BLASTX nr result

ID: Catharanthus22_contig00005802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00005802
         (381 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW15964.1| hypothetical protein PHAVU_007G117900g [Phaseolus...    59   9e-07
ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog...    58   2e-06
ref|XP_006606426.1| PREDICTED: HIV Tat-specific factor 1 homolog...    56   4e-06
ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog...    56   4e-06
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...    55   1e-05

>gb|ESW15964.1| hypothetical protein PHAVU_007G117900g [Phaseolus vulgaris]
          Length = 509

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -1

Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292
           RQ+HASEDDGS+NHALVRDLQE+A RLEQF
Sbjct: 473 RQVHASEDDGSVNHALVRDLQEDAIRLEQF 502


>ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 503

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -1

Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292
           RQIHASEDDGS+NHALVRDL+E+A RLEQF
Sbjct: 467 RQIHASEDDGSVNHALVRDLEEDAIRLEQF 496


>ref|XP_006606426.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform X2 [Glycine
           max] gi|571569665|ref|XP_006606427.1| PREDICTED: HIV
           Tat-specific factor 1 homolog isoform X3 [Glycine max]
           gi|571569667|ref|XP_006606428.1| PREDICTED: HIV
           Tat-specific factor 1 homolog isoform X4 [Glycine max]
          Length = 445

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -1

Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292
           RQIHASEDDGS+NHALVRDL+E+  RLEQF
Sbjct: 409 RQIHASEDDGSVNHALVRDLEEDVIRLEQF 438


>ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform X1 [Glycine
           max]
          Length = 500

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -1

Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292
           RQIHASEDDGS+NHALVRDL+E+  RLEQF
Sbjct: 464 RQIHASEDDGSVNHALVRDLEEDVIRLEQF 493


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -1

Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292
           RQ+HASEDDGS+NHALVRDL ++A RLEQF
Sbjct: 482 RQVHASEDDGSVNHALVRDLDQDAARLEQF 511


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