BLASTX nr result
ID: Catharanthus22_contig00004312
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00004312
(449 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354878.1| PREDICTED: protein DCL, chloroplastic-like [... 80 4e-13
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers... 80 4e-13
emb|CAD12248.1| DCL protein [Coffea arabica] 70 4e-10
gb|EOY14445.1| Uncharacterized protein isoform 6 [Theobroma cacao] 65 1e-08
gb|EOY14443.1| Uncharacterized protein isoform 4 [Theobroma cacao] 65 1e-08
gb|EOY14440.1| Uncharacterized protein isoform 1 [Theobroma caca... 65 1e-08
gb|EXC32856.1| hypothetical protein L484_009556 [Morus notabilis] 64 3e-08
ref|XP_004291102.1| PREDICTED: protein DCL, chloroplastic-like [... 62 6e-08
gb|EMJ27007.1| hypothetical protein PRUPE_ppa011355mg [Prunus pe... 62 8e-08
ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [... 62 1e-07
ref|XP_002510210.1| DCL protein, chloroplast precursor, putative... 61 1e-07
ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis... 61 2e-07
ref|XP_006473317.1| PREDICTED: protein DCL, chloroplastic-like [... 60 3e-07
ref|XP_006434757.1| hypothetical protein CICLE_v10002377mg [Citr... 60 3e-07
ref|XP_004292815.1| PREDICTED: protein DCL, chloroplastic-like [... 60 3e-07
ref|XP_006838070.1| hypothetical protein AMTR_s00091p00170630 [A... 60 4e-07
ref|NP_001235407.1| uncharacterized protein LOC100306718 [Glycin... 60 4e-07
gb|ABC47855.1| defective chloroplast and leaves protein [Glycine... 60 4e-07
gb|ESW08681.1| hypothetical protein PHAVU_009G065400g [Phaseolus... 59 5e-07
gb|AFK33859.1| unknown [Lotus japonicus] 59 5e-07
>ref|XP_006354878.1| PREDICTED: protein DCL, chloroplastic-like [Solanum tuberosum]
Length = 224
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/90 (55%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
RL C+AVKTGSEG G SD +AELLRKPVIS
Sbjct: 41 RLCRCAAVKTGSEGGGIRSD---NAELLRKPVISTELETTSESEELVKEESDDEVGKKGG 97
Query: 86 ET--WVDWEDQILEDTVPLVGFVRMILHSG 3
+ WVDWEDQILEDTVPLVGFVRMILHSG
Sbjct: 98 DGEGWVDWEDQILEDTVPLVGFVRMILHSG 127
>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
DCL, chloroplastic; AltName: Full=Defective chloroplasts
and leaves protein; Flags: Precursor
gi|1305531|gb|AAC49433.1| defective chloroplasts and
leaves; required for chloroplast development and
palisade cell differentiation in leaves [Solanum
lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
lycopersicum]
Length = 224
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/90 (55%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
RL C+AVKTGSEG G SD +AELLRKPVIS
Sbjct: 41 RLCRCAAVKTGSEGGGIRSD---NAELLRKPVISTELETTSESEELVKEESDDEVGKKSG 97
Query: 86 ET--WVDWEDQILEDTVPLVGFVRMILHSG 3
+ WVDWEDQILEDTVPLVGFVRMILHSG
Sbjct: 98 DGEGWVDWEDQILEDTVPLVGFVRMILHSG 127
>emb|CAD12248.1| DCL protein [Coffea arabica]
Length = 224
Score = 69.7 bits (169), Expect = 4e-10
Identities = 54/131 (41%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = -1
Query: 380 MASISCSKSLCNHSLHRXXXXXXXXXXXXXXXF-QLCP----RRLRYCSAVKTGSEGRGG 216
MASIS SK + + H QL P + RY + T SEGRG
Sbjct: 1 MASISSSKFMNSSPFHNSNSISSNLLLSPPSLSFQLYPYNRSQLRRYAAVRTTSSEGRGS 60
Query: 215 GSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXETWVDWEDQILEDTVPL 36
S AELLRKPV+S E WVDWEDQIL+DTVPL
Sbjct: 61 DS---FGAELLRKPVVS-PAVVSEGEDSVVEEDDKYRSGGEEVEAWVDWEDQILQDTVPL 116
Query: 35 VGFVRMILHSG 3
V FVRMILHSG
Sbjct: 117 VNFVRMILHSG 127
>gb|EOY14445.1| Uncharacterized protein isoform 6 [Theobroma cacao]
Length = 231
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/88 (43%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
++R C A++TGS+G GS A++LRKP I
Sbjct: 38 QVRSC-ALRTGSDGGRIGSQESYGADMLRKPSI-----LTPKDSGGTSEQEEGSEGKRKR 91
Query: 86 ETWVDWEDQILEDTVPLVGFVRMILHSG 3
W+DWED+ILEDTVPLVGFVRMI+HSG
Sbjct: 92 GKWIDWEDRILEDTVPLVGFVRMIIHSG 119
>gb|EOY14443.1| Uncharacterized protein isoform 4 [Theobroma cacao]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/88 (43%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
++R C A++TGS+G GS A++LRKP I
Sbjct: 38 QVRSC-ALRTGSDGGRIGSQESYGADMLRKPSI-----LTPKDSGGTSEQEEGSEGKRKR 91
Query: 86 ETWVDWEDQILEDTVPLVGFVRMILHSG 3
W+DWED+ILEDTVPLVGFVRMI+HSG
Sbjct: 92 GKWIDWEDRILEDTVPLVGFVRMIIHSG 119
>gb|EOY14440.1| Uncharacterized protein isoform 1 [Theobroma cacao]
gi|508722544|gb|EOY14441.1| Uncharacterized protein
isoform 1 [Theobroma cacao] gi|508722545|gb|EOY14442.1|
Uncharacterized protein isoform 1 [Theobroma cacao]
gi|508722547|gb|EOY14444.1| Uncharacterized protein
isoform 1 [Theobroma cacao]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/88 (43%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
++R C A++TGS+G GS A++LRKP I
Sbjct: 38 QVRSC-ALRTGSDGGRIGSQESYGADMLRKPSI-----LTPKDSGGTSEQEEGSEGKRKR 91
Query: 86 ETWVDWEDQILEDTVPLVGFVRMILHSG 3
W+DWED+ILEDTVPLVGFVRMI+HSG
Sbjct: 92 GKWIDWEDRILEDTVPLVGFVRMIIHSG 119
>gb|EXC32856.1| hypothetical protein L484_009556 [Morus notabilis]
Length = 233
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/90 (44%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Frame = -1
Query: 248 AVKTGSEGRGG--GSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXET-- 81
A+KTGS+G G GS +LLRKPV+S
Sbjct: 45 ALKTGSDGGGSRIGSQELFGPDLLRKPVVSPRKDLAGISEEEKEIERKRNYGGGGGGDDD 104
Query: 80 -----WVDWEDQILEDTVPLVGFVRMILHS 6
WVDWED+ILEDTVPLVGFVRMILHS
Sbjct: 105 EEEDKWVDWEDKILEDTVPLVGFVRMILHS 134
>ref|XP_004291102.1| PREDICTED: protein DCL, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 204
Score = 62.4 bits (150), Expect = 6e-08
Identities = 42/88 (47%), Positives = 46/88 (52%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
R R C A+KTG+ GR P ELLRKPV+
Sbjct: 38 RARLC-ALKTGA-GRQESDGP----ELLRKPVVK-------------DLDGNSEEDEGED 78
Query: 86 ETWVDWEDQILEDTVPLVGFVRMILHSG 3
WVDWED+ILEDTVPLVGFVRMILHSG
Sbjct: 79 GKWVDWEDKILEDTVPLVGFVRMILHSG 106
>gb|EMJ27007.1| hypothetical protein PRUPE_ppa011355mg [Prunus persica]
Length = 214
Score = 62.0 bits (149), Expect = 8e-08
Identities = 47/129 (36%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = -1
Query: 380 MASISCSKSLCNHSLHRXXXXXXXXXXXXXXXFQLCPRRLRYCSAVKTGSEGRGGGSDPY 201
MAS+S S L +H ++ + + R C A+KTG++G P
Sbjct: 1 MASLSRSPPLVHHQINSLTLNPCPVTLSFPFL-KTTALQARLC-ALKTGADGGSRTGRPG 58
Query: 200 ASAE---LLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXETWVDWEDQILEDTVPLVG 30
LLRKPV+S WVDWED+ILEDTVPLVG
Sbjct: 59 TQGPDPGLLRKPVVSSGKDMDGISDEDEGEDGK----------WVDWEDKILEDTVPLVG 108
Query: 29 FVRMILHSG 3
FVRMILHSG
Sbjct: 109 FVRMILHSG 117
>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
chloroplastic-like [Cucumis sativus]
Length = 225
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = -1
Query: 248 AVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXETWVDW 69
A+KTG EG S S++LLRKPV WVDW
Sbjct: 46 ALKTGPEGIRLRSHQEYSSDLLRKPV-GPSAKDLAGPSEDDDSSEESGNEDEEEVEWVDW 104
Query: 68 EDQILEDTVPLVGFVRMILHSG 3
ED+ILEDTVPLVGFVRM+LH+G
Sbjct: 105 EDKILEDTVPLVGFVRMVLHTG 126
>ref|XP_002510210.1| DCL protein, chloroplast precursor, putative [Ricinus communis]
gi|223550911|gb|EEF52397.1| DCL protein, chloroplast
precursor, putative [Ricinus communis]
Length = 214
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/82 (43%), Positives = 43/82 (52%)
Frame = -1
Query: 248 AVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXETWVDW 69
A+KTGS+G ++LLRKP++ + VDW
Sbjct: 47 ALKTGSDG----------SDLLRKPIVPSEKELSGISDDEEDSNRKRDNKDKEDDELVDW 96
Query: 68 EDQILEDTVPLVGFVRMILHSG 3
EDQILEDTVPLVGFVRMILHSG
Sbjct: 97 EDQILEDTVPLVGFVRMILHSG 118
>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
gi|147773590|emb|CAN69898.1| hypothetical protein
VITISV_032063 [Vitis vinifera]
Length = 205
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/82 (46%), Positives = 42/82 (51%)
Frame = -1
Query: 248 AVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXETWVDW 69
A+KT S+G S +LLRKP +S WVDW
Sbjct: 42 ALKTASDG----SQEVYGPDLLRKPHVSAPDDEGDRKRTKRKGGE-----------WVDW 86
Query: 68 EDQILEDTVPLVGFVRMILHSG 3
EDQILEDTVPLVGFVRMILHSG
Sbjct: 87 EDQILEDTVPLVGFVRMILHSG 108
>ref|XP_006473317.1| PREDICTED: protein DCL, chloroplastic-like [Citrus sinensis]
Length = 227
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/87 (43%), Positives = 45/87 (51%)
Frame = -1
Query: 263 LRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXE 84
LR +A++ S+G GS LLRKPV+S
Sbjct: 48 LRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEG----- 100
Query: 83 TWVDWEDQILEDTVPLVGFVRMILHSG 3
W+DWED+ILEDTVPLVGFVRMILHSG
Sbjct: 101 -WIDWEDKILEDTVPLVGFVRMILHSG 126
>ref|XP_006434757.1| hypothetical protein CICLE_v10002377mg [Citrus clementina]
gi|557536879|gb|ESR47997.1| hypothetical protein
CICLE_v10002377mg [Citrus clementina]
Length = 227
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/87 (43%), Positives = 45/87 (51%)
Frame = -1
Query: 263 LRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXE 84
LR +A++ S+G GS LLRKPV+S
Sbjct: 48 LRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEG----- 100
Query: 83 TWVDWEDQILEDTVPLVGFVRMILHSG 3
W+DWED+ILEDTVPLVGFVRMILHSG
Sbjct: 101 -WIDWEDKILEDTVPLVGFVRMILHSG 126
>ref|XP_004292815.1| PREDICTED: protein DCL, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 162
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/91 (43%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = -1
Query: 266 RLRYCSAVKTGSEGRGGGSDPYASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXX 87
R R C A+KTG+ G ELLRKPV++
Sbjct: 38 RTRLC-ALKTGA-----GRQEADGLELLRKPVVTDLDIDLSAPDPVHLQVYLDGNSEEDE 91
Query: 86 ET---WVDWEDQILEDTVPLVGFVRMILHSG 3
WVDWED+ILEDTVPLVGFVRMILHSG
Sbjct: 92 GEDGKWVDWEDKILEDTVPLVGFVRMILHSG 122
>ref|XP_006838070.1| hypothetical protein AMTR_s00091p00170630 [Amborella trichopoda]
gi|548840488|gb|ERN00639.1| hypothetical protein
AMTR_s00091p00170630 [Amborella trichopoda]
Length = 122
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1
Query: 80 WVDWEDQILEDTVPLVGFVRMILHSG 3
WVDWEDQILEDTVPLVGFVRMILHSG
Sbjct: 96 WVDWEDQILEDTVPLVGFVRMILHSG 121
>ref|NP_001235407.1| uncharacterized protein LOC100306718 [Glycine max]
gi|255629361|gb|ACU15025.1| unknown [Glycine max]
Length = 212
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1
Query: 80 WVDWEDQILEDTVPLVGFVRMILHSG 3
WVDWEDQILEDTVPLVGFVRMILHSG
Sbjct: 90 WVDWEDQILEDTVPLVGFVRMILHSG 115
>gb|ABC47855.1| defective chloroplast and leaves protein [Glycine max]
Length = 204
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1
Query: 80 WVDWEDQILEDTVPLVGFVRMILHSG 3
WVDWEDQILEDTVPLVGFVRMILHSG
Sbjct: 82 WVDWEDQILEDTVPLVGFVRMILHSG 107
>gb|ESW08681.1| hypothetical protein PHAVU_009G065400g [Phaseolus vulgaris]
Length = 217
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -1
Query: 80 WVDWEDQILEDTVPLVGFVRMILHSG 3
W+DWEDQILEDTVPLVGFVRMILHSG
Sbjct: 95 WIDWEDQILEDTVPLVGFVRMILHSG 120
>gb|AFK33859.1| unknown [Lotus japonicus]
Length = 224
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/66 (48%), Positives = 36/66 (54%)
Frame = -1
Query: 200 ASAELLRKPVISRXXXXXXXXXXXXXXXXXXXXXXXXXETWVDWEDQILEDTVPLVGFVR 21
A+ LLRKP+I+ + WVDWEDQILEDTVPLVGFVR
Sbjct: 62 AADNLLRKPLITPRKDPAGVLEEHGYAYEEEDDEEEEEDKWVDWEDQILEDTVPLVGFVR 121
Query: 20 MILHSG 3
ILHSG
Sbjct: 122 TILHSG 127