BLASTX nr result
ID: Catharanthus22_contig00003499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00003499
(279 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABX47016.1| chloroplast chlorophyll a/b binding protein cab-P... 115 8e-24
gb|ABW90990.1| LHCB4 [Bambusa oldhamii] 115 8e-24
ref|XP_006657829.1| PREDICTED: chlorophyll a-b binding protein C... 114 1e-23
ref|NP_001105502.1| photosystem II subunit29 [Zea mays] gi|23269... 112 4e-23
ref|XP_004958012.1| PREDICTED: chlorophyll a-b binding protein C... 112 4e-23
ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group] g... 112 4e-23
ref|XP_003562892.1| PREDICTED: chlorophyll a-b binding protein C... 112 4e-23
ref|XP_002882591.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata] g... 112 4e-23
ref|XP_002463016.1| hypothetical protein SORBIDRAFT_02g036260 [S... 112 4e-23
ref|NP_001136606.1| uncharacterized protein LOC100216729 [Zea ma... 112 4e-23
gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japo... 112 4e-23
gb|ESW05901.1| hypothetical protein PHAVU_010G002100g [Phaseolus... 112 7e-23
gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [V... 112 7e-23
ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C... 112 7e-23
ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C... 112 7e-23
emb|CAA06961.1| chlorophyll a/b-binding protein [Hordeum vulgare... 110 2e-22
ref|XP_006366348.1| PREDICTED: chlorophyll a-b binding protein C... 110 2e-22
ref|XP_006407730.1| hypothetical protein EUTSA_v10021263mg [Eutr... 110 2e-22
ref|XP_006848193.1| hypothetical protein AMTR_s00029p00239610 [A... 110 2e-22
gb|EPS68718.1| hypothetical protein M569_06048, partial [Genlise... 110 2e-22
>gb|ABX47016.1| chloroplast chlorophyll a/b binding protein cab-PhE7 [Phyllostachys
edulis]
Length = 287
Score = 115 bits (287), Expect = 8e-24
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 227 DPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 283
>gb|ABW90990.1| LHCB4 [Bambusa oldhamii]
Length = 287
Score = 115 bits (287), Expect = 8e-24
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 227 DPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 283
>ref|XP_006657829.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Oryza brachyantha]
Length = 288
Score = 114 bits (285), Expect = 1e-23
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 229 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 285
>ref|NP_001105502.1| photosystem II subunit29 [Zea mays] gi|2326947|emb|CAA90681.1|
Chlorophyll a/b-binding protein CP29 precursor [Zea
mays] gi|195639374|gb|ACG39155.1| hypothetical protein
[Zea mays] gi|414887094|tpg|DAA63108.1| TPA: chlorophyll
a/b-binding protein CP29 Precursor isoform 1 [Zea mays]
gi|414887095|tpg|DAA63109.1| TPA: chlorophyll
a/b-binding protein CP29 Precursor isoform 2 [Zea mays]
Length = 291
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 231 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 287
>ref|XP_004958012.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Setaria italica]
Length = 290
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 230 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 286
>ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|3075488|gb|AAC14566.1| chlorophyll a/b-binding
protein [Oryza sativa Japonica Group]
gi|34394009|dbj|BAC84033.1| chlorophyll a/b-binding
protein [Oryza sativa Japonica Group]
gi|113611511|dbj|BAF21889.1| Os07g0558400 [Oryza sativa
Japonica Group] gi|125558786|gb|EAZ04322.1| hypothetical
protein OsI_26463 [Oryza sativa Indica Group]
gi|215704418|dbj|BAG93852.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737393|dbj|BAG96322.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737709|dbj|BAG96839.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764955|dbj|BAG86652.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767447|dbj|BAG99675.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 290
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 230 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 286
>ref|XP_003562892.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Brachypodium distachyon]
Length = 288
Score = 112 bits (281), Expect = 4e-23
Identities = 54/56 (96%), Positives = 54/56 (96%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT 112
DPE KERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DT
Sbjct: 230 DPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDT 285
>ref|XP_002882591.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata]
gi|297328431|gb|EFH58850.1| LHCB4.2 [Arabidopsis lyrata
subsp. lyrata]
Length = 287
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K +LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 228 DPEKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 284
>ref|XP_002463016.1| hypothetical protein SORBIDRAFT_02g036260 [Sorghum bicolor]
gi|241926393|gb|EER99537.1| hypothetical protein
SORBIDRAFT_02g036260 [Sorghum bicolor]
Length = 288
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 228 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 284
>ref|NP_001136606.1| uncharacterized protein LOC100216729 [Zea mays]
gi|194696340|gb|ACF82254.1| unknown [Zea mays]
Length = 291
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 231 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 287
>gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japonica Group]
Length = 267
Score = 112 bits (281), Expect = 4e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KERLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 207 DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 263
>gb|ESW05901.1| hypothetical protein PHAVU_010G002100g [Phaseolus vulgaris]
Length = 289
Score = 112 bits (279), Expect = 7e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 230 DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286
>gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 112 bits (279), Expect = 7e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 230 DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286
>ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Glycine max]
Length = 290
Score = 112 bits (279), Expect = 7e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 230 DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286
>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 112 bits (279), Expect = 7e-23
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 230 DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286
>emb|CAA06961.1| chlorophyll a/b-binding protein [Hordeum vulgare subsp. vulgare]
Length = 75
Score = 110 bits (275), Expect = 2e-22
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KE LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 16 DPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 72
>ref|XP_006366348.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Solanum tuberosum]
Length = 285
Score = 110 bits (275), Expect = 2e-22
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 225 DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 281
>ref|XP_006407730.1| hypothetical protein EUTSA_v10021263mg [Eutrema salsugineum]
gi|557108876|gb|ESQ49183.1| hypothetical protein
EUTSA_v10021263mg [Eutrema salsugineum]
Length = 287
Score = 110 bits (275), Expect = 2e-22
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K +LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 228 DPEKKAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 284
>ref|XP_006848193.1| hypothetical protein AMTR_s00029p00239610 [Amborella trichopoda]
gi|548851498|gb|ERN09774.1| hypothetical protein
AMTR_s00029p00239610 [Amborella trichopoda]
Length = 291
Score = 110 bits (275), Expect = 2e-22
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE K LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 232 DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 288
>gb|EPS68718.1| hypothetical protein M569_06048, partial [Genlisea aurea]
Length = 283
Score = 110 bits (275), Expect = 2e-22
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -1
Query: 279 DPEAKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 109
DPE KE LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 223 DPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 279