BLASTX nr result
ID: Catharanthus22_contig00006237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00006237
(964 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004234195.1| PREDICTED: pentatricopeptide repeat-containi... 406 e-111
ref|XP_006362659.1| PREDICTED: pentatricopeptide repeat-containi... 399 e-108
ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106
gb|EOY23345.1| Pentatricopeptide repeat (PPR) superfamily protei... 383 e-104
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi... 382 e-103
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,... 381 e-103
ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citr... 380 e-103
gb|EOY23346.1| Pentatricopeptide repeat (PPR) superfamily protei... 377 e-102
ref|XP_006372373.1| hypothetical protein POPTR_0017s00990g [Popu... 376 e-102
gb|EXC05953.1| hypothetical protein L484_014222 [Morus notabilis] 373 e-101
ref|XP_002327501.1| predicted protein [Populus trichocarpa] 372 e-100
gb|EMJ19937.1| hypothetical protein PRUPE_ppa009149mg [Prunus pe... 371 e-100
ref|XP_004308043.1| PREDICTED: pentatricopeptide repeat-containi... 367 3e-99
ref|XP_006836534.1| hypothetical protein AMTR_s00131p00023460 [A... 362 1e-97
ref|NP_567622.1| pentatricopeptide repeat protein EMBRYO DEFECTI... 356 6e-96
ref|XP_002867860.1| EMB1417 [Arabidopsis lyrata subsp. lyrata] g... 353 5e-95
ref|XP_006284192.1| hypothetical protein CARUB_v10005340mg [Caps... 352 9e-95
ref|XP_006413807.1| hypothetical protein EUTSA_v10025765mg [Eutr... 352 2e-94
emb|CAA17538.1| putative protein [Arabidopsis thaliana] gi|72689... 347 3e-93
ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containi... 343 4e-92
>ref|XP_004234195.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Solanum lycopersicum]
Length = 305
Score = 406 bits (1044), Expect = e-111
Identities = 202/286 (70%), Positives = 235/286 (82%), Gaps = 4/286 (1%)
Frame = +3
Query: 3 FNRNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAW 182
+NRN VVC AKGPRPRYPRVWKT+K+IGTISKS K VECIKGLSNVKEEVYGALDSFIAW
Sbjct: 25 YNRNVVVCEAKGPRPRYPRVWKTKKKIGTISKSLKLVECIKGLSNVKEEVYGALDSFIAW 84
Query: 183 ELEFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEA 362
ELEFPLITVKKALK LENEKEWKRIIQV+KWMLSKGQGRTMG+Y+ +LNALAEDGR +EA
Sbjct: 85 ELEFPLITVKKALKILENEKEWKRIIQVTKWMLSKGQGRTMGSYFALLNALAEDGRLEEA 144
Query: 363 EELWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGD 542
EELW KLFS+NLES PR+FF+KMI+IYYH+EM++KMFE+FADMEELG+RPT+P+V MVG+
Sbjct: 145 EELWLKLFSQNLESMPRIFFQKMIAIYYHKEMNEKMFEIFADMEELGIRPTVPVVKMVGN 204
Query: 543 VLQKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPD 722
V QKLGM+DKY+KLNKKYPPPKWE+RY+ GKRVKIR K L S + D E+N +
Sbjct: 205 VFQKLGMLDKYQKLNKKYPPPKWEYRYIKGKRVKIRTKDLDKSH-------DHDVESNSE 257
Query: 723 SYESVETAEISSDE--LDMVEKYEN--ESTEASSPIVYVETAESSV 848
+ E E S D+ D VE+ E+ E A +V ET ESS+
Sbjct: 258 EVDESEFDENSQDQENEDYVEQIEDAEECEPAEVSVVSSETRESSM 303
>ref|XP_006362659.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Solanum tuberosum]
Length = 308
Score = 399 bits (1024), Expect = e-108
Identities = 194/283 (68%), Positives = 230/283 (81%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 FNRNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAW 182
+NRN VVC AKGPRPRYPRVWKT+K+IGTISKS K VECIKGLSNVKEEVYGALDSFIAW
Sbjct: 25 YNRNVVVCEAKGPRPRYPRVWKTKKKIGTISKSLKLVECIKGLSNVKEEVYGALDSFIAW 84
Query: 183 ELEFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEA 362
ELEFPLITVKKALK LENEKEWKRIIQV+KWMLSKGQGRTMG+Y+ +LNALAEDGR +EA
Sbjct: 85 ELEFPLITVKKALKILENEKEWKRIIQVTKWMLSKGQGRTMGSYFALLNALAEDGRLEEA 144
Query: 363 EELWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGD 542
EELW KLFS+NLES PR+FF+KMI+IYYH+EM++KMFE+FADMEELG+RPT+P+V MVG+
Sbjct: 145 EELWLKLFSQNLESMPRIFFQKMIAIYYHKEMNEKMFEIFADMEELGIRPTVPVVTMVGN 204
Query: 543 VLQKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDA-ETNP 719
V QKL M+DKY+KL KKYPPPKWE+RY+ GKRVKIR K L S+ + + + E+
Sbjct: 205 VFQKLEMLDKYQKLKKKYPPPKWEYRYIKGKRVKIRTKDLDKSQDHDVDSKSEEVDESEF 264
Query: 720 DSYESVETAEISSDELDMVEKYENESTEASSPIVYVETAESSV 848
D + E+ D ++ ++ E E IV ET ESS+
Sbjct: 265 DENSQDQADEVDEDYVEQIKDVE-ECEPGEISIVSSETRESSM 306
>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
protein product [Vitis vinifera]
Length = 295
Score = 389 bits (999), Expect = e-106
Identities = 190/270 (70%), Positives = 224/270 (82%)
Frame = +3
Query: 9 RNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWEL 188
R+ VVC AKGPRPRYPRVWKTR+RIGTISKS K V+CIKGLSNVKEEVYGALDSFIAWEL
Sbjct: 25 RSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFIAWEL 84
Query: 189 EFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEE 368
EFPLITVKKALKTLE++KEWKRIIQV+KWMLSKGQGRTMG+Y+T+LNALAEDGR DEAEE
Sbjct: 85 EFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEE 144
Query: 369 LWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVL 548
LWTKLFSENLES PR+F++KMISIYY R+MH+KMFE+FADMEELG+RP IV MVGDV
Sbjct: 145 LWTKLFSENLESLPRVFYDKMISIYYRRDMHEKMFEIFADMEELGIRPNTSIVKMVGDVF 204
Query: 549 QKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSY 728
QKLGM+DKY KL KKYPPPKWE+RY+ GKRV+IRAK G S G ++++ ++
Sbjct: 205 QKLGMLDKYEKLQKKYPPPKWEYRYIKGKRVRIRAK----LTGESDDPGEAESDDPGEAV 260
Query: 729 ESVETAEISSDELDMVEKYENESTEASSPI 818
+ +S+E M ++ ++ +A PI
Sbjct: 261 NEINDKTENSNE--MHDEADSSVDDADEPI 288
>gb|EOY23345.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao]
Length = 258
Score = 383 bits (984), Expect = e-104
Identities = 180/241 (74%), Positives = 214/241 (88%)
Frame = +3
Query: 9 RNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWEL 188
RN VVCAAKGPRPRYPRVWK+R+RIGT+SKS K V C+K LSNVKEEVYGALDSFIAWEL
Sbjct: 19 RNTVVCAAKGPRPRYPRVWKSRRRIGTVSKSAKLVSCVKELSNVKEEVYGALDSFIAWEL 78
Query: 189 EFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEE 368
EFPLITVKKALK L+NE+EWKRIIQV KWMLSKGQGRTMGTY+T+LNALAEDGR DEAEE
Sbjct: 79 EFPLITVKKALKILQNEQEWKRIIQVVKWMLSKGQGRTMGTYFTLLNALAEDGRLDEAEE 138
Query: 369 LWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVL 548
LW KLFS+NLESTPR+FF+KMISIYYH+ MHDKMFE+FADMEELG++P++ +V+MVG+V
Sbjct: 139 LWAKLFSDNLESTPRIFFDKMISIYYHKGMHDKMFEVFADMEELGVKPSVSVVSMVGNVF 198
Query: 549 QKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSY 728
Q+LGM+DKY KLNKKYPPPKWE+RY+ GKRVKI+ K L+ + I+ G ++ + ++Y
Sbjct: 199 QQLGMLDKYDKLNKKYPPPKWEYRYIKGKRVKIKVKQLE--EFDKIAKGVTEDKETDENY 256
Query: 729 E 731
+
Sbjct: 257 D 257
>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Cucumis sativus]
Length = 331
Score = 382 bits (980), Expect = e-103
Identities = 182/251 (72%), Positives = 220/251 (87%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
++VVCAAKGPRPRYPRVWKT+KRIGTISK+ K V+C+KGLSNVKEEVYGALDSFIAWELE
Sbjct: 44 SSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELE 103
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPLITVKKALKTLEN++EWKRIIQ++KWMLSKGQGRTMG+Y+T+LNALAEDGR DEAEEL
Sbjct: 104 FPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEEL 163
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
W KLFS++LES PR+FF KMIS+YY + MHDK+FE+FADMEELG++P M IV VG+V Q
Sbjct: 164 WNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQ 223
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSYE 731
+LGM+DKY+KL KKYPPPKWE+RY+ GKRVKIRAK L + G+S + + A+ S
Sbjct: 224 ELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYL-SENGNSNNGLSEHAKMEHSSTN 282
Query: 732 SVETAEISSDE 764
S++ AEI+S++
Sbjct: 283 SIDEAEITSED 293
>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 359
Score = 381 bits (979), Expect = e-103
Identities = 190/274 (69%), Positives = 223/274 (81%), Gaps = 7/274 (2%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
++VV A KG RPR PRVWKT+ RIGTISKS K VECIKGLSNVKEEVYGALDS IAWELE
Sbjct: 59 SSVVSALKGARPRAPRVWKTKPRIGTISKSAKLVECIKGLSNVKEEVYGALDSLIAWELE 118
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPLI VKKALKTLENE+EWKRIIQV KWMLSKGQGRTMGTY+T+LNALAED R DEAEEL
Sbjct: 119 FPLIAVKKALKTLENEQEWKRIIQVIKWMLSKGQGRTMGTYFTLLNALAEDERLDEAEEL 178
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
WTKLFS+NLE TPR FF+KMISIYY REMH+KMFE+FADMEELG+RP++ IVNM+G V Q
Sbjct: 179 WTKLFSDNLEGTPRNFFDKMISIYYKREMHEKMFEIFADMEELGVRPSVSIVNMMGSVFQ 238
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAET------ 713
KLGM+DKYRKL KKYPPPKWE+RY+ GKRV++RAK + G++ SV N +AET
Sbjct: 239 KLGMLDKYRKLKKKYPPPKWEYRYIKGKRVRLRAKQVNEFLGANESV-NQNAETPYISNK 297
Query: 714 -NPDSYESVETAEISSDELDMVEKYENESTEASS 812
N + + A + D ++ E+ +S+EA++
Sbjct: 298 LNEEDNTKLNEANVEEDLNELDEESSTKSSEANA 331
>ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citrus clementina]
gi|568875045|ref|XP_006490621.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21190-like [Citrus sinensis]
gi|557523924|gb|ESR35291.1| hypothetical protein
CICLE_v10005483mg [Citrus clementina]
Length = 310
Score = 380 bits (975), Expect = e-103
Identities = 185/265 (69%), Positives = 220/265 (83%)
Frame = +3
Query: 9 RNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWEL 188
R+ VVCAA+GPRPRYPRVWK RKRIGTISKS K V CIKGLSNVKEEVYGALDSFIAWEL
Sbjct: 25 RSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWEL 84
Query: 189 EFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEE 368
EFPLITVKKALKTLENEK+WKRIIQV+KWMLSKGQGRTMGTY+ +LNALAEDGR DEAEE
Sbjct: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
Query: 369 LWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVL 548
LWTK+F ++LE TPR+FF+KMISIYY+R MH+KMFE+FADMEELG+RP + IV+M+G+
Sbjct: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
Query: 549 QKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSY 728
QKLGM+DKY KL KKYPPPKWE+RY+ GKRV+I AK + S+ ++ ET +
Sbjct: 205 QKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKP-KYELDSATEGKTNEVETTKNPN 263
Query: 729 ESVETAEISSDELDMVEKYENESTE 803
ES E E +++ + +E+ E + E
Sbjct: 264 ESSEEPEAAANLNESLEETEANTKE 288
>gb|EOY23346.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 238
Score = 377 bits (969), Expect = e-102
Identities = 177/237 (74%), Positives = 211/237 (89%)
Frame = +3
Query: 21 VCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELEFPL 200
VCAAKGPRPRYPRVWK+R+RIGT+SKS K V C+K LSNVKEEVYGALDSFIAWELEFPL
Sbjct: 3 VCAAKGPRPRYPRVWKSRRRIGTVSKSAKLVSCVKELSNVKEEVYGALDSFIAWELEFPL 62
Query: 201 ITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEELWTK 380
ITVKKALK L+NE+EWKRIIQV KWMLSKGQGRTMGTY+T+LNALAEDGR DEAEELW K
Sbjct: 63 ITVKKALKILQNEQEWKRIIQVVKWMLSKGQGRTMGTYFTLLNALAEDGRLDEAEELWAK 122
Query: 381 LFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQKLG 560
LFS+NLESTPR+FF+KMISIYYH+ MHDKMFE+FADMEELG++P++ +V+MVG+V Q+LG
Sbjct: 123 LFSDNLESTPRIFFDKMISIYYHKGMHDKMFEVFADMEELGVKPSVSVVSMVGNVFQQLG 182
Query: 561 MVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSYE 731
M+DKY KLNKKYPPPKWE+RY+ GKRVKI+ K L+ + I+ G ++ + ++Y+
Sbjct: 183 MLDKYDKLNKKYPPPKWEYRYIKGKRVKIKVKQLE--EFDKIAKGVTEDKETDENYD 237
>ref|XP_006372373.1| hypothetical protein POPTR_0017s00990g [Populus trichocarpa]
gi|550318992|gb|ERP50170.1| hypothetical protein
POPTR_0017s00990g [Populus trichocarpa]
Length = 336
Score = 376 bits (965), Expect = e-102
Identities = 182/263 (69%), Positives = 214/263 (81%)
Frame = +3
Query: 18 VVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELEFP 197
VVCAAKGPRPRYPRVWKT++RIGTISKS K V+CIKGLSNVKEEVYGALDSF+AWELEFP
Sbjct: 29 VVCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFP 88
Query: 198 LITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEELWT 377
LI VKKAL+ LE ++EWKRIIQV+KWMLSKGQGRTMGTY+T++NALAEDGR DE EELWT
Sbjct: 89 LIAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWT 148
Query: 378 KLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQKL 557
KLFS+ LE TPRM F+KMISIYY R+MHD++FE+FADMEELG+RP++ IVNMVG+V Q+L
Sbjct: 149 KLFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRL 208
Query: 558 GMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSYESV 737
GM+DKY KL KKYPPPKW +RY+ GKRV++RAK+ N G SV + D E + D
Sbjct: 209 GMMDKYEKLKKKYPPPKWIYRYIKGKRVRVRAKN-DNEAGDVNSVASGDEEASHD----- 262
Query: 738 ETAEISSDELDMVEKYENESTEA 806
DELD + + EA
Sbjct: 263 -------DELDGINDVASGDEEA 278
>gb|EXC05953.1| hypothetical protein L484_014222 [Morus notabilis]
Length = 305
Score = 373 bits (958), Expect = e-101
Identities = 186/278 (66%), Positives = 219/278 (78%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
+ VVCAAKGPRPRY RVWKT KRIGT+SKS KFV+ IK LSNVKEEVYGALDS IAWELE
Sbjct: 27 SVVVCAAKGPRPRYARVWKTNKRIGTVSKSAKFVQSIKELSNVKEEVYGALDSLIAWELE 86
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPLITVKKA+KTLE +KEWKRIIQV+KWMLSKGQG+TMGTY+ +LNALAEDGR +EAEEL
Sbjct: 87 FPLITVKKAIKTLEEQKEWKRIIQVTKWMLSKGQGKTMGTYFILLNALAEDGRLEEAEEL 146
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
WTKLFSENLESTPR FF KMISIYYHR MHD+MFE+FADMEELG+RP + IV MVG V
Sbjct: 147 WTKLFSENLESTPRNFFNKMISIYYHRRMHDQMFEIFADMEELGIRPNVSIVTMVGKVFL 206
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSYE 731
+LGM+DK++KL +KYP PKWE+RY+ GKR++IRAK L G + + D E+ S E
Sbjct: 207 ELGMLDKHKKLKRKYPLPKWEYRYIRGKRIRIRAKDLAKYDGDTDRGVSKDEESEHGSDE 266
Query: 732 SVETAEISSDELDMVEKYENESTEASSPIVYVETAESS 845
++ AE S + D E+E + S V+ E S+
Sbjct: 267 PLDIAESSPNGSDA----ESEEVDPESNDVFEEAEMST 300
>ref|XP_002327501.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 372 bits (954), Expect = e-100
Identities = 174/230 (75%), Positives = 203/230 (88%)
Frame = +3
Query: 21 VCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELEFPL 200
VCAAKGPRPRYPRVWKT++RIGTISKS K V+CIKGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 1 VCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPL 60
Query: 201 ITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEELWTK 380
I VKKAL+ LE ++EWKRIIQV+KWMLSKGQGRTMGTY+T++NALAEDGR DE EELWTK
Sbjct: 61 IAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTK 120
Query: 381 LFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQKLG 560
LFS+ LE TPRM F+KMISIYY R+MHD++FE+FADMEELG+RP++ IVNMVG+V Q+LG
Sbjct: 121 LFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLG 180
Query: 561 MVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAE 710
M+DKY KL KKYPPPKW +RY+ GKRV++RAK+ N G SV + D E
Sbjct: 181 MMDKYEKLKKKYPPPKWIYRYIKGKRVRVRAKN-DNEAGDVNSVASGDEE 229
>gb|EMJ19937.1| hypothetical protein PRUPE_ppa009149mg [Prunus persica]
Length = 305
Score = 371 bits (952), Expect = e-100
Identities = 189/274 (68%), Positives = 221/274 (80%), Gaps = 10/274 (3%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
+ V+CAAKGPRPRYPRVWK KRIGTISKS K VE IKGLSNVKEEVYGALDSFIAWELE
Sbjct: 26 SVVLCAAKGPRPRYPRVWKANKRIGTISKSIKLVESIKGLSNVKEEVYGALDSFIAWELE 85
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPLITVKKALKTLEN+KEWKRIIQVSKWMLSKGQGRTMGTY+T+LNALAEDGR +EAEEL
Sbjct: 86 FPLITVKKALKTLENQKEWKRIIQVSKWMLSKGQGRTMGTYFTLLNALAEDGRVEEAEEL 145
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
WTKLFS+ LES PRMFF+KMISIYY +HDKMFE+FADMEELG++P + IV VG+V Q
Sbjct: 146 WTKLFSQYLESMPRMFFDKMISIYYRHGIHDKMFEIFADMEELGVQPNVSIVTKVGNVFQ 205
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSI------SVGNSD--- 704
+LGM+DKY KL +KYPPPKWE+RY+ GKRVKIRA + +N + +V +S+
Sbjct: 206 ELGMLDKYHKLKQKYPPPKWEYRYIKGKRVKIRA-NYENDGAEKMPSQEKETVHSSEELL 264
Query: 705 -AETNPDSYESVETAEISSDELDMVEKYENESTE 803
AE+NP+ E V E + D++E+ E+ E
Sbjct: 265 AAESNPN--EDVVAEEGDQNSSDLLEEAESSLDE 296
>ref|XP_004308043.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Fragaria vesca subsp. vesca]
Length = 313
Score = 367 bits (943), Expect = 3e-99
Identities = 181/274 (66%), Positives = 215/274 (78%), Gaps = 13/274 (4%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
+ VVC KGPRPRYPRVWK+ K+IGTISKS K VECIKGLSNVKEEVYGALDSFIAWELE
Sbjct: 26 SVVVCGLKGPRPRYPRVWKSNKKIGTISKSLKLVECIKGLSNVKEEVYGALDSFIAWELE 85
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPLITVKKALKTLEN+K++KRIIQV+KWMLSKGQGRTMGTY+T+LNALA DGR +EAEEL
Sbjct: 86 FPLITVKKALKTLENQKDYKRIIQVAKWMLSKGQGRTMGTYFTLLNALAADGRLEEAEEL 145
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
WTKLF++ L+S PR+FF+KMISIYY + +HDKMFE+FADMEELG++P M IVN VGDV Q
Sbjct: 146 WTKLFTQYLDSMPRIFFDKMISIYYEKGLHDKMFEIFADMEELGIKPNMSIVNKVGDVFQ 205
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKG-------------SSISV 692
KLGM+DKY KL KKYPPP+WE RY+ GKRV+I+A N G S V
Sbjct: 206 KLGMMDKYTKLKKKYPPPRWEIRYIKGKRVRIQANKQGNLDGDVKMLSEEKETIHGSNEV 265
Query: 693 GNSDAETNPDSYESVETAEISSDELDMVEKYENE 794
N+D+ + + E+ E +I + LD + +E
Sbjct: 266 LNADSNPDEQTVEAEEMNQILCNSLDEADTSSDE 299
>ref|XP_006836534.1| hypothetical protein AMTR_s00131p00023460 [Amborella trichopoda]
gi|548839073|gb|ERM99387.1| hypothetical protein
AMTR_s00131p00023460 [Amborella trichopoda]
Length = 317
Score = 362 bits (929), Expect = 1e-97
Identities = 183/283 (64%), Positives = 214/283 (75%), Gaps = 9/283 (3%)
Frame = +3
Query: 21 VCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELEFPL 200
+C AKGPRPRYPRVWKTRKRIG+ISKS+K VECIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 20 ICVAKGPRPRYPRVWKTRKRIGSISKSEKLVECIKGLSNVKEEVYGALDSFIAWELEFPL 79
Query: 201 ITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEELWTK 380
I VKKALK L+NEKEWKRIIQV+KWMLSKGQG+TMG+YYT+LNAL EDGR +EAEELWTK
Sbjct: 80 IVVKKALKILQNEKEWKRIIQVTKWMLSKGQGKTMGSYYTLLNALIEDGRLEEAEELWTK 139
Query: 381 LFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQKLG 560
+FSENLE PR+FF +IS+YY MHDKMFE+FADMEELG++P IV MVGD QKLG
Sbjct: 140 IFSENLEGLPRIFFHLIISVYYKNNMHDKMFEVFADMEELGVKPNNAIVVMVGDEFQKLG 199
Query: 561 MVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSYESVE 740
M+DKY+KL KKYPP KWE+RY+ GKRVKI +K+L + + + E+
Sbjct: 200 MLDKYKKLKKKYPPLKWEYRYIKGKRVKILSKNLSQFGEDGVRPQKDEPRRMREECENAT 259
Query: 741 TA------EISSDELDMV-EKYENEST--EASSPIVYVETAES 842
E SSDE ++ EK E T E + +YV E+
Sbjct: 260 LCVSDNENEASSDEDGVIPEKDELRRTREECENAALYVSENEN 302
>ref|NP_567622.1| pentatricopeptide repeat protein EMBRYO DEFECTIVE 1417 [Arabidopsis
thaliana] gi|75246109|sp|Q8LG95.1|PP332_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g21190; AltName: Full=Protein EMBRYO DEFECTIVE 1417
gi|21618230|gb|AAM67280.1| unknown [Arabidopsis
thaliana] gi|51969238|dbj|BAD43311.1| putative protein
[Arabidopsis thaliana] gi|51971351|dbj|BAD44340.1|
putative protein [Arabidopsis thaliana]
gi|51971365|dbj|BAD44347.1| putative protein
[Arabidopsis thaliana] gi|332659017|gb|AEE84417.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 307
Score = 356 bits (914), Expect = 6e-96
Identities = 174/262 (66%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
N VVCAA+GPRPR PRVWKTRKRIGTISK+ K + CIKGLSNVKEEVYGALDSFIAWELE
Sbjct: 29 NVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELE 88
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPL+ VKKAL LE+EKEWK+IIQV+KWMLSKGQGRTMGTY+++LNALAED R DEAEEL
Sbjct: 89 FPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEEL 148
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
W KLF E+LE TPR FF KMISIYY R+MH K+FE+FADMEELG++P + IV+MVG V
Sbjct: 149 WNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFV 208
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSYE 731
KL M DKY KL KKYPPP+WE RY+ G+RVK++AK L + +S G ++ D +
Sbjct: 209 KLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVKAKQL-----NELSEGEGGLSSDEDKID 263
Query: 732 S-VETAEISSDELDMVEKYENE 794
+ +E+ E ++L E+ E E
Sbjct: 264 NEIESEEEDGEDLSEEEEDEKE 285
>ref|XP_002867860.1| EMB1417 [Arabidopsis lyrata subsp. lyrata]
gi|297313696|gb|EFH44119.1| EMB1417 [Arabidopsis lyrata
subsp. lyrata]
Length = 317
Score = 353 bits (906), Expect = 5e-95
Identities = 176/264 (66%), Positives = 207/264 (78%), Gaps = 3/264 (1%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
N VVCAA+GPRPR PRVWKTRKRIGTISK+ K + CIKGLSNVKEEVYGALDSFIAWELE
Sbjct: 29 NVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELE 88
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPL+ VKKAL LE+EKEWK+IIQV+KWMLSKGQGRTMGTY+++LNALAED R DEAEEL
Sbjct: 89 FPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEEL 148
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
W KLF E+LE TPR FF KMISIYY R+MH K+FE+FADMEELG++P + IV+MVG V
Sbjct: 149 WNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNIAIVSMVGKVFV 208
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQN-SKG-SSISVGNSDAETNPDS 725
KL M DKY KL KKYPPP+WE RY+ G+RVK++AK L S+G +S +T +S
Sbjct: 209 KLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIDTEIES 268
Query: 726 YESV-ETAEISSDELDMVEKYENE 794
+ E D D+ E+ E+E
Sbjct: 269 KSKILSDKEPKQDGEDLSEEEEDE 292
>ref|XP_006284192.1| hypothetical protein CARUB_v10005340mg [Capsella rubella]
gi|482552897|gb|EOA17090.1| hypothetical protein
CARUB_v10005340mg [Capsella rubella]
Length = 304
Score = 352 bits (904), Expect = 9e-95
Identities = 175/267 (65%), Positives = 207/267 (77%), Gaps = 3/267 (1%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
N VVCAA+GPRPR PRVWKTRKRIG+ISK+ K + CIKGLSNVKEEVYGALDSFIAWELE
Sbjct: 27 NVVVCAARGPRPRSPRVWKTRKRIGSISKAAKMIACIKGLSNVKEEVYGALDSFIAWELE 86
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPL+ VKKAL LE+EKEWK+IIQV+KWMLSKGQGRTMGTY+++LNALAED R DEAEEL
Sbjct: 87 FPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEEL 146
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
W KLF E+LE TPR FF KMISIYY R+MH K+FE+FADMEELG++P + IV+MVG V
Sbjct: 147 WNKLFMEHLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPNLAIVSMVGKVFV 206
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQN-SKGSSISVGNSDAETNPDSY 728
KL M DKY KL KKYPPP+WE RY+ G+RVK++AK L S+G + D N
Sbjct: 207 KLEMQDKYEKLMKKYPPPQWEFRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKVGNEIES 266
Query: 729 ES--VETAEISSDELDMVEKYENESTE 803
+S + E + D D+ E+ E E +
Sbjct: 267 KSNMLSDKEANQDGEDLSEEEEEEEED 293
>ref|XP_006413807.1| hypothetical protein EUTSA_v10025765mg [Eutrema salsugineum]
gi|567220358|ref|XP_006413808.1| hypothetical protein
EUTSA_v10025765mg [Eutrema salsugineum]
gi|557114977|gb|ESQ55260.1| hypothetical protein
EUTSA_v10025765mg [Eutrema salsugineum]
gi|557114978|gb|ESQ55261.1| hypothetical protein
EUTSA_v10025765mg [Eutrema salsugineum]
Length = 315
Score = 352 bits (902), Expect = 2e-94
Identities = 172/266 (64%), Positives = 207/266 (77%), Gaps = 4/266 (1%)
Frame = +3
Query: 12 NAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWELE 191
N VVCAA+GPRPR+PRVWKT+KRIG+ISK+ K + CIK LSNVKEEVYGALDSFIAWELE
Sbjct: 27 NVVVCAARGPRPRHPRVWKTKKRIGSISKAAKMLSCIKELSNVKEEVYGALDSFIAWELE 86
Query: 192 FPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEEL 371
FPL+ VKKAL LE+E+EWK+IIQV+KWMLSKGQGRTMGTY+++LNALAED R DEAEEL
Sbjct: 87 FPLVIVKKALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEEL 146
Query: 372 WTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVLQ 551
W KLF E+LE TPR FF KMISIYY R+MH K+FE+FADMEELG++P + IV+MVG V
Sbjct: 147 WNKLFMEHLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVSMVGKVFM 206
Query: 552 KLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSL----QNSKGSSISVGNSDAETNP 719
KL M DKY KL KKYPPP+WE RY+ G+R+K++AK L + G S +D+E
Sbjct: 207 KLEMKDKYEKLMKKYPPPQWEFRYIKGRRIKVKAKQLSELSEGEGGVSSDEDKTDSEIES 266
Query: 720 DSYESVETAEISSDELDMVEKYENES 797
S E E + D D+ E E+E+
Sbjct: 267 KS-EMFSDEEANQDAEDLSENEEDEN 291
>emb|CAA17538.1| putative protein [Arabidopsis thaliana] gi|7268916|emb|CAB79119.1|
putative protein [Arabidopsis thaliana]
Length = 325
Score = 347 bits (891), Expect = 3e-93
Identities = 173/269 (64%), Positives = 208/269 (77%), Gaps = 7/269 (2%)
Frame = +3
Query: 9 RNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVEC------IKGLSNVKEEVYGALDS 170
+ A VCAA+GPRPR PRVWKTRKRIGTISK+ K + C IKGLSNVKEEVYGALDS
Sbjct: 40 KKAQVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACVMLSSYIKGLSNVKEEVYGALDS 99
Query: 171 FIAWELEFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGR 350
FIAWELEFPL+ VKKAL LE+EKEWK+IIQV+KWMLSKGQGRTMGTY+++LNALAED R
Sbjct: 100 FIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNR 159
Query: 351 FDEAEELWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVN 530
DEAEELW KLF E+LE TPR FF KMISIYY R+MH K+FE+FADMEELG++P + IV+
Sbjct: 160 LDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVS 219
Query: 531 MVGDVLQKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAE 710
MVG V KL M DKY KL KKYPPP+WE RY+ G+RVK++AK L + +S G
Sbjct: 220 MVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVKAKQL-----NELSEGEGGLS 274
Query: 711 TNPDSYES-VETAEISSDELDMVEKYENE 794
++ D ++ +E+ E ++L E+ E E
Sbjct: 275 SDEDKIDNEIESEEEDGEDLSEEEEDEKE 303
>ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like isoform X1 [Glycine max]
gi|571529307|ref|XP_006599545.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21190-like isoform X2 [Glycine max]
Length = 343
Score = 343 bits (881), Expect = 4e-92
Identities = 161/254 (63%), Positives = 210/254 (82%)
Frame = +3
Query: 9 RNAVVCAAKGPRPRYPRVWKTRKRIGTISKSQKFVECIKGLSNVKEEVYGALDSFIAWEL 188
R V+CAAKG RPRYPRVWKT K+IGTISK+ K V IK LSNVKEEVYGALDS++AWEL
Sbjct: 25 RGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKLVNSIKELSNVKEEVYGALDSYVAWEL 84
Query: 189 EFPLITVKKALKTLENEKEWKRIIQVSKWMLSKGQGRTMGTYYTMLNALAEDGRFDEAEE 368
EFPLITVKKALKTLE+E+EWKR+IQV+KWMLSKGQG+TMG+Y+T+LNAL ED R DEAEE
Sbjct: 85 EFPLITVKKALKTLESEQEWKRVIQVTKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEE 144
Query: 369 LWTKLFSENLESTPRMFFEKMISIYYHREMHDKMFELFADMEELGMRPTMPIVNMVGDVL 548
LWTKL + +ES PR FF+KMISIY+ R MH+KMFE+FADMEEL +RP + +V+M+GD
Sbjct: 145 LWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFADMEELCLRPNIAVVSMIGDAF 204
Query: 549 QKLGMVDKYRKLNKKYPPPKWEHRYVNGKRVKIRAKSLQNSKGSSISVGNSDAETNPDSY 728
++LGM+DKY+KL+ KYPPP+WE+RY+ GKRVK++ + +Q+++ ++ + + E N D
Sbjct: 205 KELGMLDKYQKLHAKYPPPQWEYRYIRGKRVKVKVE-VQSNQVNTYIERHGNVEPNSDLN 263
Query: 729 ESVETAEISSDELD 770
++ +E +S+ +D
Sbjct: 264 KNYRLSEKTSEIVD 277