BLASTX nr result
ID: Catharanthus22_contig00005802
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00005802 (381 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ESW15964.1| hypothetical protein PHAVU_007G117900g [Phaseolus... 59 9e-07 ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog... 58 2e-06 ref|XP_006606426.1| PREDICTED: HIV Tat-specific factor 1 homolog... 56 4e-06 ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog... 56 4e-06 ref|XP_002512940.1| Splicing factor U2AF-associated protein, put... 55 1e-05 >gb|ESW15964.1| hypothetical protein PHAVU_007G117900g [Phaseolus vulgaris] Length = 509 Score = 58.5 bits (140), Expect = 9e-07 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = -1 Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292 RQ+HASEDDGS+NHALVRDLQE+A RLEQF Sbjct: 473 RQVHASEDDGSVNHALVRDLQEDAIRLEQF 502 >ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max] Length = 503 Score = 57.8 bits (138), Expect = 2e-06 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = -1 Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292 RQIHASEDDGS+NHALVRDL+E+A RLEQF Sbjct: 467 RQIHASEDDGSVNHALVRDLEEDAIRLEQF 496 >ref|XP_006606426.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform X2 [Glycine max] gi|571569665|ref|XP_006606427.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform X3 [Glycine max] gi|571569667|ref|XP_006606428.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform X4 [Glycine max] Length = 445 Score = 56.2 bits (134), Expect = 4e-06 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = -1 Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292 RQIHASEDDGS+NHALVRDL+E+ RLEQF Sbjct: 409 RQIHASEDDGSVNHALVRDLEEDVIRLEQF 438 >ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform X1 [Glycine max] Length = 500 Score = 56.2 bits (134), Expect = 4e-06 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = -1 Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292 RQIHASEDDGS+NHALVRDL+E+ RLEQF Sbjct: 464 RQIHASEDDGSVNHALVRDLEEDVIRLEQF 493 >ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] Length = 518 Score = 55.1 bits (131), Expect = 1e-05 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = -1 Query: 381 RQIHASEDDGSINHALVRDLQEEAYRLEQF 292 RQ+HASEDDGS+NHALVRDL ++A RLEQF Sbjct: 482 RQVHASEDDGSVNHALVRDLDQDAARLEQF 511