BLASTX nr result
ID: Catharanthus22_contig00006541
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00006541
(369 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008144858.1| photosystem I P700 chlorophyll a apoprotein ... 44 1e-06
gb|AAR30288.1| photosystem I P700 chlorophyll a apoprotein A2, p... 42 5e-06
ref|YP_007947814.1| photosystem I P700 chlorophyll a apoprotein ... 41 1e-05
gb|AGH27611.1| photosystem I P700 chlorophyll a apoprotein A2 (c... 41 1e-05
ref|NP_053895.1| photosystem I P700 chlorophyll a apoprotein A2 ... 41 1e-05
gb|AFC39954.1| photosystem I P700 chlorophyll a apoprotein A2 [P... 41 1e-05
ref|YP_536965.1| photosystem I P700 chlorophyll a apoprotein A2 ... 41 1e-05
>ref|YP_008144858.1| photosystem I P700 chlorophyll a apoprotein A2 [Grateloupia
taiwanensis] gi|513133769|gb|AGO19834.1| photosystem I
P700 chlorophyll a apoprotein A2 [Grateloupia
taiwanensis]
Length = 734
Score = 44.3 bits (103), Expect(2) = 1e-06
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L P +I TQ GS +PG L AI SLFLT+GP DF
Sbjct: 472 YGFNVLLSSPSNIATQAGSSVWLPGWLEAINSGKNSLFLTIGPGDF 517
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH T LI
Sbjct: 517 FLVHHAIALGLHTTTLI 533
>gb|AAR30288.1| photosystem I P700 chlorophyll a apoprotein A2, partial
(chloroplast) [Compsopogon caeruleus]
Length = 422
Score = 41.6 bits (96), Expect(2) = 5e-06
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L P I T GS +PG L AI SLFLT+GP DF
Sbjct: 306 YGFNILLSSPTSIATTAGSNIWLPGWLEAINSGKNSLFLTIGPGDF 351
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH+T LI
Sbjct: 351 FLVHHAIALGLHVTTLI 367
>ref|YP_007947814.1| photosystem I P700 chlorophyll a apoprotein A2 (chloroplast)
[Pyropia haitanensis] gi|456368152|gb|AGG37063.1|
photosystem I P700 chlorophyll a apoprotein A2
(chloroplast) [Pyropia haitanensis]
Length = 734
Score = 41.2 bits (95), Expect(2) = 1e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L +I TQ GS +PG L AI SLFLT+GP DF
Sbjct: 472 YGFDVLLSSSSNIATQAGSNIWLPGWLEAINSGKNSLFLTIGPGDF 517
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH T LI
Sbjct: 517 FLVHHAIALGLHTTTLI 533
>gb|AGH27611.1| photosystem I P700 chlorophyll a apoprotein A2 (chloroplast)
[Pyropia yezoensis]
Length = 734
Score = 41.2 bits (95), Expect(2) = 1e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L +I TQ GS +PG L AI SLFLT+GP DF
Sbjct: 472 YGFDVLLSSSTNIATQAGSNIWLPGWLEAINSGKNSLFLTIGPGDF 517
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH T LI
Sbjct: 517 FLVHHAIALGLHTTTLI 533
>ref|NP_053895.1| photosystem I P700 chlorophyll a apoprotein A2 [Porphyra purpurea]
gi|1709815|sp|P51285.1|PSAB_PORPU RecName:
Full=Photosystem I P700 chlorophyll a apoprotein A2;
AltName: Full=PSI-B; AltName: Full=PsaB
gi|1276751|gb|AAC08171.1| Photosystem I p700 chlorophyll
A apoprotein A2 (chloroplast) [Porphyra purpurea]
Length = 734
Score = 41.2 bits (95), Expect(2) = 1e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L +I TQ GS +PG L AI SLFLT+GP DF
Sbjct: 472 YGFDVLLSSSSNIATQAGSNIWLPGWLEAINSGKNSLFLTIGPGDF 517
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH T LI
Sbjct: 517 FLVHHAIALGLHTTALI 533
>gb|AFC39954.1| photosystem I P700 chlorophyll a apoprotein A2 [Porphyra
umbilicalis]
Length = 734
Score = 41.2 bits (95), Expect(2) = 1e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L +I TQ GS +PG L AI SLFLT+GP DF
Sbjct: 472 YGFDVLLSSSSNIATQAGSNIWLPGWLEAINSGKNSLFLTIGPGDF 517
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH T LI
Sbjct: 517 FLVHHAIALGLHTTALI 533
>ref|YP_536965.1| photosystem I P700 chlorophyll a apoprotein A2 [Pyropia yezoensis]
gi|122194696|sp|Q1XDK3.1|PSAB_PORYE RecName:
Full=Photosystem I P700 chlorophyll a apoprotein A2;
AltName: Full=PSI-B; AltName: Full=PsaB
gi|90819039|dbj|BAE92408.1| Photosystem I p700
chlorophyll A apoprotein A2 [Pyropia yezoensis]
Length = 734
Score = 41.2 bits (95), Expect(2) = 1e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 179 YGMVWILGLP*DILTQCGSKHLVPGCLNAIIGNNKSLFLTVGPRDF 316
YG +L +I TQ GS +PG L AI SLFLT+GP DF
Sbjct: 472 YGFDVLLSSSTNIATQAGSNIWLPGWLEAINSGKNSLFLTIGPGDF 517
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FLVHHAIALGLHMTILI 365
FLVHHAIALGLH T LI
Sbjct: 517 FLVHHAIALGLHTTTLI 533