BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00004653
         (239 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866078.1| F-box family protein [Arabidopsis lyrata sub...    60   3e-07
ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana] ...    59   5e-07
dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana]         59   5e-07
ref|XP_006355340.1| PREDICTED: F-box protein At2g26160-like isof...    57   3e-06

>ref|XP_002866078.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311913|gb|EFH42337.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = -2

Query: 202 FVTKAVLSRNPRDDEKGEWVIVAIYGQFRILGFAREGDKVWTDIPCPSRCYEDVVFYEGK 23
           FV KAV S +  DDE   WV++ IY   R L F R GDK WTD+   +   +D+VF  G 
Sbjct: 151 FVKKAVSSTSLLDDE---WVVLVIYNTDRKLAFCRRGDKQWTDLESVASAVDDIVFCNGV 207

Query: 22  FYAVD 8
           F+A+D
Sbjct: 208 FFAID 212


>ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana]
           gi|142991284|sp|Q9FLP7.2|FB294_ARATH RecName:
           Full=Putative F-box protein At5g55150
           gi|332009209|gb|AED96592.1| uncharacterized protein
           AT5G55150 [Arabidopsis thaliana]
          Length = 360

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -2

Query: 202 FVTKAVLSRNPRDDEKGEWVIVAIYGQFRILGFAREGDKVWTDIPCPSRCYEDVVFYEGK 23
           F+ KAV S +  DDE   WV++ IY   R L F R GDK WTD+   +   +D+VF  G 
Sbjct: 139 FIKKAVSSTSLLDDE---WVVLVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFCNGV 195

Query: 22  FYAVD 8
           F+A+D
Sbjct: 196 FFAID 200


>dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana]
          Length = 340

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -2

Query: 202 FVTKAVLSRNPRDDEKGEWVIVAIYGQFRILGFAREGDKVWTDIPCPSRCYEDVVFYEGK 23
           F+ KAV S +  DDE   WV++ IY   R L F R GDK WTD+   +   +D+VF  G 
Sbjct: 119 FIKKAVSSTSLLDDE---WVVLVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFCNGV 175

Query: 22  FYAVD 8
           F+A+D
Sbjct: 176 FFAID 180


>ref|XP_006355340.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Solanum
           tuberosum] gi|565377770|ref|XP_006355341.1| PREDICTED:
           F-box protein At2g26160-like isoform X2 [Solanum
           tuberosum] gi|565377772|ref|XP_006355342.1| PREDICTED:
           F-box protein At2g26160-like isoform X3 [Solanum
           tuberosum] gi|565377774|ref|XP_006355343.1| PREDICTED:
           F-box protein At2g26160-like isoform X4 [Solanum
           tuberosum]
          Length = 395

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = -2

Query: 232 EFKPEGVAHMFVTKAVLSRNPRDDEKGEWVIVAIYGQFRILGFAREGDKVWTDIPCPSRC 53
           EF    +   FV KAVLS NP   +  ++V++ I G F+ L F R GD +WT I  P   
Sbjct: 136 EFYQTRIPWNFVKKAVLSANPSHTD--DYVLMVIEGSFKFLSFWRPGDFLWTRITKPIHF 193

Query: 52  --YEDVVFYEGKFYAVDC 5
             + +V+++ G FYAV C
Sbjct: 194 GHFSEVLYFNGNFYAVSC 211