BLASTX nr result

ID: Catharanthus22_contig00003370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00003370
         (773 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB23437.1| Serine/arginine-rich splicing factor 7 [Morus not...    64   7e-08
ref|XP_006345687.1| PREDICTED: serine/arginine-rich splicing fac...    59   2e-06
ref|XP_006345686.1| PREDICTED: serine/arginine-rich splicing fac...    59   2e-06
ref|XP_006345685.1| PREDICTED: serine/arginine-rich splicing fac...    59   2e-06
ref|XP_004246726.1| PREDICTED: uncharacterized protein LOC101266...    59   2e-06
ref|XP_004246725.1| PREDICTED: uncharacterized protein LOC101266...    59   2e-06
emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]    57   7e-06
ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258...    57   9e-06

>gb|EXB23437.1| Serine/arginine-rich splicing factor 7 [Morus notabilis]
          Length = 301

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 44/105 (41%), Positives = 61/105 (58%)
 Frame = +3

Query: 231 KSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEKVGLADR 410
           + R RS TPD+G+ +  E  SPSP   +N  +  ++ DS SPR++S+SP S E+    DR
Sbjct: 206 RKRSRSATPDDGSPK--ERGSPSP---RNGRLSDRNDDSGSPREKSRSP-SPERDSPDDR 259

Query: 411 KYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDEPRTQRGSES 545
           +Y   SP E NG+           E R+PVD+D D  R+ RGSES
Sbjct: 260 RYR--SPNETNGRSQSPSPSPR--EDRSPVDDDDDNRRSPRGSES 300


>ref|XP_006345687.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X3 [Solanum tuberosum]
          Length = 273

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = +3

Query: 228 PKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEKVGLAD 407
           PK+R+RS TP+EG+    E++SP PSP     V+++   SQSPR+RS SP S  +     
Sbjct: 173 PKTRKRSPTPEEGSPM--EAKSP-PSP-----VREEGAYSQSPRERSVSPSSPRRDSPTP 224

Query: 408 RKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDE------PRTQRGSESP 548
           RKY+ DSP E NG              R   DED ++       R+ R S+SP
Sbjct: 225 RKYDDDSPAEANGGSRSPSPKYR----RNHADEDDEDEGEFCNQRSGRESQSP 273


>ref|XP_006345686.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Solanum tuberosum]
          Length = 314

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = +3

Query: 228 PKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEKVGLAD 407
           PK+R+RS TP+EG+    E++SP PSP     V+++   SQSPR+RS SP S  +     
Sbjct: 214 PKTRKRSPTPEEGSPM--EAKSP-PSP-----VREEGAYSQSPRERSVSPSSPRRDSPTP 265

Query: 408 RKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDE------PRTQRGSESP 548
           RKY+ DSP E NG              R   DED ++       R+ R S+SP
Sbjct: 266 RKYDDDSPAEANGGSRSPSPKYR----RNHADEDDEDEGEFCNQRSGRESQSP 314


>ref|XP_006345685.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X1 [Solanum tuberosum]
          Length = 315

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = +3

Query: 228 PKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEKVGLAD 407
           PK+R+RS TP+EG+    E++SP PSP     V+++   SQSPR+RS SP S  +     
Sbjct: 215 PKTRKRSPTPEEGSPM--EAKSP-PSP-----VREEGAYSQSPRERSVSPSSPRRDSPTP 266

Query: 408 RKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDE------PRTQRGSESP 548
           RKY+ DSP E NG              R   DED ++       R+ R S+SP
Sbjct: 267 RKYDDDSPAEANGGSRSPSPKYR----RNHADEDDEDEGEFCNQRSGRESQSP 315


>ref|XP_004246726.1| PREDICTED: uncharacterized protein LOC101266446 isoform 2 [Solanum
           lycopersicum]
          Length = 295

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
 Frame = +3

Query: 228 PKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEKVGLAD 407
           PK+R+RS TP+EG+    E++SPS SP     ++++   SQSPR+RS SP S  +   A 
Sbjct: 197 PKTRKRSPTPEEGSPM--EAKSPS-SP-----MREEGAYSQSPRERSVSPSSTRRDSPAP 248

Query: 408 RKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDEPRTQRG---SESP 548
           RKY+ DSP E NG            +     DED  E R QR    S+SP
Sbjct: 249 RKYDDDSPAEANG---GSRSPSPKYQRNHEDDEDEGEFRNQRSGRESQSP 295


>ref|XP_004246725.1| PREDICTED: uncharacterized protein LOC101266446 isoform 1 [Solanum
           lycopersicum]
          Length = 315

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
 Frame = +3

Query: 228 PKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEKVGLAD 407
           PK+R+RS TP+EG+    E++SPS SP     ++++   SQSPR+RS SP S  +   A 
Sbjct: 217 PKTRKRSPTPEEGSPM--EAKSPS-SP-----MREEGAYSQSPRERSVSPSSTRRDSPAP 268

Query: 408 RKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDEPRTQRG---SESP 548
           RKY+ DSP E NG            +     DED  E R QR    S+SP
Sbjct: 269 RKYDDDSPAEANG---GSRSPSPKYQRNHEDDEDEGEFRNQRSGRESQSP 315


>emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
          Length = 306

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = +3

Query: 213 KGTRDPKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEK 392
           + T   K R+RS TP++   R  E  SP      N   ++Q   SQSPR++S+SPVS E+
Sbjct: 208 RSTPTSKPRKRSPTPEDS--RPQERISP------NVYKREQPEYSQSPREKSRSPVSSER 259

Query: 393 VGLADRKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVDE-PRTQRGSESP 548
                R+Y   SP + NG+           + R+P+DED D+  R+ RGSESP
Sbjct: 260 DSPVARRYR--SPSDANGR----SRSQSPRDERSPLDEDEDBNSRSPRGSESP 306


>ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
          Length = 307

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +3

Query: 213 KGTRDPKSRRRSLTPDEGNVRGAESRSPSPSPDKNRMVKQQDGDSQSPRDRSQSPVSHEK 392
           + T   K R+RS TP++   R  E  SP      N   ++Q   SQSPR++S+SPVS E+
Sbjct: 209 RSTPTSKPRKRSPTPEDS--RPQERISP------NVYKREQPEYSQSPREKSRSPVSSER 260

Query: 393 VGLADRKYEADSPYEVNGQXXXXXXXXXXXEVRTPVDEDVD-EPRTQRGSESP 548
                R+Y   SP + NG+           + R+P+DED D   R+ RGSESP
Sbjct: 261 DSPVARRYR--SPSDANGR----SRSQSPRDERSPLDEDEDNNSRSPRGSESP 307


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