BLASTX nr result
ID: Catharanthus22_contig00004416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00004416
(1204 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ... 413 e-113
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik... 397 e-108
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592... 392 e-106
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 386 e-105
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 385 e-104
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik... 383 e-104
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik... 382 e-103
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 381 e-103
ref|XP_002331405.1| predicted protein [Populus trichocarpa] 379 e-102
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea] 378 e-102
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 377 e-102
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 376 e-101
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622... 371 e-100
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr... 371 e-100
gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao] 371 e-100
gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao] 371 e-100
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus... 370 e-100
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 369 1e-99
gb|AFK45334.1| unknown [Medicago truncatula] 369 2e-99
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun... 368 2e-99
>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 443
Score = 413 bits (1061), Expect = e-113
Identities = 207/357 (57%), Positives = 253/357 (70%), Gaps = 10/357 (2%)
Frame = +3
Query: 138 ISCP------RVGQSLRILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQK 299
+ CP R Q ++ ++K+Y HY H D+CK RWT+RES+Q+MYARPWQ+
Sbjct: 5 LQCPAKPLANRYQQMEKLTQTETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQE 64
Query: 300 VNDFYSDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKI 479
V+DFYS++V G S +LFR + + D + + ED+ K+ELE +DR GRWAR+ FKI
Sbjct: 65 VSDFYSNVVNGRLSFLELFRSQMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKI 124
Query: 480 VLSYHGASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDK 659
LSYHG SFDGWQKQPGL+TVQG+VE+SLGKFVD GCAVVAGRTDK
Sbjct: 125 DLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDK 184
Query: 660 GVTAFQQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLY 839
GV+A +QVCSFYTWRKDV+P +I DAIN++ PGKIR +SV+EVSR FHPNFSAKWRRYLY
Sbjct: 185 GVSALRQVCSFYTWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLY 244
Query: 840 IFPFNNGEESELGSFCKED----AGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGN 1007
IFP N+GE+SE SF ED Y + +N + TS EL +KD +E
Sbjct: 245 IFPINDGEDSE-QSFDSEDLENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAK 303
Query: 1008 KPTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
KP F + RVNQL+QQLEGKLLSYK+FARDTKASRNVGPPTECF++HARA EA LPC
Sbjct: 304 KPRIFSICRVNQLLQQLEGKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPC 360
>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
Length = 436
Score = 397 bits (1020), Expect = e-108
Identities = 205/359 (57%), Positives = 248/359 (69%), Gaps = 8/359 (2%)
Frame = +3
Query: 135 MISCPRVGQSLRILMENQP---LKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVN 305
M+ P ++LR LMEN + KV+ HY H D+CKFSRWTSRE Y++MYARPW KV
Sbjct: 1 MLRYPTTVRTLRNLMENSSPTATQQKVHFHYNHTDSCKFSRWTSRECYEFMYARPWHKVV 60
Query: 306 DFYSDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRT----GRWARLTF 473
DFY+DMVKG S+S LF KE H+ + + ED+ KSEL IP KD++ GRWAR F
Sbjct: 61 DFYADMVKGHISLSGLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANF 120
Query: 474 KIVLSYHGASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRT 653
IVLSYHG SFDGWQKQP L+TVQG+VERSLG+FVD CA+VAGRT
Sbjct: 121 MIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRT 180
Query: 654 DKGVTAFQQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRY 833
DKGV+A QQVCSFYTWRKDVK + + A++ PGKIR VS+ +VSREFHPNFSAKWR Y
Sbjct: 181 DKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHY 240
Query: 834 LYIFPFNNG-EESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNK 1010
LYIFP ++ E + G +D+ N Q + S E+ +N D + GNK
Sbjct: 241 LYIFPIDDVLGEKQGGQIWIDDS--TNVHQQNECDKSDVDKSNVNEINNEN-DKLVHGNK 297
Query: 1011 PTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQD 1187
PT FEV +VN+L+ QLEGKLLSYKMFARDTKASRN+GPPTECF+FHARA E +PC +D
Sbjct: 298 PTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKD 356
>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
Length = 436
Score = 392 bits (1007), Expect = e-106
Identities = 202/359 (56%), Positives = 248/359 (69%), Gaps = 8/359 (2%)
Frame = +3
Query: 135 MISCPRVGQSLRILMENQP---LKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVN 305
M+ P ++LR LMEN + KV+ HY H D+CKFSRWTSRE Y++MYAR W KV
Sbjct: 1 MLRYPTTVRTLRNLMENPSQTAAQQKVHFHYNHTDSCKFSRWTSRECYEFMYARLWHKVV 60
Query: 306 DFYSDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRT----GRWARLTF 473
DFY+DMVKG S+S+LF KE H+ + + ED+ KSEL IP KD++ GRWAR F
Sbjct: 61 DFYADMVKGHTSLSRLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANF 120
Query: 474 KIVLSYHGASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRT 653
IVLSYHG SFDGWQKQP L+TVQG+VERSLG+FVD CA+VAGRT
Sbjct: 121 MIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRT 180
Query: 654 DKGVTAFQQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRY 833
DKGV+A QQVCSFYTWRKDVK + + A++ PGKIR VS+ +VSREFHPNFSAKWR Y
Sbjct: 181 DKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHY 240
Query: 834 LYIFPFNNG-EESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNK 1010
LYIFP ++ E + G + G + Q + S E+ ++N + + GNK
Sbjct: 241 LYIFPIDDVLGEKQRGQIWID--GSTDVHQQNECGKSDIDKSNVNEINDENNE-LVHGNK 297
Query: 1011 PTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQD 1187
PT FEV +VN+L+ QLEGKLLSYKMFARDTKASRN+GPPTECF+FHARA E +PC +D
Sbjct: 298 PTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKD 356
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 386 bits (992), Expect = e-105
Identities = 203/352 (57%), Positives = 239/352 (67%), Gaps = 7/352 (1%)
Frame = +3
Query: 168 RILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASIS 347
R LMEN+ ++KVY HY H KFSRWT+RES+Q+MY RPWQ+V DFYS++V G S+
Sbjct: 11 RDLMENEK-ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLL 69
Query: 348 KLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 527
L E IHD + +E + K+E + KDR GRWARLTFKIVLSYHGASFDGWQKQP
Sbjct: 70 GLLGIETHPIHDGEI-VEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQP 128
Query: 528 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRK 707
GL+TVQG+VE SLG+FVD G VAGRTDKGVTA QQVCSFYTW+K
Sbjct: 129 GLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKK 188
Query: 708 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 887
DVK Q I DAIN PGK+R +SV+EVSR FHPNFSAKWR Y YIFP N+G++ E S
Sbjct: 189 DVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISEN 248
Query: 888 KED-------AGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQL 1046
+ D YG Q + Y G L D+ ES KP+TF +SRV+QL
Sbjct: 249 EMDIQKISFNEKYGE--QGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQL 306
Query: 1047 MQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 1202
++QLEGKLLSYK+FARDTKASRN+GPPTECF+FHARA EA L D TK
Sbjct: 307 LRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTK 358
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 385 bits (988), Expect = e-104
Identities = 198/342 (57%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Frame = +3
Query: 171 ILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISK 350
++ME Q DKVY Y H D+CKFSRWT+RES+Q+M+ARPWQ+V DFYS V G S+ +
Sbjct: 28 VVMEAQ--NDKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLE 85
Query: 351 LFRKENLVIH-DASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 527
LF + +H D + N LE + D++GRWAR+TFKIVLSYHG SFDGWQKQP
Sbjct: 86 LFGTQAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQP 145
Query: 528 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRK 707
GL+TVQG+VE+SLG+FVD GCA VAGRTDKGV+A QQVCSFYTWRK
Sbjct: 146 GLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRK 205
Query: 708 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 887
DVKP +I DAIN+ PGK+R S++EVSR FHPNFSAKWRRYLYIFP N+GE E
Sbjct: 206 DVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENRE---EI 262
Query: 888 KEDAGYGNTFQPQNLSSNYTS-GSTDCELEEDN-----KDGIESGNKPTTFEVSRVNQLM 1049
+ + G N +N G E +N +D ++ KP +F V RVNQL+
Sbjct: 263 EGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLL 322
Query: 1050 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLP 1175
QQLEGKLLSYKMFARDTKASRNVGPPTECFL+HARA E LP
Sbjct: 323 QQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLP 364
>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 383 bits (984), Expect = e-104
Identities = 199/355 (56%), Positives = 238/355 (67%), Gaps = 7/355 (1%)
Frame = +3
Query: 135 MISCPRVGQSLRILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFY 314
++S G L+ILMEN+ + K Y HY H D C+ +RWT+RESYQ+MY RPWQ+V DFY
Sbjct: 9 LVSPSSAGFGLKILMENRAQR-KDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFY 67
Query: 315 SDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYH 494
S V G S+S L E HD + +EL + KD+TGRWAR TFKIVLSY
Sbjct: 68 SHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYD 127
Query: 495 GASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAF 674
G SFDGWQKQPGL+TVQG+VERSLGKFVD GCA+VAGRTDKGVTA
Sbjct: 128 GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTAL 187
Query: 675 QQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFN 854
+QVCSFYTWR DVKPQ I D+IN+ PGK+R SV++VSR FHPNFSAKWRRYLYI P N
Sbjct: 188 RQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLN 247
Query: 855 NGEESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCE-------LEEDNKDGIESGNKP 1013
+GE E S E+ + +N S C + N + + S +KP
Sbjct: 248 DGENMEPDSTTWENV---ENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKP 304
Query: 1014 TTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
TF ++RVNQL+++LEGKLLSYKMFARDTKASRN GPPTECF++HARAAE LPC
Sbjct: 305 QTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 359
>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 382 bits (982), Expect = e-103
Identities = 199/355 (56%), Positives = 237/355 (66%), Gaps = 7/355 (1%)
Frame = +3
Query: 135 MISCPRVGQSLRILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFY 314
++S G L+ILMEN+ + K Y HY H D C+ +RWT+RESYQ+MY RPWQ+V DFY
Sbjct: 9 LVSPSSAGFGLKILMENRAQR-KDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFY 67
Query: 315 SDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYH 494
S V G S+S L E HD + +EL + KD+TGRWAR TFKIVLSY
Sbjct: 68 SHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYD 127
Query: 495 GASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAF 674
G SFDGWQKQPGL+TVQG+VERSLGKFVD GCA+VAGRTDKGVTA
Sbjct: 128 GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTAL 187
Query: 675 QQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFN 854
+QVCSFYTWR DVKPQ I D+IN+ PGK+R SV++VSR FHPNFSAKWRRYLYI P N
Sbjct: 188 RQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLN 247
Query: 855 NGEESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCE-------LEEDNKDGIESGNKP 1013
+GE E S E+ + +N S C + N + S +KP
Sbjct: 248 DGENMEPDSTTWENV---ENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVSADKP 304
Query: 1014 TTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
TF ++RVNQL+++LEGKLLSYKMFARDTKASRN GPPTECF++HARAAE LPC
Sbjct: 305 QTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 359
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 381 bits (978), Expect = e-103
Identities = 199/351 (56%), Positives = 237/351 (67%), Gaps = 16/351 (4%)
Frame = +3
Query: 171 ILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISK 350
++ME Q DKVY Y H D+CKFSRWT+RES+Q+M+ARPWQ+V DFYS V G S+ +
Sbjct: 28 VVMEAQ--NDKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLE 85
Query: 351 LF----------RKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGA 500
LF +K + V D + N LE + D++GRWAR+TFKIVLSYHG
Sbjct: 86 LFGTQVFFTMELKKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGG 145
Query: 501 SFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQ 680
SFDGWQKQPGL+TVQG+VE+SLG+FVD GCA VAGRTDKGV+A QQ
Sbjct: 146 SFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQ 205
Query: 681 VCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNG 860
VCSFYTWRKDVKP +I DAIN+ PGK+R S++EVSR FHPNFSAKWRRYLYIFP N+G
Sbjct: 206 VCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDG 265
Query: 861 EESELGSFCKEDAGYGNTFQPQNLSSNYTS-GSTDCELEEDN-----KDGIESGNKPTTF 1022
E E + + G N +N G E +N +D ++ KP +F
Sbjct: 266 ENRE---EIEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSF 322
Query: 1023 EVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLP 1175
V RVNQL+QQLEGKLLSYKMFARDTKASRNVGPPTECFL+HARA E LP
Sbjct: 323 SVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLP 373
>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 379 bits (974), Expect = e-102
Identities = 196/342 (57%), Positives = 232/342 (67%), Gaps = 16/342 (4%)
Frame = +3
Query: 198 DKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF------- 356
DKVY Y H D+CKFSRWT+RES+Q+M+ARPWQ+V DFYS V G S+ +LF
Sbjct: 6 DKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQVFFT 65
Query: 357 ---RKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 527
+K + V D + N LE + D++GRWAR+TFKIVLSYHG SFDGWQKQP
Sbjct: 66 MELKKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQP 125
Query: 528 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRK 707
GL+TVQG+VE+SLG+FVD GCA VAGRTDKGV+A QQVCSFYTWRK
Sbjct: 126 GLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRK 185
Query: 708 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 887
DVKP +I DAIN+ PGK+R S++EVSR FHPNFSAKWRRYLYIFP N+GE E
Sbjct: 186 DVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENRE---EI 242
Query: 888 KEDAGYGNTFQPQNLSSNYTS-GSTDCELEEDN-----KDGIESGNKPTTFEVSRVNQLM 1049
+ + G N +N G E +N +D ++ KP +F V RVNQL+
Sbjct: 243 EGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLL 302
Query: 1050 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLP 1175
QQLEGKLLSYKMFARDTKASRNVGPPTECFL+HARA E LP
Sbjct: 303 QQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLP 344
>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
Length = 406
Score = 378 bits (971), Expect = e-102
Identities = 192/358 (53%), Positives = 244/358 (68%), Gaps = 12/358 (3%)
Frame = +3
Query: 165 LRILMENQPLKD----KVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKG 332
LR LME L K Y HY+HNDA RWT++ESYQ+MY+RPWQ+VN FY ++V G
Sbjct: 3 LRNLMEGAALPSHTPAKDYVHYQHNDAFSLCRWTAKESYQFMYSRPWQRVNCFYLELVNG 62
Query: 333 SASISKLFRKENLVIHDASVLIE--DNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASF 506
++S+LF KE IHD ++ + P + L P + RTGRWARLTFKI+LSYHG SF
Sbjct: 63 RRTLSELFPKEKHAIHDTDRTLDVYNYPSASL---PNEQRTGRWARLTFKIILSYHGYSF 119
Query: 507 DGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVC 686
DGWQKQPGL+TVQG++E SLG F+D GCAVVAGRTDKGV+A QVC
Sbjct: 120 DGWQKQPGLNTVQGLIENSLGVFIDEKKALQLKEKNLPRDGCAVVAGRTDKGVSALGQVC 179
Query: 687 SFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNN--- 857
SFYTWRK+V+ + I +AIN++ PGK+R SV++VSREFHPNFSAKWRRYLYIFP N+
Sbjct: 180 SFYTWRKEVEAEDIMEAINDSAPGKLRVTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYR 239
Query: 858 ---GEESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEV 1028
+SE FC ++ D++ G+++G KP FEV
Sbjct: 240 DREAFKSEKNDFCGDNC-------------------------LDDQSGMQTGCKPLNFEV 274
Query: 1029 SRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 1202
SRV+QL+ LEGKLLS++MFARDTKASR++GPPTECF+FHARAAEA+LPC +++ +K
Sbjct: 275 SRVSQLLLHLEGKLLSFRMFARDTKASRSIGPPTECFIFHARAAEAYLPCSEEETKSK 332
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 377 bits (967), Expect = e-102
Identities = 198/345 (57%), Positives = 233/345 (67%)
Frame = +3
Query: 168 RILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASIS 347
R LMEN+ ++KVY HY H KFSRWT+RES+Q+MY RPWQ+V DFYS++V G S+
Sbjct: 11 RDLMENEK-ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLL 69
Query: 348 KLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 527
L E IHD + +E + K+E + KDR GRWARLTFKIVLSYHGASFDGWQKQP
Sbjct: 70 GLLGIETHPIHDGEI-VEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQP 128
Query: 528 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRK 707
GL+TVQG+VE SLG+FVD G VAGRTDKGVTA QQVCSFYTW+K
Sbjct: 129 GLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKK 188
Query: 708 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 887
DVK Q I DAIN PGK+R +SV+EVSR FHPNFSAKWR Y YIFP N+G++ E S
Sbjct: 189 DVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQIS-- 246
Query: 888 KEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGK 1067
N Q +S N E+ KP+TF +SRV+QL++QLEGK
Sbjct: 247 ------ENEMDIQKISFN------------------ENRKKPSTFSISRVDQLLRQLEGK 282
Query: 1068 LLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 1202
LLSYK+FARDTKASRN+GPPTECF+FHARA EA L D TK
Sbjct: 283 LLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTK 327
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 376 bits (965), Expect = e-101
Identities = 189/329 (57%), Positives = 235/329 (71%), Gaps = 3/329 (0%)
Frame = +3
Query: 198 DKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF---RKEN 368
+K Y HY H+D C+FSRWT+RESYQ+MY RPWQ+V DFYS++V G+ S S LF +K
Sbjct: 35 NKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSFSSLFPLHKKYQ 94
Query: 369 LVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGLDTVQG 548
+ D I + +++ +++R+GRWAR TFK+VL YHGASFDGWQKQPGL+TVQG
Sbjct: 95 VDDDDYDAEIPEISDDKVKLKKSEERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQG 154
Query: 549 IVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDVKPQQI 728
+VERSLG+FVD C VVAGRTDKGVTA QQVCSFYTWRKD+ Q I
Sbjct: 155 LVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDI 214
Query: 729 GDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKEDAGYG 908
+AINN GK++A SV+EVSR FHPNFSAKWRRYLYIFPFN+ E+ E + E+
Sbjct: 215 EEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEEQSNKNGENL--- 271
Query: 909 NTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLLSYKMF 1088
T++ + + L D+ + +ESG KP++F VSRV+QL++ LEGKLLSYKMF
Sbjct: 272 ETYEKIESGCGEWNDESFGNLIIDDSEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMF 331
Query: 1089 ARDTKASRNVGPPTECFLFHARAAEAFLP 1175
ARDTKASRN GPPTECF++HARAAEA LP
Sbjct: 332 ARDTKASRNEGPPTECFIYHARAAEARLP 360
>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
Length = 454
Score = 371 bits (953), Expect = e-100
Identities = 194/347 (55%), Positives = 238/347 (68%), Gaps = 10/347 (2%)
Frame = +3
Query: 168 RILMENQPLKDK-VYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASI 344
R+ ME+Q +K VY HY H D+CKF+RWT++ESY++M ARPWQ V DFYSD+V G ++
Sbjct: 31 RLSMESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTL 90
Query: 345 SKLFRKENLVIHDASVLIEDN--PKSELEKIPAKDR--TGRWARLTFKIVLSYHGASFDG 512
S LF E +S+ ++N P+ E +DR +GRWAR FKIV+SYHG SFDG
Sbjct: 91 SDLFGTERT--RTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDG 148
Query: 513 WQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSF 692
WQKQP L+TVQG+VE+ LG FVD GCA+VAGRTDKGVTA QQVCSF
Sbjct: 149 WQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSF 208
Query: 693 YTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESE 872
YTWRKDVKP +I DAIN+ PGKIR +SV++VSR FHPNFSAKWRRYLYIFP N+GE+ E
Sbjct: 209 YTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKRE 268
Query: 873 LGSFCKEDAGYGNTFQPQNLSSNYTSGSTDC-----ELEEDNKDGIESGNKPTTFEVSRV 1037
+ + +T S+N S C L +++ G S KP F + RV
Sbjct: 269 QSIDSEVEVENFHT------SNNVGKQSNGCYENIENLLINDEGGFGSHEKPRNFTICRV 322
Query: 1038 NQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
N L+Q+LEGKLLSYK FARDTKASRN+GPPTECF++HARA EA LPC
Sbjct: 323 NLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPC 369
>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
gi|557556408|gb|ESR66422.1| hypothetical protein
CICLE_v10008288mg [Citrus clementina]
Length = 447
Score = 371 bits (953), Expect = e-100
Identities = 194/347 (55%), Positives = 238/347 (68%), Gaps = 10/347 (2%)
Frame = +3
Query: 168 RILMENQPLKDK-VYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASI 344
R+ ME+Q +K VY HY H D+CKF+RWT++ESY++M ARPWQ V DFYSD+V G ++
Sbjct: 24 RLSMESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTL 83
Query: 345 SKLFRKENLVIHDASVLIEDN--PKSELEKIPAKDR--TGRWARLTFKIVLSYHGASFDG 512
S LF E +S+ ++N P+ E +DR +GRWAR FKIV+SYHG SFDG
Sbjct: 84 SDLFGTERT--RTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDG 141
Query: 513 WQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSF 692
WQKQP L+TVQG+VE+ LG FVD GCA+VAGRTDKGVTA QQVCSF
Sbjct: 142 WQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSF 201
Query: 693 YTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESE 872
YTWRKDVKP +I DAIN+ PGKIR +SV++VSR FHPNFSAKWRRYLYIFP N+GE+ E
Sbjct: 202 YTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKRE 261
Query: 873 LGSFCKEDAGYGNTFQPQNLSSNYTSGSTDC-----ELEEDNKDGIESGNKPTTFEVSRV 1037
+ + +T S+N S C L +++ G S KP F + RV
Sbjct: 262 QSIDSEVEVENFHT------SNNVGKQSNGCYENIENLLINDEGGFGSHEKPRNFTICRV 315
Query: 1038 NQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
N L+Q+LEGKLLSYK FARDTKASRN+GPPTECF++HARA EA LPC
Sbjct: 316 NLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPC 362
>gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
Length = 446
Score = 371 bits (952), Expect = e-100
Identities = 192/343 (55%), Positives = 237/343 (69%), Gaps = 8/343 (2%)
Frame = +3
Query: 174 LMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKL 353
+MEN+ ++KVY HY H+D+C +RWT+RESY++MY R WQ V DFYS++V G ++S L
Sbjct: 32 VMENEA-ENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90
Query: 354 FRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 533
F E + D+ + + K E R+GRW R+TFKI++SY+G +FDGWQKQPGL
Sbjct: 91 FGTETSIHDDSETVEVSDEKGE--------RSGRWERVTFKIIISYNGGAFDGWQKQPGL 142
Query: 534 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 713
+TVQ IVERSLG+FVD GCAVVAGRTDKGV+A +QVCSFYTWRKDV
Sbjct: 143 NTVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDV 202
Query: 714 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGE--------ES 869
KP I DAIN+ PGK+R VSV+EVSR FHPNFSAKWR YLYIFP +N E +
Sbjct: 203 KPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKK 262
Query: 870 ELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLM 1049
E+ +F D Y Q N + + + DN G+E+ NKPT F V RVNQL+
Sbjct: 263 EVENFI-SDGNYNE--QRNGYLENIRWENVENLIISDNM-GLEAANKPTRFSVCRVNQLL 318
Query: 1050 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
QQLE KLLSYKMFARDTKASRN+GPPTECF++HARAAEA +PC
Sbjct: 319 QQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPC 361
>gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
Length = 444
Score = 371 bits (952), Expect = e-100
Identities = 192/343 (55%), Positives = 237/343 (69%), Gaps = 8/343 (2%)
Frame = +3
Query: 174 LMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKL 353
+MEN+ ++KVY HY H+D+C +RWT+RESY++MY R WQ V DFYS++V G ++S L
Sbjct: 32 VMENEA-ENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90
Query: 354 FRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 533
F E + D+ + + K E R+GRW R+TFKI++SY+G +FDGWQKQPGL
Sbjct: 91 FGTETSIHDDSETVEVSDEKGE--------RSGRWERVTFKIIISYNGGAFDGWQKQPGL 142
Query: 534 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 713
+TVQ IVERSLG+FVD GCAVVAGRTDKGV+A +QVCSFYTWRKDV
Sbjct: 143 NTVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDV 202
Query: 714 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGE--------ES 869
KP I DAIN+ PGK+R VSV+EVSR FHPNFSAKWR YLYIFP +N E +
Sbjct: 203 KPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKK 262
Query: 870 ELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLM 1049
E+ +F D Y Q N + + + DN G+E+ NKPT F V RVNQL+
Sbjct: 263 EVENFI-SDGNYNE--QRNGYLENIRWENVENLIISDNM-GLEAANKPTRFSVCRVNQLL 318
Query: 1050 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC 1178
QQLE KLLSYKMFARDTKASRN+GPPTECF++HARAAEA +PC
Sbjct: 319 QQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPC 361
>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
Length = 440
Score = 370 bits (951), Expect = e-100
Identities = 184/321 (57%), Positives = 226/321 (70%)
Frame = +3
Query: 213 HYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLFRKENLVIHDASV 392
HY H D +++RWT+RES+Q+MYARPWQ+VNDFY ++V+ + S+S LF + ++ H+ +
Sbjct: 50 HYNHTDPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGPQTILDHNDTG 109
Query: 393 LIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGLDTVQGIVERSLGK 572
+ + +SELE + ++DR+GRWAR TFKI+LSYHG SFDGWQKQPGL+TVQGIVE SLGK
Sbjct: 110 IAALSDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGK 169
Query: 573 FVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDVKPQQIGDAINNTE 752
FVD GCAVVAGRTDKGVT QQVCSFYTW+KDVKP+ I DAIN
Sbjct: 170 FVDEKKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQAA 229
Query: 753 PGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKEDAGYGNTFQPQNL 932
GK+R +SV+EVSR FHPNFSAKWR YLYIFP NG + S G +
Sbjct: 230 LGKLRVISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRDQSNS-------NGESCDISKY 282
Query: 933 SSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASR 1112
+ + S S KDGIE+ K F VS+VN L+++LEGKLLSYKMFARDTKASR
Sbjct: 283 NEMHDSSS---------KDGIENQEKSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKASR 333
Query: 1113 NVGPPTECFLFHARAAEAFLP 1175
N GPPTECF++HARA E LP
Sbjct: 334 NDGPPTECFVYHARAMEVKLP 354
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Glycine max]
Length = 444
Score = 369 bits (948), Expect = 1e-99
Identities = 185/341 (54%), Positives = 233/341 (68%), Gaps = 1/341 (0%)
Frame = +3
Query: 183 NQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLFRK 362
N + + + HY H K++RWT+RES+++MYARPWQ+VNDFY ++V+ + S+ LF
Sbjct: 42 NNLRQTETHVHYNHTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGA 101
Query: 363 ENLVI-HDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGLDT 539
+ LV+ H+ + + + SELE + ++DR+GRWAR TFKI+LSYHG SFDGWQKQPGL+T
Sbjct: 102 QTLVVDHNDTGIAALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNT 161
Query: 540 VQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDVKP 719
VQ IVE SLGKFVD GCA+VAGRTDKGVT QQVCSFYTW+KDVKP
Sbjct: 162 VQSIVEGSLGKFVDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKP 221
Query: 720 QQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKEDA 899
+ I DAIN+ PGK+R +SV+EVSR FHPNFSAKWRRYLYIFP NG
Sbjct: 222 RDIEDAINHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNG------------- 268
Query: 900 GYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLLSY 1079
G T Q + Y S + + +KD +E+ K F +S+VN+L+++LEGKLLSY
Sbjct: 269 --GYTDQSSDNGEFYDSFKYNEIHDSASKDELENEKKSYAFSISKVNRLLRKLEGKLLSY 326
Query: 1080 KMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 1202
KMFARDTKASRN GPPTECF++HARA E LP TK
Sbjct: 327 KMFARDTKASRNDGPPTECFVYHARAMEVKLPATDHGEETK 367
>gb|AFK45334.1| unknown [Medicago truncatula]
Length = 400
Score = 369 bits (946), Expect = 2e-99
Identities = 187/343 (54%), Positives = 235/343 (68%), Gaps = 1/343 (0%)
Frame = +3
Query: 177 MENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF 356
ME+Q +D + HY H K++RW +RES+++MYARPWQ+VN FYS+ V+G+ S+ LF
Sbjct: 1 MEHQSERDSHHVHYNHTHPSKYARWNARESFEFMYARPWQRVNHFYSNTVRGNLSLPLLF 60
Query: 357 RKENLVIHDASVLIEDNPK-SELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 533
+ + L +HD+ V P+ SE + +KDR+G+WAR FKI+LSYHG SFDGWQKQP L
Sbjct: 61 QSQTLPVHDSRV-----PEISEFQSGASKDRSGKWARFNFKILLSYHGGSFDGWQKQPNL 115
Query: 534 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 713
+TVQ +VE SLGKFVD GCA VAGRTDKGVTA QQVCSFYTW+KD+
Sbjct: 116 NTVQSVVEVSLGKFVDENKTQLLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKDI 175
Query: 714 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKE 893
KP++I DAIN+ PGK+R VSV EVSR FHPNFSAKWRRYLYIFP +G++ +
Sbjct: 176 KPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQD--------K 227
Query: 894 DAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLL 1073
D GN + N S D+KD +E NK F V +VN+L+Q+LEGK+L
Sbjct: 228 DQSGGNGESCDSFIYNEICDS-------DSKDELEKENKSYVFGVRKVNRLLQKLEGKML 280
Query: 1074 SYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 1202
SYKMFARDTKASRN GPPTECF+ HARA EA LP ++ T+
Sbjct: 281 SYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITENGEETR 323
>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase A
[Medicago truncatula]
Length = 400
Score = 368 bits (945), Expect = 2e-99
Identities = 187/343 (54%), Positives = 235/343 (68%), Gaps = 1/343 (0%)
Frame = +3
Query: 177 MENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF 356
ME+Q +D + HY H K++RW +RES+++MYARPWQ+VN FYS+ V+G+ S+ LF
Sbjct: 1 MEHQSERDSHHVHYNHTHPSKYARWNARESFEFMYARPWQRVNHFYSNTVRGNFSLPLLF 60
Query: 357 RKENLVIHDASVLIEDNPK-SELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 533
+ + L +HD+ V P+ SE + +KDR+G+WAR FKI+LSYHG SFDGWQKQP L
Sbjct: 61 QSQTLPVHDSRV-----PEISEFQSGASKDRSGKWARFNFKILLSYHGGSFDGWQKQPNL 115
Query: 534 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXXGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 713
+TVQ +VE SLGKFVD GCA VAGRTDKGVTA QQVCSFYTW+KD+
Sbjct: 116 NTVQSVVEVSLGKFVDENKTQLLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKDI 175
Query: 714 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKE 893
KP++I DAIN+ PGK+R VSV EVSR FHPNFSAKWRRYLYIFP +G++ +
Sbjct: 176 KPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQD--------K 227
Query: 894 DAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLL 1073
D GN + N S D+KD +E NK F V +VN+L+Q+LEGK+L
Sbjct: 228 DQSGGNGESCDSFIYNEICDS-------DSKDELEKENKSYVFGVRKVNRLLQKLEGKML 280
Query: 1074 SYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 1202
SYKMFARDTKASRN GPPTECF+ HARA EA LP ++ T+
Sbjct: 281 SYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITENGEETR 323