BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00007002
         (900 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   149   2e-44
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   143   1e-41
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   137   5e-40
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   135   4e-39
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   130   7e-39
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   141   3e-38
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                141   4e-38
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   129   1e-37
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   142   1e-37
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       140   1e-37
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  132   1e-37
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   136   1e-36
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   130   3e-35
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   131   5e-35
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           131   5e-35
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   132   5e-35
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               130   1e-34
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   132   1e-34
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   130   2e-34
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   124   5e-34

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  149 bits (377), Expect(2) = 2e-44
 Identities = 73/174 (41%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L +THL FAD+L++F+RGD  S+  +     EF +ASGLQANL KS IY  G++   +  
Sbjct: 489  LDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQ 548

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
            I++  G+    +PF+YLGVPLS   L  +++ PLIEKV   I +W+   LSYAG  +++K
Sbjct: 549  IIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVK 608

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKK 896
            +V+ G+Q  W  +  IPA ++  I  LCR +LW+G       A +AW   C  K
Sbjct: 609  TVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPK 662



 Score = 57.0 bits (136), Expect(2) = 2e-44
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 238 NQEATQR--CRRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           N + TQR    +GLRQGDPMSPFLF + MEYLSR L    +   F +HPK
Sbjct: 436 NGQNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPK 485


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  143 bits (360), Expect(2) = 1e-41
 Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
 Frame = +3

Query: 390 LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
           L IT+L FAD+L++F+RGD +SV ++    + F KA+GL  N  K  +  AG++ V K  
Sbjct: 67  LKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKRE 126

Query: 570 ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
           ILE +GF  G +PF+YLGVP++   L  + Y PLI+K+   I  W+   LSYAG ++++ 
Sbjct: 127 ILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVN 186

Query: 750 SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTAC 887
           SV+  +  +WL   P P +VL +I  +CR FLW G       + VAW   C
Sbjct: 187 SVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQIC 237



 Score = 54.3 bits (129), Expect(2) = 1e-41
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           RRGLRQGDP+SP LFV+ ME L+R L +  +  DFN+HPK
Sbjct: 24  RRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNYHPK 63


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  137 bits (345), Expect(2) = 5e-40
 Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
 Frame = +3

Query: 357  LGFXXXXXXKVLGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIY 536
            L F      + LGITHL FAD++++F RGD MSV ++ H + +F   +GL  N  K  IY
Sbjct: 498  LNFNHHAKCEKLGITHLTFADDVLLFCRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIY 557

Query: 537  LAGLEEVEKSCILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLN 716
              G++   K+ I + + +  G +P RYLGVPL+   L +  Y PLI+K++  I  W+   
Sbjct: 558  FGGVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKL 617

Query: 717  LSYAGMIEVIKSVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWA-----GHAARVAWST 881
            L+  G ++++   I  I  FW+  LPIP +V+ +I ++CR F+W+        + +AW++
Sbjct: 618  LNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNS 677

Query: 882  ACLKK 896
             C  K
Sbjct: 678  VCRPK 682



 Score = 54.7 bits (130), Expect(2) = 5e-40
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           +RG+RQGDP+SP LFVV MEYL+R L +    L+FNHH K
Sbjct: 466 KRGIRQGDPISPLLFVVMMEYLNRLLVKLQLDLNFNHHAK 505


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  135 bits (339), Expect(2) = 4e-39
 Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
 Frame = +3

Query: 396  ITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSCIL 575
            IT+L FAD+L++F+RGD  SV ++      F ++ GL  N +K +IY   ++   K  +L
Sbjct: 511  ITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLL 570

Query: 576  ESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIKSV 755
              +GF  G MPFRYLG+PLS   L +  Y+ LI+K+   I  WS   LSYAG +++I+SV
Sbjct: 571  LISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSV 630

Query: 756  IQGIQCFWLGVLPIPATVLDRITTLCRKFLWAGHA-----ARVAWSTACLKK 896
            I     FW+  LP+P  V+ RI  +CR FLW G++     + +AW   C  K
Sbjct: 631  IFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPK 682



 Score = 53.9 bits (128), Expect(2) = 4e-39
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = +1

Query: 175 GIVTTFYWFAMGSKRKTMWLFNQEA--TQR--CRRGLRQGDPMSPFLFVVGMEYLSRQLN 342
           G    F  + M + R   ++FN     T+R   RRG+RQGDP+SP LF++ MEYL+R L+
Sbjct: 433 GFPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILS 492

Query: 343 QTAQHLDFNHHPK 381
           Q  +  +FN+H K
Sbjct: 493 QLDKIPNFNYHSK 505


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  130 bits (326), Expect(2) = 7e-39
 Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L ITHL FAD+L++F R D  S+  +N   ++F  ASGL A+  KS+IY  G+++     
Sbjct: 681  LNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARE 740

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
            + +      G +PFRYLGVPL+   L   + +PL+E ++     W    LSYAG +++IK
Sbjct: 741  LADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIK 800

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAGHA-----ARVAWST 881
            S++  +Q +W  + P+   V+  +  +CRKFLW G       A VAW+T
Sbjct: 801  SILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWAT 849



 Score = 58.2 bits (139), Expect(2) = 7e-39
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = +1

Query: 256 RCRRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           + R+GLRQGDPMSPFLF + MEYLSR L +     DFN HPK
Sbjct: 636 QARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPK 677


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  141 bits (355), Expect(2) = 3e-38
 Identities = 73/175 (41%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            +G+THL FAD+LM+F  G   S+  V +  KEF   SGLQ +L KS IYLAG+   ++  
Sbjct: 993  IGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQ 1052

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
             L S  F  G +P RYLG+PL    +   +Y PLIE V   I +W+  +LSYAG + ++ 
Sbjct: 1053 TLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLN 1112

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKKE 899
            SVI  I  FW+    +PA  +  I  LC  FLW+G       A++AWS+ C  K+
Sbjct: 1113 SVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKK 1167



 Score = 45.1 bits (105), Expect(2) = 3e-38
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +1

Query: 265  RGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
            RGLRQG  +SP+LFV+ M  LS  +++ A H +  +HPK
Sbjct: 951  RGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPK 989


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  141 bits (355), Expect(2) = 4e-38
 Identities = 71/177 (40%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
 Frame = +3

Query: 384 KVLGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEK 563
           K L +THL FAD+LM+F  G   SV  V +  KEF   SGL  +L KS +YLAG+ E+ +
Sbjct: 267 KKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNR 326

Query: 564 SCILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEV 743
           + IL +  F  G +P RYLG+PL    +   +Y PL++KV   I +W+  +LSYAG + +
Sbjct: 327 NNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLAL 386

Query: 744 IKSVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKKE 899
           I SVI  +  FW+    +PA  +  I  LC  FLW+G       A++ W++ C  K+
Sbjct: 387 INSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQ 443



 Score = 44.7 bits (104), Expect(2) = 4e-38
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPKVR 387
           +RGLRQG  +SP+LFV+ M  LS  ++  A H +  +HPK +
Sbjct: 226 KRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCK 267


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  129 bits (325), Expect(2) = 1e-37
 Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
 Frame = +3

Query: 396  ITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSCIL 575
            +THL FAD+L++F R D  S+  +      F KASGLQA++ KS IY  G+   E   + 
Sbjct: 686  LTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLA 745

Query: 576  ESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIKSV 755
            +      G++PFRYLGVPL+   L   + +PLI+K++     W    LSYAG ++++K++
Sbjct: 746  DRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTI 805

Query: 756  IQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAW 875
            +  +Q +W  + P+P  ++  + T CRKFLW G     + A VAW
Sbjct: 806  LYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAW 850



 Score = 54.7 bits (130), Expect(2) = 1e-37
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           ++GLRQGDP+SPFLF + MEYLSR +    +  +FN HPK
Sbjct: 641 QKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPK 680


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  142 bits (357), Expect(2) = 1e-37
 Identities = 71/171 (41%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
 Frame = +3

Query: 390 LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
           LGITHL+FAD++ +  RGD  S+ ++      F K++GLQ N AK  ++  GL       
Sbjct: 170 LGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQV 229

Query: 570 ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
           I + TGF  G +P RYLGVPLS   L V  Y PL+EK+   I  WS   LS AG I++++
Sbjct: 230 ITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVR 289

Query: 750 SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAGHA-----ARVAWSTAC 887
           S+I  I  +W+ V P+P  V+ +I ++CR F+W+G A     + VAW   C
Sbjct: 290 SIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVC 340



 Score = 42.4 bits (98), Expect(2) = 1e-37
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = +1

Query: 268 GLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHH 375
           G+ QGDP+SP LFV+ MEY +R + +  ++  FNHH
Sbjct: 129 GIWQGDPISPLLFVLMMEYFNRIMVKMQRNPSFNHH 164


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  140 bits (354), Expect(2) = 1e-37
 Identities = 73/174 (41%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L I+HL FAD++MIF  G   S+H +  TL +F   SGL+ N  KS +YLAGL ++E + 
Sbjct: 690  LSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNA 749

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
               + GF  G +P RYLG+PL    L++ EYEPL+EK++    +W    LS+AG I++I 
Sbjct: 750  NA-AYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLIS 808

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAGH-----AARVAWSTACLKK 896
            SVI G   FW+    +P   + RI +LC +FLW+G+       +V+W+  CL K
Sbjct: 809  SVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPK 862



 Score = 43.1 bits (100), Expect(2) = 1e-37
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +1

Query: 265 RGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           +GLRQGDP+SP+LFV+ ME  S  L+   +    ++HPK
Sbjct: 648 KGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPK 686


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  132 bits (331), Expect(2) = 1e-37
 Identities = 70/165 (42%), Positives = 99/165 (60%), Gaps = 1/165 (0%)
 Frame = +3

Query: 396 ITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSCIL 575
           ITHLAFAD++MIFT G+  S+  V +TL  F +ASGL  N  K++I+L GL   E S + 
Sbjct: 145 ITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLC 204

Query: 576 ESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIKSV 755
              GF  G +P RYLGV LS   L   +Y+PL+++V   I +W+   LSYAG ++++ +V
Sbjct: 205 AVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTV 264

Query: 756 IQGIQCFWLGVLPIPATVLDRITTLCRKFLW-AGHAARVAWSTAC 887
           I G+   W  +  +P     ++  LC  FLW AG   RV+W T C
Sbjct: 265 IYGMVNAWGMIFMLPKFFTKQVDRLCAGFLWGAGTTHRVSWDTCC 309



 Score = 52.0 bits (123), Expect(2) = 1e-37
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           RRGLRQGDP+SP+LF++ ME LSR L++ A     + HPK
Sbjct: 100 RRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPK 139


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  136 bits (342), Expect(2) = 1e-36
 Identities = 69/177 (38%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
 Frame = +3

Query: 384  KVLGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEK 563
            K L +THL FAD+LM+F  G   SV  V +  K+F   SGL  +L KS +YLA + E+ +
Sbjct: 836  KKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNR 895

Query: 564  SCILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEV 743
            + IL +  F  G +P RYLG PL    +   +Y PL++KV   I +W+  +LSYAG + +
Sbjct: 896  NNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLAL 955

Query: 744  IKSVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKKE 899
            I SVI  +  FW+    +PA  +  I  LC  FLW+G       A++ W++ C  K+
Sbjct: 956  INSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQ 1012



 Score = 44.7 bits (104), Expect(2) = 1e-36
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPKVR 387
           +RGLRQG  +SP+LFV+ M  LS  ++  A H +  +HPK +
Sbjct: 795 KRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCK 836


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  130 bits (328), Expect(2) = 3e-35
 Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 5/177 (2%)
 Frame = +3

Query: 384  KVLGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEK 563
            K +G+THL+FAD+LM+ + G   S+  +     EF K SGL+ +L KS +YLAGL    +
Sbjct: 694  KTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATAR 753

Query: 564  SCILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEV 743
            + + +   F  G +P RYLG+PL    L   +  PL+E+V K I +W+   LSYAG + +
Sbjct: 754  NEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNL 813

Query: 744  IKSVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKKE 899
            I SV+  I  FWL    +P   +  +  +C  FLW+G     + A+++W   C  K+
Sbjct: 814  ISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKD 870



 Score = 45.4 bits (106), Expect(2) = 3e-35
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = +1

Query: 265 RGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPKVR 387
           RGLRQG  +SP+LFV+ M+ LS+ L++ A    F +HPK +
Sbjct: 654 RGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCK 694


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  131 bits (330), Expect(2) = 5e-35
 Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L I+HL FAD++MIF  G   S+H +  TL +F   SGL+ N  KS ++ AGL+  E+  
Sbjct: 550  LSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER-I 608

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
               + GF  G  P RYLG+PL    L++ +Y PL+EK+S  + +W    LS+AG  ++I 
Sbjct: 609  TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLIS 668

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKK 896
            SVI G+  FW+    +P   + +I +LC KFLWAG      +++V+W   CL K
Sbjct: 669  SVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPK 722



 Score = 43.9 bits (102), Expect(2) = 5e-35
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 256 RCRRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           R  +GLRQGDP+SP+LFV+ ME  S+ L         ++HPK
Sbjct: 505 RSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPK 546


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  131 bits (330), Expect(2) = 5e-35
 Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L I+HL FAD++MIF  G   S+H +  TL +F   SGL+ N  KS ++ AGL+  E+  
Sbjct: 550  LSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER-I 608

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
               + GF  G  P RYLG+PL    L++ +Y PL+EK+S  + +W    LS+AG  ++I 
Sbjct: 609  TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLIS 668

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKK 896
            SVI G+  FW+    +P   + +I +LC KFLWAG      +++V+W   CL K
Sbjct: 669  SVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPK 722



 Score = 43.9 bits (102), Expect(2) = 5e-35
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 256 RCRRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           R  +GLRQGDP+SP+LFV+ ME  S+ L         ++HPK
Sbjct: 505 RSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPK 546


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  132 bits (333), Expect(2) = 5e-35
 Identities = 68/174 (39%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L ++HL FAD+L++F  GD  SV  ++     F   S L+AN+++S I+LAG++      
Sbjct: 518  LNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDS 577

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
            +L+ T F  G  P RYLG+PL  S L++ +  PL++++   I +W    LS+AG +++I+
Sbjct: 578  VLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQ 637

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAGH-----AARVAWSTACLKK 896
            SV+  IQ +W   L +P  VL  I    R FLWAG+     A +VAWS  CL K
Sbjct: 638  SVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPK 691



 Score = 42.7 bits (99), Expect(2) = 5e-35
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLS 330
           RRGLRQGDP+SP+LFV+ ME LS
Sbjct: 474 RRGLRQGDPLSPYLFVIAMEVLS 496


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  130 bits (327), Expect(2) = 1e-34
 Identities = 67/174 (38%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390 LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
           LG+THL+FAD+LM+ + G   S+  +     EF K SGL+ +L KS +Y+AG+  + K  
Sbjct: 343 LGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQE 402

Query: 570 ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
           I     F  G +P RYLG+PL    L   +Y PL+E++ K I  W+    S+AG   +IK
Sbjct: 403 IAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIK 462

Query: 750 SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKK 896
           SV+  I  FWL    +P   +  I  LC  FLW+G     H A+++W   C  K
Sbjct: 463 SVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPK 516



 Score = 43.9 bits (102), Expect(2) = 1e-34
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +1

Query: 262 RRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           +RGLRQG  +SP+LFV+ M+ LS+ L++ A    F  HPK
Sbjct: 300 KRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPK 339


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  132 bits (332), Expect(2) = 1e-34
 Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
 Frame = +3

Query: 390  LGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEKSC 569
            L I+HL FAD++MIF  G   S+H +  +L++F   SGL  N  K+ +Y AGL + E   
Sbjct: 587  LEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDS 646

Query: 570  ILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEVIK 749
             + S GF  G++P RYLG+PL    L + EY PLIEK++    +W    LS+AG ++++ 
Sbjct: 647  -MASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLA 705

Query: 750  SVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAGH-----AARVAWSTACLKK 896
            SVI GI  FW+    +P   + +I +LC +FLW+        A+VAWS  CL K
Sbjct: 706  SVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPK 759



 Score = 41.6 bits (96), Expect(2) = 1e-34
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = +1

Query: 265 RGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPK 381
           +GLRQGDPMSP+LFV+ ME  S  L          +HPK
Sbjct: 545 KGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPK 583


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  130 bits (328), Expect(2) = 2e-34
 Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 5/177 (2%)
 Frame = +3

Query: 384 KVLGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEK 563
           K +G+THL+FAD+LM+ + G   S+  +    + F K SGL+ ++ KS +Y AGL     
Sbjct: 76  KQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTSP 135

Query: 564 SCILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEV 743
             ++    F  G +P RYLG+PL    L   +Y PLIE + K I +WS   LSYAG + +
Sbjct: 136 QEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNL 195

Query: 744 IKSVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKKE 899
           I SV+  I  FW+G   +P   +  I  +C  +LW+G       A++AW+  C  K+
Sbjct: 196 ISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKD 252



 Score = 42.7 bits (99), Expect(2) = 2e-34
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = +1

Query: 265 RGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPKVR 387
           RGLRQG  +SP+LFVV M  LS+ L++      F +HP+ +
Sbjct: 36  RGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCK 76


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  124 bits (311), Expect(2) = 5e-34
 Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 5/177 (2%)
 Frame = +3

Query: 384 KVLGITHLAFADNLMIFTRGDYMSVHLVNHTLKEFGKASGLQANLAKSDIYLAGLEEVEK 563
           K LG+THL FAD+LMI T G   SV  +   +  F K SGLQ N+ K+ +Y AG+ +  +
Sbjct: 99  KNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNR 158

Query: 564 SCILESTGFHGGNMPFRYLGVPLSGSTLKVVEYEPLIEKVSKTILAWSGLNLSYAGMIEV 743
             ++    F  G +P RYLG+PL    L   +  PL E++   I  W+   LS+AG + +
Sbjct: 159 YMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNL 218

Query: 744 IKSVIQGIQCFWLGVLPIPATVLDRITTLCRKFLWAG-----HAARVAWSTACLKKE 899
           I SV+     FW+    +P+  L  I ++C  FLW+G       A+V+W   C  K+
Sbjct: 219 ISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQ 275



 Score = 47.8 bits (112), Expect(2) = 5e-34
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = +1

Query: 256 RCRRGLRQGDPMSPFLFVVGMEYLSRQLNQTAQHLDFNHHPKVR 387
           R  RG+RQG  +SP+LFV+ ME LS+ L+Q A    F  HPK +
Sbjct: 56  RSARGIRQGCALSPYLFVISMEVLSKMLDQAAGGKRFGFHPKCK 99