BLASTX nr result
ID: Catharanthus22_contig00007137
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00007137
(1241 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 113 1e-43
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 118 2e-40
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 133 9e-33
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 96 2e-31
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 112 1e-30
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 95 2e-30
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 100 4e-30
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 96 5e-28
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 129 2e-27
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 129 3e-27
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 90 2e-26
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 100 1e-23
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 114 6e-23
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 93 2e-21
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 93 2e-21
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 93 2e-20
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 92 3e-20
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 91 4e-20
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 90 9e-20
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 95 1e-18
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 113 bits (282), Expect(4) = 1e-43
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F G +PF L +P L + Y+ LIDK+ + LSY G+L++++SV+ +
Sbjct: 133 FQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFAL 192
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRS 546
++ L P V ++ ++CR+FLW G + + VAWK +C + GGL + D
Sbjct: 193 TNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDI 252
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
WN A L K+LWN+ +K+D+LW +WI YVK + +++K ++K I+
Sbjct: 253 WNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKAIL 304
Score = 70.1 bits (170), Expect(4) = 1e-43
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = +3
Query: 756 GPFDTSLAYDFFQPLGQRKIWYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLS--FM*VD 929
G + Y Q GQRK W +++ +T P+ +FIL LA GRL T DRL M D
Sbjct: 323 GSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDD 382
Query: 930 *TCKLCNQMEESYSHLFFGCAFIKEVWRHIREWAGLRMSMSTIQMSLKWL 1079
+C C++ EES +HLFF C K VW + +W +R S L WL
Sbjct: 383 KSCCFCSE-EESMNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWL 431
Score = 38.5 bits (88), Expect(4) = 1e-43
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLITILPGF 203
++F+RGD +SV ++ A ++F GL VNP K ++ A +D + I + GF
Sbjct: 79 LLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGF 133
Score = 24.3 bits (51), Expect(4) = 1e-43
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 2 CEKLKISYLDFADD 43
C+KLKI+ L FADD
Sbjct: 64 CDKLKITNLCFADD 77
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 118 bits (296), Expect(2) = 2e-40
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Frame = +1
Query: 328 SLSYVGKLEVIHSVIQGIESF*LGILPISAVVFYRLISLCRLFLWG---GNYAR--VAWK 492
SLSY GK+E+I +VIQGI +F + I P+ V +I+ CR FLWG G + VAW
Sbjct: 115 SLSYAGKVELIRAVIQGIANFWMSIFPLPQSVLDTIIATCRNFLWGKADGGKIKPLVAWS 174
Query: 493 TMCLSKEHGGLGLKDTRSWNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWD 657
+C K+ GGLGL + + WN ALL+ ILW++H+KKD+LW R +HH Y K G VWD
Sbjct: 175 EVCTPKKEGGLGLFNLKDWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNVWD 229
Score = 75.5 bits (184), Expect(2) = 2e-40
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = +3
Query: 729 IARLSWHFGGPFDTSLA---YDFFQPLGQRKIWYIVVWNSTNWPKFSFILCLAIMGRLPT 899
+A+L + G + +LA YD+ + W ++WN K SFIL LA RL
Sbjct: 255 VAKLMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSIIWNPVIPSKMSFILWLATKNRLLA 314
Query: 900 MDRLSFM*VD*TCKLCNQMEESYSHLFFGCAFIKEVWRHIREWAGLRMSMSTIQMSLKWL 1079
+DR +F+ C LC ES++HLFF C VW HIR+W L+ ++Q S+ L
Sbjct: 315 LDRAAFLNKGFLCPLCTNEAESHAHLFFSCRTSLRVWAHIRDWIPLKRQSISLQHSISAL 374
Query: 1080 *RK 1088
R+
Sbjct: 375 IRR 377
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 133 bits (335), Expect(2) = 9e-33
Identities = 72/172 (41%), Positives = 99/172 (57%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
FS+G PF L +P L V YA L+ K++ + + SLSY GKLE+I +VIQGI
Sbjct: 85 FSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGI 144
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLW-----GGNYARVAWKTMCLSKEHGGLGLKDTRS 546
+F +GI P+ V R+ + CR FLW G VAW +C K GGLGL + +
Sbjct: 145 VNFWIGIFPLPQSVLDRINASCRNFLWGKADIGKKKPLVAWSVVCSPKREGGLGLFNLKD 204
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
WN ALL+ ILW+ H KKD+L W+HH Y + VW+ + + L+K+II
Sbjct: 205 WNLALLSCILWDFHCKKDSL---WVHHYYFRRSDVWNYNTSSSYSVLIKKII 253
Score = 35.0 bits (79), Expect(2) = 9e-33
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLITILPGF 203
M+ +RGD S+ + L+ F VLGL ++ KS+I+ +S+ E I L GF
Sbjct: 31 MLLSRGDIPSMSTMFAKLQHFCRVLGLSISSDKSSIYSSSIRTHELSHIQQLTGF 85
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 95.5 bits (236), Expect(4) = 2e-31
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Frame = +1
Query: 208 VGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGIES 387
+G +PF L +P L L++ ++ LSY G+L++I S++ +++
Sbjct: 749 LGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQN 808
Query: 388 F*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRSWN 552
+ I P+S V + +CR FLW G A VAW T+ K GG + + + WN
Sbjct: 809 YWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWN 868
Query: 553 DALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
A + K+LW I K+D LW RWIH Y+K + + + ++++I+
Sbjct: 869 RAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIV 918
Score = 56.2 bits (134), Expect(4) = 2e-31
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 753 GGPFDTSLAYDFFQPLGQRKIWYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLSFM*V-- 926
G F AY G+R W ++ N+ PK FIL + + RLPT+DR+S V
Sbjct: 936 GDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQC 995
Query: 927 D*TCKLCNQMEESYSHLFFGCAFIKEVWRHI 1019
D +LC E+ HLFF C++ VW I
Sbjct: 996 DLNYRLCRNDGETIQHLFFSCSYSAGVWSKI 1026
Score = 28.5 bits (62), Expect(4) = 2e-31
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEE 170
++F R D S+ + A + F GL + KSNI+ +D+E
Sbjct: 693 LMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDE 736
Score = 24.3 bits (51), Expect(4) = 2e-31
Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
Frame = +2
Query: 2 CEKLKISYLDFADD---FC 49
CE+L I++L FADD FC
Sbjct: 678 CERLNITHLMFADDLLMFC 696
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 112 bits (280), Expect(3) = 1e-30
Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 5/167 (2%)
Frame = +1
Query: 184 LLFCRVFSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIH 363
LL F G MPF L IP + L + Y +LIDK+ + + LSY G++++I
Sbjct: 569 LLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQ 628
Query: 364 SVIQGIESF*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLG 528
SVI +F + LP+ V R+ ++CR FLW GN + +AW+ +C K +GGL
Sbjct: 629 SVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLN 688
Query: 529 LKDTRSWNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVK 669
+ + WN + K+LWN+ K D LW +W+H Y++ +W + +K
Sbjct: 689 IINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLK 735
Score = 45.1 bits (105), Expect(3) = 1e-30
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLITILPGF 203
++F+RGD SVQ++ + F +GL VNP K NI+ S+D ++ + ++ GF
Sbjct: 521 LLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGF 575
Score = 24.6 bits (52), Expect(3) = 1e-30
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 2 CEKLKISYLDFADD 43
CEK+KI+ L FADD
Sbjct: 506 CEKMKITNLCFADD 519
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 95.1 bits (235), Expect(4) = 2e-30
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
+ G +P L +P L + Y LIDK++ + L+ G++++++ I I
Sbjct: 575 YEEGQLPVRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAI 634
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRS 546
F + LPI V ++ S+CR F+W + + +AW ++C K GGL + + +
Sbjct: 635 VQFWMQCLPIPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKV 694
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
WN + LWN+ K D LW +WIH Y+K V + V +F ++K ++
Sbjct: 695 WNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVLKNVL 746
Score = 42.0 bits (97), Expect(4) = 2e-30
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +3
Query: 762 FDTSLAYDFFQPLGQRKIWYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLSF--M*VD*T 935
F AYD R W ++ + P+ LA GRL T DRL M D
Sbjct: 768 FKMKKAYDKMME-ADRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDKI 826
Query: 936 CKLCNQMEESYSHLFFGCAFIKEVWRHIREWAGLRMSMSTIQMSLKWL 1079
LC ++EE+ +H+ F C ++W ++ G+ + L WL
Sbjct: 827 WSLCKEVEETQNHILFSCKVATDIWSNVLNRIGIDHVPQEWPLELDWL 874
Score = 38.1 bits (87), Expect(4) = 2e-30
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLI 185
++F RGD +SV+++ + F GL VNP K I+ +D ++ I
Sbjct: 521 LLFCRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKI 569
Score = 25.4 bits (54), Expect(4) = 2e-30
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
Frame = +2
Query: 2 CEKLKISYLDFADD---FC 49
CEKL I++L FADD FC
Sbjct: 506 CEKLGITHLTFADDVLLFC 524
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 99.8 bits (247), Expect(4) = 4e-30
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F G +P L +P + L V Y L++K+ + + LS G+++++ S+I I
Sbjct: 236 FEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAI 295
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRS 546
+ + + P+ V ++ S+CR F+W G+ + VAWK +C GGL L +
Sbjct: 296 AQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLEL 355
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
WN + K LWNI +K+D LW +WIH ++K V +K++ ++K ++
Sbjct: 356 WNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVM 407
Score = 38.5 bits (88), Expect(4) = 4e-30
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 816 WYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLSFM*VD*T--CKLCNQMEESYSHLFFGC 989
W+ ++ + P+ + L LA RL T RL M + C LC + +E HL F C
Sbjct: 447 WFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMNMIQCSLCSLCKEQDEDLDHLMFSC 506
Query: 990 AFIKEVW 1010
K +W
Sbjct: 507 RVTKAIW 513
Score = 37.4 bits (85), Expect(4) = 4e-30
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 42 IFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLITILPGF 203
+ RGD S++++ +A F GL++NP K +F ++ + +IT + GF
Sbjct: 183 LLCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGF 236
Score = 24.3 bits (51), Expect(4) = 4e-30
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 2 CEKLKISYLDFADD 43
CE+L I++L FADD
Sbjct: 167 CERLGITHLSFADD 180
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 96.3 bits (238), Expect(2) = 5e-28
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F VG +P L +P L DY+ L++ + K + LSY G+L +I SV+ I
Sbjct: 289 FDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSI 348
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGG-----NYARVAWKTMCLSKEHGGLGLKDTRS 546
+F L + + +C FLW G RV W +C K+ GGLGL+ +
Sbjct: 349 CNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKE 408
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKR 696
N+ K++W I + ++LW RWI +K W +Q T+ S++ R
Sbjct: 409 MNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTTTNMDSVLWR 458
Score = 56.6 bits (135), Expect(2) = 5e-28
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Frame = +3
Query: 816 WYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLSFM*--VD*TCKLCNQMEESYSHLFFGC 989
W++ +W + PKFSF LA+ RL T D++ + TC LCN E+ +HLFF C
Sbjct: 486 WHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSC 545
Query: 990 AFIKEVWRHIRE----------WAGLRMSMST 1055
+ E+W ++ + W+ + S+ST
Sbjct: 546 CYTAEIWENLAKNIYKAKFSTNWSTILTSVST 577
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 129 bits (325), Expect = 2e-27
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F++G PF L +P L V YA L+ K++ + + SLSY GKLE+I +VIQGI
Sbjct: 85 FNLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGI 144
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGG-----NYARVAWKTMCLSKEHGGLGLKDTRS 546
+F + I P+S V R+ + C FLWG N + +AW +C K+ GGLGL + +
Sbjct: 145 VNFWMKIFPLSQSVLDRINASCCNFLWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKD 204
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVK 639
WN LL++ILW+ H KKD LW RW+HH Y +
Sbjct: 205 WNLTLLSRILWDFHCKKDFLWVRWVHHYYFR 235
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 129 bits (324), Expect = 3e-27
Identities = 72/172 (41%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
FS+G PF L P L V YA L+ K+ + SLSYVGKLE+I +VIQGI
Sbjct: 118 FSLGGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGI 177
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLW-----GGNYARVAWKTMCLSKEHGGLGLKDTRS 546
+F + I P+ V R+ + C FLW G N VAW +C K+ GGLGL + +
Sbjct: 178 MNFWMRIFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKD 237
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
WN ALL+ ILW+ H KKD+L RW+HH Y + W+ + + L+K+II
Sbjct: 238 WNLALLSHILWDFHCKKDSLRVRWVHHYYFRRSDEWNYNISSSNSVLIKKII 289
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 89.7 bits (221), Expect(2) = 2e-26
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Frame = +1
Query: 208 VGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGIES 387
+G++PF L +P A L LIDK++ LSY G+L+++ +++ +++
Sbjct: 752 IGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQN 811
Query: 388 F*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRSWN 552
+ I P+ + + + CR FLW G A VAW + K GGL + + WN
Sbjct: 812 YWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWN 871
Query: 553 DALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRI 699
A + K+LW I K+D LW RW++ Y+K + ++ V ++ ++++I
Sbjct: 872 KAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKI 920
Score = 57.8 bits (138), Expect(2) = 2e-26
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 762 FDTSLAYDFFQPLGQRKIWYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLSFM*VD*T-- 935
F Y Q + +W ++ N+ PK FIL LA++ RL T +R+S D +
Sbjct: 942 FSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPL 1001
Query: 936 CKLCNQMEESYSHLFFGCAFIKEVWRHIREWAGLR 1040
CK+C E+ HLFF C + KE+W + + L+
Sbjct: 1002 CKMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQ 1036
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 100 bits (249), Expect(2) = 1e-23
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F +G +P L +P L++ +Y L++K++ + LS+ G++++I SVI G
Sbjct: 755 FPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGS 814
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNYA-----RVAWKTMCLSKEHGGLGLKDTRS 546
+F + + R+ SLC FLW GN +V+W +CL K GGLGL+
Sbjct: 815 INFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLE 874
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQ 663
WN L +++W + KD+LW W H ++ G W ++
Sbjct: 875 WNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVE 913
Score = 37.4 bits (85), Expect(2) = 1e-23
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEE 173
MIF G S+ +CE L F GLKVN KS+++LA +++ E
Sbjct: 702 MIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLE 746
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 114 bits (286), Expect = 6e-23
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
FS+G PF L +P L V YALL+ K++ + + SLSY GKLE+I +VIQGI
Sbjct: 42 FSLGDFPFRYLGVPLLSSRLNVCHYALLLSKITGLIQGWSKKSLSYAGKLELIRAVIQGI 101
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLW-----GGNYARVAWKTMCLSKEHGGLGLKDTRS 546
+F + I + V + + CR FLW G N VAW +C K+ GGLGL + +
Sbjct: 102 VNFWMEIFSLPQSVMDWINASCRNFLWGKADIGKNKPLVAWSVVCSPKKEGGLGLLNLKD 161
Query: 547 WNDALLTKILWNIHAKKDTLW 609
WN ALL++ILW+ H KKD+LW
Sbjct: 162 WNLALLSRILWDFHCKKDSLW 182
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 92.8 bits (229), Expect(2) = 2e-21
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F G P L +P L++ DY L++K+S L + +LS+ G+ ++I SVI G+
Sbjct: 615 FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGL 674
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRS 546
+F + + ++ SLC FLW G+ ++V+W CL K GGLG +
Sbjct: 675 INFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGE 734
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRIIFMK 711
WN LL +++W + + +LW +W H + W + P K ++ ++
Sbjct: 735 WNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLR 789
Score = 37.7 bits (86), Expect(2) = 2e-21
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEER 176
MIF G S+ +CE L F GLKVN KS +F A +D ER
Sbjct: 562 MIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER 607
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 92.8 bits (229), Expect(2) = 2e-21
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F G P L +P L++ DY L++K+S L + +LS+ G+ ++I SVI G+
Sbjct: 615 FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGL 674
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNY-----ARVAWKTMCLSKEHGGLGLKDTRS 546
+F + + ++ SLC FLW G+ ++V+W CL K GGLG +
Sbjct: 675 INFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGE 734
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRIIFMK 711
WN LL +++W + + +LW +W H + W + P K ++ ++
Sbjct: 735 WNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLR 789
Score = 37.7 bits (86), Expect(2) = 2e-21
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEER 176
MIF G S+ +CE L F GLKVN KS +F A +D ER
Sbjct: 562 MIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER 607
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 92.8 bits (229), Expect(3) = 2e-20
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F+ G +P L +P + DY+ L+DKV + + SLSY G+L +I+SVI +
Sbjct: 335 FASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSL 394
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGG-----NYARVAWKTMCLSKEHGGLGLKDTRS 546
+F + + A + LC FLW G A++ W ++C K+ GGLG+K
Sbjct: 395 SNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLE 454
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPS 684
N K++W + +++ +LW W+ ++ G W ++ S
Sbjct: 455 ANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGS 500
Score = 32.0 bits (71), Expect(3) = 2e-20
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLI 185
M+F G SV+ + K F G GL ++ KS ++LA + E R+ I
Sbjct: 281 MVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNI 329
Score = 22.7 bits (47), Expect(3) = 2e-20
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 2 CEKLKISYLDFADD 43
C+KL +++L FADD
Sbjct: 266 CKKLSLTHLCFADD 279
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 92.0 bits (227), Expect(3) = 3e-20
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F+ G +P L P + DY+ L+DKV + + SLSY G+L +I+SVI +
Sbjct: 904 FASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSL 963
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGG-----NYARVAWKTMCLSKEHGGLGLKDTRS 546
+F + + A + LC FLW G A++ W ++C K+ GGLG+K
Sbjct: 964 SNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLE 1023
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPS 684
N K++W + +++ +LW W+ ++ G W ++ S
Sbjct: 1024 ANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGS 1069
Score = 31.6 bits (70), Expect(3) = 3e-20
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLI 185
M+F G SV+ + K F G GL ++ KS ++LA + E R+ I
Sbjct: 850 MVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNI 898
Score = 22.7 bits (47), Expect(3) = 3e-20
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 2 CEKLKISYLDFADD 43
C+KL +++L FADD
Sbjct: 835 CKKLSLTHLCFADD 848
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 90.9 bits (224), Expect(2) = 4e-20
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
FS+G P L IP L++ D + L+D++ + + LS+ G+L++I SV+ I
Sbjct: 584 FSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSI 643
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGGNYA-----RVAWKTMCLSKEHGGLGLKDTRS 546
+ + L + V + R FLW GN + +VAW +CL K GGLG+KD
Sbjct: 644 QVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHC 703
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWD 657
WN AL+ +WN+ + W W+ +K W+
Sbjct: 704 WNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWN 740
Score = 35.4 bits (80), Expect(2) = 4e-20
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLITILPGF 203
++F GD SV+ L +A F + LK N +S IFLA +D D + + F
Sbjct: 530 LMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNF 584
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 90.1 bits (222), Expect(3) = 9e-20
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F+ G +P L +P + DY+ LI+ V + + SLSY G+L +++SVI I
Sbjct: 1059 FANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSI 1118
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGG-----NYARVAWKTMCLSKEHGGLGLKDTRS 546
+F + + A + LC FLW G A++AW ++C K+ GGLG+K
Sbjct: 1119 ANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAE 1178
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPS 684
N K++W + + + +LW WI ++ G W ++ S
Sbjct: 1179 ANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGS 1224
Score = 32.0 bits (71), Expect(3) = 9e-20
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEER 176
M+F G S++ + K F G GL+++ KS I+LA + +R
Sbjct: 1005 MVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDR 1050
Score = 22.7 bits (47), Expect(3) = 9e-20
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 2 CEKLKISYLDFADD 43
CEK+ +++L FADD
Sbjct: 990 CEKIGLTHLCFADD 1003
Score = 59.7 bits (143), Expect = 2e-06
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 750 FGGPFDTSLAYDFFQPLGQRKIWYIVVWNSTNWPKFSFILCLAIMGRLPTMDRLSFM*VD 929
F F T + ++ + ++ WY VW + PK+SF+L L + RL T DR+
Sbjct: 1332 FNKRFITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSG 1391
Query: 930 *--TCKLCNQMEESYSHLFFGCAFIKEVWRHIRE 1025
TC LCN EE+ HLFF C + VW + +
Sbjct: 1392 QLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQ 1425
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 94.7 bits (234), Expect(2) = 1e-18
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 FSVGAMPF*CLLIPWAGVYLKVVDYALLIDKVSKTLLACAGLSLSYVGKLEVIHSVIQGI 381
F +G +P L +P + DY L++K+ + + LS+ G+L++I SV+ I
Sbjct: 909 FELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSI 968
Query: 382 ESF*LGILPISAVVFYRLISLCRLFLWGG-----NYARVAWKTMCLSKEHGGLGLKDTRS 546
+F L + + + + FLW G A++AW +C KE GGLGLK +
Sbjct: 969 TNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKE 1028
Query: 547 WNDALLTKILWNIHAKKDTLWCRWIHHVYVKFGLVWDLQVKTDFPSLVKRII 702
N+ L K++W I + +D+LW +W++ ++ W ++ T S + R I
Sbjct: 1029 ANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKI 1080
Score = 26.2 bits (56), Expect(2) = 1e-18
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 39 MIFARGDYLSVQVLCEALKAFGGVLGLKVNPIKSNIFLASMDEEERDLI 185
M+F+ G S+Q + F + LK++ KS IF+A + + I
Sbjct: 855 MVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSI 903