BLASTX nr result
ID: Catharanthus22_contig00005563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00005563
(706 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI32330.3| unnamed protein product [Vitis vinifera] 194 2e-47
ref|XP_004493646.1| PREDICTED: U6 snRNA-associated Sm-like prote... 189 7e-46
gb|ESW34388.1| hypothetical protein PHAVU_001G148500g [Phaseolus... 189 1e-45
ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Me... 189 1e-45
ref|XP_004493645.1| PREDICTED: BTB/POZ and MATH domain-containin... 187 2e-45
ref|XP_004294156.1| PREDICTED: U6 snRNA-associated Sm-like prote... 187 2e-45
ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containin... 187 3e-45
ref|XP_006444137.1| hypothetical protein CICLE_v10023059mg [Citr... 187 4e-45
ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus t... 187 4e-45
ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like prote... 186 5e-45
gb|EPS69310.1| hypothetical protein M569_05456 [Genlisea aurea] 186 6e-45
gb|EOX94843.1| BTB-POZ and MATH domain 2 [Theobroma cacao] 186 6e-45
gb|EMJ13495.1| hypothetical protein PRUPE_ppa013967mg [Prunus pe... 186 6e-45
ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ... 186 6e-45
gb|EXB42565.1| hypothetical protein L484_011338 [Morus notabilis] 186 8e-45
gb|AFK37214.1| unknown [Medicago truncatula] 185 1e-44
gb|ABK93861.1| unknown [Populus trichocarpa] 185 1e-44
ref|XP_006358427.1| PREDICTED: U6 snRNA-associated Sm-like prote... 184 2e-44
ref|XP_006305805.1| hypothetical protein CARUB_v10010754mg [Caps... 183 4e-44
ref|XP_004242327.1| PREDICTED: U6 snRNA-associated Sm-like prote... 183 4e-44
>emb|CBI32330.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 194 bits (494), Expect = 2e-47
Identities = 99/119 (83%), Positives = 105/119 (88%)
Frame = +1
Query: 34 HSGYTLLFCVRDQRRTPATHPSSDYKMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQ 213
H+G L R+QR + + S + MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQ
Sbjct: 19 HNGSGLRSRPRNQRSSRFSPLSFLFNMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQ 78
Query: 214 YLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
YLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 79 YLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 137
>ref|XP_004493646.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Cicer
arietinum]
Length = 93
Score = 189 bits (480), Expect = 7e-46
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
>gb|ESW34388.1| hypothetical protein PHAVU_001G148500g [Phaseolus vulgaris]
Length = 125
Score = 189 bits (479), Expect = 1e-45
Identities = 92/93 (98%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 33 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 92
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 93 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 125
>ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula]
gi|355500846|gb|AES82049.1| SnRNP core Sm protein
Sm-X5-like protein [Medicago truncatula]
gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
Length = 93
Score = 189 bits (479), Expect = 1e-45
Identities = 92/93 (98%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93
>ref|XP_004493645.1| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Cicer
arietinum]
Length = 497
Score = 187 bits (476), Expect = 2e-45
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +1
Query: 109 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 288
+ LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 404 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 463
Query: 289 CFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
CFIRGSVVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 464 CFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 497
>ref|XP_004294156.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Fragaria
vesca subsp. vesca]
Length = 93
Score = 187 bits (476), Expect = 2e-45
Identities = 92/93 (98%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFK+LVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis
vinifera]
Length = 489
Score = 187 bits (475), Expect = 3e-45
Identities = 91/94 (96%), Positives = 93/94 (98%)
Frame = +1
Query: 109 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 288
+ LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 396 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 455
Query: 289 CFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
CFIRGSVVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 456 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 489
>ref|XP_006444137.1| hypothetical protein CICLE_v10023059mg [Citrus clementina]
gi|568852209|ref|XP_006479772.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like [Citrus
sinensis] gi|557546399|gb|ESR57377.1| hypothetical
protein CICLE_v10023059mg [Citrus clementina]
Length = 93
Score = 187 bits (474), Expect = 4e-45
Identities = 91/93 (97%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPP+GVDV+LLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDVDLLHDATRREARGG 93
>ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus trichocarpa]
gi|224118384|ref|XP_002331469.1| predicted protein
[Populus trichocarpa] gi|118484877|gb|ABK94305.1|
unknown [Populus trichocarpa]
gi|222841481|gb|EEE79028.1| small nuclear
ribonucleoprotein D [Populus trichocarpa]
Length = 93
Score = 187 bits (474), Expect = 4e-45
Identities = 91/93 (97%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVDV+LLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93
>ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform 1
[Cucumis sativus] gi|449436293|ref|XP_004135927.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
isoform 2 [Cucumis sativus]
gi|449436295|ref|XP_004135928.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like isoform 3
[Cucumis sativus] gi|449489026|ref|XP_004158193.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
isoform 1 [Cucumis sativus]
gi|449489028|ref|XP_004158194.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like isoform 2
[Cucumis sativus] gi|449489032|ref|XP_004158195.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
isoform 3 [Cucumis sativus]
Length = 93
Score = 186 bits (473), Expect = 5e-45
Identities = 91/93 (97%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQ+KYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPP+GVDVELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDVELLHDATRREARGG 93
>gb|EPS69310.1| hypothetical protein M569_05456 [Genlisea aurea]
Length = 93
Score = 186 bits (472), Expect = 6e-45
Identities = 90/93 (96%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRV+DQ+KYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVIDQEKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPP+GVDVELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDVELLHDATRREARGG 93
>gb|EOX94843.1| BTB-POZ and MATH domain 2 [Theobroma cacao]
Length = 493
Score = 186 bits (472), Expect = 6e-45
Identities = 90/94 (95%), Positives = 93/94 (98%)
Frame = +1
Query: 109 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 288
+ LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 400 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 459
Query: 289 CFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
CFIRGSVVRYVQLPP+GVD+ELLHDATRREARGG
Sbjct: 460 CFIRGSVVRYVQLPPDGVDIELLHDATRREARGG 493
>gb|EMJ13495.1| hypothetical protein PRUPE_ppa013967mg [Prunus persica]
Length = 93
Score = 186 bits (472), Expect = 6e-45
Identities = 91/93 (97%), Positives = 93/93 (100%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFK+LVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQ+KYPHMLSVRNC
Sbjct: 1 MLFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
putative [Ricinus communis]
Length = 500
Score = 186 bits (472), Expect = 6e-45
Identities = 90/94 (95%), Positives = 93/94 (98%)
Frame = +1
Query: 109 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 288
+ LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 466
Query: 289 CFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
CFIRGSVVRYVQLPPEGVD++LLHDATRREARGG
Sbjct: 467 CFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500
>gb|EXB42565.1| hypothetical protein L484_011338 [Morus notabilis]
Length = 140
Score = 186 bits (471), Expect = 8e-45
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 115 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 294
LFFSYFK+LVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF
Sbjct: 49 LFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 108
Query: 295 IRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
IRGSVVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 109 IRGSVVRYVQLPPEGVDVELLHDATRREARGG 140
>gb|AFK37214.1| unknown [Medicago truncatula]
Length = 93
Score = 185 bits (470), Expect = 1e-44
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQD+YPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDRYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVD+ELLHDATRREAR G
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREARSG 93
>gb|ABK93861.1| unknown [Populus trichocarpa]
Length = 93
Score = 185 bits (469), Expect = 1e-44
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVG+EVTVELKNDLAIRG LHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGKEVTVELKNDLAIRGNLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPPEGVDV+LLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93
>ref|XP_006358427.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Solanum
tuberosum]
Length = 93
Score = 184 bits (467), Expect = 2e-44
Identities = 89/93 (95%), Positives = 92/93 (98%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVD+DKYPHM SVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDEDKYPHMRSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPP+GVD+ELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDIELLHDATRREARGG 93
>ref|XP_006305805.1| hypothetical protein CARUB_v10010754mg [Capsella rubella]
gi|567156028|ref|XP_006418245.1| hypothetical protein
EUTSA_v10009199mg [Eutrema salsugineum]
gi|482574516|gb|EOA38703.1| hypothetical protein
CARUB_v10010754mg [Capsella rubella]
gi|557096016|gb|ESQ36598.1| hypothetical protein
EUTSA_v10009199mg [Eutrema salsugineum]
Length = 93
Score = 183 bits (465), Expect = 4e-44
Identities = 89/93 (95%), Positives = 92/93 (98%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPP+GVDV+LLHDA RREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 93
>ref|XP_004242327.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Solanum
lycopersicum]
Length = 93
Score = 183 bits (465), Expect = 4e-44
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = +1
Query: 112 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 291
MLFFSYFKD+VGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVD+DKYPHM SVRNC
Sbjct: 1 MLFFSYFKDMVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDEDKYPHMRSVRNC 60
Query: 292 FIRGSVVRYVQLPPEGVDVELLHDATRREARGG 390
FIRGSVVRYVQLPP+GVD+ELLHDATRREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDIELLHDATRREARGG 93