BLASTX nr result
ID: Catharanthus22_contig00003110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00003110
(1184 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 85 7e-14
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|5... 82 4e-13
ref|NP_564693.1| RING/U-box domain-containing protein [Arabidops... 82 4e-13
ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citr... 82 6e-13
ref|XP_002307159.2| hypothetical protein POPTR_0005s09270g [Popu... 82 6e-13
gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 80 1e-12
ref|XP_006407223.1| hypothetical protein EUTSA_v10021230mg [Eutr... 80 1e-12
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 1e-12
ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 1e-12
ref|XP_002310643.2| hypothetical protein POPTR_0007s07510g [Popu... 80 2e-12
gb|ABK96352.1| unknown [Populus trichocarpa x Populus deltoides] 80 2e-12
ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 2e-12
gb|ESW24544.1| hypothetical protein PHAVU_004G139600g [Phaseolus... 80 2e-12
ref|XP_004299466.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 2e-12
ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 2e-12
gb|ACU20614.1| unknown [Glycine max] 79 3e-12
ref|XP_006661882.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 79 4e-12
ref|XP_002317728.2| hypothetical protein POPTR_0012s03370g [Popu... 79 4e-12
ref|XP_004982780.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 78 6e-12
ref|XP_003557291.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 78 6e-12
>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus] gi|449439503|ref|XP_004137525.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Cucumis sativus]
gi|449439505|ref|XP_004137526.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
sativus]
Length = 378
Score = 84.7 bits (208), Expect = 7e-14
Identities = 32/62 (51%), Positives = 50/62 (80%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+K+TE L++ ++ QCA+C D FE++++ KL+PC H+YH++CI+ WL+LH SCP+CR
Sbjct: 209 DIKITEELLAT-DSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYE 267
Query: 144 LP 139
LP
Sbjct: 268 LP 269
>ref|XP_002329726.1| predicted protein [Populus trichocarpa]
gi|566206023|ref|XP_006374275.1| hypothetical protein
POPTR_0015s05600g [Populus trichocarpa]
gi|118486397|gb|ABK95038.1| unknown [Populus
trichocarpa] gi|550322032|gb|ERP52072.1| hypothetical
protein POPTR_0015s05600g [Populus trichocarpa]
Length = 345
Score = 82.0 bits (201), Expect = 4e-13
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+K+TE L+ ++ QCA+C D FE+ ++ K +PC H+YH +CI+ WL+LH SCP+CR
Sbjct: 185 DVKVTEELMQS-DSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCRYE 243
Query: 144 LP 139
LP
Sbjct: 244 LP 245
>ref|NP_564693.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983408|gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7
[Arabidopsis thaliana] gi|4204263|gb|AAD10644.1| Unknown
protein [Arabidopsis thaliana]
gi|14517546|gb|AAK62663.1| At1g55530/T5A14_7
[Arabidopsis thaliana] gi|23308203|gb|AAN18071.1|
At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|332195138|gb|AEE33259.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 351
Score = 82.0 bits (201), Expect = 4e-13
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -3
Query: 288 ENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNLPA 136
E QC++C+DDFEI KL+PCTH +HS+C+L WL+LH SCP+CR LPA
Sbjct: 219 ETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPA 269
>ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citrus clementina]
gi|568871578|ref|XP_006488959.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like [Citrus sinensis]
gi|557548167|gb|ESR58796.1| hypothetical protein
CICLE_v10015642mg [Citrus clementina]
Length = 375
Score = 81.6 bits (200), Expect = 6e-13
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = -3
Query: 288 ENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNLPA 136
E QC++C+DDFEI K +PC H +HS CIL WL+LH SCP+CRC LPA
Sbjct: 240 ETLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPA 290
>ref|XP_002307159.2| hypothetical protein POPTR_0005s09270g [Populus trichocarpa]
gi|550338459|gb|EEE94155.2| hypothetical protein
POPTR_0005s09270g [Populus trichocarpa]
Length = 290
Score = 81.6 bits (200), Expect = 6e-13
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -3
Query: 321 MKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNL 142
MK+TE ++ N+QCA+C D+FE + VK +PC H++H +CI+ WL +H SCP+CR L
Sbjct: 190 MKVTEEMMKSEMNNQCAVCKDEFESGEEVKGMPCKHVFHEDCIMPWLKMHNSCPVCRYEL 249
Query: 141 PA 136
PA
Sbjct: 250 PA 251
>gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 378
Score = 80.5 bits (197), Expect = 1e-12
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -3
Query: 321 MKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNL 142
+K+TE L++ ++ QCA+C D FE+ + K +PC H+YHS CIL WL+LH SCP+CR L
Sbjct: 205 VKITEELLAS-DSSQCAVCKDTFELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYEL 263
Query: 141 P 139
P
Sbjct: 264 P 264
>ref|XP_006407223.1| hypothetical protein EUTSA_v10021230mg [Eutrema salsugineum]
gi|557108369|gb|ESQ48676.1| hypothetical protein
EUTSA_v10021230mg [Eutrema salsugineum]
Length = 299
Score = 80.5 bits (197), Expect = 1e-12
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = -3
Query: 279 QCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNLPA 136
QC +C+DDFEI + K +PC H +HS+C+L WL+LH SCP+CRC LPA
Sbjct: 207 QCTVCLDDFEIGMVAKEMPCKHRFHSDCLLPWLELHSSCPVCRCLLPA 254
>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 369
Score = 80.5 bits (197), Expect = 1e-12
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+ +TE L++ ++ QCA+C D FE+ + K +PC H+YH++CIL WL+LH SCP+CR
Sbjct: 188 DVSVTEELLAS-DSSQCAVCKDTFELGETAKQIPCKHIYHADCILPWLELHNSCPVCRYE 246
Query: 144 LP 139
LP
Sbjct: 247 LP 248
>ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoformX2
[Glycine max] gi|571477964|ref|XP_006587425.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X3 [Glycine max]
gi|571477966|ref|XP_006587426.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X4 [Glycine
max]
Length = 376
Score = 80.5 bits (197), Expect = 1e-12
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+ +TE L++ ++ QCA+C D FE+ + K +PC H+YH++CIL WL+LH SCP+CR
Sbjct: 189 DVSVTEELLAS-DSSQCAVCKDTFELGETAKQIPCKHIYHADCILPWLELHNSCPVCRYE 247
Query: 144 LP 139
LP
Sbjct: 248 LP 249
>ref|XP_002310643.2| hypothetical protein POPTR_0007s07510g [Populus trichocarpa]
gi|550334341|gb|EEE91093.2| hypothetical protein
POPTR_0007s07510g [Populus trichocarpa]
Length = 297
Score = 80.1 bits (196), Expect = 2e-12
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = -3
Query: 321 MKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNL 142
MK+TE ++ N+QCA+C D+FE + VK +PC H++H +CI+ WL++H SCP+CR L
Sbjct: 189 MKVTEEMMKSEMNNQCAVCKDEFEGGEEVKGMPCKHVFHEDCIIPWLNMHNSCPVCRYEL 248
Query: 141 P 139
P
Sbjct: 249 P 249
>gb|ABK96352.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 296
Score = 80.1 bits (196), Expect = 2e-12
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = -3
Query: 321 MKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNL 142
MK+TE ++ N+QCA+C D+FE + VK +PC H++H +CI+ WL++H SCP+CR L
Sbjct: 189 MKVTEEMMKSEMNNQCAVCKDEFEGGEEVKGMPCKHVFHEDCIIPWLNMHNSCPVCRYEL 248
Query: 141 P 139
P
Sbjct: 249 P 249
>ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 387
Score = 79.7 bits (195), Expect = 2e-12
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+K+TE L+ ++ QCA+C D FE+ K +PC H+YH +CI+ WL+LH SCP+CR
Sbjct: 207 DIKITEELLDS-DSSQCAVCKDTFELGMEAKQIPCKHIYHKDCIMPWLELHNSCPVCRYE 265
Query: 144 LP 139
LP
Sbjct: 266 LP 267
>gb|ESW24544.1| hypothetical protein PHAVU_004G139600g [Phaseolus vulgaris]
Length = 359
Score = 79.7 bits (195), Expect = 2e-12
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+ +TE L++ ++ QCA+C D FE+ + K +PC H+YH++CIL WL++H SCP+CR
Sbjct: 186 DVSVTEELLAS-DSSQCAVCKDTFELGETAKQMPCKHIYHADCILPWLEMHNSCPVCRYE 244
Query: 144 LP 139
LP
Sbjct: 245 LP 246
>ref|XP_004299466.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca
subsp. vesca]
Length = 379
Score = 79.7 bits (195), Expect = 2e-12
Identities = 31/61 (50%), Positives = 46/61 (75%)
Frame = -3
Query: 321 MKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNL 142
+K+T+ L+ ++ QCA+C D FE+++ K +PC H+YHS+CIL WL+LH SCP+CR L
Sbjct: 206 VKITQELLDS-DSSQCAVCKDSFELDEEAKQMPCKHIYHSDCILPWLELHNSCPVCRHEL 264
Query: 141 P 139
P
Sbjct: 265 P 265
>ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Solanum lycopersicum] gi|460379301|ref|XP_004235402.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Solanum lycopersicum]
Length = 383
Score = 79.7 bits (195), Expect = 2e-12
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+K+TE L+ ++ QCA+C D FE+ K +PC H+YH +CI+ WL+LH SCP+CR
Sbjct: 207 DIKITEELLDS-DSSQCAVCKDTFELGMEAKQIPCKHIYHKDCIMPWLELHNSCPVCRYE 265
Query: 144 LP 139
LP
Sbjct: 266 LP 267
>gb|ACU20614.1| unknown [Glycine max]
Length = 188
Score = 79.3 bits (194), Expect = 3e-12
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = -3
Query: 288 ENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCNLP 139
EN QC++C+DDFE+ K +PC H +HS CIL WL+LH SCP+CR LP
Sbjct: 77 ENSQCSVCLDDFEVGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRLQLP 126
>ref|XP_006661882.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Oryza
brachyantha]
Length = 363
Score = 79.0 bits (193), Expect = 4e-12
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+ +T+ +V+ + +CA+C +DF + K +PC H+YHSNCI+ WL+LH SCPICR
Sbjct: 209 DVIVTDAMVAATDGAECAVCKEDFSPGEGAKQMPCKHIYHSNCIMPWLELHNSCPICRFE 268
Query: 144 LP 139
LP
Sbjct: 269 LP 270
>ref|XP_002317728.2| hypothetical protein POPTR_0012s03370g [Populus trichocarpa]
gi|550326298|gb|EEE95948.2| hypothetical protein
POPTR_0012s03370g [Populus trichocarpa]
Length = 269
Score = 79.0 bits (193), Expect = 4e-12
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+K+T+ L+ E ++ QCA+C D FE+ + K +PC H+YH +CI WL+LH SCP+CR
Sbjct: 186 DIKVTKELL-ESDSSQCAVCKDSFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCRYE 244
Query: 144 LP 139
LP
Sbjct: 245 LP 246
>ref|XP_004982780.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 393
Score = 78.2 bits (191), Expect = 6e-12
Identities = 29/62 (46%), Positives = 45/62 (72%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+ +T+ +V+ E +CA+C +DF ++ K +PC H+YH++CI+ WL+LH SCPICR
Sbjct: 237 DVVVTDAMVAAAEGAECAVCKEDFSPGEVAKQMPCKHIYHNDCIVPWLELHNSCPICRFE 296
Query: 144 LP 139
LP
Sbjct: 297 LP 298
>ref|XP_003557291.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 338
Score = 78.2 bits (191), Expect = 6e-12
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = -3
Query: 324 DMKMTERLVSEWENHQCAICIDDFEINQMVKLLPCTHLYHSNCILRWLDLHKSCPICRCN 145
D+ ++ +++ QCA+C+DDFE+ K LPC H++H +CIL WLDLH SCP+CR
Sbjct: 188 DVAVSATMMAADGGAQCAVCMDDFELGASAKQLPCKHVFHKDCILPWLDLHSSCPVCRHE 247
Query: 144 LP 139
LP
Sbjct: 248 LP 249