BLASTX nr result

ID: Catharanthus22_contig00005934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00005934
         (1039 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_006737703.1| hypothetical protein, partial [Lactobacillus...    58   5e-06

>ref|WP_006737703.1| hypothetical protein, partial [Lactobacillus iners]
           gi|325477781|gb|EGC80917.1| hypothetical protein
           HMPREF0523_1106 [Lactobacillus iners UPII 60-B]
          Length = 156

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 23/51 (45%), Positives = 27/51 (52%)
 Frame = -2

Query: 888 WNWSRFWFWRWLWIWGRMGFWRHAFEFSGTRCRWRLWSWLRPWMGIWHRVW 736
           W W RFWFW WLW+W  +  W   F F       RLW WL  W  +W R+W
Sbjct: 63  WFWFRFWFWLWLWLWLWLWLW---FWF-------RLWLWLWLWFRLWFRLW 103


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