 784
           +                           ++ S  + +W  +LGHP+R
Sbjct: 419 SRRYQDPDDNKLAGRTSLTTEVPCMSSTLQLSNKADLWHFRLGHPAR 465


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score = 60.1 bits (144), Expect(4) = 6e-24
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +2

Query: 1178 SDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GI---SYCLLSH 1348
            + +GI   VSCP T +QNG  ERK+KH+++ GL++L  A++ L   D      +Y +   
Sbjct: 599  AQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRI 658

Query: 1349 QQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSLH 1465
                  NS+     F    + PDY++L VF   C+P LH
Sbjct: 659  PSKTIQNSTPLEKLFN---QKPDYSSLRVFSCTCWPHLH 694



 Score = 50.1 bits (118), Expect(4) = 6e-24
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
 Frame = +2

Query: 233 GANNKHICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSNN--DHSVHMDSRATS 406
           G + +  CQ+C K+ H A +CWYRFD  Y ++   + LVA + ++   D + ++D+ AT 
Sbjct: 277 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVAD---EKLVAAATNSYGIDTNWYIDTGATD 333

Query: 407 HMK-MMQVFCLI*NLTKGTMVFM---L*MEINFIAHT-SETCFGKLNLRDVLIMPKPKSI 571
           H+   ++          G  +       M+I+ I HT   T    ++L +VL +P+ K  
Sbjct: 334 HITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVPQAKKN 393

Query: 572 *FLEVKLLLSNSC--*IHDF*FCH*GSKQENNREGA*EKS------TVGSGLKLSSSVEA 727
                +L   NS    +H   F     K +  R+   E         +      S++ +A
Sbjct: 394 LISASQLAADNSAFLELHSKFF---SIKDQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQA 450

Query: 728 VKDSKTS-SMWRRQLGHPS 781
           +  +K S S W  +LGHPS
Sbjct: 451 LGAAKLSLSRWHSRLGHPS 469



 Score = 41.2 bits (95), Expect(4) = 6e-24
 Identities = 28/92 (30%), Positives = 47/92 (51%)
 Frame = +1

Query: 844  RSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRF 1023
            +S+C   Q  KS +LP   +  +  FPL+ +  D+   AP +  +   +YV FI D S+F
Sbjct: 491  QSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFSKF 549

Query: 1024 N*LYPLRKKSNFSSCFCQNFKDWLKINFTEKL 1119
              +Y L+ KS     F + F+  ++  F  K+
Sbjct: 550  TWIYLLKYKSEVFEKF-KEFQALVERMFDRKI 580



 Score = 27.7 bits (60), Expect(4) = 6e-24
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF+G++  HK + F  +S+  +YISR
Sbjct: 708  CVFLGFSTHHKGFKFLDVSSGRVYISR 734


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 60.1 bits (144), Expect(4) = 6e-24
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +2

Query: 1178 SDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GI---SYCLLSH 1348
            + +GI   VSCP T +QNG  ERK+KH+++ GL++L  A++ L   D      +Y +   
Sbjct: 599  AQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRI 658

Query: 1349 QQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSLH 1465
                  NS+     F    + PDY++L VF   C+P LH
Sbjct: 659  PSKTIQNSTPLEKLFN---QKPDYSSLRVFSCTCWPHLH 694



 Score = 50.1 bits (118), Expect(4) = 6e-24
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
 Frame = +2

Query: 233 GANNKHICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSNN--DHSVHMDSRATS 406
           G + +  CQ+C K+ H A +CWYRFD  Y ++   + LVA + ++   D + ++D+ AT 
Sbjct: 277 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVAD---EKLVAAATNSYGIDTNWYIDTGATD 333

Query: 407 HMK-MMQVFCLI*NLTKGTMVFM---L*MEINFIAHT-SETCFGKLNLRDVLIMPKPKSI 571
           H+   ++          G  +       M+I+ I HT   T    ++L +VL +P+ K  
Sbjct: 334 HITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVPQAKKN 393

Query: 572 *FLEVKLLLSNSC--*IHDF*FCH*GSKQENNREGA*EKS------TVGSGLKLSSSVEA 727
                +L   NS    +H   F     K +  R+   E         +      S++ +A
Sbjct: 394 LISASQLAADNSAFLELHSKFF---SIKDQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQA 450

Query: 728 VKDSKTS-SMWRRQLGHPS 781
           +  +K S S W  +LGHPS
Sbjct: 451 LGAAKLSLSRWHSRLGHPS 469



 Score = 41.2 bits (95), Expect(4) = 6e-24
 Identities = 28/92 (30%), Positives = 47/92 (51%)
 Frame = +1

Query: 844  RSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRF 1023
            +S+C   Q  KS +LP   +  +  FPL+ +  D+   AP +  +   +YV FI D S+F
Sbjct: 491  QSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFSKF 549

Query: 1024 N*LYPLRKKSNFSSCFCQNFKDWLKINFTEKL 1119
              +Y L+ KS     F + F+  ++  F  K+
Sbjct: 550  TWIYLLKYKSEVFEKF-KEFQALVERMFDRKI 580



 Score = 27.7 bits (60), Expect(4) = 6e-24
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF+G++  HK + F  +S+  +YISR
Sbjct: 708  CVFLGFSTHHKGFKFLDVSSGRVYISR 734


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 72.8 bits (177), Expect(2) = 6e-22
 Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
 Frame = +2

Query: 1058 FPHAFVKILKTG*KSISQKN*KFSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGF 1237
            F   F+   K     +  K  +F   G GEF SN    H  + GI  ++SCP TP+QNG 
Sbjct: 558  FISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQNGV 617

Query: 1238 VERKYKHMVKTGLTILFDANLHL-FLLD*GISYCLLSH--QQNAFWNSSKYITTFPIVCK 1408
             ERK++H+V+ GL++L+ ++  L F ++   +   LS+    +     S Y T F    +
Sbjct: 618  AERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQ---Q 674

Query: 1409 DPDYNNLPVFGSLCFPSL 1462
              DY  L VFG+ C+P L
Sbjct: 675  KVDYTPLRVFGTACYPCL 692



 Score = 60.1 bits (144), Expect(2) = 6e-22
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +1

Query: 850  ICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN* 1029
            +C   Q GKS +L    ++     PL ++H DL   +PV SNQG  +Y +F+ D SRF+ 
Sbjct: 489  VCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDFSRFSW 548

Query: 1030 LYPLRKKSNFSSCF 1071
             +PLR KS F S F
Sbjct: 549  FFPLRMKSKFISVF 562


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 63.9 bits (154), Expect(4) = 2e-21
 Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = +2

Query: 1142 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL--HLFLL 1315
            GEF +  F ++++  GI+ Q SCP TPEQNG  ERK +H+++TGL +L  A+L    +L 
Sbjct: 649  GEFKA--FSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLY 706

Query: 1316 D*GISYCLLSHQQNAFWNSSKYITTFPIVC-KDPDYNNLPVFGSLCFPSLHQGGK 1477
                +  L++       N   Y + F I+  K P+Y+   +FG LC+P +    K
Sbjct: 707  AFHTAIFLINRLPTKVLN---YQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNK 758



 Score = 57.8 bits (138), Expect(4) = 2e-21
 Identities = 30/94 (31%), Positives = 49/94 (52%)
 Frame = +1

Query: 841  KRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSR 1020
            K ++C   QF KS KLP ++       PL  +H DL     + S  G  ++++F+ D SR
Sbjct: 549  KNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSR 608

Query: 1021 FN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1122
            F+ +YPL  K    S F + FK  ++  F  +++
Sbjct: 609  FSWIYPLHSKDQALSVFIK-FKSLVENQFNSRIQ 641



 Score = 26.2 bits (56), Expect(4) = 2e-21
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYL-FYYLSTNIYISR 1563
            CVF+GY+  HK Y+    L+  +Y++R
Sbjct: 768  CVFLGYSSNHKGYMCLNPLTGRLYVTR 794



 Score = 22.3 bits (46), Expect(4) = 2e-21
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 743 TSSMWRRQLGHPS 781
           T+++W  +LGHP+
Sbjct: 518 TTTLWHSRLGHPA 530


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  102 bits (255), Expect(2) = 3e-21
 Identities = 120/461 (26%), Positives = 186/461 (40%), Gaps = 52/461 (11%)
 Frame = +2

Query: 236  ANNKHICQICRKKNHVALECWYRFDYLYK-SERLPQALVALSLSN--NDHSVHMDSRATS 406
            A+ K +CQIC K+ H AL+CW+RFD  Y+ SE    A  AL +++  +D     DS AT+
Sbjct: 263  ASEKPMCQICGKRGHYALQCWHRFDDSYQHSEAAAAAFSALHITDVSDDSGWVPDSAATA 322

Query: 407  HM-----KMMQVFCLI*NLTKGTMVFML*MEINFIAHTS------ETCFGKLNLRDVLIM 553
            H+     ++ Q+   + N T      ++  + NF+  T        +  G L L+DVL+ 
Sbjct: 323  HITNNSSRLQQMQPYLGNDT------VMASDGNFLPITHIGSANLPSTSGNLPLKDVLVC 376

Query: 554  PKPKSI*FLEVKLLLSNSC*---------IHDF*FCH*GSKQENNREGA*EKSTVGSGLK 706
            P          KL     C          + D   C   +K  +  EG  +        +
Sbjct: 377  PNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYKLEN--PKFQ 434

Query: 707  LSSSVEAVKDSKTSSMWRRQLGHPSRRXXXXXXXXXXXXXXXXXXXVPFVLVINLEKVAN 886
            +  S   VK   T  +W  +LGHP+ +                           L+ +AN
Sbjct: 435  MFYSTRQVK--ATDEVWHMRLGHPNPQV--------------------------LQLLAN 466

Query: 887  FL*V*IIKFVTFRCKKYIEISRTSLLLLLIKDVI-----------------------FML 997
               + I K  +  C+    + ++S L  +  D I                       F  
Sbjct: 467  KKAIQINKSTSKMCES-CRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQY 525

Query: 998  FSFTIIPVSTSCT--P*GKSQIFPHAFVKILKTG*KSISQKN*KFSVLGSGEFNSNPFLN 1171
            +   I   S  C   P      F   F+K        +  K   F   G GEF SN FL 
Sbjct: 526  YVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQ 585

Query: 1172 HISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL-HLFLLD*GISYCLLSH 1348
            H+ + GIQ  +SCP TP+QNG  ERK++ + + GLT++F +     F ++   ++   + 
Sbjct: 586  HLQESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRFWVE---AFFTANF 642

Query: 1349 QQNAFWNSSKYITTFP---IVCKDPDYNNLPVFGSLCFPSL 1462
              N    S+   +T P   +  K PDY+ L  FG  CFP+L
Sbjct: 643  LSNLLPTSALDSSTTPYQVLFGKAPDYSALRTFGCACFPTL 683



 Score = 27.7 bits (60), Expect(2) = 3e-21
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLSTN-IYISR 1563
            C+F+GY   +K Y  ++  TN +Y+SR
Sbjct: 698  CIFLGYTEKYKGYRCFFPPTNRVYLSR 724


>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
          Length = 1273

 Score = 68.2 bits (165), Expect(2) = 1e-20
 Identities = 39/94 (41%), Positives = 55/94 (58%)
 Frame = +1

Query: 847  SICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN 1026
            S+C+  Q  K+ +LP S N       L  IH DL   +P+ SN G  +YVIFI D+SRF 
Sbjct: 1037 SLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGPSPIKSNSGFLYYVIFIDDYSRFT 1096

Query: 1027 *LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
             LYPL+ KS+F   F Q FK +++     ++K+F
Sbjct: 1097 WLYPLKFKSDFFDIFLQ-FKKFVENQHFARIKVF 1129



 Score = 60.1 bits (144), Expect(2) = 1e-20
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +2

Query: 1136 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL 1300
            G  EF +  F  H+   GI  Q+SCP TP QNG  ERK++H+ +TGLT+LF ++L
Sbjct: 1133 GGAEFTNTCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLTLLFHSHL 1187


>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
          Length = 868

 Score = 73.2 bits (178), Expect(3) = 3e-20
 Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
 Frame = +2

Query: 1136 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLL 1315
            G GEF   PF  +++DLGI  + +CP T  QNG VERK+++ V+TGL +L  + L L   
Sbjct: 695  GGGEFR--PFTKYLNDLGIVHRFTCPHTHHQNGIVERKHRYTVETGLALLAQSTLPLKFW 752

Query: 1316 D*GI---SYCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSL 1462
            D      +Y +      +  N S Y   F ++ K PDY+ L VFG  CFP L
Sbjct: 753  DHSFVTAAYLINRLPSVSLNNQSLY---FKLLNKQPDYSCLRVFGCSCFPFL 801



 Score = 45.1 bits (105), Expect(3) = 3e-20
 Identities = 29/91 (31%), Positives = 49/91 (53%)
 Frame = +1

Query: 850  ICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN* 1029
            +C+    GKS +LP SL+  +   P + +  DL   AP+ S  G ++++  +   SRF  
Sbjct: 600  LCSACCLGKSHRLPTSLSATVYSQPFELVVCDLWGPAPMQSLGGYNYFLTCVDAFSRFVW 659

Query: 1030 LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1122
            ++PLR KS+    F Q FK  +++ F   +K
Sbjct: 660  VFPLRLKSDTLPQFIQ-FKKMVELQFNYPIK 689



 Score = 28.9 bits (63), Expect(3) = 3e-20
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLSTNIYISR 1563
            C+F+GY+  HK Y     + +IYIS+
Sbjct: 816  CIFLGYSTAHKGYKCLAPNGHIYISK 841


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score = 68.6 bits (166), Expect(2) = 4e-20
 Identities = 39/104 (37%), Positives = 60/104 (57%)
 Frame = +1

Query: 817  IDVTNWQSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYV 996
            + +T+     S+C+  Q  K+ +LP S N       L  IH DL   +P+ SN G  +YV
Sbjct: 429  LSLTSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYV 488

Query: 997  IFIYDHSRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
            IFI D+SRF  LYPL+ KS+F   F Q F+ +++   + ++K+F
Sbjct: 489  IFIDDYSRFTWLYPLKFKSDFFDIFLQ-FQKFVENQHSARIKVF 531



 Score = 58.2 bits (139), Expect(2) = 4e-20
 Identities = 26/55 (47%), Positives = 36/55 (65%)
 Frame = +2

Query: 1136 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL 1300
            G  EF +  F  H+   GI  Q+SCP TP QNG  ERK++H+ +TGL +LF ++L
Sbjct: 535  GGAEFTNTCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHL 589


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score = 68.6 bits (166), Expect(2) = 1e-19
 Identities = 39/104 (37%), Positives = 60/104 (57%)
 Frame = +1

Query: 817  IDVTNWQSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYV 996
            + +T+     S+C+  Q  K+ +LP S N       L  IH DL   +P+ SN G  +YV
Sbjct: 451  LSLTSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYV 510

Query: 997  IFIYDHSRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
            IFI D+SRF  LYPL+ KS+F   F Q F+ +++   + ++K+F
Sbjct: 511  IFIDDYSRFTWLYPLKFKSDFFDIFLQ-FQKFVENQHSARIKVF 553



 Score = 56.2 bits (134), Expect(2) = 1e-19
 Identities = 29/72 (40%), Positives = 39/72 (54%)
 Frame = +2

Query: 1136 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLL 1315
            G  EF +  F  H+   GI  Q+SCP T  QNG  ERK++H+ +TGL +LF  +L     
Sbjct: 557  GGAEFTNTCFKAHLRTSGIHHQLSCPYTXAQNGRAERKHRHVTETGLALLFHXHLSPRFW 616

Query: 1316 D*GISYCLLSHQ 1351
                 +C L HQ
Sbjct: 617  VERFQHCNLYHQ 628


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 48.9 bits (115), Expect(4) = 1e-18
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
 Frame = +2

Query: 233 GANNKHICQICRKKNHVALECWYRFDYLYKSERLPQALVALSLSNN--DHSVHMDSRATS 406
           G + +  CQ+C K+ H A +CWYRFD  Y ++   + LVA + ++   D + ++D+ AT 
Sbjct: 273 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVAD---EKLVAAATNSYGIDTNWYIDTGATD 329

Query: 407 HMK-MMQVFCLI*NLTKGTMVFM---L*MEINFIAHT-SETCFGKLNLRDVLIMPKPKSI 571
           H+   ++          G  +       M+I+ I HT   T    ++L +VL +P+ K  
Sbjct: 330 HITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVPQAKKN 389

Query: 572 *FLEVKLLLSNSC--*IHDF*FCH*GSKQENNREGA*EKS------TVGSGLKLSSSVEA 727
                +L   NS    +H   F     K +  R+   E         +      S++ +A
Sbjct: 390 LISASQLAADNSAFLELHSKFF---SIKDQVTRDVLLEGKCRHGLYPIPKFFGRSTNKQA 446

Query: 728 VKDSKTS-SMWRRQLGHPS 781
           +  +K S S W  +LGHPS
Sbjct: 447 LGAAKLSLSRWHSRLGHPS 465



 Score = 44.3 bits (103), Expect(4) = 1e-18
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
 Frame = +2

Query: 1226 QNGFVERKYKHMVKTGLTILFDANLHLFLLD*GI---SYCLLSHQQNAFWNSSKYITTFP 1396
            QNG  ERK++H+V+ GL++L  A++ L   D      +Y +         NS+     F 
Sbjct: 612  QNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFN 671

Query: 1397 IVCKDPDYNNLPVFGSLCFPSL 1462
               + PDY++L VFG  C+P L
Sbjct: 672  ---QKPDYSSLRVFGCACWPHL 690



 Score = 42.7 bits (99), Expect(4) = 1e-18
 Identities = 31/101 (30%), Positives = 51/101 (50%)
 Frame = +1

Query: 844  RSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRF 1023
            +S+C   Q  KS +LP   +  +  FPL+ +  D+   AP +  +   +YV FI D S+F
Sbjct: 487  QSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFSKF 545

Query: 1024 N*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIFSVREWR 1146
              +Y L+ KS     F + F+  ++  F  K+ I    +WR
Sbjct: 546  TWIYLLKYKSEVFEKF-KEFQALVERMFDRKI-IAMQTDWR 584



 Score = 24.6 bits (52), Expect(4) = 1e-18
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1486 CVFIGYNLLHKAYLFYYLST-NIYISR 1563
            CVF+G++  HK +    +S+  +YISR
Sbjct: 705  CVFLGFSTHHKGFKCLDVSSGRVYISR 731


>emb|CAN82754.1| hypothetical protein VITISV_034296 [Vitis vinifera]
          Length = 387

 Score = 59.7 bits (143), Expect(2) = 7e-18
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
 Frame = +2

Query: 1142 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL--HLFLL 1315
            GEF +  F ++++  GI+ Q SCP TPEQNG  ERK  H+++ GL +L  A+L    +L 
Sbjct: 146  GEFKA--FSSYLAMHGIKSQFSCPYTPEQNGRAERKLXHIIEIGLALLATASLPFKFWLY 203

Query: 1316 D*GISYCLLSHQQNAFWNSSKYITTFPIV-CKDPDYNNLPVFGSLCFPSLHQGGK 1477
                +  L++       N   Y + F I+  K P+Y+   +FG LC+P +    K
Sbjct: 204  AFHTTIFLINQLPTKVLN---YQSHFQILFXKSPNYHIFKIFGCLCYPYIRPYNK 255



 Score = 59.3 bits (142), Expect(2) = 7e-18
 Identities = 31/94 (32%), Positives = 51/94 (54%)
 Frame = +1

Query: 841  KRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSR 1020
            K ++    QF KS KLP +++      PL  +H DL  LA + S  G  ++++F+ D SR
Sbjct: 46   KNNVXCACQFAKSHKLPFNVSVSRASHPLALLHADLWGLASIPSTTGARYFILFVDDFSR 105

Query: 1021 FN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1122
            F+ +YPL  K    S F + FK  ++  F  +++
Sbjct: 106  FSWIYPLHNKDQALSIFIK-FKSLVENQFNSRIQ 138


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 58.9 bits (141), Expect(3) = 2e-17
 Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
 Frame = +2

Query: 1142 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD* 1321
            GEF +  F +++++ GI  +VSCP T +QNG  ERK++ +V+ GLT+L  A+L L   D 
Sbjct: 652  GEFRA--FQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWD- 708

Query: 1322 GISYCLLSHQQNAFWNS-SKYITTFPIVCKD-PDYNNLPVFGSLCFPSL 1462
              S+  + +  N    +   +     ++ K  PDY+ L VFG  CFP+L
Sbjct: 709  -ESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNL 756



 Score = 52.0 bits (123), Expect(3) = 2e-17
 Identities = 32/92 (34%), Positives = 48/92 (52%)
 Frame = +1

Query: 847  SICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN 1026
            + C+    GK  + P SL++     PL+ IH DL     V SN G  +Y+ F+   SRF+
Sbjct: 554  NFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFS 613

Query: 1027 *LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1122
             ++ LR KS     F  NFK  +++ F  K+K
Sbjct: 614  WIFLLRNKSEAIKTFV-NFKTQVELQFDLKIK 644



 Score = 26.2 bits (56), Expect(3) = 2e-17
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 710 SSSVEAVKDSKTSSMWRRQLGHPS 781
           SS V     S T  +W ++LGHPS
Sbjct: 509 SSKVCTTSLSSTFDLWHKRLGHPS 532


>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
          Length = 1884

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 82/260 (31%), Positives = 112/260 (43%), Gaps = 27/260 (10%)
 Frame = +1

Query: 865  QFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN*LYPLR 1044
            + GKSCKLP  L NKI   PL KIH DL   AP  S QG  +Y +FI DH+R+  LYPLR
Sbjct: 442  ELGKSCKLPFGLRNKISSNPLDKIHCDLWGXAPNNSTQGYKYYXVFIDDHTRYTWLYPLR 501

Query: 1045 KKSNFSSCFCQNFKDWLKINFTEKLKIFSVREWRI*LKSVS*SY**PWYSITGFMSRNTR 1224
            +KS+F  CF + F+  ++     ++KIF                            +N  
Sbjct: 502  RKSDFFECFLK-FQILVENQLERRIKIFQSDGGG---------------EFQSIKFQNHL 545

Query: 1225 TKWLCRTKIQTYG--------ENWLNHIV*CQLTSVFIGLRHFLLPLISSTECLLEFFKI 1380
            +K     ++   G        E    HIV   LT +F    +  LPL    +  L    +
Sbjct: 546  SKCGILQQVSCPGTPEQNGVAERKHRHIVEMGLTMLF----NAKLPLSLWVDAFLTAVYL 601

Query: 1381 HHHIPNCL------------QRS*LQQLASFWIFMFSFSTSRG------KIYPCVFIGYN 1506
             + +P+ +            Q    + L  F    F +    G      K YPCVFIGY+
Sbjct: 602  INRLPSTVLKMESPFFMLFKQYPEYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYS 661

Query: 1507 LLHKAYLFYYLST-NIYISR 1563
             LHK Y   + ST  +YISR
Sbjct: 662  SLHKGYRCLHPSTKRVYISR 681



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
 Frame = +2

Query: 251 ICQICRKKNHVALECWYRFDYLYKSERLPQALVALSL--SNNDHSVHMDSRATSHM 412
           ICQIC K NH AL+CW RFDY Y+SE +PQAL A++L     D + ++DS AT+H+
Sbjct: 311 ICQICSKANHSALDCWNRFDYXYQSEEIPQALAAMALHEEEKDPNFYVDSGATAHI 366


>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
            polyprotein [Arabidopsis thaliana]
            gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
            thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
            [Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score = 47.4 bits (111), Expect(4) = 6e-16
 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
 Frame = +2

Query: 1172 HISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQ 1351
            + S  GI    S P TPE NG  ERK++H+V+TGLT+L  A++              ++ 
Sbjct: 584  YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP------------KTYW 631

Query: 1352 QNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 1462
              AF  +   I   P            +    P+Y+ L VFG  C+P L
Sbjct: 632  PYAFAVAVYLINRLPTPLLQLESPCQKLFGTSPNYDKLRVFGCACYPWL 680



 Score = 45.8 bits (107), Expect(4) = 6e-16
 Identities = 31/104 (29%), Positives = 51/104 (49%)
 Frame = +1

Query: 817  IDVTNWQSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYV 996
            + V N   K   C      KS K+P S +      PL+ I+ D+   +P+ S+    +YV
Sbjct: 469  LSVLNPSHKFLSCLDSLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYV 527

Query: 997  IFIYDHSRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1128
            IF+   +R+  LYPL++KS     F   FK+ ++  F  ++  F
Sbjct: 528  IFVDHFTRYTWLYPLKQKSQVKETFI-TFKNLVENRFQTRIGTF 570



 Score = 33.9 bits (76), Expect(4) = 6e-16
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 1438 WIFMFSFSTSRGKIYPCVFIGYNLLHKAYLFYYLSTN-IYISR 1563
            W+  ++      K   CVF+GY+L   AYL  +L T+ IYISR
Sbjct: 679  WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRIYISR 721



 Score = 24.3 bits (51), Expect(4) = 6e-16
 Identities = 49/198 (24%), Positives = 72/198 (36%), Gaps = 22/198 (11%)
 Frame = +2

Query: 254 CQICRKKNHVALECWYRFDYLYKSERL----------PQALVALSLSNNDHSVHMDSRAT 403
           CQIC  + H A  C     +L                P+A +AL    + +S  +DS AT
Sbjct: 260 CQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTLWQPRANLALGSPYSSNSWLLDSGAT 319

Query: 404 SHMKM-MQVFCLI*NLTKGTMVFML*MEINFIAHTSETCFGK----LNLRDVLIMPKPKS 568
            H+        L    T G  V ++      I+HT  T        LNL ++L +P    
Sbjct: 320 HHITSDFNNLSLHQPYTGGDDVMVVDGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHK 379

Query: 569 I*FLEVKLLLSNSC*IHDF*FCH*GSKQENNR----EGA*EKSTVGSGLKLSSSVE--AV 730
                 +L  +N   + +F       K  N      +G  +       +  S  V   A 
Sbjct: 380 NLISVYRLCNANGVSV-EFFLASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFAS 438

Query: 731 KDSK-TSSMWRRQLGHPS 781
             SK T S W  +LGHP+
Sbjct: 439 PSSKATHSSWHARLGHPA 456