BLASTX nr result
ID: Catharanthus22_contig00003761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00003761
(658 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [... 189 8e-46
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra... 186 5e-45
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A... 182 8e-44
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra... 176 4e-42
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra... 176 7e-42
emb|CBI29242.3| unnamed protein product [Vitis vinifera] 176 7e-42
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like... 174 2e-41
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun... 174 2e-41
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc... 170 4e-40
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra... 167 2e-39
gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao] 164 2e-38
ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II tra... 164 3e-38
ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II tra... 164 3e-38
ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi... 161 2e-37
ref|NP_001077639.1| mediator of RNA polymerase II transcription ... 161 2e-37
ref|NP_174421.2| mediator of RNA polymerase II transcription sub... 161 2e-37
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus... 160 2e-37
gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, ... 160 3e-37
gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, ... 160 3e-37
gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, ... 160 3e-37
>gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [Prunus persica]
Length = 308
Score = 189 bits (479), Expect = 8e-46
Identities = 107/186 (57%), Positives = 128/186 (68%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G ELKREE+EQLVIKLILDR LKEEFQHTAY+TNAYV +GPL L++S G
Sbjct: 125 GSELKREEIEQLVIKLILDRSLKEEFQHTAYSTNAYVTIGPLANQVLHGKCSVKLEISSG 184
Query: 477 QKRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTE 298
Q + + I + GLE+KLDELRKE+++ GGIFPHSVLSTQQINM++AQ+P S E
Sbjct: 185 QNKVAGIKSVKRSCASSGLELKLDELRKELSSVHGGIFPHSVLSTQQINMISAQKPNSME 244
Query: 297 QLEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIE 118
LE IIGKLK EKYGS Q +KE QD I +RASK+LK++K LV +E
Sbjct: 245 LLENIIGKLKAEKYGSRILEQVNTYANSTQPED-AKEDQD-IENRASKRLKSKKHLVLVE 302
Query: 117 SSGDES 100
SS DES
Sbjct: 303 SSDDES 308
>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum tuberosum]
Length = 706
Score = 186 bits (472), Expect = 5e-45
Identities = 105/188 (55%), Positives = 130/188 (69%), Gaps = 2/188 (1%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
GP+LK++ELEQLVIKL+LD VLKEEFQHTAYATNAYV +GPL K +++S
Sbjct: 524 GPDLKKDELEQLVIKLVLDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEMSTR 583
Query: 477 QKRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTE 298
Q R S+ MK K + GL+ KLDELRKE+A+ GGIFPHSVLSTQQI+ L+ Q+PKS E
Sbjct: 584 QSRTSSSMKSSKRERSTGLDDKLDELRKELASIHGGIFPHSVLSTQQISTLSGQKPKSIE 643
Query: 297 QLEKIIGKLKTEKYGSXXXXXXXXXXXKNQ--AAGISKEKQDSISSRASKKLKTEKSLVF 124
+LEKIIGKLKTEKYG Q A G + K +++ KKLKT+K+LV
Sbjct: 644 ELEKIIGKLKTEKYGDRILEEIVSYESDPQKDADGSKETKGNTV-----KKLKTKKALVV 698
Query: 123 IESSGDES 100
+ESS DE+
Sbjct: 699 LESSEDET 706
>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
gi|548857895|gb|ERN15693.1| hypothetical protein
AMTR_s00048p00224070 [Amborella trichopoda]
Length = 713
Score = 182 bits (462), Expect = 8e-44
Identities = 96/184 (52%), Positives = 125/184 (67%)
Frame = -2
Query: 654 PELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQ 475
P+LKREELEQL+++L+LDRVLKEEFQHTAY+TNAYV +GPLWK L++S
Sbjct: 529 PDLKREELEQLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQLVQGKKMVKLEISVNS 588
Query: 474 KRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
+ +K +K L GLE+KLD+ RKE+++ GGIFPH+VLSTQQI+ L+ +RP S EQ
Sbjct: 589 RGSRTNIKAVKCKHLAGLELKLDDFRKELSSCHGGIFPHAVLSTQQISTLSTERPDSLEQ 648
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIES 115
LEK+IGK KTEKYG G KE DSI R +K+ KT+K+L+ I++
Sbjct: 649 LEKLIGKTKTEKYGERILDCIRQYVETEVPNGSVKE-GDSIQHRPTKRAKTKKALINIDT 707
Query: 114 SGDE 103
S DE
Sbjct: 708 SEDE 711
>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum lycopersicum]
Length = 708
Score = 176 bits (447), Expect = 4e-42
Identities = 105/190 (55%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVL-KEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSG 481
GP+LK++ELEQLVIKL+ VL KEEFQHTAYATNAYV +GPL K +++S
Sbjct: 524 GPDLKKDELEQLVIKLLRASVLHKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVELST 583
Query: 480 GQKRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKST 301
Q R S+ MK K + GL KLDELRKE+A+ GGIFPHSVLSTQQI+ L+AQ+PKS
Sbjct: 584 RQTRTSSSMKSSKRERSTGLNDKLDELRKELASIHGGIFPHSVLSTQQISTLSAQKPKSI 643
Query: 300 EQLEKIIGKLKTEKYGS---XXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSL 130
E+LEKIIGKLKTEKYG KN A G + K +++ KKLKT+K+L
Sbjct: 644 EELEKIIGKLKTEKYGGRILEEIASYESDPQKNNADGSKETKGNTV-----KKLKTKKTL 698
Query: 129 VFIESSGDES 100
V +ESS DE+
Sbjct: 699 VVLESSEDET 708
>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Fragaria vesca subsp. vesca]
Length = 708
Score = 176 bits (445), Expect = 7e-42
Identities = 103/186 (55%), Positives = 127/186 (68%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G ELKREE+EQLVI+LIL RVLKEEFQHTAY+TNAYV LGPL K L++S G
Sbjct: 526 GSELKREEIEQLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAKQVLQGRSSVKLEMSTG 585
Query: 477 QKRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTE 298
QK+ + + + LE KLDELRKE+++ GGIFPHSVLSTQQI+M++ Q+P S E
Sbjct: 586 QKKVAGVRSVKRSRASSCLEQKLDELRKELSSDHGGIFPHSVLSTQQISMIDDQKPNSME 645
Query: 297 QLEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIE 118
QLEKIIGK+KTEKYGS Q KE+Q++ R+SK+LK + L+ IE
Sbjct: 646 QLEKIIGKVKTEKYGSRILEQVSMYADAKQPVE-DKEEQET-ERRSSKRLKNTEPLL-IE 702
Query: 117 SSGDES 100
SS DES
Sbjct: 703 SSDDES 708
>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 176 bits (445), Expect = 7e-42
Identities = 96/187 (51%), Positives = 126/187 (67%), Gaps = 1/187 (0%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G +L++EE+E LVI+LI DRVLKEEFQHTAYATNAYV LG LWK L++S
Sbjct: 524 GSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTK 583
Query: 477 QKRGSNIMKQLKHNKLC-GLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKST 301
K + MK K + GLE+KLDELRKE++++ GGIFPHSVLSTQQI++L+AQ+P S
Sbjct: 584 VKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSI 643
Query: 300 EQLEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFI 121
+ + +IGKLKTEKYGS Q + + + +RA K+LK+ K++V I
Sbjct: 644 LEAKTMIGKLKTEKYGSKILEEIAKYTETEQPENVPPDDRQGSENRAPKRLKSNKAVVLI 703
Query: 120 ESSGDES 100
ESSGDE+
Sbjct: 704 ESSGDET 710
>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
Length = 711
Score = 174 bits (441), Expect = 2e-41
Identities = 98/188 (52%), Positives = 127/188 (67%), Gaps = 2/188 (1%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G +L++EE+E LVI+LI DRVLKEEFQHTAYATNAYV LG LWK L++S
Sbjct: 524 GSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTK 583
Query: 477 QKRGSNIMKQLKHNKLC-GLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKST 301
K + MK K + GLE+KLDELRKE++++ GGIFPHSVLSTQQI++L+AQ+P S
Sbjct: 584 VKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSI 643
Query: 300 EQLEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAG-ISKEKQDSISSRASKKLKTEKSLVF 124
+LE +IGKLKTEKYGS Q + ++ +RA K+LK+ K++V
Sbjct: 644 LELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPKRLKSNKAVVL 703
Query: 123 IESSGDES 100
IESSGDE+
Sbjct: 704 IESSGDET 711
>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
[Ricinus communis]
Length = 714
Score = 174 bits (441), Expect = 2e-41
Identities = 98/186 (52%), Positives = 124/186 (66%), Gaps = 1/186 (0%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G +LKREE+EQLVI+LILD V KEEFQHTAYATNAYV GPL K L++S
Sbjct: 531 GADLKREEIEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEISNK 590
Query: 477 QKRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTE 298
Q + + K + L GLE KLD+LRKE++ GI PHSVLS+QQ++M++AQ+P STE
Sbjct: 591 QNKDGKMNKAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMISAQKPNSTE 650
Query: 297 QLEKIIGKLKTEKYGSXXXXXXXXXXXKNQA-AGISKEKQDSISSRASKKLKTEKSLVFI 121
+LEKIIGKLKTE+YG+ N++ GI + + R SK+LKT+K LV I
Sbjct: 651 ELEKIIGKLKTERYGNRILEEIKKFAGSNESDNGILND--EGSKRRPSKRLKTKKDLVLI 708
Query: 120 ESSGDE 103
ESS DE
Sbjct: 709 ESSDDE 714
>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| DNA helicase family protein
[Populus trichocarpa]
Length = 718
Score = 170 bits (430), Expect = 4e-40
Identities = 93/191 (48%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G ++K+EE+EQLVI+LILD V KEE+QHTAYATNAYV +GPL L++S
Sbjct: 527 GSDIKKEEMEQLVIQLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISSK 586
Query: 477 QKRGSNIMKQLKHN-KLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKST 301
QK + MK KH+ GLE+KLDELR+++++ GGIFPHSVLS+QQ++M+++Q+P S
Sbjct: 587 QKNKGDSMKSAKHSLAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSSA 646
Query: 300 EQ-----LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEK 136
++ LEKIIGKLKTEKYGS +++ +RASK+LKT+K
Sbjct: 647 QEASPYHLEKIIGKLKTEKYGSKILDEIKKYTGSEPPDNGMLNEEEGSGNRASKRLKTKK 706
Query: 135 SLVFIESSGDE 103
+V IESS +E
Sbjct: 707 GIVVIESSDEE 717
>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cicer arietinum]
Length = 704
Score = 167 bits (424), Expect = 2e-39
Identities = 94/187 (50%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G +LKREE+EQL++ L+LDR LKEEFQHTAY+TNAY+ +GPL K L+VS
Sbjct: 525 GSDLKREEMEQLILHLLLDRALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEVSTE 584
Query: 477 QKRGSNI-MKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKST 301
+K +++ +K+ + GLE+KLDELRKE+++ GGI PHSVLSTQQI++L +Q+P S
Sbjct: 585 KKTKASVRLKRCLGSS--GLELKLDELRKELSSIHGGILPHSVLSTQQISLLCSQKPNSL 642
Query: 300 EQLEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFI 121
EQLEK+IGKLKTEKYG+ + + + RA+K+ KT+K+LV I
Sbjct: 643 EQLEKVIGKLKTEKYGNKILEQIV------KYSDFKPTDEQVSDGRAAKRSKTKKNLVLI 696
Query: 120 ESSGDES 100
ESSGDE+
Sbjct: 697 ESSGDEA 703
>gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
Length = 709
Score = 164 bits (415), Expect = 2e-38
Identities = 94/185 (50%), Positives = 119/185 (64%), Gaps = 2/185 (1%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQK 472
+LKREELEQLV++LILDRVLKE+FQHTAYATNAY+ +G ++V+G K
Sbjct: 525 KLKREELEQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEVAGRSK 584
Query: 471 RGSNIMKQLKHNKLCGLEVKLDELRKEIATS-DGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
+ K +KH GLE KLDELRKE+A+S +G IFPHSVLS QQI++++ ++P STE+
Sbjct: 585 VMDSYRKSIKHGVTSGLEFKLDELRKELASSHNGEIFPHSVLSGQQISIISTKKPSSTEE 644
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKT-EKSLVFIE 118
LE IIGKLKTEKYG Q E++ R KKLKT E+ +V E
Sbjct: 645 LEMIIGKLKTEKYGDRILGEVKKYGIAEQLNDNVLEEEQGTEKRPRKKLKTKEEVVVLTE 704
Query: 117 SSGDE 103
SS DE
Sbjct: 705 SSNDE 709
>ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 237
Score = 164 bits (414), Expect = 3e-38
Identities = 92/184 (50%), Positives = 124/184 (67%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQK 472
+L++EE+EQL+I+L+LDRVLKEEFQHTAYATNAYV +GPL + +++SG QK
Sbjct: 56 DLRKEEIEQLIIQLLLDRVLKEEFQHTAYATNAYVTVGPLARQVLQGKKVVKIEISGKQK 115
Query: 471 RGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQL 292
+ + + K GLE KLD+LRKE+A+ DGGIFPHSVLSTQQI +L+AQ+P S +QL
Sbjct: 116 V-TGVKSKRKSVAPSGLECKLDKLRKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQL 174
Query: 291 EKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIESS 112
E +IGK+K EKYG Q S+E+Q+ +R K+ KT + V IESS
Sbjct: 175 ETMIGKVKAEKYGD-RILEEIEKWSIGQNPNASEEEQEEDENRTPKRPKTIDTHVVIESS 233
Query: 111 GDES 100
+E+
Sbjct: 234 DEEA 237
>ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 738
Score = 164 bits (414), Expect = 3e-38
Identities = 92/184 (50%), Positives = 124/184 (67%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQK 472
+L++EE+EQL+I+L+LDRVLKEEFQHTAYATNAYV +GPL + +++SG QK
Sbjct: 557 DLRKEEIEQLIIQLLLDRVLKEEFQHTAYATNAYVTVGPLARQVLQGKKVVKIEISGKQK 616
Query: 471 RGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQL 292
+ + + K GLE KLD+LRKE+A+ DGGIFPHSVLSTQQI +L+AQ+P S +QL
Sbjct: 617 V-TGVKSKRKSVAPSGLECKLDKLRKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQL 675
Query: 291 EKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIESS 112
E +IGK+K EKYG Q S+E+Q+ +R K+ KT + V IESS
Sbjct: 676 ETMIGKVKAEKYGD-RILEEIEKWSIGQNPNASEEEQEEDENRTPKRPKTIDTHVVIESS 734
Query: 111 GDES 100
+E+
Sbjct: 735 DEEA 738
>ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi|297339688|gb|EFH70105.1|
RECQL2 [Arabidopsis lyrata subsp. lyrata]
Length = 704
Score = 161 bits (407), Expect = 2e-37
Identities = 85/183 (46%), Positives = 118/183 (64%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQK 472
ELKR+E+E LVIKLI+D VLKEEFQHT Y+TNAYV +GPL ++ S Q
Sbjct: 525 ELKRDEIEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQT 584
Query: 471 RGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQL 292
+ K + GLE+ LDELRKEI+ +DG I PH+VLSTQQI+++++Q+P S ++L
Sbjct: 585 K-----KPKRSLSFSGLELNLDELRKEISAADGSILPHTVLSTQQISLISSQKPVSLQEL 639
Query: 291 EKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIESS 112
E IIGKLKTEKYG ++ K+++ +SR+ K+ KT+K + +ESS
Sbjct: 640 ESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCNSRSRKRAKTQKDAILVESS 699
Query: 111 GDE 103
G+E
Sbjct: 700 GEE 702
>ref|NP_001077639.1| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
thaliana] gi|332193226|gb|AEE31347.1| mediator of RNA
polymerase II transcription subunit 34 [Arabidopsis
thaliana]
Length = 580
Score = 161 bits (407), Expect = 2e-37
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQK 472
ELKR+E+E LVIKLI+D VLKEEFQHT Y+TNAYV +GPL ++ S Q
Sbjct: 401 ELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQT 460
Query: 471 RGSNIMKQLKHN-KLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
K+LK + GLE+KLDELRKEI+ +DG I PH+VLSTQQI +++Q+P S ++
Sbjct: 461 ------KKLKRSITFSGLELKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSLQE 514
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIES 115
LE IIGKLKTEKYG ++ K+++ SR K+ KT+K +V +ES
Sbjct: 515 LESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVES 574
Query: 114 SGDE 103
SG+E
Sbjct: 575 SGEE 578
>ref|NP_174421.2| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
thaliana] gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2 gi|11121445|emb|CAC14866.1| DNA Helicase
[Arabidopsis thaliana] gi|332193225|gb|AEE31346.1|
mediator of RNA polymerase II transcription subunit 34
[Arabidopsis thaliana]
Length = 705
Score = 161 bits (407), Expect = 2e-37
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGGQK 472
ELKR+E+E LVIKLI+D VLKEEFQHT Y+TNAYV +GPL ++ S Q
Sbjct: 526 ELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQT 585
Query: 471 RGSNIMKQLKHN-KLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
K+LK + GLE+KLDELRKEI+ +DG I PH+VLSTQQI +++Q+P S ++
Sbjct: 586 ------KKLKRSITFSGLELKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSLQE 639
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIES 115
LE IIGKLKTEKYG ++ K+++ SR K+ KT+K +V +ES
Sbjct: 640 LESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVES 699
Query: 114 SGDE 103
SG+E
Sbjct: 700 SGEE 703
>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
Length = 702
Score = 160 bits (406), Expect = 2e-37
Identities = 90/185 (48%), Positives = 123/185 (66%)
Frame = -2
Query: 657 GPELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVSGG 478
G ELKRE+ EQL++ L+L R LKEEFQHTAYATNAY+A+GPL K L++
Sbjct: 522 GSELKREDNEQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAKQILQGKKSVTLEIYTE 581
Query: 477 QKRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTE 298
+ + + + + LE+KLDELRKE++++ GGI PHSVLST+QI++L++Q+P S E
Sbjct: 582 HRTKAALRSVKRSLESSDLELKLDELRKELSSAHGGILPHSVLSTEQISLLSSQKPNSLE 641
Query: 297 QLEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEKSLVFIE 118
QLEK+IGKLKTEKYG+ +KQ++ RA+K+ KT+K+LV IE
Sbjct: 642 QLEKVIGKLKTEKYGNRILQQIEKYSDSELT-----DKQET-DGRAAKRSKTKKNLVLIE 695
Query: 117 SSGDE 103
SS DE
Sbjct: 696 SSEDE 700
>gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group] gi|215701406|dbj|BAG92830.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 665
Score = 160 bits (405), Expect = 3e-37
Identities = 91/187 (48%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVS-GGQ 475
+LK+E +EQLV++LILDRVLKEEFQHTAYATNAYVALGPLWK L V+ Q
Sbjct: 489 DLKKEGIEQLVVQLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQ 548
Query: 474 KRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
+GS K+ K N++ LE KLD+LR+E+++S+GG+FPH+VLS QQI++LN Q+P + +
Sbjct: 549 DKGSG-SKRTKRNQMSNLEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE 607
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEK-SLVFIE 118
LEK+IGK+KT KYGS A G + ASK+ K +K ++ +E
Sbjct: 608 LEKLIGKVKTGKYGSAIIELMLLHIDSEVAGG---------KACASKRQKKDKEDVICVE 658
Query: 117 SSGDESL 97
SS +E +
Sbjct: 659 SSEEEDV 665
>gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 160 bits (405), Expect = 3e-37
Identities = 91/187 (48%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVS-GGQ 475
+LK+E +EQLV++LILDRVLKEEFQHTAYATNAYVALGPLWK L V+ Q
Sbjct: 531 DLKKEGIEQLVVQLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQ 590
Query: 474 KRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
+GS K+ K N++ LE KLD+LR+E+++S+GG+FPH+VLS QQI++LN Q+P + +
Sbjct: 591 DKGSG-SKRTKRNQMSNLEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE 649
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEK-SLVFIE 118
LEK+IGK+KT KYGS A G + ASK+ K +K ++ +E
Sbjct: 650 LEKLIGKVKTGKYGSAIIELMLLHIDSEVAGG---------KACASKRQKKDKEDVICVE 700
Query: 117 SSGDESL 97
SS +E +
Sbjct: 701 SSEEEDV 707
>gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 766
Score = 160 bits (405), Expect = 3e-37
Identities = 91/187 (48%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Frame = -2
Query: 651 ELKREELEQLVIKLILDRVLKEEFQHTAYATNAYVALGPLWKHXXXXXXXXXLDVS-GGQ 475
+LK+E +EQLV++LILDRVLKEEFQHTAYATNAYVALGPLWK L V+ Q
Sbjct: 590 DLKKEGIEQLVVQLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQ 649
Query: 474 KRGSNIMKQLKHNKLCGLEVKLDELRKEIATSDGGIFPHSVLSTQQINMLNAQRPKSTEQ 295
+GS K+ K N++ LE KLD+LR+E+++S+GG+FPH+VLS QQI++LN Q+P + +
Sbjct: 650 DKGSG-SKRTKRNQMSNLEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE 708
Query: 294 LEKIIGKLKTEKYGSXXXXXXXXXXXKNQAAGISKEKQDSISSRASKKLKTEK-SLVFIE 118
LEK+IGK+KT KYGS A G + ASK+ K +K ++ +E
Sbjct: 709 LEKLIGKVKTGKYGSAIIELMLLHIDSEVAGG---------KACASKRQKKDKEDVICVE 759
Query: 117 SSGDESL 97
SS +E +
Sbjct: 760 SSEEEDV 766