BLASTX nr result

ID: Catharanthus22_contig00003485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00003485
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citr...    59   5e-07
ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citrus clementina]
           gi|568881878|ref|XP_006493776.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Citrus sinensis]
           gi|557524134|gb|ESR35501.1| hypothetical protein
           CICLE_v10004323mg [Citrus clementina]
          Length = 827

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
 Frame = -3

Query: 251 LLIIPYDMHFISAPS-LSKTLVSTSLFQ*GKRQSWYSPNDEFYITLFLDILNESRDNVSH 75
           L  +P  +H   A   ++ +  S SLF+  KRQSWY P DE Y+ LF D+LNESRD    
Sbjct: 158 LQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLF-DVLNESRDFDGM 216

Query: 74  SLMIRFLI---GENSLSYFSPYNRVIQ 3
             +   ++    +N +S FS YNRVIQ
Sbjct: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQ 243


>ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Solanum lycopersicum]
          Length = 794

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
 Frame = -3

Query: 251 LLIIPYDMHFISAPSLSKTL-VSTSLFQ*GKRQSWYSPNDEFYITLFLDILNESRDNVSH 75
           L  IP   H + A  + +    S SLF+  KRQ WY PND  YITLF D LN+SRD    
Sbjct: 123 LQFIPNMTHIMQALKVMEDSDASLSLFRWAKRQPWYKPNDACYITLF-DKLNQSRDFDGI 181

Query: 74  SLMIRFLI---GEN-SLSYFSPYNRVIQ 3
            L+   ++   GEN + S F+ YNRVIQ
Sbjct: 182 QLVFDDMVLDSGENGASSLFNAYNRVIQ 209


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