BLASTX nr result
ID: Catharanthus22_contig00006293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00006293
(3342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006576245.1| PREDICTED: uncharacterized protein LOC100809... 494 e-137
ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteo... 494 e-136
gb|EXC05639.1| ATP-dependent Clp protease proteolytic subunit-re... 491 e-136
gb|EOY11500.1| ATP-dependent caseinolytic (Clp) protease/crotona... 491 e-136
ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteo... 490 e-135
ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycin... 486 e-134
gb|ESW19016.1| hypothetical protein PHAVU_006G089800g [Phaseolus... 477 e-131
ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subun... 477 e-131
ref|XP_004302392.1| PREDICTED: ATP-dependent Clp protease proteo... 474 e-131
gb|EMJ06738.1| hypothetical protein PRUPE_ppa008579mg [Prunus pe... 474 e-131
ref|XP_006344669.1| PREDICTED: ATP-dependent Clp protease proteo... 470 e-129
ref|XP_004230237.1| PREDICTED: ATP-dependent Clp protease proteo... 464 e-127
ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabido... 459 e-126
ref|XP_002319519.1| ATP-dependent Clp protease proteolytic subun... 459 e-126
ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subun... 457 e-125
ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteo... 456 e-125
dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis... 456 e-125
ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-... 456 e-125
dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis... 454 e-125
ref|XP_004230236.1| PREDICTED: ATP-dependent Clp protease proteo... 448 e-123
>ref|XP_006576245.1| PREDICTED: uncharacterized protein LOC100809485 isoform X1 [Glycine
max]
Length = 324
Score = 494 bits (1273), Expect = e-137
Identities = 249/321 (77%), Positives = 277/321 (86%)
Frame = -2
Query: 3002 VMVTGLRVPMASSFLCSSPSLPVFNRRCLSKTVCVLNSAKIPMPPINPNDPFLSKLASVA 2823
+M LRVP ++ SP+ R L KT C +N+AKIPMPP+NP DPFLSKLAS+A
Sbjct: 3 MMAAYLRVPTSTPITPQSPTATRTKCRNL-KTSCSVNAAKIPMPPLNPKDPFLSKLASIA 61
Query: 2822 ATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXXLHG 2643
A+SP+ L+N P NSDTPP+LDIFDSPKLMATPAQVERSVSYNEH LHG
Sbjct: 62 ASSPDTLLNTPKNSDTPPFLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHG 121
Query: 2642 RIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGFAIY 2463
RIVYIGMPLVPAVTELV+AELMYLQ+MDPKEPIF+YINSTGTTRDDGETVGMETEGFAIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMYLQYMDPKEPIFIYINSTGTTRDDGETVGMETEGFAIY 181
Query: 2462 DAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPASDV 2283
DAMMQLKNEIHTVAVG+AIGQACLLL+AG+ GKRFMMPH+KAMIQQPR PSSGLMPASDV
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDV 241
Query: 2282 FIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRGQEQ 2103
IRAKEVIINRD LVKLLAKHTGNS ETVA+VMKRP+YMDATRAKEFGVID+ILWRGQE+
Sbjct: 242 LIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGQEK 301
Query: 2102 IMSDVAAPEEWDKNAGIKAFD 2040
+M+DVA+P++WDK AGIK D
Sbjct: 302 VMADVASPDDWDKGAGIKIVD 322
>ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic [Vitis vinifera]
gi|296089701|emb|CBI39520.3| unnamed protein product
[Vitis vinifera]
Length = 322
Score = 494 bits (1271), Expect = e-136
Identities = 254/325 (78%), Positives = 275/325 (84%), Gaps = 3/325 (0%)
Frame = -2
Query: 2999 MVTGLRVPMASSF-LCSSPSL--PVFNRRCLSKTVCVLNSAKIPMPPINPNDPFLSKLAS 2829
M L++PMASS SSPS P+F C K C SAKIPM PINP DPFLSKLAS
Sbjct: 1 MAASLQLPMASSIPSSSSPSTTRPIFKTHCSMKPTC---SAKIPMSPINPKDPFLSKLAS 57
Query: 2828 VAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXXL 2649
VAATSPE L+ RPS SD+ P+LD+FDSPKLMATPAQVERSVSYNEH L
Sbjct: 58 VAATSPERLLQRPSGSDSLPFLDLFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLL 117
Query: 2648 HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGFA 2469
HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEP+++YIN TGTTRDDGE VGMETEGFA
Sbjct: 118 HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTTRDDGERVGMETEGFA 177
Query: 2468 IYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPAS 2289
IYDAMMQLKNEIHTVAVGAAIGQACLLLAAG+KGKRFMMPH+KAMIQQPR PSSGLMPAS
Sbjct: 178 IYDAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRVPSSGLMPAS 237
Query: 2288 DVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRGQ 2109
DV IRAKEVI NRDTLVKLLAKHTGNS ETV+ VM+RP+YMD+T+AKEFGVIDKILWRGQ
Sbjct: 238 DVLIRAKEVITNRDTLVKLLAKHTGNSEETVSTVMRRPYYMDSTKAKEFGVIDKILWRGQ 297
Query: 2108 EQIMSDVAAPEEWDKNAGIKAFDAI 2034
E+IM+DV +PEEWDKNAGI+ D I
Sbjct: 298 EKIMADVLSPEEWDKNAGIQVVDGI 322
>gb|EXC05639.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Morus notabilis]
Length = 329
Score = 491 bits (1265), Expect = e-136
Identities = 251/330 (76%), Positives = 280/330 (84%), Gaps = 8/330 (2%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPVF-----NRRCLSKTVCVLNS---AKIPMPPINPNDPFL 2844
MV GL++P+ +S SS S F N R +T C N+ AKIP+PPINP DPFL
Sbjct: 1 MVMGLQLPITNSLPSSSSSSSPFFLGPRNPRNF-RTFCSFNAKAKAKIPVPPINPKDPFL 59
Query: 2843 SKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXX 2664
SKLASVAATSPE L++RP NS++PPYLD+FD+PKLMATPAQVERSVSYN+
Sbjct: 60 SKLASVAATSPETLLDRPVNSESPPYLDLFDAPKLMATPAQVERSVSYNDQRPSTPPPDL 119
Query: 2663 XXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGME 2484
LHGRIVYIGMPLVPAVTELV+AELMYLQWMDPKEPI++YINSTGTTRDDGETVGME
Sbjct: 120 PSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYIYINSTGTTRDDGETVGME 179
Query: 2483 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSG 2304
TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLL AG+KGKRFMMPH+KAMIQQPR PSSG
Sbjct: 180 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLLAGTKGKRFMMPHAKAMIQQPRVPSSG 239
Query: 2303 LMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKI 2124
LMPASDV IRAKE++ NRDTLVKLLAKHTGNS ETVA+VM+RPFYMDAT+AKEFGVIDK+
Sbjct: 240 LMPASDVLIRAKEIVTNRDTLVKLLAKHTGNSEETVANVMRRPFYMDATKAKEFGVIDKV 299
Query: 2123 LWRGQEQIMSDVAAPEEWDKNAGIKAFDAI 2034
LWRGQE+IMSDVA PE+WDK+AGIK D +
Sbjct: 300 LWRGQEKIMSDVAPPEDWDKSAGIKVVDGL 329
>gb|EOY11500.1| ATP-dependent caseinolytic (Clp) protease/crotonase family protein
isoform 1 [Theobroma cacao] gi|508719604|gb|EOY11501.1|
ATP-dependent caseinolytic (Clp) protease/crotonase
family protein isoform 1 [Theobroma cacao]
Length = 325
Score = 491 bits (1265), Expect = e-136
Identities = 247/323 (76%), Positives = 275/323 (85%), Gaps = 3/323 (0%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPVFNRRCLS---KTVCVLNSAKIPMPPINPNDPFLSKLAS 2829
M + L PMA S+ S V + L+ + N+AKIPMPP+NP DPFLSKLAS
Sbjct: 1 MASCLHAPMAYRIPSSASSQSVRRPKALTLSCRAFGAKNAAKIPMPPVNPKDPFLSKLAS 60
Query: 2828 VAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXXL 2649
VAA+SPE L+NRP N DTPPYLD+F+SPKLMATPAQVERSVSYNEH L
Sbjct: 61 VAASSPETLLNRPVNPDTPPYLDLFESPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLL 120
Query: 2648 HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGFA 2469
HGRIVYIGMPLVPAVTEL++AELMYLQWMDPK+PI+LYINSTGTTRDDGETVGMETEGFA
Sbjct: 121 HGRIVYIGMPLVPAVTELIVAELMYLQWMDPKQPIYLYINSTGTTRDDGETVGMETEGFA 180
Query: 2468 IYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPAS 2289
+YDA+M L+NEIHTVAVGAAIGQACLLL+AG+KGKRFMMPH+KAMIQQPR PSSGLMPAS
Sbjct: 181 MYDALMNLQNEIHTVAVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRIPSSGLMPAS 240
Query: 2288 DVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRGQ 2109
DV IRAKEVIINRD LV+LLAKHTGNS+E VA+VMKRPFYMDATRAKEFGVIDKILWRGQ
Sbjct: 241 DVLIRAKEVIINRDILVELLAKHTGNSVEMVANVMKRPFYMDATRAKEFGVIDKILWRGQ 300
Query: 2108 EQIMSDVAAPEEWDKNAGIKAFD 2040
E++M++VAAPEEWDKNAGIK D
Sbjct: 301 EKVMAEVAAPEEWDKNAGIKVMD 323
>ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Glycine max]
Length = 327
Score = 490 bits (1261), Expect = e-135
Identities = 252/323 (78%), Positives = 275/323 (85%), Gaps = 2/323 (0%)
Frame = -2
Query: 3002 VMVTGLRVPMASSFLCSSPSLPVFNRR-CLS-KTVCVLNSAKIPMPPINPNDPFLSKLAS 2829
+M LRV M +S P P RR C + KT C +N KIPMPP+NP DPFLSKLAS
Sbjct: 8 MMAAYLRVSMPTS-----PQSPTTTRRRCRNLKTSCSVNRPKIPMPPLNPKDPFLSKLAS 62
Query: 2828 VAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXXL 2649
VAA+SPE L+N P NSDT PYLDIFDSPKLMATPAQVERSVSYNEH L
Sbjct: 63 VAASSPETLLNTPKNSDTLPYLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLL 122
Query: 2648 HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGFA 2469
HGRIVYIGMPLVPAVTELV+AELMYLQ+MDPKEPI++YINSTGTTRDDGETVGMETEGFA
Sbjct: 123 HGRIVYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFA 182
Query: 2468 IYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPAS 2289
IYDAMMQLKNEIHTVAVG+AIGQACLLL+AGS GKRFMMPH+KAMIQQPR PSSGLMPAS
Sbjct: 183 IYDAMMQLKNEIHTVAVGSAIGQACLLLSAGSPGKRFMMPHAKAMIQQPRIPSSGLMPAS 242
Query: 2288 DVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRGQ 2109
DV IRAKEVIINRD LVKLLAKHTGNS ETVA+VMKRP+YMDATRAKEFGVID+ILWRGQ
Sbjct: 243 DVLIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGQ 302
Query: 2108 EQIMSDVAAPEEWDKNAGIKAFD 2040
E++M+DVA+P++WDK AGIK D
Sbjct: 303 EKVMADVASPDDWDKGAGIKIVD 325
>ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
gi|255635968|gb|ACU18330.1| unknown [Glycine max]
Length = 324
Score = 486 bits (1252), Expect = e-134
Identities = 246/321 (76%), Positives = 275/321 (85%)
Frame = -2
Query: 3002 VMVTGLRVPMASSFLCSSPSLPVFNRRCLSKTVCVLNSAKIPMPPINPNDPFLSKLASVA 2823
+M LRVP ++ SP+ R L KT C +N+AKIPMPP+NP DPFLSKLAS+A
Sbjct: 3 MMAAYLRVPTSTPITPQSPTATRTKCRNL-KTSCSVNAAKIPMPPLNPKDPFLSKLASIA 61
Query: 2822 ATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXXLHG 2643
A+SP+ L+N P NSDTPP+LDIFDSPKLMATPAQVERSVSYNEH LHG
Sbjct: 62 ASSPDTLLNTPKNSDTPPFLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHG 121
Query: 2642 RIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGFAIY 2463
RIVYIGMPLVPAVTELV+AELM LQ+MDPKE IF+YINSTGTTRDDGETVGMETEGFAIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTTRDDGETVGMETEGFAIY 181
Query: 2462 DAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPASDV 2283
DAMMQLKNEIHTVAVG+AIGQACLLL+AG+ GKRFMMPH+KAMIQQPR PSSGLMPASDV
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDV 241
Query: 2282 FIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRGQEQ 2103
IRAKEVIINRD LVKLLAKHTGNS ETVA+VMKRP+YMDATRAKEFGVID+ILWRG+E+
Sbjct: 242 LIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGREK 301
Query: 2102 IMSDVAAPEEWDKNAGIKAFD 2040
+M+DVA+P++WDK AGIK D
Sbjct: 302 VMADVASPDDWDKGAGIKIVD 322
>gb|ESW19016.1| hypothetical protein PHAVU_006G089800g [Phaseolus vulgaris]
Length = 329
Score = 477 bits (1227), Expect = e-131
Identities = 245/326 (75%), Positives = 274/326 (84%), Gaps = 5/326 (1%)
Frame = -2
Query: 3002 VMVTGLRVPMASSFLCSSPSLPVFNRRCLS-KTVCVLNSA----KIPMPPINPNDPFLSK 2838
+M LRVPM L S S RRC + +T C +N+A KIPMPP+NP DPFLSK
Sbjct: 6 MMAAYLRVPM----LTFSQSSTATTRRCRNQRTRCSVNAATNTAKIPMPPLNPKDPFLSK 61
Query: 2837 LASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXX 2658
LASVAA+SPE +N P NSDTPP+LDIFDSP LMATPAQVERSVSYNEH
Sbjct: 62 LASVAASSPETFLNPPRNSDTPPFLDIFDSPTLMATPAQVERSVSYNEHRPTRPPPDLPS 121
Query: 2657 XXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETE 2478
L+GRI+YIGMPLVPAVTELV+AELMYLQ+MDPKEPI++YINSTGTTRDDGETVGMETE
Sbjct: 122 LLLNGRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETE 181
Query: 2477 GFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLM 2298
GFAIYD+MMQLKNEIHTVAVGAAIGQACLLL+AG+ GKRFMMPH+KAMIQQPR PSSGLM
Sbjct: 182 GFAIYDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLM 241
Query: 2297 PASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILW 2118
PASDV IRAKEVIINR+ LVKLLAKHTGNS ETVA+VM+RP+YMDAT+AKEFGVID++LW
Sbjct: 242 PASDVLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVLW 301
Query: 2117 RGQEQIMSDVAAPEEWDKNAGIKAFD 2040
RGQE+IM+DVA PE+WDK AGI D
Sbjct: 302 RGQEKIMADVAPPEDWDKGAGINIVD 327
>ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis] gi|223548389|gb|EEF49880.1| ATP-dependent Clp
protease proteolytic subunit, putative [Ricinus communis]
Length = 325
Score = 477 bits (1227), Expect = e-131
Identities = 244/323 (75%), Positives = 271/323 (83%), Gaps = 3/323 (0%)
Frame = -2
Query: 2999 MVTGLR-VPMASSFLCSSPSLPVFNRRCLSKTVCVLN--SAKIPMPPINPNDPFLSKLAS 2829
M T LR +P+ + + SS S N + L + +N S+KIPMPPINP DPFLSKLAS
Sbjct: 1 MATCLRALPITTCSIPSSSSSASSNSQSLKRRNLRINCSSSKIPMPPINPKDPFLSKLAS 60
Query: 2828 VAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXXL 2649
+AA SP+ L++RP SDTPP+LD+FDSPKLMATPAQVERSVSYNEH L
Sbjct: 61 IAANSPDSLLDRPITSDTPPFLDLFDSPKLMATPAQVERSVSYNEHRPRKPPPDLPSLLL 120
Query: 2648 HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGFA 2469
HGRIVYIGMPLVPAVTELV+AELMYLQWMDPKEPI+LYINSTGTTRDDGETVGMETEGFA
Sbjct: 121 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFA 180
Query: 2468 IYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPAS 2289
IYD+MMQLKNEIHTVAVGAAIGQACLLLAAG+KGKRFMMPH+KAMIQQP+ PSSGLM AS
Sbjct: 181 IYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPKVPSSGLMAAS 240
Query: 2288 DVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRGQ 2109
DV IRAKE + NRDTLV+LLAKHT NS+ETVA+ MKRPFYMD+ RAKEFGVIDKILWRGQ
Sbjct: 241 DVLIRAKEAVTNRDTLVELLAKHTENSVETVANAMKRPFYMDSRRAKEFGVIDKILWRGQ 300
Query: 2108 EQIMSDVAAPEEWDKNAGIKAFD 2040
E+IM+DV PEEWDK AGIK D
Sbjct: 301 EKIMADVVTPEEWDKMAGIKIAD 323
>ref|XP_004302392.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 320
Score = 474 bits (1221), Expect = e-131
Identities = 240/326 (73%), Positives = 272/326 (83%), Gaps = 4/326 (1%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPVFNRRCLSKTVCVLNS---AKIPMPPINPNDPFLSKLAS 2829
M + L++P+ SS F+ T C LN+ AKIP+P INP DPFLS+LAS
Sbjct: 1 MASSLQIPICIPTCSSSRKSQTFS------TSCSLNARAKAKIPIPRINPRDPFLSRLAS 54
Query: 2828 VAATSPEILVNRPSN-SDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXX 2652
VA SPE L+NRPSN SD+ PYLDIFD PKLMATPAQVERSVSYNEH
Sbjct: 55 VAVNSPETLLNRPSNNSDSLPYLDIFDEPKLMATPAQVERSVSYNEHRPKKPPPDLPSLL 114
Query: 2651 LHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGF 2472
LHGRIVYIGMPLVPAVTEL++AELMYLQWMDPK+PI++YINSTGTTRDDGETVGME+EGF
Sbjct: 115 LHGRIVYIGMPLVPAVTELIVAELMYLQWMDPKQPIYIYINSTGTTRDDGETVGMESEGF 174
Query: 2471 AIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPA 2292
AIYDAMMQLKNEIHTVAVGAAIGQACLLLAAG+KG RFMMPH+KAMIQQPR PSSGLMPA
Sbjct: 175 AIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGNRFMMPHAKAMIQQPRVPSSGLMPA 234
Query: 2291 SDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRG 2112
SDV IRAKEVI NRDTLVKLL+KHTGNS+E V+++MKRP+YMD+T AKEFGVIDK+LWRG
Sbjct: 235 SDVLIRAKEVITNRDTLVKLLSKHTGNSVEAVSNLMKRPYYMDSTTAKEFGVIDKVLWRG 294
Query: 2111 QEQIMSDVAAPEEWDKNAGIKAFDAI 2034
QE+IM+DVA+PE+WDKNAG+K D +
Sbjct: 295 QEKIMADVASPEDWDKNAGVKVVDEL 320
>gb|EMJ06738.1| hypothetical protein PRUPE_ppa008579mg [Prunus persica]
gi|462401182|gb|EMJ06739.1| hypothetical protein
PRUPE_ppa008579mg [Prunus persica]
Length = 326
Score = 474 bits (1221), Expect = e-131
Identities = 242/326 (74%), Positives = 273/326 (83%), Gaps = 4/326 (1%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPVFNRRCLSKTVCVLNS---AKIPMPPINPNDPFLSKLAS 2829
M T L +P++ S SS SL N R + C +NS KIP+PPINP DPFLS+L+S
Sbjct: 1 MATSLHLPISIS-ATSSSSLRAKNTRRFA-AFCSINSKAKVKIPIPPINPKDPFLSRLSS 58
Query: 2828 VAATSPEILVNRP-SNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXXX 2652
VAA SPE L+NRP NSD+ PYLD+FD PKLMATPAQVERSVSYNEH
Sbjct: 59 VAANSPETLLNRPVQNSDSLPYLDLFDEPKLMATPAQVERSVSYNEHRPRKPPPDLPSLL 118
Query: 2651 LHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEGF 2472
LHGRIVYIGMPLVPAVTELV+AELMYLQWMDPK+PI++YINSTGTTRDDGETVGME+EGF
Sbjct: 119 LHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKQPIYIYINSTGTTRDDGETVGMESEGF 178
Query: 2471 AIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMPA 2292
AIYDAMMQLKNEIHTVAVGAAIGQACLLL+AG+KGKRFMMPH+KAMIQQPR PSSGLMPA
Sbjct: 179 AIYDAMMQLKNEIHTVAVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPA 238
Query: 2291 SDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWRG 2112
SDV IRAKEV+ NRD L+KLLAKHTGNS+E V +VM+RP+YMD+T AKEFGVIDKILWRG
Sbjct: 239 SDVLIRAKEVMTNRDILIKLLAKHTGNSVEAVTNVMRRPYYMDSTTAKEFGVIDKILWRG 298
Query: 2111 QEQIMSDVAAPEEWDKNAGIKAFDAI 2034
QE+IM+DVA+PEEWDK AG+K D +
Sbjct: 299 QEKIMADVASPEEWDKKAGVKVVDEL 324
>ref|XP_006344669.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Solanum tuberosum]
Length = 326
Score = 470 bits (1209), Expect = e-129
Identities = 246/329 (74%), Positives = 272/329 (82%), Gaps = 7/329 (2%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPV-----FNRRCLSKTVCVLNSAKIPMPPINPNDPFLSKL 2835
M T LR+PMASS CSS S FN RC + + +S+ IPMPP NP DPFLSKL
Sbjct: 1 MATCLRLPMASSIPCSSSSSMTLKHRSFNIRCAAYSN---SSSNIPMPPFNPKDPFLSKL 57
Query: 2834 ASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXX 2655
ASVAA +P+ L +RP NSD PP+LDI+DSPKLMATPAQVERSVSYNEH
Sbjct: 58 ASVAANNPDALFSRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRASTPPPDLPSM 117
Query: 2654 XLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEG 2475
LHGRIVYIGMPLV AVTELVIAELMYLQ+MDPK PI+LYINSTGTTRDDGETVGME EG
Sbjct: 118 LLHGRIVYIGMPLVSAVTELVIAELMYLQYMDPKAPIYLYINSTGTTRDDGETVGMEAEG 177
Query: 2474 FAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMP 2295
FAIYD+MMQL+NEIHTVAVGAAIGQACLLLAAG+KGKRFMMPH+KAMIQQPRAPSSGLM
Sbjct: 178 FAIYDSMMQLQNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRAPSSGLMQ 237
Query: 2294 ASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWR 2115
ASDV+IRAKEVI+NRDTLVKLLAKHT NS ETV++VM+RP+YMD+ +A+EFGVIDKILWR
Sbjct: 238 ASDVYIRAKEVIVNRDTLVKLLAKHTENSEETVSNVMRRPYYMDSIKAREFGVIDKILWR 297
Query: 2114 G--QEQIMSDVAAPEEWDKNAGIKAFDAI 2034
G QEQIM+ V APE WD AGIK DAI
Sbjct: 298 GQEQEQIMASVDAPEVWDNKAGIKVADAI 326
>ref|XP_004230237.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like isoform 2 [Solanum
lycopersicum]
Length = 326
Score = 464 bits (1194), Expect = e-127
Identities = 242/328 (73%), Positives = 270/328 (82%), Gaps = 7/328 (2%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPV-----FNRRCLSKTVCVLNSAKIPMPPINPNDPFLSKL 2835
M T LR+PMASS CSS S FN RC + + +S+ IPMPP NP DPFLSKL
Sbjct: 1 MATCLRLPMASSIPCSSSSSMTLKHRSFNFRCAAYSN---SSSNIPMPPFNPKDPFLSKL 57
Query: 2834 ASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXX 2655
ASVAA +P+ L +RP NSD PP+LDI+DSPKLMATPAQVERSVSYNEH
Sbjct: 58 ASVAANNPDALFSRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRASTPPPDLPSM 117
Query: 2654 XLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEG 2475
LHGRIVYIGMPLV AVTELVIAELMYLQ+MDPK PI+LYINSTGTTRDDGETVGME EG
Sbjct: 118 LLHGRIVYIGMPLVSAVTELVIAELMYLQYMDPKAPIYLYINSTGTTRDDGETVGMEAEG 177
Query: 2474 FAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMP 2295
FAIYD+MMQL+NEIHTVAVGAAIGQACLLLAAG+KGKRFMMPH+KAMIQQPRAPSSGLM
Sbjct: 178 FAIYDSMMQLQNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRAPSSGLMQ 237
Query: 2294 ASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWR 2115
ASDV+IRAKEV++NRD LVKLLAKHT NS ETV++VM+RP+YMD+ +A+EFGVIDKILWR
Sbjct: 238 ASDVYIRAKEVLVNRDNLVKLLAKHTENSEETVSNVMRRPYYMDSIKAREFGVIDKILWR 297
Query: 2114 G--QEQIMSDVAAPEEWDKNAGIKAFDA 2037
G QEQI++ V APE WD AGIK DA
Sbjct: 298 GQEQEQIIASVDAPEVWDNRAGIKVADA 325
>ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata] gi|297338325|gb|EFH68742.1| ClpP protease complex
subunit ClpR3 [Arabidopsis lyrata subsp. lyrata]
Length = 332
Score = 459 bits (1180), Expect = e-126
Identities = 235/330 (71%), Positives = 269/330 (81%), Gaps = 4/330 (1%)
Frame = -2
Query: 3011 SCEVMVTGLRVPMASSFLCSSP-SLPVFNRRCLSKTVCVLN---SAKIPMPPINPNDPFL 2844
SC + +P +SSF P SL RR L SAKIPMPPINP DPFL
Sbjct: 3 SCLQVSMNSLLPRSSSFSPHPPLSLNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDPFL 62
Query: 2843 SKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXX 2664
S LAS+AA SPE L+NRP N+D PPYLDIFDSP+LM++PAQVERSV+YNEH
Sbjct: 63 STLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDL 122
Query: 2663 XXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGME 2484
L GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPI++YINSTGTTRDDGETVGME
Sbjct: 123 PSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGME 182
Query: 2483 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSG 2304
+EGFAIYD++MQLKNE+HTV VGAAIGQACLLL+AG+KG RFMMPH+KAMIQQPR PSSG
Sbjct: 183 SEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGNRFMMPHAKAMIQQPRVPSSG 242
Query: 2303 LMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKI 2124
LMPASDV IRAKEVI NRD LV+LLAKHTGNS+ETVA+VM+RP+YMDA +AKEFGVIDKI
Sbjct: 243 LMPASDVLIRAKEVITNRDILVELLAKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDKI 302
Query: 2123 LWRGQEQIMSDVAAPEEWDKNAGIKAFDAI 2034
LWRGQE+I++DV EE+DKNAGIK+ + +
Sbjct: 303 LWRGQEKIIADVVPSEEFDKNAGIKSVERV 332
>ref|XP_002319519.1| ATP-dependent Clp protease proteolytic subunit family protein
[Populus trichocarpa] gi|118486796|gb|ABK95233.1| unknown
[Populus trichocarpa] gi|222857895|gb|EEE95442.1|
ATP-dependent Clp protease proteolytic subunit family
protein [Populus trichocarpa]
Length = 341
Score = 459 bits (1180), Expect = e-126
Identities = 228/287 (79%), Positives = 252/287 (87%), Gaps = 2/287 (0%)
Frame = -2
Query: 2894 NSAKIPMPPINPNDPFLSKLASVAATSPEILVNRP--SNSDTPPYLDIFDSPKLMATPAQ 2721
+S+ IPMPPINP DPFLSKLAS+AATSP+ L+ S SDTPPYLDIF+SPKLMATPAQ
Sbjct: 53 SSSNIPMPPINPKDPFLSKLASIAATSPDSLLQDSPVSGSDTPPYLDIFESPKLMATPAQ 112
Query: 2720 VERSVSYNEHXXXXXXXXXXXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIF 2541
VERSVSYNEH LHGRIVYIGMPLV AVTELV+AELMYLQWMDPK PI+
Sbjct: 113 VERSVSYNEHRPRTPPPDLPSLLLHGRIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIY 172
Query: 2540 LYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKR 2361
+YINSTGTTRDDGE+VGMETEGFAIYD+MMQLKNEIHTVAVGAAIGQACLLLAAG+KG R
Sbjct: 173 IYINSTGTTRDDGESVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHR 232
Query: 2360 FMMPHSKAMIQQPRAPSSGLMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMK 2181
+MMPH+KAMIQQPR PSSGLMPASDV IRAKE +INRD L +LLAKHTGNS+ETVA+VMK
Sbjct: 233 YMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEAVINRDVLTELLAKHTGNSVETVANVMK 292
Query: 2180 RPFYMDATRAKEFGVIDKILWRGQEQIMSDVAAPEEWDKNAGIKAFD 2040
RPFYMD+ RAKEFGVIDKILW+GQE+IM+DV PE+WDK+AGIK D
Sbjct: 293 RPFYMDSRRAKEFGVIDKILWQGQEKIMADVLPPEDWDKSAGIKVAD 339
>ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana] gi|332190278|gb|AEE28399.1|
ATP-dependent Clp protease proteolytic subunit-related
protein 3 [Arabidopsis thaliana]
Length = 370
Score = 457 bits (1176), Expect = e-125
Identities = 226/300 (75%), Positives = 258/300 (86%)
Frame = -2
Query: 2891 SAKIPMPPINPNDPFLSKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVER 2712
SAKIPMPPINP DPFLS LAS+AA SPE L+NRP N+D PPYLDIFDSP+LM++PAQVER
Sbjct: 47 SAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVER 106
Query: 2711 SVSYNEHXXXXXXXXXXXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYI 2532
SV+YNEH L GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPI++YI
Sbjct: 107 SVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYI 166
Query: 2531 NSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMM 2352
NSTGTTRDDGETVGME+EGFAIYD++MQLKNE+HTV VGAAIGQACLLL+AG+KGKRFMM
Sbjct: 167 NSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMM 226
Query: 2351 PHSKAMIQQPRAPSSGLMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPF 2172
PH+KAMIQQPR PSSGLMPASDV IRAKEVI NRD LV+LL+KHTGNS+ETVA+VM+RP+
Sbjct: 227 PHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPY 286
Query: 2171 YMDATRAKEFGVIDKILWRGQEQIMSDVAAPEEWDKNAGIKAFDAI*LFPRWMLTRRLIR 1992
YMDA +AKEFGVID+ILWRGQE+I++DV EE+DKNAGIK+ W T RL +
Sbjct: 287 YMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKS-------ASWRRTNRLTK 339
>ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
gi|449490882|ref|XP_004158737.1| PREDICTED: ATP-dependent
Clp protease proteolytic subunit-related protein 3,
chloroplastic-like [Cucumis sativus]
Length = 331
Score = 456 bits (1173), Expect = e-125
Identities = 230/329 (69%), Positives = 272/329 (82%), Gaps = 9/329 (2%)
Frame = -2
Query: 2999 MVTGLRVPMASSF----LCSSPSLPVFNRRCLS-KTVCVLNS---AKIPMPPINPNDPFL 2844
M TG+++PM + ++PS R ++ +TV LN+ AK+P+PPINP DPFL
Sbjct: 1 MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFL 60
Query: 2843 SKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXX 2664
SKLASVA+TSPE L+NRP+NS++PPYLDIFD+P+LMA PAQVERS+SYNEH
Sbjct: 61 SKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPAQVERSISYNEHRSRRPPPDL 120
Query: 2663 XXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGME 2484
LHGRIVYIGMPLVPAVTELVIA++MYLQWMDPKEP++LYINSTGTTRDDGE V ME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAME 180
Query: 2483 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSG 2304
+EGFAIYDA+MQ KNEIHTV VGAA+G ACLLLAAG+KG+R+ MPH+KAMIQQP PS G
Sbjct: 181 SEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYG 240
Query: 2303 LMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMK-RPFYMDATRAKEFGVIDK 2127
LMPASDV IRAKEV+ NRDTLVKLLAKHT NS+ETVA+VMK P+YMD+ +AKEFGVIDK
Sbjct: 241 LMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK 300
Query: 2126 ILWRGQEQIMSDVAAPEEWDKNAGIKAFD 2040
ILWRGQE+IM+D+A+PE+WDK AGIK D
Sbjct: 301 ILWRGQEKIMADMASPEDWDKGAGIKVQD 329
>dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 315
Score = 456 bits (1173), Expect = e-125
Identities = 222/282 (78%), Positives = 253/282 (89%)
Frame = -2
Query: 2891 SAKIPMPPINPNDPFLSKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVER 2712
SAKIPMPPINP DPFLS LAS+AA SPE L+NRP N+D PPYLDIFDSP+LM++PAQVER
Sbjct: 32 SAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVER 91
Query: 2711 SVSYNEHXXXXXXXXXXXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYI 2532
SV+YNEH L GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPI++YI
Sbjct: 92 SVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYI 151
Query: 2531 NSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMM 2352
NSTGTTRDDGETVGME+EGFAIYD++MQLKNE+HTV VGAAIGQACLLL+AG+KGKRFMM
Sbjct: 152 NSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMM 211
Query: 2351 PHSKAMIQQPRAPSSGLMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPF 2172
PH+KAMIQQPR PSSGLMPASDV IRAKEVI NRD LV+LL+KHTGNS+ETVA+VM+RP+
Sbjct: 212 PHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPY 271
Query: 2171 YMDATRAKEFGVIDKILWRGQEQIMSDVAAPEEWDKNAGIKA 2046
YMDA +AKEFGVID+ILWRGQE+I++DV EE+DKNAGIK+
Sbjct: 272 YMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKS 313
>ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana] gi|79317437|ref|NP_001031008.1|
ATP-dependent Clp protease proteolytic subunit-related
protein 3 [Arabidopsis thaliana]
gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName:
Full=ATP-dependent Clp protease proteolytic
subunit-related protein 3, chloroplastic; Short=ClpR3;
AltName: Full=nClpP8; Flags: Precursor
gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease
proteolytic subunit (ClpR3), putative [Arabidopsis
thaliana] gi|25083963|gb|AAN72143.1| ATP-dependent Clp
protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana] gi|51968388|dbj|BAD42886.1| ClpP
protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit
ClpR3 [Arabidopsis thaliana] gi|51968816|dbj|BAD43100.1|
ClpP protease complex subunit ClpR3 [Arabidopsis
thaliana] gi|51969676|dbj|BAD43530.1| ClpP protease
complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit
ClpR3 [Arabidopsis thaliana] gi|51969858|dbj|BAD43621.1|
ClpP protease complex subunit ClpR3 [Arabidopsis
thaliana] gi|51971032|dbj|BAD44208.1| ClpP protease
complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit
ClpR3 [Arabidopsis thaliana] gi|51971381|dbj|BAD44355.1|
ClpP protease complex subunit ClpR3 [Arabidopsis
thaliana] gi|51971625|dbj|BAD44477.1| ClpP protease
complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit
ClpR3 [Arabidopsis thaliana] gi|110742786|dbj|BAE99296.1|
ClpP protease complex subunit ClpR3 [Arabidopsis
thaliana] gi|332190276|gb|AEE28397.1| ATP-dependent Clp
protease proteolytic subunit-related protein 3
[Arabidopsis thaliana] gi|332190277|gb|AEE28398.1|
ATP-dependent Clp protease proteolytic subunit-related
protein 3 [Arabidopsis thaliana]
Length = 330
Score = 456 bits (1173), Expect = e-125
Identities = 222/282 (78%), Positives = 253/282 (89%)
Frame = -2
Query: 2891 SAKIPMPPINPNDPFLSKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVER 2712
SAKIPMPPINP DPFLS LAS+AA SPE L+NRP N+D PPYLDIFDSP+LM++PAQVER
Sbjct: 47 SAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVER 106
Query: 2711 SVSYNEHXXXXXXXXXXXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYI 2532
SV+YNEH L GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPI++YI
Sbjct: 107 SVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYI 166
Query: 2531 NSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMM 2352
NSTGTTRDDGETVGME+EGFAIYD++MQLKNE+HTV VGAAIGQACLLL+AG+KGKRFMM
Sbjct: 167 NSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMM 226
Query: 2351 PHSKAMIQQPRAPSSGLMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPF 2172
PH+KAMIQQPR PSSGLMPASDV IRAKEVI NRD LV+LL+KHTGNS+ETVA+VM+RP+
Sbjct: 227 PHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPY 286
Query: 2171 YMDATRAKEFGVIDKILWRGQEQIMSDVAAPEEWDKNAGIKA 2046
YMDA +AKEFGVID+ILWRGQE+I++DV EE+DKNAGIK+
Sbjct: 287 YMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKS 328
>dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 454 bits (1169), Expect = e-125
Identities = 221/282 (78%), Positives = 253/282 (89%)
Frame = -2
Query: 2891 SAKIPMPPINPNDPFLSKLASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVER 2712
SAKIPMPPINP DPFLS LAS+AA SPE L+NRP N+D PPYLDIFDSP+LM++PAQVER
Sbjct: 47 SAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVER 106
Query: 2711 SVSYNEHXXXXXXXXXXXXXLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYI 2532
SV+YNEH L GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPI++YI
Sbjct: 107 SVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYI 166
Query: 2531 NSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMM 2352
NSTGTTRDDGETVGME+EGFAIYD++MQLKNE+HTV VGAAIGQACLLL+AG+KGKRFMM
Sbjct: 167 NSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMM 226
Query: 2351 PHSKAMIQQPRAPSSGLMPASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPF 2172
PH+KAMIQ+PR PSSGLMPASDV IRAKEVI NRD LV+LL+KHTGNS+ETVA+VM+RP+
Sbjct: 227 PHAKAMIQRPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPY 286
Query: 2171 YMDATRAKEFGVIDKILWRGQEQIMSDVAAPEEWDKNAGIKA 2046
YMDA +AKEFGVID+ILWRGQE+I++DV EE+DKNAGIK+
Sbjct: 287 YMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKS 328
>ref|XP_004230236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like isoform 1 [Solanum
lycopersicum]
Length = 347
Score = 448 bits (1152), Expect = e-123
Identities = 234/315 (74%), Positives = 262/315 (83%), Gaps = 7/315 (2%)
Frame = -2
Query: 2999 MVTGLRVPMASSFLCSSPSLPV-----FNRRCLSKTVCVLNSAKIPMPPINPNDPFLSKL 2835
M T LR+PMASS CSS S FN RC + + +S+ IPMPP NP DPFLSKL
Sbjct: 1 MATCLRLPMASSIPCSSSSSMTLKHRSFNFRCAAYSN---SSSNIPMPPFNPKDPFLSKL 57
Query: 2834 ASVAATSPEILVNRPSNSDTPPYLDIFDSPKLMATPAQVERSVSYNEHXXXXXXXXXXXX 2655
ASVAA +P+ L +RP NSD PP+LDI+DSPKLMATPAQVERSVSYNEH
Sbjct: 58 ASVAANNPDALFSRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRASTPPPDLPSM 117
Query: 2654 XLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIFLYINSTGTTRDDGETVGMETEG 2475
LHGRIVYIGMPLV AVTELVIAELMYLQ+MDPK PI+LYINSTGTTRDDGETVGME EG
Sbjct: 118 LLHGRIVYIGMPLVSAVTELVIAELMYLQYMDPKAPIYLYINSTGTTRDDGETVGMEAEG 177
Query: 2474 FAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSKGKRFMMPHSKAMIQQPRAPSSGLMP 2295
FAIYD+MMQL+NEIHTVAVGAAIGQACLLLAAG+KGKRFMMPH+KAMIQQPRAPSSGLM
Sbjct: 178 FAIYDSMMQLQNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRAPSSGLMQ 237
Query: 2294 ASDVFIRAKEVIINRDTLVKLLAKHTGNSIETVADVMKRPFYMDATRAKEFGVIDKILWR 2115
ASDV+IRAKEV++NRD LVKLLAKHT NS ETV++VM+RP+YMD+ +A+EFGVIDKILWR
Sbjct: 238 ASDVYIRAKEVLVNRDNLVKLLAKHTENSEETVSNVMRRPYYMDSIKAREFGVIDKILWR 297
Query: 2114 G--QEQIMSDVAAPE 2076
G QEQI++ V APE
Sbjct: 298 GQEQEQIIASVDAPE 312