BLASTX nr result

ID: Catharanthus22_contig00006527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00006527
         (476 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340761.1| PREDICTED: cell cycle checkpoint protein RAD...    84   3e-14
ref|XP_006340760.1| PREDICTED: cell cycle checkpoint protein RAD...    84   3e-14
ref|XP_004287792.1| PREDICTED: cell cycle checkpoint protein RAD...    69   9e-10
gb|EMJ06088.1| hypothetical protein PRUPE_ppa003311mg [Prunus pe...    66   6e-09
gb|EXC35327.1| Cell cycle checkpoint protein RAD17 [Morus notabi...    63   5e-08
ref|XP_002529638.1| cell cycle checkpoint protein rad17, putativ...    61   2e-07
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...    59   5e-07
emb|CBI17339.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicag...    56   6e-06
emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]    56   6e-06
ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp....    55   7e-06

>ref|XP_006340761.1| PREDICTED: cell cycle checkpoint protein RAD17-like isoform X2
           [Solanum tuberosum] gi|565347497|ref|XP_006340762.1|
           PREDICTED: cell cycle checkpoint protein RAD17-like
           isoform X3 [Solanum tuberosum]
          Length = 501

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANER--CVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSG 175
           A+RRPKLWE+E+S  RNK QM N+R     SLT +   V  TEF+P LKW+G R  E+  
Sbjct: 413 AIRRPKLWEVEQSSRRNKRQMFNQRDALPNSLTTYSQIVMATEFRPSLKWLGCRASESFQ 472

Query: 176 AYEASSDDMVEDELERLVL--TKEDTSEDEIEDW 271
           A     DDMVE++ +   L   K D+S+DEIEDW
Sbjct: 473 A-----DDMVEEDSDSTCLHEDKLDSSDDEIEDW 501


>ref|XP_006340760.1| PREDICTED: cell cycle checkpoint protein RAD17-like isoform X1
           [Solanum tuberosum]
          Length = 597

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANER--CVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSG 175
           A+RRPKLWE+E+S  RNK QM N+R     SLT +   V  TEF+P LKW+G R  E+  
Sbjct: 509 AIRRPKLWEVEQSSRRNKRQMFNQRDALPNSLTTYSQIVMATEFRPSLKWLGCRASESFQ 568

Query: 176 AYEASSDDMVEDELERLVL--TKEDTSEDEIEDW 271
           A     DDMVE++ +   L   K D+S+DEIEDW
Sbjct: 569 A-----DDMVEEDSDSTCLHEDKLDSSDDEIEDW 597


>ref|XP_004287792.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Fragaria vesca
           subsp. vesca]
          Length = 602

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANER--CVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSG 175
           AVRRPKLW++EKS + NK +M N+R      +   D TV  TE+ P  KW+G+R      
Sbjct: 521 AVRRPKLWQVEKSSFYNKKEMVNQRFSAYNGMCSSDLTVIATEYMPAFKWLGFR------ 574

Query: 176 AYEASSDDMVEDELERLVLTKEDTS-EDEIEDW 271
                +   +E+ +ER+ L  +D+  ED+IEDW
Sbjct: 575 -----AQGGLEENVERMSLGDQDSEVEDDIEDW 602


>gb|EMJ06088.1| hypothetical protein PRUPE_ppa003311mg [Prunus persica]
          Length = 586

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANER--CVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSG 175
           AVRRPK+W++E+S  RNK +M   R    + +   D TV  TE+ P+LKW+G+RT +  G
Sbjct: 502 AVRRPKVWQVEQSSLRNKKEMVKRRFGAYSGMCASDLTVIATEYTPVLKWLGFRTLQ--G 559

Query: 176 AYEASSDDMVEDELERLVLTKEDT--SEDEIEDW 271
             E       ED +E +    ++T  S+DEIE+W
Sbjct: 560 YKE-------EDNVETISFDGQETEISDDEIEEW 586


>gb|EXC35327.1| Cell cycle checkpoint protein RAD17 [Morus notabilis]
          Length = 603

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANERC--VTSLTMHDHTVDVTEFKPMLKWIGYRTP---E 166
           A+RRPKLW++E+S   NK +M   R      +T  D +V  TE+ P+ KW+   TP    
Sbjct: 515 AIRRPKLWQVEQSSLSNKKEMVKRRYDDYNGMTSSDFSVIATEYTPLFKWLWSGTPGLLP 574

Query: 167 NSGAYEASSDDMVEDELERLVLTKEDTSEDEIEDW 271
            +G  +   D M  D+ E ++      SEDEIEDW
Sbjct: 575 GNGKEDQRIDMMSLDDQETMI------SEDEIEDW 603


>ref|XP_002529638.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
           gi|223530864|gb|EEF32725.1| cell cycle checkpoint
           protein rad17, putative [Ricinus communis]
          Length = 439

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANERCVTS--LTMHDHTVDVTEFKPMLKWIGYRTP--EN 169
           A+RRPKLW+  +S+ RN+  M ++R + +   +  +    VTE+ P+LKW+G+R P  E 
Sbjct: 346 AIRRPKLWQAGQSMLRNQKAMLSQRLIANGGSSFSNVAEIVTEYVPVLKWLGHRAPGVEA 405

Query: 170 SGAYEASSDDMVEDELERLVLTK-EDTSEDEIEDW 271
              +E   ++  +D  ER+ L   E  S+DEIE+W
Sbjct: 406 HQVFE-HHNEAYDDSSERMSLEDGEQFSDDEIEEW 439


>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis
           vinifera]
          Length = 1013

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANERCVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSGAY 181
           A+RRPKLW++E+S   NK ++  +R V +L+  + +V  TE+ P+ KW+ Y        Y
Sbjct: 513 AIRRPKLWQVEQSSLHNKCEILGQRLV-ALSTSNVSVIATEYIPIFKWLRYGASGGFEDY 571

Query: 182 EA----------SSDDMVEDELERLVLTKEDTSEDEIEDW 271
           +A           +D M+ DE E       + S+DEIEDW
Sbjct: 572 QALIQGNETELDDNDSMILDEKE------NEISDDEIEDW 605


>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANERCVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSGAY 181
           A+RRPKLW++E+S   NK ++  +R V +L+  + +V  TE+ P+ KW+ Y        Y
Sbjct: 513 AIRRPKLWQVEQSSLHNKCEILGQRLV-ALSTSNVSVIATEYIPIFKWLRYGASGGFEDY 571

Query: 182 EA----------SSDDMVEDELERLVLTKEDTSEDEIEDW 271
           +A           +D M+ DE E       + S+DEIEDW
Sbjct: 572 QALIQGNETELDDNDSMILDEKE------NEISDDEIEDW 605


>ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
           gi|355523294|gb|AET03748.1| Cell cycle checkpoint
           protein RAD17 [Medicago truncatula]
          Length = 604

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANER--CVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSG 175
           A+RRPKLW++EK L   K++M  +R      L+ +  +V  TE+ PM K +G R    SG
Sbjct: 515 AIRRPKLWQVEKELSYQKNKMLRQRIPACNQLSSYHMSVMATEYMPMFKLLGNRV--GSG 572

Query: 176 AYEASSDDMVEDELERLVLTKEDTSEDEIEDW 271
             E   +  ++ +   L     + S+D+IEDW
Sbjct: 573 YDELHQESNIDIDKMSLDGEAMEISDDDIEDW 604


>emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
          Length = 1125

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2   AVRRPKLWEIEKSLWRNKHQMANERCVTSLTMHDHTVDVTEFKPMLKWIGYRTPENSGAY 181
           A+RRPKLW++E+S   NK ++  +R V +L+  + +V  TE+ PM KW+ Y        Y
Sbjct: 598 AIRRPKLWQVEQSSLHNKCEILGQRLV-ALSTSNVSVIATEYIPMFKWLRYGASGGFEDY 656

Query: 182 EA----SSDDMVEDELERLVLTKEDTSEDEIED 268
           +A    +  ++ +++   L   + + S+DEIED
Sbjct: 657 QALIQGNETELXDNDSMILXEKENEISDDEIED 689


>ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312607|gb|EFH43031.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +2

Query: 5   VRRPKLWEIEKSLWRNKHQMANERCVT--SLTMHDHTVDVTEFKPMLKWIGYRTPENSGA 178
           +R+PKLW++E+S  + K  +  +R ++     + D +V  TE+ P+LKW+ YR   ++ A
Sbjct: 507 IRKPKLWQVEQSSMQTKKNLREQRNISYEGSRVADISVMATEYSPVLKWLSYRASPDAFA 566

Query: 179 YEASSDDMVEDELERLVLTKEDTSEDEIEDW 271
                 D  E E+         + +DEI+DW
Sbjct: 567 GMGEETDEEESEI---------SEDDEIQDW 588


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