BLASTX nr result

ID: Catharanthus22_contig00004303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00004303
         (1881 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173482.1| hypothetical protein NitaMp145 [Nicotiana tabac...    65   1e-07
ref|YP_006291826.1| orf42 gene product (mitochondrion) [Daucus c...    60   3e-06

>ref|YP_173482.1| hypothetical protein NitaMp145 [Nicotiana tabacum]
           gi|56806647|dbj|BAD83548.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 103

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
 Frame = +2

Query: 20  MVHCLFIVLAQEPKRTRLYLLYWTFAVERSPVLPCTDHI*IHIDSFFVPGPASQL----- 184
           MVH LFIVLA+EPKRTRL            P+     H  I ++      PA+ +     
Sbjct: 1   MVHRLFIVLAREPKRTRLLPTVLDLRPGILPLSNRNQHHCIALEQLSGRRPATSVHRYRF 60

Query: 185 ----------FAGW*RSKPCLVRQNWIKKRECSTGTTANKM 277
                       G  RS+ CLVR+NW KKRECSTGTTAN +
Sbjct: 61  ILRTWSSLTTLRGLVRSQSCLVRRNWTKKRECSTGTTANNV 101


>ref|YP_006291826.1| orf42 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081988|gb|AEY81180.1| orf42 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 133

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
 Frame = +2

Query: 20  MVHCLFIVLAQEPKRTR--LYLLYWT--------------FAVER-SPVLPCTDHI*IHI 148
           MVHCLF  LA++PK+     YLLYWT               A+E+ S   P T    +H 
Sbjct: 1   MVHCLF--LARKPKQNEHACYLLYWTPDQALYLCRIGTNTTALEQLSGRRPATS---VHR 55

Query: 149 DSFFVPGPAS-QLFAGW*RSKPCLVRQNWIKKRECSTGTTANK 274
             F +   +S     G  RS+ CLVR+NW KK+ECSTGTTANK
Sbjct: 56  YRFILHTWSSLTTLRGLVRSQSCLVRRNWAKKKECSTGTTANK 98


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