BLASTX nr result

ID: Catharanthus22_contig00005906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00005906
         (828 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79188.1| hypothetical protein VITISV_033760 [Vitis vinifera]    42   1e-06
emb|CAN66076.1| hypothetical protein VITISV_026162 [Vitis vinifera]    43   3e-06
emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera]    43   8e-06

>emb|CAN79188.1| hypothetical protein VITISV_033760 [Vitis vinifera]
          Length = 902

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = -3

Query: 169 ESLKKKVNDLTLCIERFTQGKENFEKLLGSQRSLYDKNSIGYNHS-NASSKQTYFVK 2
           E LKKK   LT  +  F+ G+++FE +L SQ+ ++DK  +G+  S N    + YFVK
Sbjct: 344 EVLKKKKEWLTSSLSIFSCGQKSFEIILASQKCVFDKQGLGFKSSKNQKYFKNYFVK 400



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 27/99 (27%), Positives = 47/99 (47%)
 Frame = -2

Query: 545 DQDTSESEGDEKKNMCFMATENEIQXXXXXXXSLIDDNCDDPSSVFIEMHDKCKKVSKRN 366
           ++ + E +  E  NMCFMA ++  +          + + +D   VF E+++  +K+S +N
Sbjct: 249 EESSEEEKEKEVANMCFMAIDDLDEVN-------FNFSDEDMHDVFEELYEDFEKLSLKN 301

Query: 365 KDLKNKT*VLLDENSKLICENKSLIESLEILKNEKEGSN 249
             LKNK    + E  + + E K     +EI K   E  N
Sbjct: 302 NSLKNK----IQELERELEEVKEKFSIVEISKTHLEKDN 336


>emb|CAN66076.1| hypothetical protein VITISV_026162 [Vitis vinifera]
          Length = 523

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = -3

Query: 169 ESLKKKVNDLTLCIERFTQGKENFEKLLGSQRSLYDKNSIGYNHS-NASSKQTYFVK 2
           E LKKK   LT  +  F+ G+++FE +L SQ+ ++DK  +G+  S N    + YFVK
Sbjct: 404 EILKKKNEWLTSSLSIFSCGQKSFEMILSSQKCVFDKQGLGFKSSKNQKYFKNYFVK 460



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
 Frame = -2

Query: 542 QDTSESEGD-EKKNMCFMATENEIQXXXXXXXSLIDDNCDDPSSVFIEMHDKCKKVSKRN 366
           +++SE E + E  NMCFMA ++  +          + + +D   VF E+++  +K+S +N
Sbjct: 309 EESSEEENEKEVANMCFMAIDDIDEVNS-------NFSDEDMHDVFEELYEDFEKLSLKN 361

Query: 365 KDLKNKT*VL------------LDENSK--LICENKSLIESLEILKNEKE 258
             LK K   L            +DE SK  L  EN+ L    EILK + E
Sbjct: 362 NSLKKKIQKLXKELEEVKENFSIDELSKTHLKKENEILRSENEILKKKNE 411


>emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera]
          Length = 1000

 Score = 42.7 bits (99), Expect(2) = 8e-06
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = -3

Query: 169 ESLKKKVNDLTLCIERFTQGKENFEKLLGSQRSLYDKNSIGYNHS-NASSKQTYFVK 2
           E LKKK   LT  +  F+ G+++FE +L SQ+ ++DK  +G+  S N    + YFVK
Sbjct: 436 EILKKKNEWLTSSLSIFSCGQKSFEMILASQKCVFDKQGLGFKSSKNQKYFKNYFVK 492



 Score = 33.9 bits (76), Expect(2) = 8e-06
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
 Frame = -2

Query: 539 DTSESEGDEKK----NMCFMATENEIQXXXXXXXSLIDDNCDDPSSVFIEMHDKCKKVSK 372
           ++ ES  +EK+    NMCFMA ++  +          + + +D   +F E+++  +K+S 
Sbjct: 339 ESEESSXEEKEKEVANMCFMAIDDLDEVNS-------NSSDEDMHVIFEELYEDFEKLSL 391

Query: 371 RNKDLKNKT*VLLDENSKLICENKSLIESLEILKNEKEGSNNDF*KLVLENKN 213
           +N  LK +    + E  K + E K      EI K   E  N      +L N+N
Sbjct: 392 KNNSLKKR----IQELEKELEEVKEKFSIDEISKTHLEKENE-----ILRNEN 435


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