BLASTX nr result
ID: Catharanthus22_contig00005086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00005086
(2450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 853 0.0
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 852 0.0
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 808 0.0
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 742 0.0
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 662 0.0
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 658 0.0
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 656 0.0
gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Syna... 650 0.0
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 650 0.0
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 644 0.0
gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus pe... 642 0.0
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr... 640 0.0
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 637 e-180
ref|NP_175971.3| probable RNA polymerase II transcription factor... 637 e-180
ref|XP_002310512.2| transcription factor-related family protein ... 630 e-178
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc... 627 e-177
ref|XP_002307021.1| transcription factor-related family protein ... 625 e-176
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 623 e-175
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc... 622 e-175
gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus... 617 e-174
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum tuberosum]
Length = 599
Score = 853 bits (2204), Expect = 0.0
Identities = 433/599 (72%), Positives = 506/599 (84%), Gaps = 2/599 (0%)
Frame = -2
Query: 2008 MAD-KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE 1832
MAD K+VKRA YK+S K G+PGVL LT+ERF FMPNDP+ +T+ NVEF IKG +SSKE
Sbjct: 1 MADGKLVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60
Query: 1831 -SAKQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNE 1655
S+KQALLNLT+ QG N+ FEF++FPDRD C++ VA AIA GE GKA EKPA P +E
Sbjct: 61 CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-HDE 119
Query: 1654 QLSTAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVAL 1475
QLS EM RIKLLQENS+LQKLH+ VI GILSEAEFWA RKKLLEQ+ ++PKQRVAL
Sbjct: 120 QLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSENKKPKQRVAL 179
Query: 1474 KNDMLSTKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSR 1295
KNDM S KPLSDGQ+NRVTFN T E+IHQIFAEKPAVRQAYLKFVP KM+EKEFWTKYSR
Sbjct: 180 KNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSR 239
Query: 1294 AEYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIH 1115
AEYLHST+N+V AVFLKQDDML +EARRKIRRVDPTLDMEADEGDDY+H
Sbjct: 240 AEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMH 299
Query: 1114 IQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRK 935
+ DHGL +G++K++LEPQYEP++RSFSQ LNQH AVVL+GR+IDVELGDTR+VAEA TR
Sbjct: 300 LPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRT 359
Query: 934 KQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALK 755
QAE A E+SD + +ER+++ SR+AEIEDLQ P+DPPVA LSIKDPRDYFDSQQANA+K
Sbjct: 360 YQAEQATEVSDENAYRERVKKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIK 419
Query: 754 ALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISS 575
ALGD +G + LK SVS +A+ S+K+ ISEI + G+ EP+++ EVALKV NGL+QNISS
Sbjct: 420 ALGDAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISS 479
Query: 574 TKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDA 395
TKY LG+NP+ESVLD+LP+ TK ELLLHWTSIQELLKHFWSSYPITTKY KV RLKDA
Sbjct: 480 TKYYLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDA 539
Query: 394 MSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
MS+IYPKLQE+KESVQSD+RHQ+SLLVQPMLQALDAAFAHYDAD+++RS +SGER NG+
Sbjct: 540 MSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGF 598
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum lycopersicum]
Length = 599
Score = 852 bits (2200), Expect = 0.0
Identities = 433/599 (72%), Positives = 504/599 (84%), Gaps = 2/599 (0%)
Frame = -2
Query: 2008 MAD-KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE 1832
MAD KVVKRA YK+S K G+PGVL LT+ERF FMPNDP+ +T+ NVEF IKG +SSKE
Sbjct: 1 MADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60
Query: 1831 -SAKQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNE 1655
S+KQALLNLT+ QG N+ FEF++FPDRD C++ VA AIA GE GKA EKPA P +E
Sbjct: 61 CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-HDE 119
Query: 1654 QLSTAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVAL 1475
QLS EM RIKLLQENS+LQ LH++ VI GILSE EFWA RKKLLEQ+ ++PKQRVAL
Sbjct: 120 QLSATEMGRRIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSENKKPKQRVAL 179
Query: 1474 KNDMLSTKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSR 1295
KNDM S KPLSDGQ+NRVTFN T E+IHQIFAEKPAVRQAYLKFVP KM+EKEFWTKYSR
Sbjct: 180 KNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSR 239
Query: 1294 AEYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIH 1115
AEYLHST+N+V AVFLKQDDML +EARRKIRRVDPTLDMEADEGDDY+H
Sbjct: 240 AEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMH 299
Query: 1114 IQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRK 935
+ DHGL +G++K++LEPQYEP++RSFSQ LNQH AVVLQGR+IDVELGDTR+VAEA TR
Sbjct: 300 LPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRT 359
Query: 934 KQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALK 755
QAE A E+SD + +ER+++ SR+AEIEDLQ PRDPPVA LSIKDPRDYFDSQQANA+K
Sbjct: 360 NQAEQATEVSDENAYRERVKKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIK 419
Query: 754 ALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISS 575
ALGD +G + LK VS +A+ S+K+ ISEI + G+ EP+++ EVALKV N L+QNISS
Sbjct: 420 ALGDAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISS 479
Query: 574 TKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDA 395
TKY+LG+NP+ESVLD+LP+ TK ELLLHWTSIQELLKHFWSSYPITTKY KV RLKDA
Sbjct: 480 TKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDA 539
Query: 394 MSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
MS+IYPKLQE+KESVQSD+RHQ+SLLVQPMLQALDAAFAHYDAD+++RS RSGER NG+
Sbjct: 540 MSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGF 598
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 808 bits (2087), Expect = 0.0
Identities = 412/601 (68%), Positives = 489/601 (81%), Gaps = 4/601 (0%)
Frame = -2
Query: 2008 MADKVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE- 1832
M+ +V+KRA YK+S K SG+ GVL +T ++F+FMPNDP+SS RF+VEF IKG + SK
Sbjct: 1 MSGEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGG 60
Query: 1831 SAKQALLNLTED--QGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQN 1658
S K ALLNLT+D +G + FEFEN+PDR+ C+E V A+A EA KA E+ A L +
Sbjct: 61 SNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFD 120
Query: 1657 EQLSTAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVA 1478
EQLST EME RIKLL+E+S+LQKLHK FV+ G+L+EAEFWATRKKLL+ N +R KQRV
Sbjct: 121 EQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVG 180
Query: 1477 LKNDMLST-KPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKY 1301
K+ M+S KPL+DG++NRVTFN T EIIHQIFAEKPAV QA+L FVPNKMTEK+FW KY
Sbjct: 181 FKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKY 240
Query: 1300 SRAEYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDY 1121
RAEYLH TRN V AVFLK DD+LANEARRKIRRVDPTLDMEAD+GDDY
Sbjct: 241 CRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDY 300
Query: 1120 IHIQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALT 941
+H+ DHG+ R SK++++PQYE YRR+ SQ+LN+H AVVL+GR IDVEL DTRTVAEAL
Sbjct: 301 MHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALA 360
Query: 940 RKKQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANA 761
+ K+ E A E SD S+ +ERLER SRM EIEDLQAPRD P A L IKDPRDYFDSQQANA
Sbjct: 361 KSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANA 420
Query: 760 LKALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNI 581
LK LGDT +G K +KCS+ST +AYGS++ FISEIK+ G+ +P++ ++ALKVLNGLTQNI
Sbjct: 421 LKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNI 480
Query: 580 SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLK 401
SSTK++LG+NP ESVLDRLP ITKEELL HWTSIQELL+HFWSSYPITT YL TK +RLK
Sbjct: 481 SSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLK 540
Query: 400 DAMSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERING 221
DAMS+IYPKLQE+KESVQSD RHQ+SLLVQPMLQALDAAFAHYDAD ++RS RSGER NG
Sbjct: 541 DAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNG 600
Query: 220 Y 218
+
Sbjct: 601 F 601
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 742 bits (1916), Expect = 0.0
Identities = 389/617 (63%), Positives = 465/617 (75%), Gaps = 47/617 (7%)
Frame = -2
Query: 2008 MADKVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE- 1832
M+ +V+KRA YK+S K SG+ GVL +T ++F+FMPNDP+SS RF+VEF IKG + SK
Sbjct: 1 MSGEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGG 60
Query: 1831 SAKQALLNLTED--QGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQN 1658
S K ALLNLT+D +G + FEFEN+PDR+ C+E V A+A EA KA E+ A L +
Sbjct: 61 SNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQSAVKLFD 120
Query: 1657 EQLSTAEMEWRIKLLQEN------------------------------------------ 1604
EQLST EME RIKLL+E+
Sbjct: 121 EQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKVKWD 180
Query: 1603 -SDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDMLST-KPLSDGQS 1430
S+LQKLHK FV+ G+L+EAEFWATRKKLL+ N +R KQRV K+ M+S KPL+DG++
Sbjct: 181 CSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRT 240
Query: 1429 NRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEYLHSTRNVVXXXX 1250
NRVTFN T EIIHQIFAEKPAV QA+L FVPNKMTEK+FW KY RAEYLH TRN V
Sbjct: 241 NRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAA 300
Query: 1249 XXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRGDSKDVL 1070
AVFLK DD+LA+EARRKIRRVDPTLDMEAD+GDDY+H+ DHG+ R SK+++
Sbjct: 301 EAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEII 360
Query: 1069 EPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQAELAKELSDVSLE 890
+PQYE YRR+ SQ+LN+H AVVL+GR IDVEL DTRTVAEAL + K+ E A E SD S+
Sbjct: 361 DPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVT 420
Query: 889 KERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKALGDTGSGGKLLKCS 710
+ERLER SRM EIEDLQAPRD P A L IKDPRDYFDSQQANALK LGDT +G K +KCS
Sbjct: 421 RERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCS 480
Query: 709 VSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTKYNLGRNPNESVLD 530
+S+ +AYGS++ FISEIK+ G+ +P++ ++ALKVLNGLTQNISSTK++LG+NP ESVLD
Sbjct: 481 LSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLD 540
Query: 529 RLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMSKIYPKLQEMKESV 350
RLP ITKEELL HWTSIQELL+HFWSSYPITT YL TK +RLKDAMS+IYPKLQE+KESV
Sbjct: 541 RLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESV 600
Query: 349 QSDLRHQISLLVQPMLQ 299
QSD RHQ+SLLVQPMLQ
Sbjct: 601 QSDFRHQVSLLVQPMLQ 617
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 662 bits (1708), Expect = 0.0
Identities = 342/598 (57%), Positives = 439/598 (73%), Gaps = 8/598 (1%)
Frame = -2
Query: 1996 VVKRAMYKSSA-KGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKESAKQ 1820
V RA YK+S K G+ GVLT+ + FIF PNDPSSS + +V F IKG + SKE +KQ
Sbjct: 6 VTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSKQ 65
Query: 1819 ALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIAN------SGEAGKAVPEKPAAPLQN 1658
ALLNLT+D+G + FEF NF DRD C+++V + S ++ + VP +P N
Sbjct: 66 ALLNLTQDKGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTTQHDN 125
Query: 1657 EQLSTAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVA 1478
QLS AEME R+ LL+E+S+LQKLH+ VI G+L+E EFWATRK LL+ + KQR
Sbjct: 126 -QLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQRAG 184
Query: 1477 LKNDMLS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKY 1301
K+ ML+ +PL+DG++N+VTF+ T EIIHQIFAEKPAV QA+LKFVP+KM+E++FWTKY
Sbjct: 185 FKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKY 244
Query: 1300 SRAEYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDY 1121
RAEYLH T+N V AVFLK DD+LA+EARRKIRRVDPT+DM AD GDDY
Sbjct: 245 CRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDY 304
Query: 1120 IHIQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALT 941
H+ HG+ R SK+ ++ + E +R+ Q+LN+H AVVL+GR +DVELGDTRTVAEAL
Sbjct: 305 SHLPGHGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALA 364
Query: 940 RKKQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANA 761
R KQAE+A E SD + ++RLER S+M EIEDLQAPR P APL IKDPR+YFDSQ+ANA
Sbjct: 365 RSKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANA 424
Query: 760 LKALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNI 581
KA GDTGSG C +ST AY S++ I E+K+ G +P++ ++ALKVLN + Q +
Sbjct: 425 FKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQL 484
Query: 580 SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLK 401
SST LG+NP +VLD LP+ TKEELL HWTSIQELL+HFWSSYP+TT +L KV R+K
Sbjct: 485 SSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVK 544
Query: 400 DAMSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERI 227
DAM++IY KL E+KESVQS+ RHQ+SLLV+PMLQ LD AF HYDA++++RS ++ ++
Sbjct: 545 DAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKTMSKV 602
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 658 bits (1698), Expect = 0.0
Identities = 347/599 (57%), Positives = 443/599 (73%), Gaps = 3/599 (0%)
Frame = -2
Query: 2005 ADKVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-S 1829
A +V KRA YK S K G G L + ++ +FMP++ +S + VEF +I+G + +KE S
Sbjct: 4 AAQVTKRAKYKISVKDPGTTGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKEGS 63
Query: 1828 AKQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQL 1649
K L+NL QG ++ FEF+++ D C++ V+ + S E A EK A L +EQL
Sbjct: 64 NKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSAVKLPDEQL 123
Query: 1648 STAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKN 1469
S EM+ RIKLLQENS+LQKLH+ FV IL+EAEFWA RKKLL+++ +++ KQRV K+
Sbjct: 124 SEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPSKKSKQRVGFKS 183
Query: 1468 DMLST-KPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRA 1292
M+S +P +DG++N+VTF+ T EII QIFAEKPAV +A+L FVPNKMTE EFWTKY RA
Sbjct: 184 AMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRA 243
Query: 1291 EYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1112
EYL T+N AVFLK+DD+LANE R+KIRRVDPTLDMEADEGDDY H+
Sbjct: 244 EYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHL 303
Query: 1111 QDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGD-TRTVAEALTRK 935
DHG+ R +K+ E Q E YRR+ Q+LN+H AVVL+GR IDVE D TR +AEAL R
Sbjct: 304 PDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARS 363
Query: 934 KQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALK 755
K+ E +D + +ERL+RT R+AEIEDLQAP P+APLSIKD R+YFDSQQAN LK
Sbjct: 364 KRGN---EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLK 420
Query: 754 ALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISS 575
A D+ + +KCS+S +AYGS+++ ISEIK G+ +P++N EVALKV +GLT NISS
Sbjct: 421 ASRDSQAS---MKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISS 477
Query: 574 TKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDA 395
KY+LG+NP E+VLDRLP+ TKE+LL HW SIQELLKHFWSSYPITT YL +KV RLKDA
Sbjct: 478 IKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDA 537
Query: 394 MSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
+S IYP+L+EMKES+ +DLRHQ+SLLV+PM QALDAA HYDAD+++RS +SGE+ NGY
Sbjct: 538 LSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGY 596
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Citrus sinensis]
Length = 597
Score = 656 bits (1692), Expect = 0.0
Identities = 347/599 (57%), Positives = 441/599 (73%), Gaps = 3/599 (0%)
Frame = -2
Query: 2005 ADKVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-S 1829
A +V KRA YK S K G PG L + ++ +FMP++ +S + VEF +I+G + +KE S
Sbjct: 4 AAQVTKRAKYKISVKDPGTPGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKEGS 63
Query: 1828 AKQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQL 1649
K L+NL QG ++ FEF+++ D C++ V+ + S E A EK A L +EQL
Sbjct: 64 NKPPLINLANAQGGSYIFEFDSYADLHVCRDFVSKVLEKSKETPNAALEKSAIKLPDEQL 123
Query: 1648 STAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKN 1469
S EM+ RIKLLQENS+LQKLH+ FV IL+EAEFWA RKKLL+ + +++ KQRV K+
Sbjct: 124 SEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDPSKKSKQRVGFKS 183
Query: 1468 DMLST-KPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRA 1292
M+S +P +DG++N+VTF+ T EII QIFAEKPAV +A+L FVPNKMTE EFWTKY RA
Sbjct: 184 AMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRA 243
Query: 1291 EYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1112
EYL T+N AVFLK+DD+LANE R+KIRRVDPTLDMEADEGDDY H+
Sbjct: 244 EYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHL 303
Query: 1111 QDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGD-TRTVAEALTRK 935
DHG+ R +K+ E Q E YRR+ Q+LN+H AVVL+GR IDVE D TR +AEAL R
Sbjct: 304 PDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARS 363
Query: 934 KQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALK 755
K+ E +D + +ERL+RT R+AEIEDLQAP P+APLSIKD R+YFDSQQAN LK
Sbjct: 364 KRGN---EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLK 420
Query: 754 ALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISS 575
A D + +KCS+S +AY S+++ ISEIK G+ +P++N EVALKV +GLT NISS
Sbjct: 421 ASRDAQAS---MKCSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISS 477
Query: 574 TKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDA 395
KY+LG+NP E+VLDRLP+ TKE+LL HW SIQELLKHFWSSYPITT YL +KV RLKDA
Sbjct: 478 IKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDA 537
Query: 394 MSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
+S IYP+L+EMKES+ +DLRHQ+SLLV+PM QALDAA HYDAD+++RS +SGE+ NGY
Sbjct: 538 LSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGY 596
>gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 1
[Theobroma cacao]
Length = 646
Score = 650 bits (1677), Expect = 0.0
Identities = 347/644 (53%), Positives = 441/644 (68%), Gaps = 51/644 (7%)
Frame = -2
Query: 1996 VVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAKQ 1820
V KRA YK++ K G PG L +T E+ +F+P++P S+ + +VEF IKG + +KE S+K
Sbjct: 6 VTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAGKLDVEFRFIKGQKHTKEGSSKP 65
Query: 1819 ALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLSTA 1640
LNLT +Q + FEFEN+ D C++ V +A SGE V EKP +EQLS A
Sbjct: 66 PWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGE----VSEKPTVTYPDEQLSAA 121
Query: 1639 EMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDML 1460
EME RIKLL+E+S+LQKLHK FV+ G+L+EAEFWATRKKLL++ ++ KQR+ K+ M+
Sbjct: 122 EMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREANKKTKQRLGFKSAMI 181
Query: 1459 ST-KPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEYL 1283
S KP +DG++N+VTFN T EII QIFAEKPAV +A+L +VPNKM+E++FWTKY RAEYL
Sbjct: 182 SDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYL 241
Query: 1282 HSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDH 1103
HST+N V AVFLKQDD+LA+E+R KIRRVDPTLDM+ADEGDDY H+ DH
Sbjct: 242 HSTKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDH 301
Query: 1102 GLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQAE 923
G+ R SK+V E + E YRR+ SQ++N+H AVVL+GR +DVEL DTR+VAEAL R KQ
Sbjct: 302 GIFRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQES 361
Query: 922 LAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKALGD 743
K S +ERL+R SRM EIEDLQAP + P+APL IKDPRDYFDSQQ NAL+ GD
Sbjct: 362 STKGESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDSQQVNALRTSGD 421
Query: 742 TGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTKYN 563
+G + +KCS+S+ + YGS++E IS IKA G+ +P++ EVA +V + LTQ+IS+TKYN
Sbjct: 422 ELAGTEQIKCSLSSQEVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDALTQSISTTKYN 481
Query: 562 LGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMSKI 383
+G+NP ESVLDRLP KEELL HWTSI ELL+HFW+SYPITT YL TKV
Sbjct: 482 IGKNPQESVLDRLPKKIKEELLHHWTSILELLRHFWASYPITTSYLYTKVNAALVLTLLS 541
Query: 382 YPKLQ-------------------------------------------------EMKESV 350
Y KL+ E+K SV
Sbjct: 542 YQKLEAGKQTEGCHVTYLSTARVVLSNYPQVPFISSLLFYLLGSSDAKASYVWMEIKGSV 601
Query: 349 QSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
SDLRHQ+SLL++PM QALDAA HY+AD+++RS RSGER NGY
Sbjct: 602 PSDLRHQVSLLIRPMHQALDAAIQHYEADMQKRSARSGERPNGY 645
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 650 bits (1677), Expect = 0.0
Identities = 345/598 (57%), Positives = 432/598 (72%), Gaps = 4/598 (0%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAK 1823
+V KR YKSS K G G L + +F+P+DP S ++ V+ IK + +KE S K
Sbjct: 5 QVEKRVKYKSSVKDPGTSGFLRIKEAMLLFVPDDPKSDSKLKVQTQNIKSQKYTKEGSQK 64
Query: 1822 QALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLST 1643
A LNLT QGR+H FEF N+PD AC++ + A+A E P KPA P EQLS
Sbjct: 65 PAWLNLTNKQGRSHIFEFGNYPDMHACRDFITKALAKCEEE----PNKPAVPASTEQLSI 120
Query: 1642 AEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDM 1463
E+E R KLL+ENS+LQ+LHK FV +L+E EFWATRKKLL ++ R+ KQ++ LK+ M
Sbjct: 121 RELELRFKLLKENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMM 180
Query: 1462 LS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEY 1286
+S KP +DG++NRVTFN T EII QIFAEKPAVRQA++ +VP+KMTEK+FWTKY RAEY
Sbjct: 181 VSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKYFRAEY 240
Query: 1285 LHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1106
L+ST+N AVFLK D++LA E R+KIRRVDPTLDMEADEGDDY H+ D
Sbjct: 241 LYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYTHLMD 300
Query: 1105 HGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQA 926
HG+ R ++DV+EPQ E ++RS Q+LN+H AVVL+GR IDV+ DTR VAEALTR KQ
Sbjct: 301 HGIQRDGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTRVKQV 360
Query: 925 ELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKALG 746
A + +ERLER SR+A +EDLQAP++ P+APLSIKDPRDYF+SQQ N L A
Sbjct: 361 SKADGETGKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNA-- 418
Query: 745 DTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTKY 566
G K LK +V H+A+G +KE I EI+A G+ +PL+ EV+ +V + LT+ IS+ K
Sbjct: 419 --PRGTKGLKRNV--HEAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTISTAKN 474
Query: 565 NLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMSK 386
+G+NP ES LDRLP TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS
Sbjct: 475 IIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSN 534
Query: 385 IYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRS--GERINGY 218
Y KL+ MKESVQSDLRHQISLLV+PM QALDAAF HY+AD++RR+ +S GER NGY
Sbjct: 535 TYSKLEAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNGY 592
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 644 bits (1662), Expect = 0.0
Identities = 342/597 (57%), Positives = 429/597 (71%), Gaps = 3/597 (0%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAK 1823
+V KR YKSS K G PG L + +F+PNDP S ++ V IK +++KE S K
Sbjct: 5 QVEKRVKYKSSVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKNTKEESNK 64
Query: 1822 QALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLST 1643
LNLT G++H FEFEN+PD AC++ + A+A E P K +EQLS
Sbjct: 65 PPWLNLTNKLGKSHIFEFENYPDMHACRDFITKALAKCEEE----PNKSVVSTSSEQLSI 120
Query: 1642 AEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDM 1463
E+E R KLL+ENS+LQ+LHK FV +L+E EFWATRKKLL ++ R+ KQ+V LK+ M
Sbjct: 121 KELELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQVGLKSMM 180
Query: 1462 LS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEY 1286
+S KP +DG++NRVTFN T EII QIFAEKPAVRQA++ +VP+KMTEK+FWTKY RAEY
Sbjct: 181 VSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEY 240
Query: 1285 LHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1106
L+ST+N AVFLK D++LA E R+KIRRVDPTLDMEAD+GDDY H+ D
Sbjct: 241 LYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMD 300
Query: 1105 HGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQA 926
HG+ R + DV+EPQ + +RRS Q+LN+H AVVL+GR IDVE DTR VAEALTR KQ
Sbjct: 301 HGIQRDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQV 360
Query: 925 ELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKALG 746
A + ERLER SR+A +EDLQAP++ P+APLSIKDPRDYF+SQQ N L
Sbjct: 361 SKADGETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL---- 416
Query: 745 DTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTKY 566
+ G K LK +V H+AYG +KE I EI+A+G+ +PL+ EV+ +V + LT+ IS+ K
Sbjct: 417 NVPRGAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKN 474
Query: 565 NLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMSK 386
+G+NP ES LDRLP TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS
Sbjct: 475 IIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSN 534
Query: 385 IYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRS-GERINGY 218
Y KL+ MKESVQSDLRHQ+SLLV+PM QALDAAF HY+AD++RR+ +S GER NGY
Sbjct: 535 TYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNGY 591
>gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 642 bits (1657), Expect = 0.0
Identities = 348/597 (58%), Positives = 425/597 (71%), Gaps = 4/597 (0%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKG--FRSSKESA 1826
+VVKRA YKS K G PGVLT+T +F+F PNDPSS+ + +VEF I G S E+A
Sbjct: 5 QVVKRASYKSKIKDPGTPGVLTMTENKFVFRPNDPSSAAKLDVEFKHITGNALAKSGEAA 64
Query: 1825 KQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLS 1646
K A + A A K EK L +EQLS
Sbjct: 65 K-------------------------------ASSAAKPTSAAKTTSEKSGVTLPDEQLS 93
Query: 1645 TAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKND 1466
TAEM+ R+KLLQE+S+LQKLH FVI G+L+E+EFWATRKKLL+ + + KQRV ++
Sbjct: 94 TAEMQLRMKLLQEDSELQKLHMQFVISGVLTESEFWATRKKLLDGDSRTKSKQRVGFRSS 153
Query: 1465 M-LSTKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAE 1289
M L TKP++DG+ N+VTFN T EI +QIFA KPAV QA+L VP+KMTEK+FWTKY RAE
Sbjct: 154 MILDTKPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAE 213
Query: 1288 YLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQ 1109
YLHSTRN V A+FLK+D +LA+EARRKIRRVDPTLDMEAD+GDDY H+
Sbjct: 214 YLHSTRNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLP 273
Query: 1108 DHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQ 929
DHG+ R SKDV E Q E YRR+ SQ+LN+ GAVVLQGR +DV+L D RTVAEAL + ++
Sbjct: 274 DHGIFRDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRR 333
Query: 928 AELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKAL 749
SD S E+ERL+R +RM EIEDLQ D PVA L IKDPRDYFD+QQ NALK L
Sbjct: 334 E------SDESAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNALKTL 387
Query: 748 GDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTK 569
D+ +G + KCS++T +AYGS++E IS+IK+ G+ + E+A+ VLNGLTQNISSTK
Sbjct: 388 DDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTK 447
Query: 568 YNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMS 389
Y LG+NP +SVLD LPN TKEELL HW SIQELL+HFWSSYPITT YLSTKV RLKDAMS
Sbjct: 448 YQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMS 507
Query: 388 KIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRS-GERING 221
+IY +L+E+K QSD RHQ+SLLV+PM QALDAAF H+DAD+++R+ RS GE NG
Sbjct: 508 QIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNG 561
>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
gi|557089185|gb|ESQ29893.1| hypothetical protein
EUTSA_v10011333mg [Eutrema salsugineum]
Length = 597
Score = 640 bits (1652), Expect = 0.0
Identities = 340/600 (56%), Positives = 425/600 (70%), Gaps = 7/600 (1%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAK 1823
+V KR YKSS K G PG L LT +F+PNDP S ++ V+ IK + +KE S K
Sbjct: 6 QVEKRVRYKSSVKDPGTPGFLRLTEAMLLFVPNDPKSDSKLKVQTLNIKSQKYTKEGSNK 65
Query: 1822 QALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLST 1643
LNLT QG++H FEFEN+ D AC++ + A+A E VP+K A EQLS
Sbjct: 66 PPWLNLTNKQGKSHIFEFENYSDMHACRDFITKALAKCEE----VPKKSAVSTSTEQLSI 121
Query: 1642 AEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDM 1463
AE+E R K+L+ENS+LQ+LHK FV +L+E EFWATRKKLL Q T + KQ+V LK+ M
Sbjct: 122 AELELRFKVLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGQVSTGKSKQQVGLKSMM 181
Query: 1462 LS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEY 1286
+S KP +DG++NRVTFN TSEII QIFAEKPAVRQA++ +VP+KMTEK+FWTKY RAEY
Sbjct: 182 VSGIKPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEY 241
Query: 1285 LHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1106
L+ST+N AVFLK D++LA E R+KIRRVDPTLDMEAD+GDDY H+ D
Sbjct: 242 LYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYSHLMD 301
Query: 1105 HGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQA 926
HG+ R +KDV+E Q + +RRS Q+LN+H AVVL+GR IDVE DTR VAEALTR KQ
Sbjct: 302 HGIQRDGTKDVVESQNDQFRRSLLQDLNRHSAVVLEGRSIDVESEDTRVVAEALTRAKQV 361
Query: 925 ELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKALG 746
A + ++RLER SR AE+EDLQAP++ P+APLSIKDPRDYF+SQQ N L
Sbjct: 362 SKADGETTKDANQDRLERMSRTAEMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNEPR 421
Query: 745 DTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTKY 566
G+ + + H+AYG +KE I EI+ G+ PL+ SEV+ +V + LTQ IS+ K
Sbjct: 422 GAGALNR------NVHEAYGLLKESILEIRTKGLSYPLIKSEVSFEVFSSLTQTISTAKN 475
Query: 565 NLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMSK 386
+G+NP ES LDRLP TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS
Sbjct: 476 IIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSN 535
Query: 385 IYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDR-----SGERING 221
Y +L MK+SVQSDLRHQ+SLLV+PM QALDAAF HY+ D++RR+ + S ER NG
Sbjct: 536 TYSQLDAMKQSVQSDLRHQVSLLVRPMQQALDAAFQHYETDLQRRTAKSVGGSSSERPNG 595
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 637 bits (1644), Expect = e-180
Identities = 335/569 (58%), Positives = 427/569 (75%), Gaps = 3/569 (0%)
Frame = -2
Query: 1915 IFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAKQALLNLTEDQGRNHFFEFENFPDRDACK 1739
+FMP++ +S + VEF +I+G + +KE S K L+NL QG ++ FEF+++ D C+
Sbjct: 1 MFMPDNRNSGAKLVVEFKSIQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCR 60
Query: 1738 EIVAIAIANSGEAGKAVPEKPAAPLQNEQLSTAEMEWRIKLLQENSDLQKLHKDFVIQGI 1559
+ V+ + S E A EK A L +EQLS EM+ RIKLLQENS+LQKLH+ FV I
Sbjct: 61 DFVSKVLEKSKETPNAALEKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNI 120
Query: 1558 LSEAEFWATRKKLLEQNGTRRPKQRVALKNDMLST-KPLSDGQSNRVTFNFTSEIIHQIF 1382
L+EAEFWA RKKLL+++ +++ KQRV K+ M+S +P +DG++N+VTF+ T EII QIF
Sbjct: 121 LTEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIF 180
Query: 1381 AEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEYLHSTRNVVXXXXXXXXXXXXAVFLKQDD 1202
AEKPAV +A+L FVPNKMTE EFWTKY RAEYL T+N AVFLK+DD
Sbjct: 181 AEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDD 240
Query: 1201 MLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRGDSKDVLEPQYEPYRRSFSQNLN 1022
+LANE R+KIRRVDPTLDMEADEGDDY H+ DHG+ R +K+ E Q E YRR+ Q+LN
Sbjct: 241 ILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQSEHYRRTLLQDLN 300
Query: 1021 QHGAVVLQGRIIDVELGD-TRTVAEALTRKKQAELAKELSDVSLEKERLERTSRMAEIED 845
+H AVVL+GR IDVE D TR +AEAL R K+ E +D + +ERL+RT R+AEIED
Sbjct: 301 RHAAVVLEGRTIDVEREDSTRALAEALARSKRGN---EGADNNANEERLDRTPRVAEIED 357
Query: 844 LQAPRDPPVAPLSIKDPRDYFDSQQANALKALGDTGSGGKLLKCSVSTHDAYGSIKEFIS 665
LQAP P+APLSIKD R+YFDSQQAN LKA D+ + +KCS+S +AYGS+++ IS
Sbjct: 358 LQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQAS---MKCSLSRQEAYGSVRDAIS 414
Query: 664 EIKASGIHEPLMNSEVALKVLNGLTQNISSTKYNLGRNPNESVLDRLPNITKEELLLHWT 485
EIK G+ +P++N EVALKV +GLT NISS KY+LG+NP E+VLDRLP+ TKE+LL HW
Sbjct: 415 EIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWM 474
Query: 484 SIQELLKHFWSSYPITTKYLSTKVARLKDAMSKIYPKLQEMKESVQSDLRHQISLLVQPM 305
SIQELLKHFWSSYPITT YL +KV RLKDA+S IYP+L+EMKES+ +DLRHQ+SLLV+PM
Sbjct: 475 SIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPM 534
Query: 304 LQALDAAFAHYDADVRRRSDRSGERINGY 218
QALDAA HYDAD+++RS +SGE+ NGY
Sbjct: 535 QQALDAAIQHYDADLQKRSAKSGEKPNGY 563
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis thaliana]
Length = 591
Score = 637 bits (1642), Expect = e-180
Identities = 335/596 (56%), Positives = 425/596 (71%), Gaps = 2/596 (0%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAK 1823
++ K YKS+ K G PG L + +F+PNDP S ++ V IK + +KE S K
Sbjct: 5 QIEKLVKYKSTVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKYTKEGSNK 64
Query: 1822 QALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLST 1643
LNLT Q ++H FEFEN+PD AC++ + A+A + P K +EQLS
Sbjct: 65 PPWLNLTNKQAKSHIFEFENYPDMHACRDFITKALAKC----ELEPNKSVVSTSSEQLSI 120
Query: 1642 AEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDM 1463
E+E R KLL+ENS+LQ+LHK FV +L+E EFWATRKKLL ++ R+ KQ++ LK+ M
Sbjct: 121 KELELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMM 180
Query: 1462 LS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEY 1286
+S KP +DG++NRVTFN T EII QIFAEKPAVRQA++ +VP+KMTEK+FWTKY RAEY
Sbjct: 181 VSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEY 240
Query: 1285 LHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1106
L+ST+N AVFLK D++LA E R KIRRVDPTLDMEAD+GDDY H+ D
Sbjct: 241 LYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMD 300
Query: 1105 HGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKKQA 926
HG+ R + DV+EPQ + ++RS Q+LN+H AVVL+GR IDVE DTR VAEALTR KQ
Sbjct: 301 HGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQV 360
Query: 925 ELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKALG 746
A + +ERLER SR+A +EDLQAP++ P+APLSIKDPRDYF+SQQ N L
Sbjct: 361 SKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL---- 416
Query: 745 DTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISSTKY 566
+ G K LK +V H+AYG +KE I EI+A+G+ +PL+ EV+ +V + LT+ I++ K
Sbjct: 417 NVPRGAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKN 474
Query: 565 NLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAMSK 386
G+NP ES LDRLP TK+E+L HWTSIQELLKHFWSSYPITT YL TKV +LKDAMS
Sbjct: 475 INGKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSN 534
Query: 385 IYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
Y KL+ MKESVQSDLRHQ+SLLV+PM QALDAAF HY+ D++RR+ +SGER NGY
Sbjct: 535 TYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGY 590
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 630 bits (1626), Expect = e-178
Identities = 336/601 (55%), Positives = 436/601 (72%), Gaps = 7/601 (1%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKESAKQ 1820
+V KR +KSS K G PG L LT ER +F PN P+S+T+ N+EF +K + +KE + +
Sbjct: 5 QVSKRVKFKSSVKDPGTPGRLYLTLERLMFKPNSPNSATKLNMEFRFVKNHKYTKEGSNK 64
Query: 1819 A-LLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLST 1643
A +LNLT QG ++ FEFE++ D CKE V A++ +GE K + + + +EQ ST
Sbjct: 65 APMLNLTSSQGVSYIFEFESYDDLHVCKECVGKALSKTGETPKPID---TSEVPSEQPST 121
Query: 1642 AEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDM 1463
E+ R+ +LQENS+LQ LHK FV GIL+EAEFWATRKKLL N +++ KQR LK+ +
Sbjct: 122 EELLLRMNMLQENSELQNLHKRFVSDGILTEAEFWATRKKLLGGNFSKKSKQRTGLKSFV 181
Query: 1462 LS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEY 1286
LS TKP +DG++N+VTF T EI+ ++FAEKPAV +AYL VP KM+E++FW+KY RAEY
Sbjct: 182 LSDTKPSTDGRTNKVTFTLTPEIVREVFAEKPAVHRAYLDLVPKKMSERDFWSKYCRAEY 241
Query: 1285 LHSTRNV---VXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIH 1115
L +N A+FLK DD+LA+E RRKIR VDPTL+MEADEGDDY H
Sbjct: 242 LQHAKNANAAAAAAAEAAEDEELALFLKPDDILASETRRKIRCVDPTLNMEADEGDDYTH 301
Query: 1114 IQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVE-LGDTRTVAEALTR 938
+ DHG+ R SK++ E Q+E Y R+ SQ LN+H AVVLQG ID E L DT+TVAEAL +
Sbjct: 302 LPDHGIVRDGSKEITESQHELYIRTLSQELNRHAAVVLQGTPIDEEQLKDTQTVAEALKQ 361
Query: 937 KKQAELAK-ELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANA 761
KQ + A E +D++ ++RL R S+M EI+DLQA D P+APLSIKDPRDYFDSQQA A
Sbjct: 362 SKQGQNASNEETDMNANQDRLSRISKMMEIDDLQASSDLPLAPLSIKDPRDYFDSQQATA 421
Query: 760 LKALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNI 581
LK DT G +K +S ++Y S+++ IS IK +G+ +P++ EVA+KVL+ LT NI
Sbjct: 422 LKNSRDTSIGTDPVKRILSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNI 481
Query: 580 SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLK 401
SSTKY+ G+N SVLD LPN KEELL HWTS+QELLKH+WSSYPITT YL TKV+RLK
Sbjct: 482 SSTKYDTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLK 541
Query: 400 DAMSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERING 221
DAMSKI +LQE+KESVQSDLRHQ++LL++PM QAL+AA HYDA++++RS RSG+R NG
Sbjct: 542 DAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNG 601
Query: 220 Y 218
Y
Sbjct: 602 Y 602
>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Cicer arietinum]
Length = 586
Score = 627 bits (1616), Expect = e-177
Identities = 330/598 (55%), Positives = 429/598 (71%), Gaps = 2/598 (0%)
Frame = -2
Query: 2005 ADKVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-S 1829
+ +VVKRA YK++ K G PGVL LT+E+ +F PNDP+S+ R V+F IK + +KE S
Sbjct: 4 SQQVVKRAKYKTTVKDPGTPGVLKLTQEKLVFKPNDPTSNNRVEVDFRLIKNHKHTKEGS 63
Query: 1828 AKQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQL 1649
K LNL QG ++ FE ENF D C+E+V IA++ E K V + EQL
Sbjct: 64 NKPPWLNLGHSQG-SYIFELENFSDLHVCRELVGIALSKHVEPPKVVSD--------EQL 114
Query: 1648 STAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKN 1469
S AEM RIKLLQE+S LQKLHKD V G L+E+EFWAT+KKLL+Q+ +R+ KQR+ KN
Sbjct: 115 SPAEMTLRIKLLQEDSKLQKLHKDLVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKN 174
Query: 1468 DML-STKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRA 1292
++ TKP SDG+ N+V F T EI +QIFA KPAV QA+L FVP+KM+E +FW KY +A
Sbjct: 175 SLIFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKA 234
Query: 1291 EYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1112
EY+HST+N + AVFLK D++L NEAR+K+RRVDPTLDMEAD+GDDY H+
Sbjct: 235 EYIHSTKNTIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHL 294
Query: 1111 QDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKK 932
DHG+ R SK+ E Q YRR+ Q+LN+ VVL+G+ +D+++ RTVAE L R+K
Sbjct: 295 PDHGIFRDGSKETAEAQNTFYRRTLLQDLNRQSEVVLEGKTLDMDMEHPRTVAEVLARRK 354
Query: 931 QAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKA 752
Q SD +E+ER R S+M +IEDLQA D APL IKDPRDYFDSQQ NALK+
Sbjct: 355 QE------SDGVIEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNALKS 408
Query: 751 LGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISST 572
L D+ +G + ++C++ + +AYGS++E IS+IKA G+ +PL++ EVA KVLNGLT+NISST
Sbjct: 409 LDDSLAGKEQIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISST 468
Query: 571 KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAM 392
K +LG++ ESVLD LPN TKE+LL HW QELL+HFWSSYP+TT+ L K R+KDA+
Sbjct: 469 KSHLGKSSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAI 528
Query: 391 SKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
S+IY KL+E+K S +SDLRHQ+SL+V PM QALDAA HYDADVR+R+ R G + NGY
Sbjct: 529 SQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNAR-GTKPNGY 585
>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
gi|222856470|gb|EEE94017.1| transcription factor-related
family protein [Populus trichocarpa]
Length = 586
Score = 625 bits (1612), Expect = e-176
Identities = 332/590 (56%), Positives = 427/590 (72%), Gaps = 6/590 (1%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKESAKQ 1820
+V KR YKSS K +G PG L LT ER +F PN P+S+T+ N+EF IK R +KE + +
Sbjct: 5 QVSKRVKYKSSVKDAGTPGRLFLTLERLMFKPNSPNSATKLNMEFRFIKNHRYTKEGSNK 64
Query: 1819 A-LLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQLST 1643
A +LNLT QG N+ FEFE++ D CKE V A++ +GE K V + + +EQ ST
Sbjct: 65 APMLNLTSSQGMNYIFEFESYDDLHVCKECVGKALSKTGETPKPVD---TSEVPSEQPST 121
Query: 1642 AEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKNDM 1463
E+ R+ +L+ENS+LQKLHK FV G+L+EAEFWATRKKLL N +++ KQR LK+ M
Sbjct: 122 EELLSRMNMLRENSELQKLHKRFVSDGVLTEAEFWATRKKLLGGNTSKKSKQRTGLKSVM 181
Query: 1462 LS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRAEY 1286
LS TKP +DG++N+VTF T EI+ +IFAEKPAV QAYL VP KM+E++FW+KY RAEY
Sbjct: 182 LSDTKPSTDGRTNKVTFTLTPEIVREIFAEKPAVHQAYLTLVPKKMSERDFWSKYCRAEY 241
Query: 1285 LHSTRNV---VXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIH 1115
L +N A+FLK D++LA+E R KIR VDPTLDMEADEGDDY H
Sbjct: 242 LQHAKNANAAAAAAAEAAEDEELALFLKPDNILASETRWKIRGVDPTLDMEADEGDDYTH 301
Query: 1114 IQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVE-LGDTRTVAEALTR 938
+ DHG+ R SK++ E Q+E RR+ SQ+LN+H AVVLQG ID E L DT+TVAEAL R
Sbjct: 302 LPDHGIVRDGSKEITELQHELCRRTLSQDLNRHAAVVLQGTPIDEEQLKDTQTVAEALER 361
Query: 937 KKQAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANAL 758
KQ +D++ ++RL R +M EI+DLQA D P+APLSIKDPRDYFDSQQA+AL
Sbjct: 362 SKQE------ADINANQDRLSRNLKMMEIDDLQASIDLPLAPLSIKDPRDYFDSQQASAL 415
Query: 757 KALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNIS 578
K DT G ++C++S ++Y S+++ IS IK +G+ +P++ EVA KVL LT NIS
Sbjct: 416 KTSRDTSIGNDPVRCTLSVEESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLVLTHNIS 475
Query: 577 STKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKD 398
STKY+LG+NP SVLD LPN KEEL+ HWTS+QELL+H+WSSYPITT YL KV+RLKD
Sbjct: 476 STKYDLGKNPGLSVLDTLPNSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNKVSRLKD 535
Query: 397 AMSKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRS 248
AMSKI +LQE+KESVQSDLRHQ++LL++PM QAL+ A HYDAD+++RS
Sbjct: 536 AMSKIDSQLQELKESVQSDLRHQVTLLIRPMQQALEVAMQHYDADMQKRS 585
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 623 bits (1606), Expect = e-175
Identities = 333/602 (55%), Positives = 434/602 (72%), Gaps = 5/602 (0%)
Frame = -2
Query: 2008 MADK-VVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE 1832
MA K V KR YK+S K G PG L LT E+ F PN+P+S+++ +++F + +++KE
Sbjct: 1 MASKQVTKRVKYKTSLKDPGTPGRLLLTMEKLAFRPNNPNSASKLDMDFKYVTNHKNTKE 60
Query: 1831 SAKQALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANSGEAGKAVPEKPAAPLQNEQ 1652
+ +A+LNLT +QG ++ FEFEN D CKEIV A++ G+ K P+ P P ++Q
Sbjct: 61 GSAKAMLNLTSNQGVSYIFEFENHDDLRICKEIVGKALSKLGDTPKP-PDAPEVP--SDQ 117
Query: 1651 LSTAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALK 1472
ST E+ R+ LL+EN +LQKLHK FV +L+++EFWATRKKLL +R+ KQRV LK
Sbjct: 118 PSTEELLLRMNLLRENLELQKLHKQFVSDRVLTDSEFWATRKKLLNGEFSRKSKQRVGLK 177
Query: 1471 NDMLS-TKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSR 1295
+ ML+ +KPL DGQ+N+VTFN T EI+ +IFAEKPAV QAYL VPNKM+E++FWTKY R
Sbjct: 178 SVMLADSKPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYCR 237
Query: 1294 AEYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIH 1115
AEYL +RN+ A+FLK DD+LA+E R+KIR VDPTLDMEAD+GDDY H
Sbjct: 238 AEYLQRSRNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTH 297
Query: 1114 IQDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVE-LGDTRTVAEALTR 938
+ DHG+ R SKDV+E Q+EPYRR+ Q+LN+H AVVL+G ID E L DT+ VA+AL R
Sbjct: 298 LPDHGIVRDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALAR 357
Query: 937 KKQA-ELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANA 761
K+ + +D + +ER R S+M EIEDLQ D +APL IKDPRDYFDSQQA+A
Sbjct: 358 SKRGIKTINREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQASA 417
Query: 760 LKALGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNI 581
LK D SG + +CS+S+ +AY S+++ I++ KA G+++P++ E+A KVL+ LT NI
Sbjct: 418 LKNSRDIPSGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNI 477
Query: 580 SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLK 401
SSTKY+LG+N ESVLDRLPN KEELL HW SI+ELL+H+WSSYPITT YL KV+RLK
Sbjct: 478 SSTKYHLGKNSRESVLDRLPNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRLK 537
Query: 400 DAMSKIYPKLQEMKESVQSDLR-HQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERIN 224
DAMSKI +LQEMKESVQSDL H SL + P AL+AA HYDAD+++RS +S ER N
Sbjct: 538 DAMSKIDSQLQEMKESVQSDLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERPN 594
Query: 223 GY 218
GY
Sbjct: 595 GY 596
>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-3-like isoform X1 [Glycine max]
gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
polymerase II transcription factor B subunit 1-3-like
isoform X2 [Glycine max]
Length = 587
Score = 622 bits (1605), Expect = e-175
Identities = 326/598 (54%), Positives = 434/598 (72%), Gaps = 4/598 (0%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKESAKQ 1820
+VVKRA YK++ K G PGVL LT++RF+F PNDP+S T+ +VEF I+G + +KE +KQ
Sbjct: 5 QVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKEGSKQ 64
Query: 1819 A-LLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIANS--GEAGKAVPEKPAAPLQNEQL 1649
LLNL QG + FE E+F D C+E+V A+ + GEA K + E EQL
Sbjct: 65 PPLLNLIRAQG-SCIFELESFADLHVCRELVGFALNRNVPGEATKVISE--------EQL 115
Query: 1648 STAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKN 1469
S AEM RIKLLQE+S LQ+LHK+ V G L+E+EFWAT+KKLL+Q+ +R+ KQR+ KN
Sbjct: 116 SPAEMALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKN 175
Query: 1468 DML-STKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRA 1292
++ TKP+SDG+ N+V F T EI +QIFA KPAV QA+L FVP+KM E +FW KY +A
Sbjct: 176 SLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKA 235
Query: 1291 EYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1112
EYLHST+N V AVFLK D++L EAR+K+RRVDPTLDMEAD+GDDY H+
Sbjct: 236 EYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHL 295
Query: 1111 QDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKK 932
DHG+ R SKD+ E Q Y+R+ Q+LN+ GAVVL+G+ +D+E+ RTVAE L R+K
Sbjct: 296 PDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRK 355
Query: 931 QAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKA 752
Q D +++ER R S+M IEDLQA + P APL IKDPRDYFDSQQANA+K
Sbjct: 356 QE------CDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKT 409
Query: 751 LGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISST 572
L D+ +G + +KCS+ + +AY S++ IS+IK +G+ +PL + +VALKVLNGLT+NI+ST
Sbjct: 410 LDDSQAGMEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITST 469
Query: 571 KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAM 392
KY+LG++ ESVLD LPN TKE+LL HW QELL+HFWSSYP++T+ L +K RLKD++
Sbjct: 470 KYHLGKSSQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSI 529
Query: 391 SKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
S+IY KL+++K S +SDLRH +SL+V PM QAL+AA HY+AD+R+R+ R G++ NGY
Sbjct: 530 SQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-GQKPNGY 586
>gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
Length = 588
Score = 617 bits (1591), Expect = e-174
Identities = 324/598 (54%), Positives = 429/598 (71%), Gaps = 4/598 (0%)
Frame = -2
Query: 1999 KVVKRAMYKSSAKGSGIPGVLTLTRERFIFMPNDPSSSTRFNVEFSTIKGFRSSKE-SAK 1823
+VVKR YK++ K G GVL LT+E+F+F PNDP+S+ + +VEF IK + +KE S K
Sbjct: 5 QVVKRVKYKATVKDPGTSGVLKLTQEKFVFKPNDPTSNNKLDVEFRFIKSHKHTKEGSGK 64
Query: 1822 QALLNLTEDQGRNHFFEFENFPDRDACKEIVAIAIAN--SGEAGKAVPEKPAAPLQNEQL 1649
LNLT QG ++ FE ++F D C+E+V IA++ GEA K + E EQL
Sbjct: 65 PPWLNLTHAQG-SYIFELDSFADLHVCRELVGIALSKHVQGEATKVISE--------EQL 115
Query: 1648 STAEMEWRIKLLQENSDLQKLHKDFVIQGILSEAEFWATRKKLLEQNGTRRPKQRVALKN 1469
S+AEM RIKLLQE+S LQ+LHK+ V G L+E+EFWAT+KKLL+Q+ +R+ KQR+ KN
Sbjct: 116 SSAEMTLRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKN 175
Query: 1468 DML-STKPLSDGQSNRVTFNFTSEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSRA 1292
++ TKP+SDG+ N+V F T EI +QIF KPAV QA+L FVP+KM E +FW KY +A
Sbjct: 176 SLIFDTKPMSDGRINQVKFQLTPEIKYQIFTLKPAVHQAFLNFVPSKMNEVDFWNKYFKA 235
Query: 1291 EYLHSTRNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1112
EYLHST+N V AVFLK D++L EAR+K+RRVDPTLDMEAD+GDDY H+
Sbjct: 236 EYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHL 295
Query: 1111 QDHGLSRGDSKDVLEPQYEPYRRSFSQNLNQHGAVVLQGRIIDVELGDTRTVAEALTRKK 932
DHG+ R SK++ E Q Y+R+ Q+LN+ GAVVL+G+ +D+E+ + RTVAE L R+K
Sbjct: 296 PDHGIFRDGSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMENPRTVAEILARRK 355
Query: 931 QAELAKELSDVSLEKERLERTSRMAEIEDLQAPRDPPVAPLSIKDPRDYFDSQQANALKA 752
Q E +V ++ER R S+M IEDLQ+ D APL IKDPRDYFD QQANA+K
Sbjct: 356 Q-----ESDEVVGDEERRNRISKMTPIEDLQSQDDHRYAPLCIKDPRDYFDFQQANAVKT 410
Query: 751 LGDTGSGGKLLKCSVSTHDAYGSIKEFISEIKASGIHEPLMNSEVALKVLNGLTQNISST 572
L D+ G + + CS+ + +AYGS++ IS+I+ +G+ +PL + EVALKVL+GLT+NISS+
Sbjct: 411 LDDSQPGMEQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVLHGLTKNISSS 470
Query: 571 KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLKHFWSSYPITTKYLSTKVARLKDAM 392
KY+LG+ ESVLD LPN TKE+LL HW QELL+H+WSSYP+TT+ L K RLKD++
Sbjct: 471 KYHLGKTSQESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLVNKTRRLKDSI 530
Query: 391 SKIYPKLQEMKESVQSDLRHQISLLVQPMLQALDAAFAHYDADVRRRSDRSGERINGY 218
S+IY KL+E+K S QSDLRHQ+SL+V PM QALDAA HYDAD+R+R+ R G + NGY
Sbjct: 531 SQIYSKLEEIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNAR-GSKSNGY 587