BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00003440
         (4844 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    72   3e-09
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A...    71   4e-09
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    70   7e-09
ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302...    70   1e-08
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    68   4e-08
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    68   5e-08
gb|EMS65807.1| Endo-1,4-beta-xylanase Z [Triticum urartu]              67   6e-08
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   8e-08
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi...    67   1e-07
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   1e-07
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    66   2e-07
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    66   2e-07
gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo...    66   2e-07
emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]         66   2e-07
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A...    65   4e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   5e-07
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    64   9e-07
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi...    64   9e-07
gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indi...    64   9e-07
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...    63   1e-06

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 71.6 bits (174), Expect = 3e-09
 Identities = 40/94 (42%), Positives = 52/94 (55%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS LIRKA  EQ+I G         +S+LF+ADDSLL    T  D + +K+I   YE 
Sbjct: 937  EGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEA 996

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMP 4826
            AS Q IN  KS+I F  +    + +    +L MP
Sbjct: 997  ASGQKINKDKSAICFSPKSPAAIKEACSAILDMP 1030


>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 968

 Score = 71.2 bits (173), Expect = 4e-09
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
 Frame = +3

Query: 4500 PTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLC 4664
            PT  + +G  + P       EGL+ L++KA  E  I G K  V    IS+L FADDSLL 
Sbjct: 258  PTRGLRQGDPLSPYLFLMVSEGLTGLLQKADREGMIHGVKAAVDAPIISHLLFADDSLLF 317

Query: 4665 KHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMP 4826
                  +AI +K  L  YE A+ Q IN+QKS+I FG  ++++   +I ++L +P
Sbjct: 318  GRAEIHEAIHVKQCLLLYESAAGQKINFQKSAIAFGPGLDDQTKLEITQMLGLP 371


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score = 70.5 bits (171), Expect = 7e-09
 Identities = 37/100 (37%), Positives = 63/100 (63%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS LI+ ++  +++ G K    G  IS+L FA DSL+    T E+ + + ++L+ YE+
Sbjct: 104  EGLSALIQASIKAKQLHGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEK 163

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCTGEG 4844
            AS Q++N+QKS+ILFG  ++    + + ++L + K  G G
Sbjct: 164  ASGQAVNFQKSAILFGKGLDFRTSEQLSQLLGIYKTEGFG 203


>ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302635 [Fragaria vesca
            subsp. vesca]
          Length = 913

 Score = 69.7 bits (169), Expect = 1e-08
 Identities = 39/94 (41%), Positives = 57/94 (60%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGL+ L++KA  E  I G K  V    IS++ FADDSLL       +AI +K  L  YE 
Sbjct: 208  EGLTGLLQKADQEGMIHGVKAAVDAPIISHMLFADDSLLFGRAEIHEAIHVKQCLLLYES 267

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMP 4826
            A+ Q IN+QKS+I FG  ++++   +I ++L +P
Sbjct: 268  AAGQKINFQKSAIAFGPGLDDQTKLEITQMLGVP 301


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 68.2 bits (165), Expect = 4e-08
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            +  S ++++ V+ + I GAK    G EIS+L FADDSLL    T ++ + +  IL  YE 
Sbjct: 656  DAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEA 715

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q INY+KS + F   +  E  ++++ +L M
Sbjct: 716  ASGQKINYEKSEVSFSRGVSCEKKEELITLLHM 748


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 67.8 bits (164), Expect = 5e-08
 Identities = 39/93 (41%), Positives = 51/93 (54%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS++++K      IQG + G  G  IS+L FADDS+            +K  LQ Y +
Sbjct: 279  EGLSSILQKKESMGVIQGIRNGHLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 338

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q IN QKSSI FG    EE+   + E LQ+
Sbjct: 339  ASGQKINLQKSSIFFGQNCPEEIKNSVKETLQV 371


>gb|EMS65807.1| Endo-1,4-beta-xylanase Z [Triticum urartu]
          Length = 679

 Score = 67.4 bits (163), Expect = 6e-08
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            +G S L+R+A  + +I+G   G  G  +++L FADDS++   G+ +  + +K IL+ YE 
Sbjct: 572  KGFSALLRQAQEDNKIKGVHFGSTGPHVTHLLFADDSIVFLEGSQDSLLALKEILRKYEA 631

Query: 4725 ASCQSINYQKSSILFG 4772
            AS Q +N QKSSI FG
Sbjct: 632  ASGQKVNLQKSSIFFG 647


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 67.0 bits (162), Expect = 8e-08
 Identities = 33/93 (35%), Positives = 54/93 (58%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            +  S +I++ V ++++ GAK   +G EIS+LFFADDSLL      ++  ++  IL  YE 
Sbjct: 653  DAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYEL 712

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q INY+KS + +   +      ++  +L M
Sbjct: 713  ASGQKINYEKSEVSYSRGVSVSQKDELTNILNM 745


>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
          Length = 1860

 Score = 66.6 bits (161), Expect = 1e-07
 Identities = 38/93 (40%), Positives = 51/93 (54%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS++++K      IQG + G  G  IS+L FADDS+            +K  LQ Y +
Sbjct: 1423 EGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 1482

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q IN QKSSI FG    E++   + E LQ+
Sbjct: 1483 ASGQKINLQKSSIFFGQNCPEDIKNSVKETLQV 1515


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 66.2 bits (160), Expect = 1e-07
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            +  S +I+K V E+++ GAK   +G  IS+LFFAD SLL    + ++  ++  IL  YE+
Sbjct: 653  DAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQ 712

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q INY KS + F   +     +++  +LQM
Sbjct: 713  ASGQKINYDKSEVSFSKGVSIAQKEELSNILQM 745


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 65.9 bits (159), Expect = 2e-07
 Identities = 40/100 (40%), Positives = 57/100 (57%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS+LIR+A     I GAK       IS+L FADD  L     +  A  MK+IL+ YE 
Sbjct: 1073 EGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYES 1132

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCTGEG 4844
            +S QSIN+QKS + +   +++ V   I ++L + +  G G
Sbjct: 1133 SSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTG 1172


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 65.9 bits (159), Expect = 2e-07
 Identities = 38/97 (39%), Positives = 56/97 (57%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EG S L+RK   E R+QG K       +S+L FADDSL+       DA  +++IL  YEE
Sbjct: 336  EGFSALLRKTEEEGRLQGIKVCHNATSVSHLLFADDSLIPCRANRGDAQNLQNILTLYEE 395

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCT 4835
             S Q +N +K +I+F +    E  +++M+ LQ+ K T
Sbjct: 396  FSGQMLNKEKFAIMFSSNTGSEKRREVMQTLQINKQT 432


>gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group]
          Length = 490

 Score = 65.9 bits (159), Expect = 2e-07
 Identities = 38/93 (40%), Positives = 51/93 (54%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS++++K      IQG + G  G  IS+L FADDS+            +K  LQ Y +
Sbjct: 136  EGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 195

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q IN QKSSI FG    E++   + E LQ+
Sbjct: 196  ASGQKINLQKSSIFFGQNCLEDIKNSVKETLQV 228


>emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]
          Length = 427

 Score = 65.9 bits (159), Expect = 2e-07
 Identities = 38/93 (40%), Positives = 51/93 (54%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS++++K      IQG + G  G  IS+L FADDS+            +K  LQ Y +
Sbjct: 73   EGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 132

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 4823
            AS Q IN QKSSI FG    E++   + E LQ+
Sbjct: 133  ASGQKINLQKSSIFFGQNCLEDIKNSVKETLQV 165


>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 888

 Score = 64.7 bits (156), Expect = 4e-07
 Identities = 36/97 (37%), Positives = 54/97 (55%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS+LI K V +  I+G K       + +LFFADDS +      ++    +++L  YE 
Sbjct: 217  EGLSSLISKVVADYTIKGLKLSPQAPILHHLFFADDSFIFGAAEADECQRFRTLLNMYES 276

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCT 4835
            AS Q INYQKSS++F   +  E   ++  +LQ+   T
Sbjct: 277  ASGQKINYQKSSVVFRRNVSPENQSELAAILQVQLST 313


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 64.3 bits (155), Expect = 5e-07
 Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
 Frame = +3

Query: 4494 FQPTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSL 4658
            F P+  + +G  + P       EGLSTL+R A  ++ I G K G     IS+LFFADDSL
Sbjct: 636  FFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSL 695

Query: 4659 LCKHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCTG 4838
            L    T E+   +  IL  YE AS Q +N +KS + +   +E + I  +   L      G
Sbjct: 696  LFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEG 755


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
            gi|241926916|gb|EES00061.1| hypothetical protein
            SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 63.5 bits (153), Expect = 9e-07
 Identities = 32/75 (42%), Positives = 50/75 (66%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            EGLS +++KA  + +I+G K      ++++LFFADDSL+       DA+ ++ IL  YE+
Sbjct: 230  EGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSLILMRARASDALELRRILDVYEK 289

Query: 4725 ASCQSINYQKSSILF 4769
            AS Q IN +KSS++F
Sbjct: 290  ASGQVINKEKSSMMF 304


>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
          Length = 666

 Score = 63.5 bits (153), Expect = 9e-07
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
 Frame = +3

Query: 4494 FQPTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSL 4658
            F P+  + +G  + P       +GLS L+++AV    I   K       +S+L FADD+L
Sbjct: 21   FAPSRGLRQGDPLSPFLFLFVADGLSALLKEAVQNGEITPVKVCRRAPGVSHLLFADDTL 80

Query: 4659 LCKHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQ 4820
            L     ++ A ++K++L+ Y  ++ Q IN QK SILFG    EE+ +++  VLQ
Sbjct: 81   LFFKANSDQANMVKNVLESYAASTGQLINPQKCSILFGHACPEELQEEVKNVLQ 134


>gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indica Group]
          Length = 724

 Score = 63.5 bits (153), Expect = 9e-07
 Identities = 37/97 (38%), Positives = 56/97 (57%)
 Frame = +3

Query: 4545 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 4724
            +G S L+RK   E R+QG K       +S+L FADDSL+       DA  +++IL  YEE
Sbjct: 166  QGFSALLRKTEEEGRLQGIKVCHNATSVSHLLFADDSLIPCRANRGDAQNLQNILTLYEE 225

Query: 4725 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCT 4835
             S Q I+ +K +I+F +    E  +++M+ LQ+ K T
Sbjct: 226  FSGQMIDKEKFAIMFSSNTGSEKRREVMQTLQINKQT 262


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score = 63.2 bits (152), Expect = 1e-06
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = +3

Query: 4500 PTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLC 4664
            PT  + +G  + P       EG +TL+ KA  + ++QG         +S+LFFADDS + 
Sbjct: 1047 PTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVF 1106

Query: 4665 KHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPK 4829
               T  +  V+K I + YE AS Q IN QKS + F A +  +    +  VL +P+
Sbjct: 1107 AKATDNNCGVLKHIFEVYEHASGQQINCQKSCVAFSANIHMDTQSRLASVLGVPR 1161