BLASTX nr result
ID: Catharanthus22_contig00006065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00006065
(777 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 180 2e-65
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 169 1e-62
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera] 150 1e-58
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida] 169 1e-58
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 161 3e-58
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 176 3e-56
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 160 5e-56
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja... 148 1e-51
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 148 1e-51
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap... 148 1e-51
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 158 3e-50
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 164 4e-50
emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera] 122 8e-50
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe... 148 9e-49
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe... 150 4e-48
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 164 5e-48
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali... 142 1e-47
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 162 2e-47
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 165 2e-47
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 164 2e-47
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 180 bits (456), Expect(4) = 2e-65
Identities = 97/144 (67%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LA FY+RF+KDFS A+PL EVIKK GF + +AQE AF+ALKE L +A +L+LP
Sbjct: 1141 RSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPVLSLP 1200
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F K FEIE DASGVGIG VLMQDK+ I Y SEKL GA L+Y TYDKELY LV L+ Q
Sbjct: 1201 DFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQ 1260
Query: 302 HYLWSKEFVIHTDPEFLKYLKGLQ 231
HYLW KEFVIHTD E LK+LKG Q
Sbjct: 1261 HYLWPKEFVIHTDHESLKHLKGQQ 1284
Score = 63.2 bits (152), Expect(4) = 2e-65
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK L+G KL+KRHA W+EFIETFPY+I YKKGK+N++A
Sbjct: 1277 LKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVA 1315
Score = 40.8 bits (94), Expect(4) = 2e-65
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y +SL LLGF+ +K LY +D DF I+++C
Sbjct: 1319 SRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSC 1355
Score = 34.7 bits (78), Expect(4) = 2e-65
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
F + + FLG S++G++VD +KVK I + P PK V E
Sbjct: 1101 FGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGE 1139
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 169 bits (429), Expect(4) = 1e-62
Identities = 90/144 (62%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFSA--SPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LA FY+RF KDFS +PL EV+KK GF + +AQE AF++LK+ L NA +L L
Sbjct: 650 RSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNAPVLILS 709
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
F K FEIE DASG+GIG VLMQD++LI + SEKL GA L+Y TYDKELY LV L+ Q
Sbjct: 710 EFLKTFEIECDASGIGIGAVLMQDQKLIAFFSEKLGGATLNYPTYDKELYALVRALQRWQ 769
Query: 302 HYLWSKEFVIHTDPEFLKYLKGLQ 231
HYLW K FVIHTD E LK+LKG Q
Sbjct: 770 HYLWPKVFVIHTDHESLKHLKGQQ 793
Score = 60.1 bits (144), Expect(4) = 1e-62
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK L+G KL+KRHA W+EFIETF Y+I YKKGK+N++A
Sbjct: 786 LKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVA 824
Score = 40.0 bits (92), Expect(4) = 1e-62
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC + + FLG S++G++VD +KVK I D P PK V E
Sbjct: 610 FCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKTVGE 648
Score = 38.9 bits (89), Expect(4) = 1e-62
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
S++Y+ ++L + L+GF+ +K++Y +D DF ++ AC
Sbjct: 828 SQRYTLLSTLNVKLMGFEQIKEVYETDHDFQEVYKAC 864
>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
Length = 1115
Score = 150 bits (379), Expect(4) = 1e-58
Identities = 81/140 (57%), Positives = 93/140 (66%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFSASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLPNF 477
RSF+ LASFY RF+KDFS+ Q+ AF +KE LC A LL LP+F
Sbjct: 615 RSFHXLASFYLRFVKDFSSE-----------------QDRAFIEIKERLCGAPLLALPDF 657
Query: 476 DKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*QHY 297
K FEIE DASG+GIGGVLM +K I Y SEKL+ L+Y TYDKELY LV L+ QHY
Sbjct: 658 SKTFEIECDASGIGIGGVLMXEKXXITYFSEKLNXTTLNYPTYDKELYALVRALETWQHY 717
Query: 296 LWSKEFVIHTDPEFLKYLKG 237
LW KEFVIHTD E LK+LKG
Sbjct: 718 LWPKEFVIHTDHESLKHLKG 737
Score = 57.8 bits (138), Expect(4) = 1e-58
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIM 142
LK L+G KL++ HA W+EFIETFPY+I YK+GKENI+
Sbjct: 732 LKHLKGQGKLNRXHAKWVEFIETFPYVIKYKQGKENIV 769
Score = 44.3 bits (103), Expect(4) = 1e-58
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 629
FC++K+ FLG S++G+ VD +K K I++ P PK +TE S L S
Sbjct: 575 FCMDKVVFLGYVVSAKGIXVDXEKXKAIKEWPTPKXITEVRSFHXLAS 622
Score = 43.1 bits (100), Expect(4) = 1e-58
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ ++L LLGF+ +K+LY +D DF S++ AC
Sbjct: 774 SRRYALVSTLNAKLLGFEYVKELYANDDDFSSVYGAC 810
>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
Length = 435
Score = 169 bits (428), Expect(4) = 1e-58
Identities = 88/142 (61%), Positives = 106/142 (74%), Gaps = 2/142 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LASFY+RF+KDFS A+PL E++KK F +GE QE AF+ LK L A LL LP
Sbjct: 110 RSFHGLASFYRRFVKDFSSKAAPLTELVKKDQPFVWGEPQEKAFQELKGRLSTAPLLQLP 169
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F K FE+E DASGVGIGGVLMQD + I Y SEKL GA L+Y+TYDKE+Y LV L H Q
Sbjct: 170 DFGKAFEVECDASGVGIGGVLMQDSKPIAYFSEKLKGASLNYSTYDKEVYALVRALAHWQ 229
Query: 302 HYLWSKEFVIHTDPEFLKYLKG 237
HYLW +EF I +D E LK+L+G
Sbjct: 230 HYLWPREFEIKSDHESLKHLRG 251
Score = 61.6 bits (148), Expect(4) = 1e-58
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK L G KL+KRHA W+EFIE+FPY+I YKKGK+N++A
Sbjct: 246 LKHLRGQEKLNKRHAKWVEFIESFPYVIQYKKGKDNVVA 284
Score = 36.6 bits (83), Expect(4) = 1e-58
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 629
F ++K+ FLG S++G++VD KV+ I D P P VT+ S L S
Sbjct: 70 FGVDKVVFLGFVVSAQGVEVDESKVEAIRDWPTPTTVTQVRSFHGLAS 117
Score = 28.1 bits (61), Expect(4) = 1e-58
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNA 32
SRK++ T+L L+GF+++K +Y D ++ +A
Sbjct: 288 SRKFALATTLTSKLMGFESIKLMYAHDPMLKTVHDA 323
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 161 bits (408), Expect(4) = 3e-58
Identities = 86/141 (60%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LASFY+RF++DFS A+PL EVIKK F +G+ Q+ AF LK+ LC+A LL L
Sbjct: 660 RSFHRLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLL 719
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F K FE+E DASG GIG VLM D + I Y SEK SGA L+Y TYDKELY LV L Q
Sbjct: 720 DFSKSFEVECDASGKGIGAVLMPDSKPIAYFSEKPSGATLNYLTYDKELYALVRALATWQ 779
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW +EFV+ TD E LKYLK
Sbjct: 780 HYLWPREFVVKTDHESLKYLK 800
Score = 58.9 bits (141), Expect(4) = 3e-58
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK L+ KL +RHA W+EFIETFPY+I YK+GKEN++A
Sbjct: 796 LKYLKSQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVA 834
Score = 42.4 bits (98), Expect(4) = 3e-58
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNACLISP 17
SR+Y ++L LLGF +K LY +D DFG IF C + P
Sbjct: 838 SRRYVLISTLTSKLLGFDQIKFLYANDSDFGEIFAECKLGP 878
Score = 31.2 bits (69), Expect(4) = 3e-58
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 733 SSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 629
SS+G++VD +K+K I++ P P VTE S L S
Sbjct: 633 SSKGVEVDDEKIKAIKEWPKPNSVTEVRSFHRLAS 667
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 176 bits (445), Expect(3) = 3e-56
Identities = 94/144 (65%), Positives = 110/144 (76%), Gaps = 2/144 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LA FY+RF++DFS A+PL EVIKK GF + +A E AF+ALKE L +A +L+LP
Sbjct: 560 RSFHGLAGFYRRFVRDFSTLAAPLTEVIKKNVGFKWEQAPEDAFQALKEKLTHAPVLSLP 619
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F K FEIE DA GVGIG VLMQDK+ I Y SEKL GA L+Y TYDKELY LV L+ Q
Sbjct: 620 DFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTWQ 679
Query: 302 HYLWSKEFVIHTDPEFLKYLKGLQ 231
HYLW KEFVIHTD E LK+LKG Q
Sbjct: 680 HYLWPKEFVIHTDHESLKHLKGQQ 703
Score = 63.2 bits (152), Expect(3) = 3e-56
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK L+G KL+KRHA W+EFIETFPY+I YKKGK+N++A
Sbjct: 696 LKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVA 734
Score = 28.1 bits (61), Expect(3) = 3e-56
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 733 SSEGLQVDLDKVKPIED*PMPKGV 662
S++G++VD +KVK I + P PK V
Sbjct: 533 STDGVKVDEEKVKAIREWPSPKSV 556
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 160 bits (404), Expect(4) = 5e-56
Identities = 81/141 (57%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF LA FY+RF++DFS A+PL + KK F +G +QE AF LK+ L +A LL LP
Sbjct: 282 RSFLGLAGFYRRFVQDFSTIAAPLNALTKKVVPFTWGTSQENAFHMLKDKLTHAPLLQLP 341
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
NF+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG +L+Y+TYDKELY LV TL+ Q
Sbjct: 342 NFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQ 401
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW K+FVIH+D E LK+++
Sbjct: 402 HYLWPKKFVIHSDHESLKHIR 422
Score = 56.6 bits (135), Expect(4) = 5e-56
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMAH 136
LK + KL++RHA W+EFIE+FPY+I +KKGKENI+A+
Sbjct: 418 LKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIAN 457
Score = 36.6 bits (83), Expect(4) = 5e-56
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ T L + G +T+KD Y D DF + C
Sbjct: 460 SRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHC 496
Score = 33.5 bits (75), Expect(4) = 5e-56
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC ++++FL + +G++VD KV+ I+ P PK V++
Sbjct: 242 FCTDRVSFLDYVVTPQGIEVDQAKVEAIQSWPTPKTVSQ 280
>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1450
Score = 148 bits (373), Expect(4) = 1e-51
Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF +A FY+RF+KDFS A+PL E+ K+ F + AQ F LK+ L +A L LP
Sbjct: 884 RSFLGVAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAVAQRNTFDTLKDKLTHAPLFQLP 943
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG L+Y+TYDK+L+ LV TL+ Q
Sbjct: 944 DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKKLFALVQTLETWQ 1003
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVI +D E LK+++
Sbjct: 1004 HYLWPKEFVIRSDHESLKHIR 1024
Score = 55.5 bits (132), Expect(4) = 1e-51
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK + KL+ RHA W+EFIE+FPY+I +KKGKEN++A
Sbjct: 1020 LKHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIA 1058
Score = 36.2 bits (82), Expect(4) = 1e-51
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC+++++FLG + +G++VD KV+ I P+P +T+
Sbjct: 844 FCIDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQ 882
Score = 32.0 bits (71), Expect(4) = 1e-51
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ + L + G +T+K+ Y D DF + C
Sbjct: 1062 SRRYTMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNC 1098
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 148 bits (373), Expect(4) = 1e-51
Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF +A FY+RF+KDFS A+PL E+ K+ F + AQ F LK+ L +A L LP
Sbjct: 826 RSFLGVAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAVAQRNTFDTLKDKLTHAPLFQLP 885
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG L+Y+TYDK+L+ LV TL+ Q
Sbjct: 886 DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKKLFALVQTLETWQ 945
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVI +D E LK+++
Sbjct: 946 HYLWPKEFVIRSDHESLKHIR 966
Score = 55.5 bits (132), Expect(4) = 1e-51
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK + KL+ RHA W+EFIE+FPY+I +KKGKEN++A
Sbjct: 962 LKHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIA 1000
Score = 36.2 bits (82), Expect(4) = 1e-51
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC+++++FLG + +G++VD KV+ I P+P +T+
Sbjct: 786 FCIDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQ 824
Score = 32.0 bits (71), Expect(4) = 1e-51
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ + L + G +T+K+ Y D DF + C
Sbjct: 1004 SRRYTMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNC 1040
>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
Length = 1357
Score = 148 bits (373), Expect(4) = 1e-51
Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF +A FY+RF+KDFS A+PL E+ K+ F + AQ F LK+ L +A L LP
Sbjct: 791 RSFLGVAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAVAQRNTFDTLKDKLTHAPLFQLP 850
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG L+Y+TYDK+L+ LV TL+ Q
Sbjct: 851 DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKKLFALVQTLETWQ 910
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVI +D E LK+++
Sbjct: 911 HYLWPKEFVIRSDHESLKHIR 931
Score = 55.5 bits (132), Expect(4) = 1e-51
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK + KL+ RHA W+EFIE+FPY+I +KKGKEN++A
Sbjct: 927 LKHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIA 965
Score = 36.2 bits (82), Expect(4) = 1e-51
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC+++++FLG + +G++VD KV+ I P+P +T+
Sbjct: 751 FCIDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQ 789
Score = 32.0 bits (71), Expect(4) = 1e-51
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ + L + G +T+K+ Y D DF + C
Sbjct: 969 SRRYTMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNC 1005
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 158 bits (399), Expect(4) = 3e-50
Identities = 79/142 (55%), Positives = 104/142 (73%), Gaps = 2/142 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFSA--SPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LASFY+RFIKDFS +P+ E +KK F +G+ E +F +KE LC + +LTLP
Sbjct: 835 RSFHGLASFYRRFIKDFSTLMAPITECMKKGE-FKWGDKAESSFNIIKEKLCESPILTLP 893
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
NF+K+FE+E DASG+GIG VL+Q+ + I Y SEKLSGA L+Y+TYDKE Y +V L H
Sbjct: 894 NFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVRALNHWS 953
Query: 302 HYLWSKEFVIHTDPEFLKYLKG 237
HYL + FV+H+D E LKY+ G
Sbjct: 954 HYLKPRPFVLHSDHEALKYING 975
Score = 43.1 bits (100), Expect(4) = 3e-50
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK + G KL+ RHA W+EF+++F + Y +GK+NI+A
Sbjct: 970 LKYINGQHKLNHRHAKWVEFLQSFNFSSKYIEGKDNIVA 1008
Score = 35.8 bits (81), Expect(4) = 3e-50
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 629
F ++ FLG S G+ VD +KVK I+ P+PK +T+ S L S
Sbjct: 795 FMQNEVQFLGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHGLAS 842
Score = 30.0 bits (66), Expect(4) = 3e-50
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDF 50
SR++ + ++ +LGF+ +K+LY D DF
Sbjct: 1012 SRRFIMLSFMEQRVLGFEYMKELYVEDPDF 1041
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 164 bits (414), Expect(3) = 4e-50
Identities = 86/142 (60%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
R F+ LASFY+RF+KDFS A+PL E++KK GF +G+ QE AF ALK L NA +L +P
Sbjct: 112 RGFHGLASFYRRFVKDFSTLAAPLTEIVKKNVGFKWGKKQEEAFAALKHRLTNAPILAMP 171
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
NF K FEIE D S VGIG VL+Q+ I Y SEKL A L+Y+TYDK+LY LV L+ Q
Sbjct: 172 NFAKSFEIECDVSNVGIGAVLLQEGHPIAYFSEKLGAAALNYSTYDKKLYALVRALQTWQ 231
Query: 302 HYLWSKEFVIHTDPEFLKYLKG 237
HYL KEFVIH+D E LKYLKG
Sbjct: 232 HYLLPKEFVIHSDHESLKYLKG 253
Score = 41.6 bits (96), Expect(3) = 4e-50
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+++ L+ L G ++LKD+Y DVDF IF AC
Sbjct: 290 SRRHALLAMLETKLFGLESLKDMYVHDVDFAEIFAAC 326
Score = 40.8 bits (94), Expect(3) = 4e-50
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC + + FLG S EG++VD++KVK I++ P PK ++E
Sbjct: 72 FCTDHVVFLGFVVSVEGVRVDVEKVKAIQEWPTPKTLSE 110
Score = 57.8 bits (138), Expect = 4e-06
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 288 EGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
E V HS H S LK L+G KL+KRHA W+EF+E FPY+I +KKGK N++A
Sbjct: 238 EFVIHSDHES--LKYLKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGNVVA 286
>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
Length = 750
Score = 122 bits (307), Expect(4) = 8e-50
Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LASFY++F+KDFS A+ + E++KK GF LC A LL LP
Sbjct: 286 RSFHGLASFYRQFVKDFSTLAALVTEIVKKFVGFK---------------LCGAPLLALP 330
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F K FEIE DAS +K+ I Y SEKL+GA L+Y YDKELY LV L+ Q
Sbjct: 331 DFSKTFEIECDAS----------EKQPIAYFSEKLNGAALNYPKYDKELYALVRALETWQ 380
Query: 302 HYLWSKEFVIHTDPEFLKYLKG 237
HYLW KEFVIH D E LK+LKG
Sbjct: 381 HYLWPKEFVIHADHESLKHLKG 402
Score = 61.6 bits (148), Expect(4) = 8e-50
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK L+G KL++RHA W+EFIETFPY+I YK+GKENI+A
Sbjct: 397 LKHLKGQGKLNRRHAKWVEFIETFPYVIKYKQGKENIVA 435
Score = 44.3 bits (103), Expect(4) = 8e-50
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 629
FC++K+ FLG S++G++VD +KVK I++ P P +TE S L S
Sbjct: 246 FCMDKVVFLGYVVSAKGIEVDEEKVKAIKEWPTPMSITEVRSFHGLAS 293
Score = 37.0 bits (84), Expect(4) = 8e-50
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNA 32
SR+Y+ ++L LLGF+ +++LY +D DF +++ A
Sbjct: 439 SRRYALVSTLNAKLLGFEYVEELYANDDDFANVYGA 474
>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 148 bits (373), Expect(4) = 9e-49
Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFSA--SPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LA+FY+RF++ FS+ +P+ E +KK F++GE QE +F +KE LC A +L LP
Sbjct: 857 RSFHGLATFYRRFVRHFSSIVAPITECLKKGR-FSWGEEQERSFADIKEKLCTAPVLALP 915
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
NF+K+FE+E DASGVG+G VL QDKR + + SEKLS A ++TYD+E Y +V LK +
Sbjct: 916 NFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWE 975
Query: 302 HYLWSKEFVIHTDPEFLKYLKGLQN 228
HYL KEFV+ TD + LKY+ +N
Sbjct: 976 HYLIQKEFVLFTDHQALKYINSQKN 1000
Score = 39.3 bits (90), Expect(4) = 9e-49
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC K+ FLG G+QVD +K+K I D P PK V+E
Sbjct: 817 FCTNKLLFLGFVVGEHGIQVDDEKIKAILDWPAPKTVSE 855
Score = 38.1 bits (87), Expect(4) = 9e-49
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+ S +L ++GF+ LK+LY D DFG I+ C
Sbjct: 1034 SRRASLLITLTQEVVGFECLKELYEGDADFGEIWTKC 1070
Score = 36.6 bits (83), Expect(4) = 9e-49
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK + +DK HA W+ F++ F ++I + GK N +A
Sbjct: 992 LKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVA 1030
>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 150 bits (378), Expect(4) = 4e-48
Identities = 76/145 (52%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF+ LA+FY RF++ FS A+P+ E +KK F++GE QE +F +KE LC A +L LP
Sbjct: 865 RSFHGLATFYMRFVRHFSSIAAPITECLKKGR-FSWGEEQERSFADIKEKLCTAPVLALP 923
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
NF+K+FE+E DASGVG+G VL+QDKR + + SEKLS A ++TYD+E Y +V LK +
Sbjct: 924 NFEKVFEVECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWE 983
Query: 302 HYLWSKEFVIHTDPEFLKYLKGLQN 228
HYL KEFV+ TD + LKY+ +N
Sbjct: 984 HYLIQKEFVLFTDHQALKYINSQKN 1008
Score = 39.3 bits (90), Expect(4) = 4e-48
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC K+ FLG G+QVD +K+K I D P PK V+E
Sbjct: 825 FCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSE 863
Score = 36.6 bits (83), Expect(4) = 4e-48
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
LK + +DK HA W+ F++ F ++I + GK N +A
Sbjct: 1000 LKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVA 1038
Score = 33.9 bits (76), Expect(4) = 4e-48
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+ S +L ++GF+ LK+LY D DF I+ C
Sbjct: 1042 SRRASLLITLTQEVVGFECLKELYEGDDDFREIWTKC 1078
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 164 bits (416), Expect(3) = 5e-48
Identities = 84/141 (59%), Positives = 108/141 (76%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF LA FY+RF++DFS A+PL E+ KK +++G AQE AF LK+ L +A LL LP
Sbjct: 1005 RSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLLQLP 1064
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F+K FE+E DASG+G+GGVL+QD + + Y SEKLSG L+Y+TYDKELY LV TL+ Q
Sbjct: 1065 DFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQ 1124
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVIH+D E LK++K
Sbjct: 1125 HYLWPKEFVIHSDHESLKHIK 1145
Score = 38.9 bits (89), Expect(3) = 5e-48
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC ++++FLG + +G++VD K++ IE P PK VT+
Sbjct: 965 FCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQ 1003
Score = 35.8 bits (81), Expect(3) = 5e-48
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ + L + G +T+KD Y D DF + C
Sbjct: 1183 SRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENC 1219
Score = 56.6 bits (135), Expect = 9e-06
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -1
Query: 300 LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
L+ E V HS H S LK ++ KL++RHA W+EFIETFPY+I KKGK+N++A
Sbjct: 1127 LWPKEFVIHSDHES--LKHIKSQAKLNRRHAKWVEFIETFPYVIKDKKGKDNVIA 1179
>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
gi|7267450|emb|CAB81146.1| putative polyprotein
[Arabidopsis thaliana]
Length = 1054
Score = 142 bits (358), Expect(3) = 1e-47
Identities = 75/118 (63%), Positives = 87/118 (73%)
Frame = -2
Query: 584 VIKKTNGFNYGEAQELAFKALKENLCNALLLTLPNFDKMFEIEYDASGVGIGGVLMQDKR 405
V +K GF + +AQE AF+ALKE L N+ + LPNF K FEIE DASG+GIG VLMQD +
Sbjct: 699 VSEKDIGFKWEDAQENAFQALKEKLTNSSVPILPNFMKSFEIECDASGLGIGAVLMQDHK 758
Query: 404 LIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*QHYLWSKEFVIHTDPEFLKYLKGLQ 231
I Y SEKL GA L+Y TYDKELY LV L+ QHYLW K+FVIHTD E LK+LKG Q
Sbjct: 759 PIAYFSEKLGGATLNYPTYDKELYALVRALQTWQHYLWPKKFVIHTDHESLKHLKGQQ 816
Score = 55.1 bits (131), Expect(3) = 1e-47
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -1
Query: 255 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKEN---IMAHENIHFSLLYSCICLGFK 85
LK L+G KL+KRHA W+EFIETFPY+I YKK + + +M H FS I GFK
Sbjct: 809 LKHLKGQQKLNKRHARWVEFIETFPYVIKYKKREAHGGGLMRHSATKFSPFE--IVYGFK 866
Score = 40.8 bits (94), Expect(3) = 1e-47
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTEE 653
FC + + FLG S++G++VD +KVK I + P PK V+E+
Sbjct: 663 FCTDNLVFLGFVVSADGIKVDEEKVKAIREWPNPKNVSEK 702
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 162 bits (411), Expect(3) = 2e-47
Identities = 83/141 (58%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF A FY+RF++DFS A+PL E+ KK +++G AQE AF LK+ L +A LL LP
Sbjct: 1008 RSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLLQLP 1067
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F+K FE+E DASG+G+GGVL+QD + + Y SEKLSG L+Y+TYDKELY LV TL+ Q
Sbjct: 1068 DFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQ 1127
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVIH+D E LK++K
Sbjct: 1128 HYLWPKEFVIHSDHESLKHIK 1148
Score = 38.9 bits (89), Expect(3) = 2e-47
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC ++++FLG + +G++VD K++ IE P PK VT+
Sbjct: 968 FCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQ 1006
Score = 35.8 bits (81), Expect(3) = 2e-47
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ + L + G +T+KD Y D DF + C
Sbjct: 1186 SRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENC 1222
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -1
Query: 300 LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
L+ E V HS H S LK ++ KL++RHA W+EFIETFPY+I +KKGK+N++A
Sbjct: 1130 LWPKEFVIHSDHES--LKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKDNVIA 1182
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 165 bits (417), Expect(3) = 2e-47
Identities = 83/141 (58%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF LA FY+RF+KDFS A+PL E+ KK F++G+ QE AF LK+ L +A LL LP
Sbjct: 952 RSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPLLQLP 1011
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
+F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG++L+Y+TYDKELY LV TL+ Q
Sbjct: 1012 DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALVRTLETWQ 1071
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVIH+D E LK+++
Sbjct: 1072 HYLWPKEFVIHSDHESLKHIR 1092
Score = 38.5 bits (88), Expect(3) = 2e-47
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC ++++FLG + +G++VD KV+ I PMPK +T+
Sbjct: 912 FCTDRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKTITQ 950
Score = 33.9 bits (76), Expect(3) = 2e-47
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ L + G +T+KD Y D DF + C
Sbjct: 1130 SRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHC 1166
Score = 57.4 bits (137), Expect = 5e-06
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -1
Query: 300 LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
L+ E V HS H S LK + KL++RHA W+EFIE+FPY+I +KKGKENI+A
Sbjct: 1074 LWPKEFVIHSDHES--LKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIA 1126
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 164 bits (416), Expect(3) = 2e-47
Identities = 86/141 (60%), Positives = 105/141 (74%), Gaps = 2/141 (1%)
Frame = -2
Query: 656 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 483
RSF LA FY+RF++DFS A+PL EV KK F +G AQE AF LK+ L A LL LP
Sbjct: 993 RSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVLKDKLTYAPLLQLP 1052
Query: 482 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 303
NF+K FE+E DASG+G+GGVL+QD + + Y SEK SG L+Y+TYDKELY LV TL+ Q
Sbjct: 1053 NFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQ 1112
Query: 302 HYLWSKEFVIHTDPEFLKYLK 240
HYLW KEFVIH+D E LK++K
Sbjct: 1113 HYLWPKEFVIHSDHESLKHIK 1133
Score = 38.1 bits (87), Expect(3) = 2e-47
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = -3
Query: 772 FCLEKITFLG*DFSSEGLQVDLDKVKPIED*PMPKGVTE 656
FC ++++FLG + +G++VD K++ IE P PK VT+
Sbjct: 953 FCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKTVTQ 991
Score = 34.3 bits (77), Expect(3) = 2e-47
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 139 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 29
SR+Y+ + L + G +T+KD Y D +F + C
Sbjct: 1171 SRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNC 1207
Score = 59.7 bits (143), Expect = 1e-06
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -1
Query: 300 LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 139
L+ E V HS H S LK ++ KL++RHA W+EFIETFPY+I +KKGKEN++A
Sbjct: 1115 LWPKEFVIHSDHES--LKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKENVIA 1167