BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00003581
         (3555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   822   0.0  
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   778   0.0  
ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutr...   803   0.0  
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   778   0.0  
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   778   0.0  
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   781   0.0  
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   778   0.0  
ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Caps...   800   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   802   0.0  
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   798   0.0  
ref|XP_006338519.1| PREDICTED: chloroplastic group IIA intron sp...   858   0.0  
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   858   0.0  
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   851   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              846   0.0  
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   846   0.0  
gb|EMJ18282.1| hypothetical protein PRUPE_ppa000515mg [Prunus pe...   824   0.0  
gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitat...   817   0.0  
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...   810   0.0  
ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297...   805   0.0  
gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]       804   0.0  

>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  822 bits (2124), Expect(2) = 0.0
 Identities = 435/687 (63%), Positives = 512/687 (74%), Gaps = 14/687 (2%)
 Frame = -2

Query: 3302 KNSAVSPDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSS-PGEIFVPLP 3126
            K+S     ++++T+P SAIQRIA+KLRSLG+ E   + +  T N+  T    GEIF+PLP
Sbjct: 38   KSSITIHCSNSKTVPSSAIQRIADKLRSLGFAEH--NPEPHTRNSAETKQREGEIFIPLP 95

Query: 3125 TQLPKYRVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTL 2946
             +L KYRVGHT D SWSTPENPVP PGSGNAI RYHELR  V KE+  E  K++  VPTL
Sbjct: 96   NELSKYRVGHTLDPSWSTPENPVPRPGSGNAILRYHELRKQVKKER--EDKKREAKVPTL 153

Query: 2945 AELKLPQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMN 2766
            AEL L +EEL+RLR                ITEGIVNGIHERWR++E+VKI CED+CRMN
Sbjct: 154  AELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMN 213

Query: 2765 MRRTHDLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEV---PHNHGT 2595
            M+RTHDLLERKTGGLV+WR+GS IVLYRG +Y YPYFLS+  + N  S +     H H  
Sbjct: 214  MKRTHDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHKHND 273

Query: 2594 T-----AXXXXXXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAG 2430
            +                     NK   P LIQGVG PNRVRFQLPGEAQLAEE DSLL G
Sbjct: 274  SDKIKSCSSSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEG 333

Query: 2429 LGPRFTDWWGYEPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPC 2250
            LGPRF+DWWGYEPLPVD DLLPA+VPG+++PFRLLPYG+ P LTNDEMT LKRLGRPLPC
Sbjct: 334  LGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRPLPC 393

Query: 2249 HFALGRNRKLQGLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDR 2070
            HF LGRNRKLQGLAA+IIKLWEKCEIAKIA+KRGVQNTNSE+MAEELK LTGG LLSRDR
Sbjct: 394  HFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLSRDR 453

Query: 2069 EFIVLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQ-----QTSGQV 1905
            EFIVLYRGKDFLP+AVSSAI+ERR +     ++ TD +       E E        SG  
Sbjct: 454  EFIVLYRGKDFLPSAVSSAIKERRNHVFNVAKERTDNSTSAETAKEAEDVEDGTSNSGSQ 513

Query: 1904 CEYEKNRKDQKFELSSEERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQ 1725
             E+  N  +Q ++L S++R+L  T+ A+ RTS                    EN E+SQQ
Sbjct: 514  DEFHGN-NEQSYDL-SKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLAEIENSEMSQQ 571

Query: 1724 PDVDKEGITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRS 1545
            P++DKEGIT++E+YMLRK+GL MKPFLL+GRRGVF GT+ENMHLHWKYRELVKII   RS
Sbjct: 572  PEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKERS 631

Query: 1544 MEEVHVVARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRS 1365
            +  VH VA++LEAESGGILVAVERVSKGYAI+VYRGKNY RPA LRP +LL+KR+AMKRS
Sbjct: 632  LNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMKRS 691

Query: 1364 IEAQRRESLKVHVLKLSQNIDDLKLQL 1284
            +EAQRRESLK+HVL+L++NI+DLKL+L
Sbjct: 692  LEAQRRESLKLHVLRLTRNINDLKLKL 718



 Score =  188 bits (477), Expect(2) = 0.0
 Identities = 115/273 (42%), Positives = 166/273 (60%), Gaps = 20/273 (7%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFPSPDFQTD----ITVYESAHLPKLDTEEKI-IMNGESR 1015
            G  E +S S  L+  S +S++   PD Q        +Y+   + K + E     ++ E+ 
Sbjct: 726  GRSEFESLSISLSKESHASVNIIQPDEQASQINPSLLYDGIRIGKNEPESSSESLSKETH 785

Query: 1014 VTSFSSDSSKTCRQTSLSATSDAKPR-----------LNDIKTMESSTDSPKS--DSRLS 874
             + F++ +      TS   TS ++ R           +++ K M S+ +S  +  +  +S
Sbjct: 786  ASLFTAINGGAVDSTSFPNTSMSEERGSYPCVSAENCVHENKIMGSTVESTTTVLEESVS 845

Query: 873  VHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYP 694
            +    +N   S  + L N++RL+LRKQALKMK RP+ A+G+SN + GVA+ IK HF++YP
Sbjct: 846  ISANEDNEMQSSTICLSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFKKYP 905

Query: 693  LAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKIN 514
            LAIVNVKGRAKGTSVQEVV +LE+ TG VLVSQEPSK+ILYRGWG+ +EP   +GK   +
Sbjct: 906  LAIVNVKGRAKGTSVQEVVFQLEQATGGVLVSQEPSKVILYRGWGAFDEP-GHRGKKNAH 964

Query: 513  SS--PSAGMESKTRHVISPELISAIRLECGLQS 421
             S   S   E  +R  +SPEL++AIRLECGLQ+
Sbjct: 965  DSGKTSVVKEESSRLGMSPELMAAIRLECGLQN 997


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  778 bits (2009), Expect(2) = 0.0
 Identities = 425/740 (57%), Positives = 513/740 (69%), Gaps = 27/740 (3%)
 Frame = -2

Query: 3392 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3246
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3075
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3074 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 2907
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 2906 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2727
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2726 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2574
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2573 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2394
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2393 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2214
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2213 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2034
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2033 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 1854
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 1853 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1674
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1673 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1494
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1493 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1314
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1313 QNIDDLKLQLGKHEDGGNMD 1254
            +NI+ LKLQL K ++  +++
Sbjct: 724  RNIEKLKLQLVKDKEANSLE 743



 Score =  198 bits (503), Expect(2) = 0.0
 Identities = 119/257 (46%), Positives = 161/257 (62%), Gaps = 5/257 (1%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLPKLDTEEKIIMNGESRVTSFS 1000
            G    D  S + ND   +++D P P  Q D               E +  NG +  TS  
Sbjct: 780  GECGADLTSTESNDTGDATIDGP-PAIQQD------------KQTESLTHNGVASGTSSC 826

Query: 999  SDSS--KTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYS---SKA 835
             D+S   +  +   S+   AK R ++ + +E S +  K  S LS    T N ++   S+A
Sbjct: 827  PDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRA 886

Query: 834  VRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGT 655
            ++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK HF +YPLAIVNVKGRAKGT
Sbjct: 887  IQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGT 946

Query: 654  SVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRH 475
            SVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G+    + PS   + +   
Sbjct: 947  SVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRGRQNSRAKPSIVRDVRPWP 1005

Query: 474  VISPELISAIRLECGLQ 424
             +S EL++AI+LECGLQ
Sbjct: 1006 AVSRELLAAIKLECGLQ 1022


>ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutrema salsugineum]
            gi|557109641|gb|ESQ49948.1| hypothetical protein
            EUTSA_v10019986mg [Eutrema salsugineum]
          Length = 998

 Score =  803 bits (2074), Expect(2) = 0.0
 Identities = 436/717 (60%), Positives = 511/717 (71%), Gaps = 10/717 (1%)
 Frame = -2

Query: 3398 LFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDA-DTRTLPQSAIQRIAEKLR 3222
            +F PF VP T             L  R  + R NS V   A D +TLPQSAIQRIA+KLR
Sbjct: 24   VFPPFLVPKT-------------LISRCHVRRANSVVRSSASDRKTLPQSAIQRIADKLR 70

Query: 3221 SLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPVPEPGS 3042
            SLG+ E++ D   +T    G +SPGEIFVPLP QLP +RVGHT D+SWSTP  PVP+PGS
Sbjct: 71   SLGFAEEKHDT-KTTGEESGNNSPGEIFVPLPNQLPIHRVGHTIDTSWSTPSYPVPKPGS 129

Query: 3041 GNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLRTXXXXXXXXXXXXX 2862
            G AI RYHEL+ V  KEK  ER K +E VP+LAEL LP  EL+RLR+             
Sbjct: 130  GTAISRYHELKRVWKKEKKVER-KNEEKVPSLAELTLPPAELRRLRSAGIRLTKKLKIGK 188

Query: 2861 XXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRSGSNIVLYR 2682
              ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTHD+LE KTGGLVIWRSGS I+LYR
Sbjct: 189  AGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYR 248

Query: 2681 GADYKYPYFLSEECSRNVASEEVPHNHGTT------AXXXXXXXXXXXXXXXNKVSHPPL 2520
            G +Y+YPYF+S++   + +S E      +       +               NK+  P L
Sbjct: 249  GVNYQYPYFVSDQDLAHDSSVETASGASSMIQGVVDSRDKQSTAQSSPTSISNKMIKPLL 308

Query: 2519 IQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLLPAVVPGFRR 2340
            +QGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y+PLPVD DLLPA+VP +RR
Sbjct: 309  MQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDADLLPAIVPEYRR 368

Query: 2339 PFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLWEKCEIAKIA 2160
            PFRLLPYG++PKLT+DEMT L+RLGRPLPCHFALGRNR LQGLA AI+KLWEKCE+ KIA
Sbjct: 369  PFRLLPYGLSPKLTDDEMTTLRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCEVVKIA 428

Query: 2159 IKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIEERRKYELAN 1980
            +KRGVQNTNSELMAEELK LTGG L+SRD++FIVLYRGKDFLP+AVSSAIEERR+  +  
Sbjct: 429  VKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIM 488

Query: 1979 KRKGTDKNLPGVGENEHEQQTSGQVCEYE---KNRKDQKFELSSEERELKSTEAAVGRTS 1809
            ++     N   + +NE E Q      + E   + +KD       + R+ KS EA++ RTS
Sbjct: 489  EKSSVHGN--KLTKNEKEIQPQAPTDDIEPAAEYKKDHVQTHQMKPRQRKSPEASLERTS 546

Query: 1808 XXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPFLLLGRR 1629
                                EN E  QQ D+DKEGIT+DEKYMLRKIGL MKPFLLLGRR
Sbjct: 547  IKLSMALEKKANAEKILAELENRESPQQSDIDKEGITDDEKYMLRKIGLKMKPFLLLGRR 606

Query: 1628 GVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVSKGYAII 1449
            GVF GT+ENMHLHWKYRELVKII   +S+E    VA  LEAESGGILVAVE VSKGYAII
Sbjct: 607  GVFDGTIENMHLHWKYRELVKIICNEKSIESAREVAEILEAESGGILVAVEMVSKGYAII 666

Query: 1448 VYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQLGK 1278
            VYRGKNY RP  LRPQ+LL+KR+A+KRS+EAQRR+SLK+HVLKLS NI++L  QL K
Sbjct: 667  VYRGKNYERPPCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSDNIEELNRQLVK 723



 Score =  172 bits (437), Expect(2) = 0.0
 Identities = 112/253 (44%), Positives = 152/253 (60%), Gaps = 7/253 (2%)
 Frame = -1

Query: 1164 DSASPK-LNDASQSSLDFPSPDFQTDITVYESA--HLPKLDTEEKIIMNGESRVTSFSSD 994
            +S+ P+ L+   +S  D  S + + D +   S+  H   LD+   +   G +  +SF   
Sbjct: 754  NSSDPRVLSSGEESCEDDSSHEDREDESGSGSSQRHGNSLDSTAVLGETGSAEASSFHDR 813

Query: 993  SSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSSKAVRLPNKE 814
            S    R + L+A          + T +    S  S SR+S  T +++        L N+E
Sbjct: 814  SMP--RNSFLNAE-------RKVPTGQELGFSTGSGSRISALTESKSEKDGLVADLSNRE 864

Query: 813  RLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVL 634
            RL+LRKQALKMKKRP FA+G+SN + G+A+ +K HF R PLAIVNVKGRAKGTSVQEV+ 
Sbjct: 865  RLILRKQALKMKKRPPFAVGRSNVVTGLAKTLKIHFERNPLAIVNVKGRAKGTSVQEVIA 924

Query: 633  KLEEVTGAVLVSQEPSKIILYRGWGSQEEPKS----TKGKSKINSSPSAGMESKTRHVIS 466
            KL+E TGA+LVSQEPSK+ILYRGWG++EE KS       K+ IN +  +    K    +S
Sbjct: 925  KLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVKNSINLTSHSKRFVKDPPPVS 984

Query: 465  PELISAIRLECGL 427
            P LI AI+LECGL
Sbjct: 985  PALIQAIKLECGL 997


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  778 bits (2009), Expect(2) = 0.0
 Identities = 425/740 (57%), Positives = 513/740 (69%), Gaps = 27/740 (3%)
 Frame = -2

Query: 3392 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3246
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3075
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3074 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 2907
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 2906 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2727
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2726 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2574
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2573 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2394
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2393 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2214
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2213 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2034
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2033 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 1854
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 1853 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1674
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1673 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1494
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1493 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1314
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1313 QNIDDLKLQLGKHEDGGNMD 1254
            +NI+ LKLQL K ++  +++
Sbjct: 724  RNIEKLKLQLVKDKEANSLE 743



 Score =  196 bits (498), Expect(2) = 0.0
 Identities = 116/275 (42%), Positives = 171/275 (62%), Gaps = 23/275 (8%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKLDTEEKI-IMNGESRV 1012
            G    D  S + ND   +++D P     D QT+   +    + +++++  +  ++ ES++
Sbjct: 780  GECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISINEIESKSSLKSVSKESQL 839

Query: 1011 TSFS-------SDSSKTCRQTSL---------SATSDAKPRLNDIKTMESSTDSPKSDSR 880
               +       +  + +C   S+         S+   AK R ++ + +E S +  K  S 
Sbjct: 840  NMIADFFAEGVASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSG 899

Query: 879  LSVHTVTENGYS---SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTH 709
            LS    T N ++   S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK H
Sbjct: 900  LSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAH 959

Query: 708  FRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKG 529
            F +YPLAIVNVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G
Sbjct: 960  FEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRG 1018

Query: 528  KSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 424
            +    + PS   + +    +S EL++AI+LECGLQ
Sbjct: 1019 RQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQ 1053


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  778 bits (2009), Expect(2) = 0.0
 Identities = 425/740 (57%), Positives = 513/740 (69%), Gaps = 27/740 (3%)
 Frame = -2

Query: 3392 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3246
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3075
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3074 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 2907
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 2906 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2727
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2726 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2574
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2573 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2394
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2393 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2214
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2213 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2034
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2033 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 1854
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 1853 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1674
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1673 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1494
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1493 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1314
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1313 QNIDDLKLQLGKHEDGGNMD 1254
            +NI+ LKLQL K ++  +++
Sbjct: 724  RNIEKLKLQLVKDKEANSLE 743



 Score =  196 bits (497), Expect(2) = 0.0
 Identities = 118/261 (45%), Positives = 164/261 (62%), Gaps = 9/261 (3%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYE---SAHLPKLDTEEKIIMNGES 1018
            G    D  S + ND   +++D P     D QT+   +    S      D   + +M   +
Sbjct: 780  GECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGVASGTSSCPDNSMQEVMEYNT 839

Query: 1017 RVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYS-- 844
             V +    S    R++S+ +   AK R ++ + +E S +  K  S LS    T N ++  
Sbjct: 840  IVDAEQCSSDNEPRESSIES---AKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNEN 896

Query: 843  -SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGR 667
             S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK HF +YPLAIVNVKGR
Sbjct: 897  NSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGR 956

Query: 666  AKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMES 487
            AKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G+    + PS   + 
Sbjct: 957  AKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRGRQNSRAKPSIVRDV 1015

Query: 486  KTRHVISPELISAIRLECGLQ 424
            +    +S EL++AI+LECGLQ
Sbjct: 1016 RPWPAVSRELLAAIKLECGLQ 1036


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  781 bits (2018), Expect(2) = 0.0
 Identities = 428/740 (57%), Positives = 514/740 (69%), Gaps = 27/740 (3%)
 Frame = -2

Query: 3392 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3246
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3075
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3074 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 2907
            TPENPVP PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 2906 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2727
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2726 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2574
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2573 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2394
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2393 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2214
            P PVD DLLPA VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2213 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2034
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2033 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 1854
            P A SSAIEERRK+E +       K  P +G N H+        E+     DQ   + SE
Sbjct: 489  PPAASSAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQTSTMHSE 544

Query: 1853 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1674
            ++E +S E A+ RTS                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTS-IRLSRALEKKAEAEKLLAELEEERPEQYEVDKEGITEEERYMLR 603

Query: 1673 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1494
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1493 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1314
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1313 QNIDDLKLQLGKHEDGGNMD 1254
            +NI+ LKLQL K ++  +++
Sbjct: 724  RNIEKLKLQLVKDKEANSLE 743



 Score =  191 bits (484), Expect(2) = 0.0
 Identities = 118/276 (42%), Positives = 172/276 (62%), Gaps = 24/276 (8%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKLDTEEKI-IMNGESRV 1012
            G    D  S + ND   +++D P     D QT+   +      ++++E  +  ++ ES++
Sbjct: 780  GECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISFNEIESESSLKSVSKESQL 839

Query: 1011 TSFS-------SDSSKTCRQTSLSATSDAKPRLNDIKTMES--STDSP--------KSDS 883
               +       +  + +C   S+  +SD +PR + I++ +S  S + P        K  S
Sbjct: 840  NMIADFFAEGVASGTPSCPDNSM-CSSDNEPRESSIESAKSRSSENEPIEQCFELAKGRS 898

Query: 882  RLSVHTVTENGYS---SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKT 712
             LS    T N ++   S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK 
Sbjct: 899  GLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKA 958

Query: 711  HFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTK 532
            HF +YPLAIVNVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +
Sbjct: 959  HFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPR 1017

Query: 531  GKSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 424
            G+    +  S   + +    +S EL++AI+LECGLQ
Sbjct: 1018 GRQNSRAKLSIVRDVRPWPAVSRELLAAIKLECGLQ 1053


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  778 bits (2009), Expect(2) = 0.0
 Identities = 425/740 (57%), Positives = 513/740 (69%), Gaps = 27/740 (3%)
 Frame = -2

Query: 3392 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3246
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3075
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3074 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 2907
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 2906 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2727
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2726 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2574
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2573 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2394
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2393 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2214
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2213 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2034
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2033 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 1854
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 1853 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1674
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1673 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1494
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1493 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1314
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1313 QNIDDLKLQLGKHEDGGNMD 1254
            +NI+ LKLQL K ++  +++
Sbjct: 724  RNIEKLKLQLVKDKEANSLE 743



 Score =  194 bits (493), Expect(2) = 0.0
 Identities = 117/266 (43%), Positives = 164/266 (61%), Gaps = 14/266 (5%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKL--------DTEEKII 1033
            G    D  S + ND   +++D P     D QT+   +       +        D   + +
Sbjct: 780  GECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNDFFAEGVASGTSSCPDNSMQEV 839

Query: 1032 MNGESRVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTEN 853
            M   + V +    S    R++S+ +   AK R ++ + +E S +  K  S LS    T N
Sbjct: 840  MEYNTIVDAEQCSSDNEPRESSIES---AKSRSSENEPIEQSFELAKGRSGLSTPIGTGN 896

Query: 852  GYS---SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIV 682
             ++   S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK HF +YPLAIV
Sbjct: 897  VWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIV 956

Query: 681  NVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPS 502
            NVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G+    + PS
Sbjct: 957  NVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRGRQNSRAKPS 1015

Query: 501  AGMESKTRHVISPELISAIRLECGLQ 424
               + +    +S EL++AI+LECGLQ
Sbjct: 1016 IVRDVRPWPAVSRELLAAIKLECGLQ 1041


>ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Capsella rubella]
            gi|482565458|gb|EOA29647.1| hypothetical protein
            CARUB_v10015149mg [Capsella rubella]
          Length = 1021

 Score =  800 bits (2067), Expect(2) = 0.0
 Identities = 443/755 (58%), Positives = 520/755 (68%), Gaps = 20/755 (2%)
 Frame = -2

Query: 3431 LFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV--SPDADTRTLP 3258
            L +    +    F PF +P T             L  R  + R NS V  S  +D +TLP
Sbjct: 13   LITLPKTFPDRTFPPFPIPQT-------------LISRCNVRRANSFVVRSSSSDRKTLP 59

Query: 3257 QSAIQRIAEKLRSLGYVEDEKDKDSSTTNNK--GTSSPGEIFVPLPTQLPKYRVGHTFDS 3084
            QSAIQRIAEKLRSLG+VE+  +  +  T     G +SPGEIFVPLP QLP  RVGHT D+
Sbjct: 60   QSAIQRIAEKLRSLGFVEENHESPARNTTGVEYGKNSPGEIFVPLPKQLPINRVGHTIDT 119

Query: 3083 SWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLR 2904
            SWSTP  PVP PGSG AI RYHEL+ V  KE   ER KK+E VP+LAEL LP  EL+RLR
Sbjct: 120  SWSTPSYPVPNPGSGTAISRYHELKRVWKKETEIER-KKQEKVPSLAELTLPAAELRRLR 178

Query: 2903 TXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGG 2724
            +               ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTHD+LE KTGG
Sbjct: 179  SAGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIVCEDISRMNMKRTHDVLETKTGG 238

Query: 2723 LVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGTT------AXXXXXXXXX 2562
            LVIWRSGS I+LYRG +Y+YPYF+S+    + +S E      +       +         
Sbjct: 239  LVIWRSGSKILLYRGVNYQYPYFVSDRDLGHDSSVETASGGSSMDQEVVDSRDKQSTAES 298

Query: 2561 XXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPV 2382
                  +K   P LIQGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y+PLPV
Sbjct: 299  SSLSVTSKTVKPLLIQGVGSPDKVRFQLPGEVQLVEEADQLLEGLGPRFTDWWAYDPLPV 358

Query: 2381 DGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAA 2202
            DGDLLPAVVP +RRPFRLLPYGV+PKLT+DEMT ++RLGRPLPCHFALGRNR LQGLA A
Sbjct: 359  DGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVA 418

Query: 2201 IIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAV 2022
            I+KLWEKCE+AKIA+KRGVQNTNSELMAEELK LTGG L+SRD++FIVLYRGKDFLP AV
Sbjct: 419  IVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPFAV 478

Query: 2021 SSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYE--KNRKDQKFELSSEER 1848
            SSAIEERR+  +  +      N     E+  + Q +    E E  + +KD       + R
Sbjct: 479  SSAIEERRRQTMIMENSSAHGNKMTKNEDVIKPQAATDDTELEEAEYKKDHVQTHHMKSR 538

Query: 1847 ELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKI 1668
            + KS EA + +TS                    E+ E  QQ ++DKEGIT+DEKYMLRKI
Sbjct: 539  QRKSPEAILEKTSIKLSMALEKKANAEKILAELESRESPQQSNIDKEGITDDEKYMLRKI 598

Query: 1667 GLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGIL 1488
            GL MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII    S+E  H VA  LEAESGGIL
Sbjct: 599  GLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEHSIEAAHEVAEILEAESGGIL 658

Query: 1487 VAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQN 1308
            VAVE VSKGYAIIVYRGKNY RP+ LRPQ+LL+KR+A+KRS+EAQRR+SLK+HVLKLS N
Sbjct: 659  VAVEMVSKGYAIIVYRGKNYERPSCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNN 718

Query: 1307 IDDLKLQLGK-------HEDG-GNMDLAKASEHQL 1227
            ID+L  QL +         DG  +M + + +E+QL
Sbjct: 719  IDELNRQLVEDSVTNETRSDGESSMRMVEETENQL 753



 Score =  171 bits (434), Expect(2) = 0.0
 Identities = 111/246 (45%), Positives = 144/246 (58%), Gaps = 6/246 (2%)
 Frame = -1

Query: 1143 NDASQSSLDFPSPDFQTDITVYESAHLPK-LDTEEKIIMNGESRVTSFSSDSSKTCRQTS 967
            N+    S    S + Q D       H    LD+   I +  E+     SS   ++  Q S
Sbjct: 785  NEGEVDSFTTSSHEHQEDEPGLSQRHEGNALDSTANISVLVETGSAKASSFHDRSMPQKS 844

Query: 966  LSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSSKAVRLPNKERLLLRKQAL 787
               T    P+    + + SST S    SR+S  T  ++        L N+ERL+LRKQAL
Sbjct: 845  FLHTERKVPK----QELGSSTGS---GSRVSALTERKSKNDGLVADLSNRERLILRKQAL 897

Query: 786  KMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAV 607
            KMKKRP FA+G+SN + G+A  +K HF++ PLAIVNVKGRA+GTSVQEV+ KL+E TGA+
Sbjct: 898  KMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRAEGTSVQEVIAKLKEETGAL 957

Query: 606  LVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRHV-----ISPELISAIR 442
            LVSQEPSK+ILYRGWG++EE KS    S + +  S  + S    V     +SP LI AIR
Sbjct: 958  LVSQEPSKVILYRGWGAEEEMKSFYPNSNVKN--SINLTSSKSFVDDPPPVSPALIEAIR 1015

Query: 441  LECGLQ 424
            LECGLQ
Sbjct: 1016 LECGLQ 1021


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  802 bits (2072), Expect(2) = 0.0
 Identities = 437/758 (57%), Positives = 531/758 (70%), Gaps = 12/758 (1%)
 Frame = -2

Query: 3467 HVQMLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV 3288
            H      P  DQ   F SP+T   F P     T    P +SS+F       L C      
Sbjct: 5    HSSFTFQPLTDQ---FPSPFT---FFPSHFHPTLISRPPKSSRFL------LRCCS---- 48

Query: 3287 SPDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKY 3108
                D+ TLP+SAIQRIA+KLRSLG+ E   +      +    S+PG IFVPLP QLPKY
Sbjct: 49   ---IDSETLPKSAIQRIADKLRSLGFTESPPEP---LPDPNSPSAPGAIFVPLPNQLPKY 102

Query: 3107 RVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQE---RSKKKEYVPTLAEL 2937
            RVGHT DSSWS PENPVPEPG+G AI+R+HELR  V K K ++     K++E  P+LAEL
Sbjct: 103  RVGHTIDSSWSMPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAEL 162

Query: 2936 KLPQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRR 2757
             L +EEL RLRT               ITEGIVN IHE WR++E+VKI CED+CR+NM+R
Sbjct: 163  SLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKR 222

Query: 2756 THDLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGT------ 2595
            THDLLERKTGG+V+WRSGS I+LYRG +Y YPYF  E      + + +P +H        
Sbjct: 223  THDLLERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSE 282

Query: 2594 --TAXXXXXXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGP 2421
              +                 K+  P LIQGVG+PNRVRFQLPGEA+LAE+A+SLL GLGP
Sbjct: 283  TESTLSCINDERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGP 342

Query: 2420 RFTDWWGYEPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFA 2241
            RF+DWWGY+PLPVD DLLPA+VPG+R+PFRLLPYGV PKLTNDEMT L+RL RPLPCHFA
Sbjct: 343  RFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFA 402

Query: 2240 LGRNRKLQGLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFI 2061
            LGRNRKLQGLAA+II+LWEKCEIAKIA+KRGVQNTN++LMAEEL+LLTGG LLSRDREFI
Sbjct: 403  LGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFI 462

Query: 2060 VLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGEN-EHEQQTSGQVCEYEKNR 1884
            VLYRGKDFLP AVSSA+E++R   L ++ K TD +    G+  + E   +G   E +   
Sbjct: 463  VLYRGKDFLPFAVSSAMEQKRHMRL-HEMKQTDNSPATTGQGLKLEINENGPTNESQSIT 521

Query: 1883 KDQKFELSSEERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEG 1704
              +K  + SE R+L S+E ++ +TS                    E EE  QQP++DKEG
Sbjct: 522  GWKK--IVSERRKLMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEG 579

Query: 1703 ITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVV 1524
            IT +E+YML+K+GL MKPFLLLGRRGVF GTVENMHLHWKYRELVKIIT  RS + VH V
Sbjct: 580  ITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDV 639

Query: 1523 ARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRE 1344
            ARTLEAESGGILVAVERV + +AII++RGKNY RP+ LRP+SLLNK++A+KRSIEAQRR+
Sbjct: 640  ARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRK 699

Query: 1343 SLKVHVLKLSQNIDDLKLQLGKHEDGGNMDLAKASEHQ 1230
            SLK+HVLKL+QN+++LKL+L + +    M+  K S  Q
Sbjct: 700  SLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQ 737



 Score =  168 bits (425), Expect(2) = 0.0
 Identities = 115/264 (43%), Positives = 152/264 (57%), Gaps = 10/264 (3%)
 Frame = -1

Query: 1185 VTGSHETDSASPKLNDASQSSLDFPSPDF------QTDITVYESAHLPKLDTEEKIIMNG 1024
            V   H T S+     D S + L   +  F      Q++ TV  S    +     K+ M+ 
Sbjct: 778  VKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQGNHAKVPMDT 837

Query: 1023 ESRVTSFSSDS-SKTCRQTSLSATSDAKPRLNDIKTMESST--DSPKSDSRLSVHTVTEN 853
             +   +    S + +    S S TSDA   +   K  + S   +  KS   LS   + + 
Sbjct: 838  NAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEKSPPLLSSTRINQP 897

Query: 852  GYSSKAV-RLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNV 676
            GY    V +L NKERLLLR+QALKMKK P+ ++GKSN I GVA+AIK HF+++ LAIVNV
Sbjct: 898  GYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNV 957

Query: 675  KGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAG 496
            KGRAKGTSVQE+V KLE+ TGAVLVSQEPSK+ILYRGW  +EE +  K     NS     
Sbjct: 958  KGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGW--EEEDRKQKATMMKNS----- 1010

Query: 495  MESKTRHVISPELISAIRLECGLQ 424
               + R  +S EL++AIR+ECGL+
Sbjct: 1011 --GEDRLSMSSELMAAIRIECGLR 1032


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  798 bits (2060), Expect(2) = 0.0
 Identities = 432/746 (57%), Positives = 529/746 (70%), Gaps = 16/746 (2%)
 Frame = -2

Query: 3419 RSPYTKTLFNPFSVPATFFIFPNRSSKFQ---HLQPRHLLCRKNSAVSPDADTRTLPQSA 3249
            R+  +  L +PFS   T  + P+ SS      H  P  L   +        D+ TLP+SA
Sbjct: 21   RASSSSPLHSPFST--TNSLHPSPSSHLTSTPHSSPVLLKSSRFLLRCCSIDSETLPKSA 78

Query: 3248 IQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTP 3069
            IQRIA+KLRSLG+ E       +  +    S+PG IFVPLP QLPKYRVGHT DSSWSTP
Sbjct: 79   IQRIADKLRSLGFTEXTP---RTLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWSTP 135

Query: 3068 ENPVPEPGSGNAIQRYHELRNVVIKEKIQE---RSKKKEYVPTLAELKLPQEELKRLRTX 2898
            ENPVPEPG+G AI+R+HELR  V K K ++     K++E  P+LAEL L +EEL RLRT 
Sbjct: 136  ENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLRTI 195

Query: 2897 XXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLV 2718
                          ITEGIVN IHE WR++E+VKI CED+CR+NM+RTHDLLERKTGG+V
Sbjct: 196  GIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIV 255

Query: 2717 IWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGT--------TAXXXXXXXXX 2562
            +WRSGS I+LYRG +Y YPYF  E      + + +P +H          +          
Sbjct: 256  VWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERS 315

Query: 2561 XXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPV 2382
                   K+  P LIQGVG+PNRVRFQLPGEA+LAE+A+SLL GLGPRF+DWWGY+PLPV
Sbjct: 316  AGPTSYVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPV 375

Query: 2381 DGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAA 2202
            D DLLPA+VPG+R+PFRLLPYGV PKLTNDEMT L+RL RPLPCHFALGRNRKLQGLAA+
Sbjct: 376  DADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAAS 435

Query: 2201 IIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAV 2022
            II+LWEKCEIAKIA+KRGVQNTN++LMAEEL+LLTGG LLSRDREFIVLYRGKDFLP AV
Sbjct: 436  IIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAV 495

Query: 2021 SSAIEERRKYELANKRKGTDKNLPGVGEN-EHEQQTSGQVCEYEKNRKDQKFELSSEERE 1845
            SSA+E++R   L ++ K TD +    G+  + E   +G   E +     +K  + SE R+
Sbjct: 496  SSAMEQKRHMRL-HEMKQTDNSPATTGQGLKLEINENGPTNESQSITGWKK--IVSERRK 552

Query: 1844 LKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEIS-QQPDVDKEGITEDEKYMLRKI 1668
            L S+E ++ +TS                      EE   QQP++DKEGIT +E+YML+K+
Sbjct: 553  LMSSETSMRKTSIKLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKV 612

Query: 1667 GLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGIL 1488
            GL MKPFLLLGRRGVF GTVENMHLHWKYRELVKIIT  RS + VH VARTLEAESGGIL
Sbjct: 613  GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGIL 672

Query: 1487 VAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQN 1308
            VAVERV + +AII++RGKNY RP+ LRP+SLLNK++A+KRSIEAQRR+SLK+HVLKL+QN
Sbjct: 673  VAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQN 732

Query: 1307 IDDLKLQLGKHEDGGNMDLAKASEHQ 1230
            +++LKL+L + +    M+  K S  Q
Sbjct: 733  VEELKLKLDEDKRAIGMESIKTSTFQ 758



 Score =  168 bits (425), Expect(2) = 0.0
 Identities = 115/264 (43%), Positives = 152/264 (57%), Gaps = 10/264 (3%)
 Frame = -1

Query: 1185 VTGSHETDSASPKLNDASQSSLDFPSPDF------QTDITVYESAHLPKLDTEEKIIMNG 1024
            V   H T S+     D S + L   +  F      Q++ TV  S    +     K+ M+ 
Sbjct: 799  VKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQGNHAKVPMDT 858

Query: 1023 ESRVTSFSSDS-SKTCRQTSLSATSDAKPRLNDIKTMESST--DSPKSDSRLSVHTVTEN 853
             +   +    S + +    S S TSDA   +   K  + S   +  KS   LS   + + 
Sbjct: 859  NAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEKSPPLLSSTRINQP 918

Query: 852  GYSSKAV-RLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNV 676
            GY    V +L NKERLLLR+QALKMKK P+ ++GKSN I GVA+AIK HF+++ LAIVNV
Sbjct: 919  GYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNV 978

Query: 675  KGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAG 496
            KGRAKGTSVQE+V KLE+ TGAVLVSQEPSK+ILYRGW  +EE +  K     NS     
Sbjct: 979  KGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGW--EEEDRKQKATMMKNS----- 1031

Query: 495  MESKTRHVISPELISAIRLECGLQ 424
               + R  +S EL++AIR+ECGL+
Sbjct: 1032 --GEDRLSMSSELMAAIRIECGLR 1053


>ref|XP_006338519.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 878

 Score =  858 bits (2217), Expect = 0.0
 Identities = 455/726 (62%), Positives = 544/726 (74%), Gaps = 13/726 (1%)
 Frame = -2

Query: 3407 TKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAIQRIAEK 3228
            +KTL NP    + F   P+ S K     PR+ L     A SPD  T  LP+SAI+RIA+K
Sbjct: 14   SKTLLNPSPSHSLFSTTPSFSLK--PFFPRNTL--PVFATSPD--TEALPESAIRRIADK 67

Query: 3227 LRSLGYVEDEKDKDS---STTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPV 3057
            LRSLG+VE+ K++++   + ++N   +SPG+IFVPLPTQLPKYRVGHT D+SWSTPENPV
Sbjct: 68   LRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPENPV 127

Query: 3056 PEPGSGNAIQRYHELRNVVIKEKIQERSKKKEY----VPTLAELKLPQEELKRLRTXXXX 2889
            P+PG GN+IQ++HELR+  +KEK +ER K KEY     P+LAEL LP EEL+RLRT    
Sbjct: 128  PQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPAEELRRLRTVGIA 187

Query: 2888 XXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWR 2709
                       ITEGIVNGIHERWR+ ELVKI CEDICR+NM+RTH+LLE+KTGGLVIWR
Sbjct: 188  LRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVIWR 247

Query: 2708 SGSNIVLYRGADYKYPYFLSEECSRNVASEEVP------HNHGTTAXXXXXXXXXXXXXX 2547
            SGSNI+LYRGADYKYPYF       N A +  P        H T +              
Sbjct: 248  SGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMGTEEHMTNSSGTDVVKPDASD-- 305

Query: 2546 XNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLL 2367
              + S P +IQGVGSP+RVRF+LPGEA+  EEAD LL GLGPRFTDWWG EPLP+D DLL
Sbjct: 306  --RKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLL 363

Query: 2366 PAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLW 2187
            PA+VPG++RPFRLLPYGV PKLTNDEMT L+RLGRPLPCHF LGRNRKLQGLAAAI+KLW
Sbjct: 364  PAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLW 423

Query: 2186 EKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIE 2007
            EKCEIAK+A+KRGVQNTNSELMAEELK LTGG LLSRDREFIV YRGKDFLP+AVSSAIE
Sbjct: 424  EKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIE 483

Query: 2006 ERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTEA 1827
            ERRK ++  + K    N       E +Q T+G V +    R++ +  +  E+++L S EA
Sbjct: 484  ERRK-QVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHARRNNQKGV-QEKKKLTSMEA 541

Query: 1826 AVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPF 1647
            A+ RT+                    E +E+ QQ D+DKEGITE+E++MLRKIGL MKPF
Sbjct: 542  AIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPF 601

Query: 1646 LLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVS 1467
            LLLGRRGVF GTVENMHLHWKYRELVK+ITG +++EEVH +AR LEAESGGILVAVE V+
Sbjct: 602  LLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELVN 661

Query: 1466 KGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQ 1287
            KG+AIIVYRGKNY RPASLRPQ+LL+KR+AMKRSIEAQRR+SLK+HVLKL+QNI+ L+ +
Sbjct: 662  KGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSR 721

Query: 1286 LGKHED 1269
            L K+E+
Sbjct: 722  LAKNEE 727


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  858 bits (2217), Expect = 0.0
 Identities = 455/726 (62%), Positives = 544/726 (74%), Gaps = 13/726 (1%)
 Frame = -2

Query: 3407 TKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAIQRIAEK 3228
            +KTL NP    + F   P+ S K     PR+ L     A SPD  T  LP+SAI+RIA+K
Sbjct: 14   SKTLLNPSPSHSLFSTTPSFSLK--PFFPRNTL--PVFATSPD--TEALPESAIRRIADK 67

Query: 3227 LRSLGYVEDEKDKDS---STTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPV 3057
            LRSLG+VE+ K++++   + ++N   +SPG+IFVPLPTQLPKYRVGHT D+SWSTPENPV
Sbjct: 68   LRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPENPV 127

Query: 3056 PEPGSGNAIQRYHELRNVVIKEKIQERSKKKEY----VPTLAELKLPQEELKRLRTXXXX 2889
            P+PG GN+IQ++HELR+  +KEK +ER K KEY     P+LAEL LP EEL+RLRT    
Sbjct: 128  PQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPAEELRRLRTVGIA 187

Query: 2888 XXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWR 2709
                       ITEGIVNGIHERWR+ ELVKI CEDICR+NM+RTH+LLE+KTGGLVIWR
Sbjct: 188  LRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVIWR 247

Query: 2708 SGSNIVLYRGADYKYPYFLSEECSRNVASEEVP------HNHGTTAXXXXXXXXXXXXXX 2547
            SGSNI+LYRGADYKYPYF       N A +  P        H T +              
Sbjct: 248  SGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMGTEEHMTNSSGTDVVKPDASD-- 305

Query: 2546 XNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLL 2367
              + S P +IQGVGSP+RVRF+LPGEA+  EEAD LL GLGPRFTDWWG EPLP+D DLL
Sbjct: 306  --RKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLL 363

Query: 2366 PAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLW 2187
            PA+VPG++RPFRLLPYGV PKLTNDEMT L+RLGRPLPCHF LGRNRKLQGLAAAI+KLW
Sbjct: 364  PAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLW 423

Query: 2186 EKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIE 2007
            EKCEIAK+A+KRGVQNTNSELMAEELK LTGG LLSRDREFIV YRGKDFLP+AVSSAIE
Sbjct: 424  EKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIE 483

Query: 2006 ERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTEA 1827
            ERRK ++  + K    N       E +Q T+G V +    R++ +  +  E+++L S EA
Sbjct: 484  ERRK-QVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHARRNNQKGV-QEKKKLTSMEA 541

Query: 1826 AVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPF 1647
            A+ RT+                    E +E+ QQ D+DKEGITE+E++MLRKIGL MKPF
Sbjct: 542  AIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPF 601

Query: 1646 LLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVS 1467
            LLLGRRGVF GTVENMHLHWKYRELVK+ITG +++EEVH +AR LEAESGGILVAVE V+
Sbjct: 602  LLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELVN 661

Query: 1466 KGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQ 1287
            KG+AIIVYRGKNY RPASLRPQ+LL+KR+AMKRSIEAQRR+SLK+HVLKL+QNI+ L+ +
Sbjct: 662  KGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSR 721

Query: 1286 LGKHED 1269
            L K+E+
Sbjct: 722  LAKNEE 727



 Score =  193 bits (491), Expect = 4e-46
 Identities = 120/237 (50%), Positives = 150/237 (63%), Gaps = 1/237 (0%)
 Frame = -1

Query: 1119 DFPSPDFQTDITVYESAHLPKLDTEEKIIMNGESRVTSFSSDSSKTCRQTSLSAT-SDAK 943
            D   P+ Q+  ++ ES  +  ++ ++K      S V+   S SS+   +   S T S  K
Sbjct: 813  DTIQPEHQSISSIKESKSMFNVNVDQKTF---GSAVSESVSKSSRGEVKIHFSETRSFNK 869

Query: 942  PRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLF 763
            PR  D K   S   S K    L        G  ++ V+L N+ERLLLRKQALKMKK+P+ 
Sbjct: 870  PREVDDKKEVSQLPSVKPQQALRSTRSRSEGMPTRKVQLSNRERLLLRKQALKMKKQPVL 929

Query: 762  AIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSK 583
            A+G+SN + GVA+ IK HF++YPLAIVNVKGRAKGTSV+EVV KLE+ TGAVLVSQEPSK
Sbjct: 930  AVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSK 989

Query: 582  IILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQSDLD 412
            +ILYRGWG   E  ++ G    NS  S   E K    ISPELISAIRLECGLQS+ D
Sbjct: 990  VILYRGWGPGGERGASNGNDTRNSRNS--REQKELMSISPELISAIRLECGLQSNHD 1044


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score =  851 bits (2199), Expect = 0.0
 Identities = 455/727 (62%), Positives = 539/727 (74%), Gaps = 14/727 (1%)
 Frame = -2

Query: 3407 TKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAIQRIAEK 3228
            +KTL  P    + F   P+ S K     PR  L     A SPD  T  LP+SAI+RIA+K
Sbjct: 14   SKTLLKPSPSHSLFSSTPSLSPK--PFFPRDSL--PVFAASPD--TEALPESAIRRIADK 67

Query: 3227 LRSLGYVEDEKDKDS---STTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPV 3057
            LRSLG+VE  K++++   + ++N   +SPG+IFVPLPTQLPKYRVGHT D+SWSTPENPV
Sbjct: 68   LRSLGFVEQPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPENPV 127

Query: 3056 PEPGSGNAIQRYHELRNVVIKEKIQERSKKKEY----VPTLAELKLPQEELKRLRTXXXX 2889
            P+PG G +IQ++HELR+  +KEK +ER K KEY     P+LAEL LP EEL+RLRT    
Sbjct: 128  PQPGLGKSIQKFHELRDEFLKEKDKERLKNKEYKKERAPSLAELTLPAEELRRLRTVGIA 187

Query: 2888 XXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWR 2709
                       ITEGIVNGIHERWR+ ELVKI CEDICR+NM+RTH+LLE+KTGGLVIWR
Sbjct: 188  LRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDICRLNMKRTHELLEKKTGGLVIWR 247

Query: 2708 SGSNIVLYRGADYKYPYFLSEECSRNVASEEVP------HNHGTTAXXXXXXXXXXXXXX 2547
            SGSNI+LYRGADYKYPYF       N A +  P        H T +              
Sbjct: 248  SGSNIILYRGADYKYPYFSENSFENNSAQDANPDLFMGAEEHMTNSSGIDAVKSDASD-- 305

Query: 2546 XNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLL 2367
              + S P +IQGVGSP+RVRF+LPGEA+  EEAD LL GLGPRFTDWWG EPLP+D DLL
Sbjct: 306  --RKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLL 363

Query: 2366 PAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLW 2187
            PA+VPG++RPFRLLPYGV PKLTNDEMT L+RLGRPLPCHF LGRNRKLQGLAAAI+KLW
Sbjct: 364  PAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLW 423

Query: 2186 EKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIE 2007
            EKCEIAK+A+KRGVQNTNSELM EELK LTGG LLSRDREFIV YRGKDFLP+AVSSAIE
Sbjct: 424  EKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIE 483

Query: 2006 ERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVC-EYEKNRKDQKFELSSEERELKSTE 1830
            ERRK ++  + K    N       E +Q T+  V  +   +R +QK     E+++L S E
Sbjct: 484  ERRK-QVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHAHRNNQKG--VQEKKKLTSME 540

Query: 1829 AAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKP 1650
            AA+ RT+                    E +E+ QQ D+DKEGITE+E++MLRKIGL MKP
Sbjct: 541  AAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKP 600

Query: 1649 FLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERV 1470
            FLLLGRRGVF GTVENMHLHWKYRELVK+ITG +++EEVH +AR LEAESGGILVAVERV
Sbjct: 601  FLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGILVAVERV 660

Query: 1469 SKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKL 1290
            +KGYAIIVYRGKNY RPASLRPQ+LL+KR+AMKRSIEAQRR+SLK+HVLKL+QNI+ L+ 
Sbjct: 661  NKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQS 720

Query: 1289 QLGKHED 1269
            +L K+E+
Sbjct: 721  RLAKNEE 727



 Score =  190 bits (482), Expect = 4e-45
 Identities = 118/237 (49%), Positives = 149/237 (62%), Gaps = 1/237 (0%)
 Frame = -1

Query: 1119 DFPSPDFQTDITVYESAHLPKLDTEEKIIMNGESRVTSFSSDSSKTCRQTSLSAT-SDAK 943
            D   P  Q+  ++ ES  +  ++ +++      S V+   S SS+   +   S T S  K
Sbjct: 813  DTIQPQHQSISSIKESKSMFNVNVDQETF---GSAVSESVSKSSRGEVKIHFSETRSFNK 869

Query: 942  PRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLF 763
            PR  + K   S     K    L        G S++ V+L N+ERLLLRKQALKMKK+P+ 
Sbjct: 870  PREVNNKMEVSQPPPVKPQQTLRSTRSRSEGMSTRRVQLSNRERLLLRKQALKMKKQPVL 929

Query: 762  AIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSK 583
            A+G+SN + GVA+ IK HF++YPLAIVNVKGRAKGTSV+EVV KLE+ TGAVLVSQEPSK
Sbjct: 930  AVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSK 989

Query: 582  IILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQSDLD 412
            +ILYRGWG   E  ++ G    NS  S   E K    ISPELISAIRLECGLQS+ D
Sbjct: 990  VILYRGWGPGGERGASNGNDTSNSKNS--REQKELMSISPELISAIRLECGLQSNND 1044


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  846 bits (2185), Expect = 0.0
 Identities = 451/724 (62%), Positives = 530/724 (73%), Gaps = 11/724 (1%)
 Frame = -2

Query: 3422 FRSPYTKTLFNPFSV-PATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAI 3246
            F SP      +P S+ P+TF     + SKF        + R   A +PDA  +TLP++AI
Sbjct: 36   FPSPTPTFTSSPPSISPSTFKTLNPKPSKF--------ILR---ASNPDA--QTLPKTAI 82

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPE 3066
            QRIAEKLRSLGYV+ ++ +   +++     S GEIFVPLP QLPK+RVGHT D SWS PE
Sbjct: 83   QRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGHTIDQSWSLPE 142

Query: 3065 NPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLRTXXXXX 2886
            NPVPEPG+G  I R+HELR  V +EK   R K+ E  PTLAEL LP+EEL+RL+      
Sbjct: 143  NPVPEPGTGGVITRFHELRKEVKREKKLVR-KEDERAPTLAELTLPEEELRRLKGIGIQI 201

Query: 2885 XXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRS 2706
                      ITEGIVNGIHERWR+ E+VKI CEDIC++NM+RTHD+LERKTGGLVIWRS
Sbjct: 202  RKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRS 261

Query: 2705 GSNIVLYRGADYKYPYFLSEECSRNVASEEVP---------HNHGTTAXXXXXXXXXXXX 2553
            GS I+LYRGA+YKYPYFLS+    N +S +           H+                 
Sbjct: 262  GSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGP 321

Query: 2552 XXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGD 2373
               NK++   LIQGVG P RVRFQLPGEAQL EEAD LL GLGPRFTDWWGY+PLP+D D
Sbjct: 322  MPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDAD 381

Query: 2372 LLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIK 2193
            LLPAVVPG+RRPFRLLPYG+ PKLTNDEMT+L+RLGRPLPCHFALGRNRKLQGLAA++IK
Sbjct: 382  LLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIK 441

Query: 2192 LWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSA 2013
            LWEKCEIAKIA+KRGVQNTNSE+MAEELK LTGG LLSRDREFIV YRGKDFLP AVSSA
Sbjct: 442  LWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSA 501

Query: 2012 IEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYE-KNRKDQKFELSSEERELKS 1836
            IE RRKY +   ++  D +   +   E E  TS    + +     DQK    S+ R L+S
Sbjct: 502  IEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRS 561

Query: 1835 TEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTM 1656
             EA V RT+                    E  +I QQP++DKEGITE+E+YMLRK+GL M
Sbjct: 562  AEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRM 621

Query: 1655 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVE 1476
            KPFLLLGRRG+F GTVENMHLHWKYRELVKII+ GRS+E++H VARTLEAESGGILVAVE
Sbjct: 622  KPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVE 681

Query: 1475 RVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDL 1296
            RVSKGYAII+YRGKNY RPASLRPQ+LLNKR+A+KRS+EAQRRESLK+HVL+L++NID+L
Sbjct: 682  RVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDEL 741

Query: 1295 KLQL 1284
            K QL
Sbjct: 742  KHQL 745



 Score =  169 bits (429), Expect = 6e-39
 Identities = 110/238 (46%), Positives = 145/238 (60%), Gaps = 7/238 (2%)
 Frame = -1

Query: 1164 DSASPKLNDASQSSLDFPSP-DFQTDITVYESAH---LPKLDTEEKIIMNGESRVTSFSS 997
            DS     ND     +DFPS  D  TD    E +    L +++T     MN E   T+ S 
Sbjct: 790  DSLQTSHND---KRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGECTTCSE 846

Query: 996  DSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTE---NGYSSKAVRL 826
            D      +TS  A       +N  +TMESS  S K++ +  V    +   N    +A  L
Sbjct: 847  DLVSQ-GETSCYAI------VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPL 899

Query: 825  PNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQ 646
             N+ERLLLRKQAL+MKKRP+ A+G+SN + GVA+ IK HF+++PLAIVNVKGRAKGTSVQ
Sbjct: 900  SNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQ 959

Query: 645  EVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRHV 472
            EV+ KLE+ TGAVLVSQEPSK+ILYRGWG++EE   +   ++IN    +  E+ T+ V
Sbjct: 960  EVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRINIVFKSAEENSTQMV 1017


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  846 bits (2185), Expect = 0.0
 Identities = 451/724 (62%), Positives = 530/724 (73%), Gaps = 11/724 (1%)
 Frame = -2

Query: 3422 FRSPYTKTLFNPFSV-PATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAI 3246
            F SP      +P S+ P+TF     + SKF        + R   A +PDA  +TLP++AI
Sbjct: 36   FPSPTPTFTSSPPSISPSTFKTLNPKPSKF--------ILR---ASNPDA--QTLPKTAI 82

Query: 3245 QRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPE 3066
            QRIAEKLRSLGYV+ ++ +   +++     S GEIFVPLP QLPK+RVGHT D SWS PE
Sbjct: 83   QRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGHTIDQSWSLPE 142

Query: 3065 NPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLRTXXXXX 2886
            NPVPEPG+G  I R+HELR  V +EK   R K+ E  PTLAEL LP+EEL+RL+      
Sbjct: 143  NPVPEPGTGGVITRFHELRKEVKREKKLVR-KEDERAPTLAELTLPEEELRRLKGIGIQI 201

Query: 2885 XXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRS 2706
                      ITEGIVNGIHERWR+ E+VKI CEDIC++NM+RTHD+LERKTGGLVIWRS
Sbjct: 202  RKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRS 261

Query: 2705 GSNIVLYRGADYKYPYFLSEECSRNVASEEVP---------HNHGTTAXXXXXXXXXXXX 2553
            GS I+LYRGA+YKYPYFLS+    N +S +           H+                 
Sbjct: 262  GSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGP 321

Query: 2552 XXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGD 2373
               NK++   LIQGVG P RVRFQLPGEAQL EEAD LL GLGPRFTDWWGY+PLP+D D
Sbjct: 322  MPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDAD 381

Query: 2372 LLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIK 2193
            LLPAVVPG+RRPFRLLPYG+ PKLTNDEMT+L+RLGRPLPCHFALGRNRKLQGLAA++IK
Sbjct: 382  LLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIK 441

Query: 2192 LWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSA 2013
            LWEKCEIAKIA+KRGVQNTNSE+MAEELK LTGG LLSRDREFIV YRGKDFLP AVSSA
Sbjct: 442  LWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSA 501

Query: 2012 IEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYE-KNRKDQKFELSSEERELKS 1836
            IE RRKY +   ++  D +   +   E E  TS    + +     DQK    S+ R L+S
Sbjct: 502  IEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRS 561

Query: 1835 TEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTM 1656
             EA V RT+                    E  +I QQP++DKEGITE+E+YMLRK+GL M
Sbjct: 562  AEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRM 621

Query: 1655 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVE 1476
            KPFLLLGRRG+F GTVENMHLHWKYRELVKII+ GRS+E++H VARTLEAESGGILVAVE
Sbjct: 622  KPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVE 681

Query: 1475 RVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDL 1296
            RVSKGYAII+YRGKNY RPASLRPQ+LLNKR+A+KRS+EAQRRESLK+HVL+L++NID+L
Sbjct: 682  RVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDEL 741

Query: 1295 KLQL 1284
            K QL
Sbjct: 742  KHQL 745



 Score =  194 bits (493), Expect = 2e-46
 Identities = 126/261 (48%), Positives = 161/261 (61%), Gaps = 8/261 (3%)
 Frame = -1

Query: 1164 DSASPKLNDASQSSLDFPSP-DFQTDITVYESAH---LPKLDTEEKIIMNGESRVTSFSS 997
            DS     ND     +DFPS  D  TD    E +    L +++T     MN E   T+ S 
Sbjct: 790  DSLQTSHND---KRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGECTTCSE 846

Query: 996  DSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTE---NGYSSKAVRL 826
            D      +TS  A       +N  +TMESS  S K++ +  V    +   N    +A  L
Sbjct: 847  DLVSQ-GETSCYAI------VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPL 899

Query: 825  PNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQ 646
             N+ERLLLRKQAL+MKKRP+ A+G+SN + GVA+ IK HF+++PLAIVNVKGRAKGTSVQ
Sbjct: 900  SNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQ 959

Query: 645  EVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEE-PKSTKGKSKINSSPSAGMESKTRHVI 469
            EV+ KLE+ TGAVLVSQEPSK+ILYRGWG++EE  +S +         SAG E   R  +
Sbjct: 960  EVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTV 1019

Query: 468  SPELISAIRLECGLQSDLD*G 406
            SPEL +AIRLECGL+S+ D G
Sbjct: 1020 SPELRAAIRLECGLKSNQDKG 1040


>gb|EMJ18282.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  824 bits (2129), Expect = 0.0
 Identities = 440/739 (59%), Positives = 533/739 (72%), Gaps = 9/739 (1%)
 Frame = -2

Query: 3416 SPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTL-PQSAIQR 3240
            SP+   +    S+ + FF FP ++   Q+ +P     R ++       T+TL P+SAIQR
Sbjct: 11   SPFPPKILTDQSL-SPFFSFP-KTLPSQNPKPSKFAIRSSTT-----GTKTLAPKSAIQR 63

Query: 3239 IAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENP 3060
            IAEKLRSLG+ E+ +           T   GEIFVPLP +LPKYRVGHT DSSWSTPENP
Sbjct: 64   IAEKLRSLGFTENNEKPQPQPD----TKYAGEIFVPLPQRLPKYRVGHTLDSSWSTPENP 119

Query: 3059 VPEPGSGNAIQRYHELRNVVIKEK-IQERSKKKEYVPTLAELKLPQEELKRLRTXXXXXX 2883
            VPEPG+G AI R+HELR  V K+K +++  KK+E VPTLAEL L + EL+RL T      
Sbjct: 120  VPEPGTGRAIARFHELRREVKKQKELEKTGKKEERVPTLAELSLGKGELRRLTTVGIGLR 179

Query: 2882 XXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRSG 2703
                     ITEGIVNGIHE WR++E+VKI CED+CRMNM+RTHD+LERKTGGLV+WRSG
Sbjct: 180  KKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKTGGLVVWRSG 239

Query: 2702 SNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGTTAXXXXXXXXXXXXXXXNKV---- 2535
            S IVLYRG +YKYPYFL ++   + ++ +  HN    A                 +    
Sbjct: 240  SKIVLYRGVNYKYPYFLRDKVDED-STIDTSHNALPDAHINDGINEISNEVNSAIIPSTT 298

Query: 2534 ---SHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLLP 2364
               + P L++GVG  +RVRFQLPGEAQL EEAD +L GLGPRFTDWWGYEPLPVD DLLP
Sbjct: 299  NERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADHMLEGLGPRFTDWWGYEPLPVDADLLP 358

Query: 2363 AVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLWE 2184
            A+VPG+R+PFRLLPYG+ PKLT+DEMT ++RLGRPLPCHFALGRNR LQGLA++I+KLWE
Sbjct: 359  AIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWE 418

Query: 2183 KCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIEE 2004
            KCEIAKIA+KRGVQNTN+E+MAEELK LTGG LL+RDREFIVLYRGKDFLP AVSSAIEE
Sbjct: 419  KCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPPAVSSAIEE 478

Query: 2003 RRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTEAA 1824
            RRKY +  +++  +         E E +T  +     +   D K  L S +R+LKS E  
Sbjct: 479  RRKYAIHAEKQIAEHGTSVTTRQELEPRTEPE--NKHEWTNDHKMGLPSAKRKLKSAEVV 536

Query: 1823 VGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPFL 1644
            V RTS                    EN  I QQP++DKEGIT++E+YMLRK+GL MKPFL
Sbjct: 537  VNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKVGLRMKPFL 596

Query: 1643 LLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVSK 1464
            L+GRRGVF GT+ENMHLHWKYRELVKII   +S+E V  VA+TLEAESGGILVAVERVSK
Sbjct: 597  LMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSK 656

Query: 1463 GYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQL 1284
            GYAIIVYRGKNY+RPASLRPQ+LLNKR+AMKRSIEAQRRESLK+HVL+L++NID+LKL L
Sbjct: 657  GYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLL 716

Query: 1283 GKHEDGGNMDLAKASEHQL 1227
             K ++  N+     S ++L
Sbjct: 717  VKDKEADNLQSVGESRNEL 735



 Score =  171 bits (433), Expect = 2e-39
 Identities = 106/258 (41%), Positives = 148/258 (57%), Gaps = 5/258 (1%)
 Frame = -1

Query: 1179 GSHETDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLPKLDTEEKIIMNGESRVTSFS 1000
            G  E      KLND   + ++      Q  +  + S      + E + I + E       
Sbjct: 858  GKQEAHVTPMKLNDGMGTIVNGQLATQQDKVITFSSICCEDENGEVEPISSSEPVTNETH 917

Query: 999  SDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSS---KAVR 829
            ++  +        + S + P   D    +SS     S+S  SV  +    ++    K+V 
Sbjct: 918  ANLFRDVNGEEGVSISTSFPE--DAMAKDSSGRFGNSESEPSVPVMVRKDFNERPLKSVH 975

Query: 828  LPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSV 649
            L N ERLLLRKQALKMKKRP+ A+G++N + GVA+ IK HF ++PLAIVNVKGRAKGTSV
Sbjct: 976  LSNGERLLLRKQALKMKKRPVLAVGRNNIVSGVAKTIKAHFEKHPLAIVNVKGRAKGTSV 1035

Query: 648  QEVVLKLEEVTGAVLVSQEPSKIILYRGWGS--QEEPKSTKGKSKINSSPSAGMESKTRH 475
            +EVVLKLE+ TG VLVSQEPSK+ILYRGWG+    + K++  + K++          T+ 
Sbjct: 1036 REVVLKLEQATGGVLVSQEPSKVILYRGWGAAGDNDRKASNTRKKVS----------TQG 1085

Query: 474  VISPELISAIRLECGLQS 421
             +SPEL++AIRLECG +S
Sbjct: 1086 AVSPELLAAIRLECGFKS 1103


>gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 966

 Score =  817 bits (2110), Expect = 0.0
 Identities = 449/758 (59%), Positives = 527/758 (69%), Gaps = 15/758 (1%)
 Frame = -2

Query: 3461 QMLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSP 3282
            Q+  SP   +L + RSP      +PFS       F  RSS                    
Sbjct: 7    QLPTSPLPPKLLTHRSPPLFFFSSPFSTTPKPLKFTVRSS-------------------- 46

Query: 3281 DADTRTL-PQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYR 3105
            +AD +TL P+SAIQRI+EKLRSLG+ ++    +         SS GEIFVPLP +LPK R
Sbjct: 47   NADAQTLLPKSAIQRISEKLRSLGFTDENPSPEPER------SSAGEIFVPLPHRLPKQR 100

Query: 3104 VGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSK-------KKEYVPTL 2946
            VGHT D+SWS+PENPVPEPGSG AI+R+ EL+  V +++ +ER +       ++E VPTL
Sbjct: 101  VGHTIDASWSSPENPVPEPGSGTAIKRFRELKTEVRRQRREERKESAANAREERERVPTL 160

Query: 2945 AELKLPQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMN 2766
            AEL+LP EEL+RLRT               ITEGIVNGIHERWRQ+E+VKI CEDICRMN
Sbjct: 161  AELRLPPEELRRLRTLGIGLRKKVKVGKAGITEGIVNGIHERWRQSEVVKIECEDICRMN 220

Query: 2765 MRRTHDLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVP-----HNH 2601
            M+RTHDLLE+KTGGLV+WRSGS IVLYRG  YKYPYF   + + + A+  VP       +
Sbjct: 221  MKRTHDLLEKKTGGLVVWRSGSKIVLYRGIKYKYPYFFVGKDASHTATLPVPDVGDEEQN 280

Query: 2600 GTTAXXXXXXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGP 2421
             T                 NK+  P LIQGVG PNRVRFQLPGEAQLAEEAD LL GLGP
Sbjct: 281  KTDTSSSIDGVETVAPTPGNKLVQPSLIQGVGLPNRVRFQLPGEAQLAEEADRLLDGLGP 340

Query: 2420 RFTDWWGYEPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFA 2241
            RFTDWWGY+P PVD DLL  +V G+RRPFRLLPYGV PKLT+DEMT L+RL RPLPCHFA
Sbjct: 341  RFTDWWGYDPQPVDADLLRPIVHGYRRPFRLLPYGVLPKLTDDEMTTLRRLARPLPCHFA 400

Query: 2240 LGRNRKLQGLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFI 2061
            LGRNR LQGLA++++KLWEKCE+AKIAIKRGVQNTNSE+MAEELK LTGG LL+RDREFI
Sbjct: 401  LGRNRNLQGLASSVVKLWEKCEVAKIAIKRGVQNTNSEMMAEELKSLTGGTLLARDREFI 460

Query: 2060 VLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRK 1881
            VLYRGKDFLP+AVSSAIEERRKY +  K+  T+           + Q    VC   + R+
Sbjct: 461  VLYRGKDFLPSAVSSAIEERRKYVIQAKKLKTEHQ---TSVKTEQDQLGSVVCGASELRE 517

Query: 1880 --DQKFELSSEERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKE 1707
                K  L SE+R+    E +V  TS                    E  E  QQP++DKE
Sbjct: 518  INGHKKRLPSEQRKPSVAETSVKGTSIKLSMALEKKAKAEQLLAELEKAESRQQPEIDKE 577

Query: 1706 GITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHV 1527
            GIT++E+YMLRKIGL MKPFLLLGRRGVF GT+ENMHLHWKYRELVK+I+  +S+E VH 
Sbjct: 578  GITKEERYMLRKIGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKVISNEKSIEAVHQ 637

Query: 1526 VARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRR 1347
            VA+TLEAESGGILVAVER SKGYAIIVYRGKNY RPASLRPQ+LL KR AMKRSIEAQRR
Sbjct: 638  VAQTLEAESGGILVAVERESKGYAIIVYRGKNYERPASLRPQTLLTKRAAMKRSIEAQRR 697

Query: 1346 ESLKVHVLKLSQNIDDLKLQLGKHEDGGNMDLAKASEH 1233
            +SLK+HVLKL++NIDDLKLQL K +    M  A  S +
Sbjct: 698  QSLKLHVLKLTKNIDDLKLQLVKDKQRNKMQPADESSN 735



 Score =  183 bits (465), Expect = 4e-43
 Identities = 111/234 (47%), Positives = 147/234 (62%), Gaps = 10/234 (4%)
 Frame = -1

Query: 1092 DITVYESAHLPKLDTEEKIIMNGESRVTSFSSDSSKTCRQ-TSLSATSDAKPRLNDIKTM 916
            ++   +SA    LD E K      S   SF + S +      + SA   A+  ++D + +
Sbjct: 740  EVNGIQSAESLSLDAEVK------SGSLSFPTTSHEEMSNGMNSSAAVGAQHDVSDEEEV 793

Query: 915  ESSTDSPKSDSRLSVHTVTENGYS---SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSN 745
            ESS  S K+    SV  + + G +   S+ + L N+ERLLLRKQALKMKKRP+ A+G++N
Sbjct: 794  ESSAKSDKNGLEPSVPVIADKGLNEMPSRTIILSNRERLLLRKQALKMKKRPVLAVGRNN 853

Query: 744  QIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRG 565
             + GVA+AI  HF++YPLAIVNVKGRAKGTSVQEVV  LE+ TGAVLVSQEPSK+ILYRG
Sbjct: 854  IVSGVAKAINAHFQKYPLAIVNVKGRAKGTSVQEVVFMLEQATGAVLVSQEPSKVILYRG 913

Query: 564  WGSQE------EPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQS 421
            WG+ E      +  +T  + K+ S P A         +SPEL+ AIR ECGLQ+
Sbjct: 914  WGAGESSDHSVKKNTTDARRKLESQPPA---------VSPELLDAIRTECGLQN 958


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score =  810 bits (2093), Expect = 0.0
 Identities = 444/734 (60%), Positives = 515/734 (70%), Gaps = 9/734 (1%)
 Frame = -2

Query: 3458 MLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV--S 3285
            MLL   + Q       +   +F PF VP T             L  R  + R NS +  S
Sbjct: 1    MLLPLFHQQPLILAKTFPDRIFPPFLVPNT-------------LVSRRNVSRANSGIFCS 47

Query: 3284 PDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSS--TTNNKGTSSPGEIFVPLPTQLPK 3111
              +  +TLPQSAIQRIAEKLRSLG+VE++ D  +   T    G +SPGEIFVPLP QLP 
Sbjct: 48   SASGRKTLPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPI 107

Query: 3110 YRVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKL 2931
            +RVGHT D+SWSTP  PVP+PGSG AI RYHEL+ V  KE   ER KK+E VP+LAEL L
Sbjct: 108  HRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMER-KKEEKVPSLAELTL 166

Query: 2930 PQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTH 2751
            P  EL+RLRT               ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTH
Sbjct: 167  PPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTH 226

Query: 2750 DLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSE-ECSRNVASEEVPHNHGTT-AXXXX 2577
            D+LE KTGGLVIWRSGS I+LYRG +Y+YPYF+S+ + +   AS     + G   +    
Sbjct: 227  DVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSREKQ 286

Query: 2576 XXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGY 2397
                       NK+  P L QGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y
Sbjct: 287  SIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAY 346

Query: 2396 EPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQ 2217
            +PLPVDGDLLPAVVP +RRPFRLLPYGV+PKLT+DEMT ++RLGRPLPCHFALGRNR LQ
Sbjct: 347  DPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQ 406

Query: 2216 GLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDF 2037
            GLA AI+KLWEKCE+AKIA+KRGVQNTNSELMAEELK LTGG L+SRD++FIVLYRGKDF
Sbjct: 407  GLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDF 466

Query: 2036 LPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSS 1857
            LP+AVSSAIEERR+  +  +      N   + ENE E +      + E   KDQK  + +
Sbjct: 467  LPSAVSSAIEERRRQTMIMENSSVHGN--KLTENEEEIKPRAVKEDIELEAKDQKDHIQT 524

Query: 1856 EE---RELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEK 1686
             +   R+  S EA + +TS                    EN E  Q  D+DKEGIT DEK
Sbjct: 525  HQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEK 584

Query: 1685 YMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEA 1506
            YMLRKIGL MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII    S+E  H VA  LEA
Sbjct: 585  YMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEA 644

Query: 1505 ESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHV 1326
            ESGGILVAVE VSKGYAIIVYRGKNY RP  LRPQ+LL+KR+A+KRS+EAQRR+SLK+HV
Sbjct: 645  ESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHV 704

Query: 1325 LKLSQNIDDLKLQL 1284
            LKLS NI++L  QL
Sbjct: 705  LKLSNNIEELNRQL 718



 Score =  166 bits (419), Expect = 9e-38
 Identities = 92/162 (56%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
 Frame = -1

Query: 900  SPKSDSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEA 721
            S  S S++S     ++        L N+ERL+LRKQALKMKKRP FA+G+SN + G+A  
Sbjct: 851  STGSGSQISALRERKSENDGLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLART 910

Query: 720  IKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPK 541
            +K HF++ PLAIVNVKGRA GTSVQEV+ KL+E TGA+LVSQEPSK+ILYRGWG++EE K
Sbjct: 911  LKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMK 970

Query: 540  S----TKGKSKINSSPSAGMESKTRHVISPELISAIRLECGL 427
            S       KS IN   +        HV SP LI AIRLECGL
Sbjct: 971  SFYPNNNVKSSINLPSTRSFVDDPPHV-SPALIEAIRLECGL 1011


>ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297928 [Fragaria vesca
            subsp. vesca]
          Length = 1169

 Score =  805 bits (2080), Expect = 0.0
 Identities = 433/731 (59%), Positives = 515/731 (70%), Gaps = 12/731 (1%)
 Frame = -2

Query: 3413 PYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLP-QSAIQRI 3237
            P T T  + FS    FF FP         +P     R ++A     D++TL   SAIQRI
Sbjct: 14   PKTLTDLHSFS---PFFSFPKPP------KPSQFTIRSSAA-----DSKTLAANSAIQRI 59

Query: 3236 AEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPV 3057
            AEKLRSLG+ ED    DS      G SS GEIFVPLP  LPKYRVGHT D SWSTPE PV
Sbjct: 60   AEKLRSLGFTEDNNKPDSKP----GPSSAGEIFVPLPETLPKYRVGHTIDPSWSTPEKPV 115

Query: 3056 PEPGSGNAIQRYHELRNVVIK-------EKIQERSKKKEYVPTLAELKLPQEELKRLRTX 2898
            P PG+G AI R+HE+R  + +       E+ +E  KK+E VPTLAE+ L   EL+RLRT 
Sbjct: 116  PAPGTGRAISRFHEMRRELKRLEEVEEMERKKEGKKKEEKVPTLAEMSLSTAELRRLRTV 175

Query: 2897 XXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLV 2718
                          ITEGIVNGIHE WR++E+VK+ CED+CR+NM+RTHDLLERKTGGLV
Sbjct: 176  GIELKKKVRVGKAGITEGIVNGIHENWRRSEVVKLVCEDLCRLNMKRTHDLLERKTGGLV 235

Query: 2717 IWRSGSNIVLYRGADYKYPYFLS----EECSRNVASEEVPHNHGTTAXXXXXXXXXXXXX 2550
            +WRSG+ I+LYRG +YKYPYFL     E+ + + + + V +  GT               
Sbjct: 236  VWRSGAKIILYRGVNYKYPYFLKGKKREDSTSDDSGDAVVNAGGTDEANSVTGPSPTD-- 293

Query: 2549 XXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDL 2370
               + + P LIQGVG  NR RFQLPGEA+LAEEAD +L GLGPRF DWWGYEPLPVDGDL
Sbjct: 294  ---EKTQPALIQGVGLANRFRFQLPGEAELAEEADRMLEGLGPRFNDWWGYEPLPVDGDL 350

Query: 2369 LPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKL 2190
            LPAVVPG+R+PFRLLPYG+ PKLT+DEMT ++RL RPLP HFALGRNRKLQGLA +I+KL
Sbjct: 351  LPAVVPGYRKPFRLLPYGLQPKLTDDEMTTIRRLARPLPTHFALGRNRKLQGLATSIVKL 410

Query: 2189 WEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAI 2010
            WEKCEIAK+A+KRGVQNTN ELMAEELK LTGG L++RD+EFIVLYRGKDFLP AVSSAI
Sbjct: 411  WEKCEIAKVAVKRGVQNTNCELMAEELKRLTGGTLIARDKEFIVLYRGKDFLPPAVSSAI 470

Query: 2009 EERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTE 1830
            EERRK  +    +     +      +HE +T        + + D    L SE+R+LKSTE
Sbjct: 471  EERRKAVMYADNRSRKLRISATTAQDHESRTE------LETKDDLTGGLPSEKRKLKSTE 524

Query: 1829 AAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKP 1650
            AA  R S                    E  E  QQP++DKEGITE+E+YMLRK+GL MKP
Sbjct: 525  AAASRASIKLSMALEKREKAEKLLAELEKAESPQQPEIDKEGITEEERYMLRKVGLKMKP 584

Query: 1649 FLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERV 1470
            FLL+GRRGVF GT+ENMHLHWKYRELVKII   +S+E  H VA+TLE+ESGGILVAVERV
Sbjct: 585  FLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIESAHQVAQTLESESGGILVAVERV 644

Query: 1469 SKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKL 1290
            SKGYAIIVYRGKNY RPA+LRPQ+LL KR+A+KRSIEAQRRESLK+HVLKL++NID+L+ 
Sbjct: 645  SKGYAIIVYRGKNYIRPANLRPQTLLTKREALKRSIEAQRRESLKLHVLKLNKNIDELEE 704

Query: 1289 QLGKHEDGGNM 1257
             + K +D  NM
Sbjct: 705  LVVKGKDSNNM 715



 Score =  185 bits (470), Expect = 1e-43
 Identities = 105/186 (56%), Positives = 132/186 (70%), Gaps = 3/186 (1%)
 Frame = -1

Query: 969  SLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTV---TENGYSSKAVRLPNKERLLLR 799
            S SA  D + R+ D + +ESS  S  + S+  V T+   T N   S+AV L N ERLLLR
Sbjct: 986  SSSAILDNQHRVFDYE-LESSGRSGNTKSKSPVPTMVRKTLNEMPSRAVHLSNSERLLLR 1044

Query: 798  KQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEV 619
            KQALKMKKRP+ A+G++N + GVA+AIK HF RYPLAIVNVKGRAKGTSV+E+V KLE+ 
Sbjct: 1045 KQALKMKKRPVLAVGRNNIVTGVAKAIKAHFERYPLAIVNVKGRAKGTSVREIVFKLEQA 1104

Query: 618  TGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRL 439
            TGAVLVSQEPSK+ILYRGWG+ + P +   K+ I    +          +SPEL++AIRL
Sbjct: 1105 TGAVLVSQEPSKVILYRGWGAGDSPGNNDKKNTIGKKVAP---------VSPELLAAIRL 1155

Query: 438  ECGLQS 421
            ECGLQ+
Sbjct: 1156 ECGLQN 1161


>gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
          Length = 1020

 Score =  804 bits (2076), Expect = 0.0
 Identities = 444/743 (59%), Positives = 516/743 (69%), Gaps = 18/743 (2%)
 Frame = -2

Query: 3458 MLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV--S 3285
            MLL   + Q       +   +F PF VP T             L  R  + R NS +  S
Sbjct: 1    MLLPLFHQQPLILAKTFPDRIFPPFLVPNT-------------LVSRRNVSRANSGIFCS 47

Query: 3284 PDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSS--TTNNKGTSSPGEIFVPLPTQLPK 3111
              +  +TLPQSAIQRIAEKLRSLG+VE++ D  +   T    G +SPGEIFVPLP QLP 
Sbjct: 48   SASGRKTLPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPI 107

Query: 3110 YRVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKL 2931
            +RVGHT D+SWSTP  PVP+PGSG AI RYHEL+ V  KE   ER KK+E VP+LAEL L
Sbjct: 108  HRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMER-KKEEKVPSLAELTL 166

Query: 2930 PQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTH 2751
            P  EL+RLRT               ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTH
Sbjct: 167  PPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTH 226

Query: 2750 DLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSE-ECSRNVASEEVPHNHGTT-AXXXX 2577
            D+LE KTGGLVIWRSGS I+LYRG +Y+YPYF+S+ + +   AS     + G   +    
Sbjct: 227  DVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSREKQ 286

Query: 2576 XXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGY 2397
                       NK+  P L QGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y
Sbjct: 287  SIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAY 346

Query: 2396 EPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQ 2217
            +PLPVDGDLLPAVVP +RRPFRLLPYGV+PKLT+DEMT ++RLGRPLPCHFALGRNR LQ
Sbjct: 347  DPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQ 406

Query: 2216 GLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKL---------LTGGILLSRDREF 2064
            GLA AI+KLWEKCE+AKIA+KRGVQNTNSELMAEELK+         LTGG L+SRD++F
Sbjct: 407  GLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKVVGLLLVIKWLTGGTLISRDKDF 466

Query: 2063 IVLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNR 1884
            IVLYRGKDFLP+AVSSAIEERR+  +  +      N   + ENE E +      + E   
Sbjct: 467  IVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGN--KLTENEEEIKPRAVKEDIELEA 524

Query: 1883 KDQKFELSSEE---RELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVD 1713
            KDQK  + + +   R+  S EA + +TS                    EN E  Q  D+D
Sbjct: 525  KDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDID 584

Query: 1712 KEGITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEV 1533
            KEGIT DEKYMLRKIGL MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII    S+E  
Sbjct: 585  KEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAA 644

Query: 1532 HVVARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQ 1353
            H VA  LEAESGGILVAVE VSKGYAIIVYRGKNY RP  LRPQ+LL+KR+A+KRS+EAQ
Sbjct: 645  HKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQ 704

Query: 1352 RRESLKVHVLKLSQNIDDLKLQL 1284
            RR+SLK+HVLKLS NI++L  QL
Sbjct: 705  RRKSLKLHVLKLSNNIEELNRQL 727



 Score =  166 bits (419), Expect = 9e-38
 Identities = 92/162 (56%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
 Frame = -1

Query: 900  SPKSDSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEA 721
            S  S S++S     ++        L N+ERL+LRKQALKMKKRP FA+G+SN + G+A  
Sbjct: 860  STGSGSQISALRERKSENDGLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLART 919

Query: 720  IKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPK 541
            +K HF++ PLAIVNVKGRA GTSVQEV+ KL+E TGA+LVSQEPSK+ILYRGWG++EE K
Sbjct: 920  LKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMK 979

Query: 540  S----TKGKSKINSSPSAGMESKTRHVISPELISAIRLECGL 427
            S       KS IN   +        HV SP LI AIRLECGL
Sbjct: 980  SFYPNNNVKSSINLPSTRSFVDDPPHV-SPALIEAIRLECGL 1020