BLASTX nr result
ID: Catharanthus22_contig00004239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00004239
(585 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY04693.1| 5\'-3\' exonuclease family protein isoform 1 [The... 95 1e-17
ref|XP_004234812.1| PREDICTED: DNA polymerase I-like [Solanum ly... 89 8e-16
gb|EOY04694.1| 5\'-3\' exonuclease family protein isoform 2, par... 87 4e-15
ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini... 86 7e-15
ref|XP_006366552.1| PREDICTED: uncharacterized protein LOC102600... 84 2e-14
gb|EMJ27195.1| hypothetical protein PRUPE_ppa010262mg [Prunus pe... 74 2e-11
ref|XP_002530573.1| hypothetical protein RCOM_0547690 [Ricinus c... 68 2e-09
ref|XP_006478602.1| PREDICTED: uncharacterized protein LOC102609... 61 2e-07
ref|XP_006478601.1| PREDICTED: uncharacterized protein LOC102609... 61 2e-07
ref|XP_006575022.1| PREDICTED: uncharacterized protein LOC100811... 60 5e-07
ref|XP_004505167.1| PREDICTED: DNA polymerase I-like isoform X2 ... 60 5e-07
ref|XP_004505166.1| PREDICTED: DNA polymerase I-like isoform X1 ... 60 5e-07
ref|XP_003520177.1| PREDICTED: uncharacterized protein LOC100811... 60 5e-07
ref|XP_003528494.1| PREDICTED: uncharacterized protein LOC100792... 56 8e-06
ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arab... 56 8e-06
>gb|EOY04693.1| 5\'-3\' exonuclease family protein isoform 1 [Theobroma cacao]
Length = 440
Score = 95.1 bits (235), Expect = 1e-17
Identities = 56/131 (42%), Positives = 80/131 (61%)
Frame = -3
Query: 394 MACYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSC 215
MAC+Q + Q HSLWR++ F R+FS TQ+ NL + KK Y + P KGY +S
Sbjct: 1 MACFQSLNFQTHSLWRSLHCFQRNFSRTQRVGNNLPSFKKFYVIRPPPCQTIKGYCSLSY 60
Query: 214 SLKSDVSGAAYDTSPNSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDGT 35
+L + + GA + TS + N +Q+ Q D ++ ++R VN + SN RVMLIDGT
Sbjct: 61 TLNT-LPGARHATS-HGNAVISSKKEQLLHQEAALDTSNLQERVVNANYSNNRVMLIDGT 118
Query: 34 AVMYRAYYRLL 2
+V+YRAYY+LL
Sbjct: 119 SVIYRAYYKLL 129
>ref|XP_004234812.1| PREDICTED: DNA polymerase I-like [Solanum lycopersicum]
Length = 436
Score = 89.0 bits (219), Expect = 8e-16
Identities = 51/131 (38%), Positives = 71/131 (54%)
Frame = -3
Query: 394 MACYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSC 215
MAC+Q QI S+WRTV + G S + ++L+P+Y ST KGY C
Sbjct: 1 MACHQLLHCQIQSMWRTVFHLGSKLSNSHF--------RRLHPIYPLSTSLHKGY----C 48
Query: 214 SLKSDVSGAAYDTSPNSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDGT 35
+ + DT DQ+ R+ FD H++ RS N+D SNG++MLIDGT
Sbjct: 49 RISEPIYAKNIDT------------DQVVRRDGLFDTPHTEIRSTNIDPSNGKLMLIDGT 96
Query: 34 AVMYRAYYRLL 2
+++YRAYYRLL
Sbjct: 97 SIIYRAYYRLL 107
>gb|EOY04694.1| 5\'-3\' exonuclease family protein isoform 2, partial [Theobroma
cacao]
Length = 365
Score = 86.7 bits (213), Expect = 4e-15
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Frame = -3
Query: 367 QIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSCSLKSDVSGA 188
Q HSLWR++ F R+FS TQ+ NL + KK Y + P KGY +S +L + + GA
Sbjct: 10 QTHSLWRSLHCFQRNFSRTQRVGNNLPSFKKFYVIRPPPCQTIKGYCSLSYTLNT-LPGA 68
Query: 187 AYDTSP-NSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDGTAVMYRAYY 11
+ TS N+ IS +Q+ Q D ++ ++R VN + SN RVMLIDGT+V+YRAYY
Sbjct: 69 RHATSHGNAVISSK--KEQLLHQEAALDTSNLQERVVNANYSNNRVMLIDGTSVIYRAYY 126
Query: 10 RLL 2
+LL
Sbjct: 127 KLL 129
>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
gi|296084279|emb|CBI24667.3| unnamed protein product
[Vitis vinifera]
Length = 441
Score = 85.9 bits (211), Expect = 7e-15
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 MACYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSC 215
MACY+ S H I LW + + FS TQK N ++ ++SPS +KG +S
Sbjct: 1 MACYRSSHHHIRFLWGNLNCWRSSFSRTQKIGNNSCCLQRRNLIHSPSILSRKGCCTLSN 60
Query: 214 SLKSDVSGAAYDTS-PNSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDG 38
SL S + A+ S N+ IS +++ QG D K+R +++ +SNGRVMLIDG
Sbjct: 61 SLDSSIHEVAHTISYGNTTISSK--SERKLCQGAFVDSVDHKERKMDISSSNGRVMLIDG 118
Query: 37 TAVMYRAYYRLL 2
T+++YRAYY+LL
Sbjct: 119 TSIIYRAYYKLL 130
>ref|XP_006366552.1| PREDICTED: uncharacterized protein LOC102600473 [Solanum tuberosum]
Length = 430
Score = 84.3 bits (207), Expect = 2e-14
Identities = 51/131 (38%), Positives = 69/131 (52%)
Frame = -3
Query: 394 MACYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSC 215
MAC+Q QI SLWRTV + G S + ++L P+ ST KGY C
Sbjct: 1 MACHQLLHCQIQSLWRTVFHLGSKLSSSHF--------RRLRPICPLSTSLNKGY----C 48
Query: 214 SLKSDVSGAAYDTSPNSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDGT 35
+ + DT DQ+ R+ FD H++ RS N+D SNG++MLIDGT
Sbjct: 49 RVSQPIYAKNIDT------------DQVLRRDGLFDSPHTEIRSTNIDPSNGKLMLIDGT 96
Query: 34 AVMYRAYYRLL 2
+++YRAYYRLL
Sbjct: 97 SIIYRAYYRLL 107
>gb|EMJ27195.1| hypothetical protein PRUPE_ppa010262mg [Prunus persica]
Length = 257
Score = 74.3 bits (181), Expect = 2e-11
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Frame = -3
Query: 436 LAAEISRNEVA*NYMACYQF--SSHQ----IHS--LWRTVKYFGRHFSETQKACVNLVTP 281
L E+ N V N CY+F SSH IHS L R+ + F R FS Q +P
Sbjct: 76 LCFEVLANAVGMNVKWCYEFMASSHSSLLHIHSFSLRRSFRLFARSFSSIQ-------SP 128
Query: 280 KKL-----YPVYSPSTCFKKGYGQVSCSLKSDVSGAAYDTSPNSNISDPVGNDQIPRQGL 116
KKL P+ SP KGY +SCS S + G + + S ++Q+ +
Sbjct: 129 KKLDSLRFSPIKSP-----KGYCNISCSFNSALPGVVRENGDAAFYSK---SEQVLCGDM 180
Query: 115 RFDFAHSKDRSVNVDTSNGRVMLIDGTAVMYRAYYRLL 2
++++VN + S+GRVMLIDGT+++YRAYY+LL
Sbjct: 181 PLGSVKQEEKTVNSNPSDGRVMLIDGTSIIYRAYYKLL 218
>ref|XP_002530573.1| hypothetical protein RCOM_0547690 [Ricinus communis]
gi|223529872|gb|EEF31803.1| hypothetical protein
RCOM_0547690 [Ricinus communis]
Length = 180
Score = 67.8 bits (164), Expect = 2e-09
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Frame = -3
Query: 388 CYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSCSL 209
C + SLWR Y G ++ L K L ++ ST KKG+ +S
Sbjct: 4 CQSLNLRVQSSLWRNFNYLGEKLKRARRVGSFLSNLKTLVQIHPSSTLSKKGFYGIS--- 60
Query: 208 KSDVSGAAYDTSPNSNISDPVGNDQI--PRQGLRFDFAHSKDRSVNVDT---------SN 62
S S D S S ++++ P QG FD ++R VN + SN
Sbjct: 61 -STSSALPQDACVTSRSSTFTSSEELHMPHQGAIFDSIKYEERLVNTTSQSDVANSSPSN 119
Query: 61 GRVMLIDGTAVMYRAYYRLL 2
GR+MLIDGT+++YRAYY+LL
Sbjct: 120 GRLMLIDGTSIIYRAYYKLL 139
>ref|XP_006478602.1| PREDICTED: uncharacterized protein LOC102609974 isoform X2 [Citrus
sinensis]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 MACYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSC 215
MA Q + +IHS WR++ F + FS+ Q+ L K+ S+ KG +S
Sbjct: 1 MAYQQSLNLRIHSFWRSLNCFRKDFSKPQRTGNTLFNIKRFDLARLSSSQSTKGSCCLSI 60
Query: 214 SLKSDVSGAAYDTSPNSNISDPVGNDQIPRQGLR-FDFAHSKDRSVNVDTSNGRVMLIDG 38
+L ++V G +N V + + D ++ +V+ SNGRVMLIDG
Sbjct: 61 NLSTNVRGVG-----RANFHSVVTSKSDQTLSVEALDPVKCEESAVSPKPSNGRVMLIDG 115
Query: 37 TAVMYRAYYRLL 2
T+++YRAYY++L
Sbjct: 116 TSIIYRAYYKIL 127
>ref|XP_006478601.1| PREDICTED: uncharacterized protein LOC102609974 isoform X1 [Citrus
sinensis]
Length = 439
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 MACYQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSC 215
MA Q + +IHS WR++ F + FS+ Q+ L K+ S+ KG +S
Sbjct: 1 MAYQQSLNLRIHSFWRSLNCFRKDFSKPQRTGNTLFNIKRFDLARLSSSQSTKGSCCLSI 60
Query: 214 SLKSDVSGAAYDTSPNSNISDPVGNDQIPRQGLR-FDFAHSKDRSVNVDTSNGRVMLIDG 38
+L ++V G +N V + + D ++ +V+ SNGRVMLIDG
Sbjct: 61 NLSTNVRGVG-----RANFHSVVTSKSDQTLSVEALDPVKCEESAVSPKPSNGRVMLIDG 115
Query: 37 TAVMYRAYYRLL 2
T+++YRAYY++L
Sbjct: 116 TSIIYRAYYKIL 127
>ref|XP_006575022.1| PREDICTED: uncharacterized protein LOC100811786 isoform X2 [Glycine
max]
Length = 426
Score = 59.7 bits (143), Expect = 5e-07
Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Frame = -3
Query: 394 MAC---YQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQ 224
MAC YQF HS WR + F RH + + C NL TP L S + KGY
Sbjct: 1 MACCYKYQFLFLHSHSFWRKLP-FPRHVTASGFTC-NLQTPSLLLSSRSRAL-LSKGY-- 55
Query: 223 VSCSLKSDVSGAAYDTSPNSNISDP------VGNDQIPRQGLRFDFAHSKDRSVNVDTSN 62
C S+ GA T ++ S +G Q L+ A + + N + N
Sbjct: 56 --CRATSESPGAVPATPRSAAASGTLIPEAGIGIGTGTAQALQSGSAGNAELVTNAEPLN 113
Query: 61 GRVMLIDGTAVMYRAYYRLL 2
GRVM+IDGT++++RAYY+LL
Sbjct: 114 GRVMIIDGTSIIHRAYYKLL 133
>ref|XP_004505167.1| PREDICTED: DNA polymerase I-like isoform X2 [Cicer arietinum]
Length = 424
Score = 59.7 bits (143), Expect = 5e-07
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Frame = -3
Query: 388 CYQFSSHQIHS--LWRTVKYFGRHFSETQKA---CVNLVTPKKLYPVYSPSTCFKKGYGQ 224
CY+++ +HS LWR V + R T A N +TPK L S + KGY
Sbjct: 4 CYKYNYFFLHSHFLWRRVPFPLRRVHGTATAGNYSRNFLTPKFLL---SSRSQVSKGY-- 58
Query: 223 VSCSLKSDVSGAAYDTSPN-----SNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNG 59
+ +L S G TSPN S IS + ++ + + + N D+ NG
Sbjct: 59 CTATLDSHGDGVVSATSPNTATLVSEISYGAA------EAVQLGSFSNAEAAANSDSFNG 112
Query: 58 RVMLIDGTAVMYRAYYRLL 2
RVMLIDGTAV++RAYY+LL
Sbjct: 113 RVMLIDGTAVIHRAYYKLL 131
>ref|XP_004505166.1| PREDICTED: DNA polymerase I-like isoform X1 [Cicer arietinum]
Length = 494
Score = 59.7 bits (143), Expect = 5e-07
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Frame = -3
Query: 388 CYQFSSHQIHS--LWRTVKYFGRHFSETQKA---CVNLVTPKKLYPVYSPSTCFKKGYGQ 224
CY+++ +HS LWR V + R T A N +TPK L S + KGY
Sbjct: 4 CYKYNYFFLHSHFLWRRVPFPLRRVHGTATAGNYSRNFLTPKFLL---SSRSQVSKGY-- 58
Query: 223 VSCSLKSDVSGAAYDTSPN-----SNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNG 59
+ +L S G TSPN S IS + ++ + + + N D+ NG
Sbjct: 59 CTATLDSHGDGVVSATSPNTATLVSEISYGAA------EAVQLGSFSNAEAAANSDSFNG 112
Query: 58 RVMLIDGTAVMYRAYYRLL 2
RVMLIDGTAV++RAYY+LL
Sbjct: 113 RVMLIDGTAVIHRAYYKLL 131
>ref|XP_003520177.1| PREDICTED: uncharacterized protein LOC100811786 isoform X1 [Glycine
max]
Length = 444
Score = 59.7 bits (143), Expect = 5e-07
Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Frame = -3
Query: 394 MAC---YQFSSHQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQ 224
MAC YQF HS WR + F RH + + C NL TP L S + KGY
Sbjct: 1 MACCYKYQFLFLHSHSFWRKLP-FPRHVTASGFTC-NLQTPSLLLSSRSRAL-LSKGY-- 55
Query: 223 VSCSLKSDVSGAAYDTSPNSNISDP------VGNDQIPRQGLRFDFAHSKDRSVNVDTSN 62
C S+ GA T ++ S +G Q L+ A + + N + N
Sbjct: 56 --CRATSESPGAVPATPRSAAASGTLIPEAGIGIGTGTAQALQSGSAGNAELVTNAEPLN 113
Query: 61 GRVMLIDGTAVMYRAYYRLL 2
GRVM+IDGT++++RAYY+LL
Sbjct: 114 GRVMIIDGTSIIHRAYYKLL 133
>ref|XP_003528494.1| PREDICTED: uncharacterized protein LOC100792557 [Glycine max]
Length = 436
Score = 55.8 bits (133), Expect = 8e-06
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 CYQFSSHQIHSLWRTVKY-FGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSCS 212
CY++ + +HS + K F H T + NL TP L +P KGY CS
Sbjct: 4 CYKYHNLFLHSHFLLRKLPFPSHVYATSFSR-NLRTPWLLRSSRAP---LSKGY----CS 55
Query: 211 LKSDVSGAAYDTSPNSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDGTA 32
S+ GA T P + + G + ++ A + +R N D NGRVM+IDGT+
Sbjct: 56 ATSESPGAVPATPPTAAATLVPGAGIGTARAMQLGSAVNAERVTNSDPLNGRVMIIDGTS 115
Query: 31 VMYRAYYRLL 2
+++RAYY+LL
Sbjct: 116 IIHRAYYKLL 125
>ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
lyrata] gi|297321959|gb|EFH52380.1| hypothetical protein
ARALYDRAFT_485561 [Arabidopsis lyrata subsp. lyrata]
Length = 454
Score = 55.8 bits (133), Expect = 8e-06
Identities = 35/123 (28%), Positives = 59/123 (47%)
Frame = -3
Query: 370 HQIHSLWRTVKYFGRHFSETQKACVNLVTPKKLYPVYSPSTCFKKGYGQVSCSLKSDVSG 191
H LWR + F R +L++P K Y +C+L + VS
Sbjct: 29 HHSRFLWRNL-CFTRRIGNLCNRNSSLISPSLARSA--------KYYCSSTCNLDAAVSE 79
Query: 190 AAYDTSPNSNISDPVGNDQIPRQGLRFDFAHSKDRSVNVDTSNGRVMLIDGTAVMYRAYY 11
+ D + + ++ D + + +++ F + + +SNGRVMLIDGT+++YRAYY
Sbjct: 80 ISNDAASGNMLTSYKSEDVVAPETIKYPFKSEERVASTAASSNGRVMLIDGTSIIYRAYY 139
Query: 10 RLL 2
+LL
Sbjct: 140 KLL 142