BLASTX nr result
ID: Catharanthus22_contig00006227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00006227
(244 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343948.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 114 1e-23
ref|XP_004245579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 114 1e-23
ref|XP_006352270.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 100 3e-19
ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu... 99 6e-19
gb|EXB37315.1| RING-H2 zinc finger protein RHA1a [Morus notabilis] 98 1e-18
ref|XP_003532420.1| PREDICTED: RING-H2 zinc finger protein RHA1a... 98 1e-18
ref|XP_004244617.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 97 2e-18
ref|XP_004298823.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 97 3e-18
ref|XP_003525383.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 96 5e-18
ref|XP_006439498.1| hypothetical protein CICLE_v10024600mg [Citr... 94 1e-17
ref|XP_004503686.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 94 1e-17
gb|ESW32088.1| hypothetical protein PHAVU_002G291800g [Phaseolus... 93 4e-17
gb|EMJ10904.1| hypothetical protein PRUPE_ppa012459mg [Prunus pe... 92 7e-17
gb|AFK38566.1| unknown [Medicago truncatula] 92 9e-17
gb|ACJ86080.1| unknown [Medicago truncatula] 92 9e-17
gb|EOY24809.1| RING-H2 zinc finger protein RHA1a, putative [Theo... 90 4e-16
gb|AFK46654.1| unknown [Lotus japonicus] 90 4e-16
gb|EPS71290.1| hypothetical protein M569_03468, partial [Genlise... 89 8e-16
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 88 1e-15
ref|XP_002304513.2| hypothetical protein POPTR_0003s13080g [Popu... 86 4e-15
>ref|XP_006343948.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum
tuberosum]
Length = 165
Score = 114 bits (286), Expect = 1e-23
Identities = 61/80 (76%), Positives = 66/80 (82%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
K I I GLG+FLEPEMS +P R ES SEL SVSAALIRELLPVVKFS+L+DPPES
Sbjct: 28 KFICAIFTVFGLGDFLEPEMS-FPTR-PESHSELHSVSAALIRELLPVVKFSELVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCLYEFD +DEIRRLTNC
Sbjct: 86 CAVCLYEFDGEDEIRRLTNC 105
>ref|XP_004245579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum
lycopersicum]
Length = 165
Score = 114 bits (286), Expect = 1e-23
Identities = 61/80 (76%), Positives = 66/80 (82%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
K I I GLG+FLEPEMS +P R ES SEL SVSAALIRELLPVVKFS+L+DPPES
Sbjct: 28 KFICTIFTVFGLGDFLEPEMS-FPTR-PESHSELHSVSAALIRELLPVVKFSELVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCLYEFD +DEIRRLTNC
Sbjct: 86 CAVCLYEFDGEDEIRRLTNC 105
>ref|XP_006352270.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum
tuberosum]
Length = 158
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI + +GL +FLEP+ YP R E + L SVSAA+IRE+LPVVKFS+++DPPE+
Sbjct: 28 KLICNLFTILGLPDFLEPDFP-YPTRPVEENTRLCSVSAAIIREILPVVKFSEIVDPPEN 86
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCLYEFD DEIR L NC
Sbjct: 87 CAVCLYEFDSGDEIRMLMNC 106
>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
gi|223549737|gb|EEF51225.1| zinc finger protein,
putative [Ricinus communis]
Length = 164
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMS--NYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPP 176
KLI + +++GL +FLEP++S P R+ E S SA LIRE+LPVVKFSDL+DPP
Sbjct: 28 KLINTLFRYLGLPDFLEPDISWPETPSRVPE----FYSASAVLIREILPVVKFSDLVDPP 83
Query: 177 ESCAVCLYEFDEDDEIRRLTNC 242
+SCAVCLYEF++ DEIRRLTNC
Sbjct: 84 DSCAVCLYEFEDHDEIRRLTNC 105
>gb|EXB37315.1| RING-H2 zinc finger protein RHA1a [Morus notabilis]
Length = 170
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/84 (59%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGS----ELRSVSAALIRELLPVVKFSDLID 170
K I I F+GL +FL+PE S + E SVS+ LIRELLPVVKFS+L+D
Sbjct: 28 KFISIIFSFLGLQDFLDPESSTSWSSTDSPATTRIPEFHSVSSVLIRELLPVVKFSELVD 87
Query: 171 PPESCAVCLYEFDEDDEIRRLTNC 242
PPESCAVCLYEF+ +DEIRRLTNC
Sbjct: 88 PPESCAVCLYEFESEDEIRRLTNC 111
>ref|XP_003532420.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like [Glycine max]
Length = 160
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/81 (60%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYP-IRISESGSELRSVSAALIRELLPVVKFSDLIDPPE 179
KLI +L+F+GL +FLEP+++ +P R+ E E SVSA LIRE+LPVVKF +L+DPPE
Sbjct: 28 KLICSLLRFMGLHDFLEPDIAAWPETRMPE---EFESVSATLIREILPVVKFRELVDPPE 84
Query: 180 SCAVCLYEFDEDDEIRRLTNC 242
+CAVCL EF+E+DEIR+L NC
Sbjct: 85 TCAVCLSEFEENDEIRQLANC 105
>ref|XP_004244617.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum
lycopersicum]
Length = 158
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI + +GL +FLEP+ YP R E + L SVSAA+IRE+LPVVKFS++++PPE
Sbjct: 28 KLICNLFTILGLPDFLEPDFP-YPTRPGEENTRLCSVSAAIIREILPVVKFSEIVEPPEK 86
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
C VCLYEFD DEIR L NC
Sbjct: 87 CVVCLYEFDSGDEIRMLMNC 106
>ref|XP_004298823.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Fragaria vesca
subsp. vesca]
Length = 168
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI + +GL +F+EP+ + E +SVSA LIRELLPVVKFSDL+DPPES
Sbjct: 28 KLITTLFSVLGLQDFIEPDNAWSDPPHQTRIPEFQSVSALLIRELLPVVKFSDLVDPPES 87
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCLYEF+ DD++RRLTNC
Sbjct: 88 CAVCLYEFEADDDVRRLTNC 107
>ref|XP_003525383.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Glycine max]
Length = 156
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/82 (59%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMS--NYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPP 176
KLI +L+F+GL +FLEP+++ R+ E E SVSA LIRE+LPVVKF +L+DPP
Sbjct: 28 KLICSLLRFMGLHDFLEPDIAWAETQTRVPE---EFESVSATLIREILPVVKFRELVDPP 84
Query: 177 ESCAVCLYEFDEDDEIRRLTNC 242
E+CAVCL EF+E+DEIRRL NC
Sbjct: 85 ETCAVCLSEFEENDEIRRLANC 106
>ref|XP_006439498.1| hypothetical protein CICLE_v10024600mg [Citrus clementina]
gi|568845310|ref|XP_006476519.1| PREDICTED: E3
ubiquitin-protein ligase RHA1B-like [Citrus sinensis]
gi|557541760|gb|ESR52738.1| hypothetical protein
CICLE_v10024600mg [Citrus clementina]
Length = 171
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/80 (58%), Positives = 59/80 (73%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI + +GL +FLEP++ + + SVSA LIRE+LPVVKFS+L+DPP+S
Sbjct: 28 KLITILFTCLGLQDFLEPDIDAPDSARAAAPLRPLSVSALLIREILPVVKFSELVDPPDS 87
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCLYEF+E DEIRRLTNC
Sbjct: 88 CAVCLYEFEEQDEIRRLTNC 107
>ref|XP_004503686.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Cicer arietinum]
Length = 161
Score = 94.4 bits (233), Expect = 1e-17
Identities = 50/80 (62%), Positives = 62/80 (77%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI I +F+GL +FLEP+++ +P S E SVSA LIRE+LPVVKF +L+DPPES
Sbjct: 28 KLICAIFRFLGLHDFLEPDIT-WPDG-STRIPEFESVSALLIREILPVVKFMELVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCL EF+E+DEIRRL NC
Sbjct: 86 CAVCLTEFEENDEIRRLANC 105
>gb|ESW32088.1| hypothetical protein PHAVU_002G291800g [Phaseolus vulgaris]
Length = 160
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/80 (58%), Positives = 63/80 (78%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
+LI +L+F+GL +FLEP+++ +P + E SVSA LIRE+LPVVKF DL+DPPE+
Sbjct: 28 RLISTLLRFMGLHDFLEPDIA-WPEAHTRM-PEFESVSATLIREILPVVKFRDLLDPPET 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCL EF+++DEIRRL NC
Sbjct: 86 CAVCLTEFEKNDEIRRLANC 105
>gb|EMJ10904.1| hypothetical protein PRUPE_ppa012459mg [Prunus persica]
Length = 168
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI +GL +F++P+ N E S SA LIRE+LPVVKFSDL+DPPES
Sbjct: 28 KLISTFFSLLGLQDFIQPD--NAWADPPAPFPEFHSASAVLIREILPVVKFSDLVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCLYEF+ +DEIRRLTNC
Sbjct: 86 CAVCLYEFESEDEIRRLTNC 105
>gb|AFK38566.1| unknown [Medicago truncatula]
Length = 163
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/80 (60%), Positives = 61/80 (76%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI I +++GL +F+EP++ +P S E SVSA LIRE+LPVVKF +L+DPPES
Sbjct: 28 KLINTIFRYMGLPDFIEPDII-WPEN-STRIPEFESVSALLIREILPVVKFMELVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCL EF+E+DEIRRL NC
Sbjct: 86 CAVCLTEFEENDEIRRLANC 105
>gb|ACJ86080.1| unknown [Medicago truncatula]
Length = 163
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/80 (60%), Positives = 61/80 (76%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KLI I +++GL +F+EP++ +P S E SVSA LIRE+LPVVKF +L+DPPES
Sbjct: 28 KLINTIFRYMGLPDFIEPDII-WPEN-STRIPEFESVSALLIREILPVVKFMELVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
CAVCL EF+E+DEIRRL NC
Sbjct: 86 CAVCLTEFEENDEIRRLANC 105
>gb|EOY24809.1| RING-H2 zinc finger protein RHA1a, putative [Theobroma cacao]
Length = 233
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 9/89 (10%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRS---------VSAALIRELLPVVKF 155
K I + ++GL +FLEP++ + ++ S S VSA LIRELLPVVKF
Sbjct: 86 KFISTLFLYLGLPDFLEPDIIPWRDTVNTDVSNSASSSPTPRRIPVSALLIRELLPVVKF 145
Query: 156 SDLIDPPESCAVCLYEFDEDDEIRRLTNC 242
SDL+DPP+SCAVCLY+F+ DEIRRLTNC
Sbjct: 146 SDLVDPPDSCAVCLYDFEGQDEIRRLTNC 174
>gb|AFK46654.1| unknown [Lotus japonicus]
Length = 167
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFSDLIDPPES 182
KL+ + +++GL +FLEP++ +P S E SVSA LIRE+LPVVKF +L+DPPES
Sbjct: 28 KLVCTLFRYLGLPDFLEPDIV-WPDN-STRIPEFESVSALLIREILPVVKFRELVDPPES 85
Query: 183 CAVCLYEFDEDDEIRRLTNC 242
C VCL EF+E DEIRRL NC
Sbjct: 86 CVVCLSEFEESDEIRRLANC 105
>gb|EPS71290.1| hypothetical protein M569_03468, partial [Genlisea aurea]
Length = 167
Score = 88.6 bits (218), Expect = 8e-16
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGSELRSVSAALIRELLPVVKFS----DLID 170
K + + +GLGEFLEP+ ++Y I + +L SV+A+LIRE+LPVVKFS DL D
Sbjct: 28 KFAYALFSLMGLGEFLEPDTTSY-IPPWDDSPQL-SVAASLIREILPVVKFSELEEDLND 85
Query: 171 PPESCAVCLYEFDEDDEIRRLTNC 242
PPE CAVCLYEF DDEIRRL NC
Sbjct: 86 PPERCAVCLYEFGGDDEIRRLRNC 109
>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
Length = 168
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 9/89 (10%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNYPIRISESGS----ELRSVSAALIRELLPVVKFSDLI- 167
KLI Y +F+GL +FLEP++ + GS E +SVSA LIRE+LPV+KF +L+
Sbjct: 28 KLISYFFRFLGLTDFLEPDI------VWTEGSTQVPEFQSVSAVLIREILPVMKFEELVG 81
Query: 168 ----DPPESCAVCLYEFDEDDEIRRLTNC 242
DPP+ CAVCLYEF+ +EIRRLTNC
Sbjct: 82 AGAGDPPDQCAVCLYEFEGQEEIRRLTNC 110
>ref|XP_002304513.2| hypothetical protein POPTR_0003s13080g [Populus trichocarpa]
gi|550343069|gb|EEE79492.2| hypothetical protein
POPTR_0003s13080g [Populus trichocarpa]
Length = 183
Score = 86.3 bits (212), Expect = 4e-15
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 8/88 (9%)
Frame = +3
Query: 3 KLIFYILKFVGLGEFLEPEMSNY-------PIRISESGSELRSVSAALIRELLPVVKFSD 161
KLI + +GL +FLEP +S+ P R+ + S SVSA LIRE+LPVVKFS+
Sbjct: 28 KLINTLFHCIGLPDFLEPGISSSSSTENTPPFRVPDFHSH--SVSALLIREILPVVKFSE 85
Query: 162 LIDPP-ESCAVCLYEFDEDDEIRRLTNC 242
L+DP +SCAVCLYEF+E DEIRRL NC
Sbjct: 86 LVDPSADSCAVCLYEFEESDEIRRLANC 113