BLASTX nr result
ID: Catharanthus22_contig00003079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00003079
(337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25319.3| unnamed protein product [Vitis vinifera] 132 4e-29
ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251... 126 3e-27
ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing fac... 125 8e-27
gb|EXB88502.1| Serine/arginine-rich splicing factor 4 [Morus not... 123 3e-26
ref|XP_006485979.1| PREDICTED: serine/arginine-rich splicing fac... 123 3e-26
ref|XP_006436157.1| hypothetical protein CICLE_v10032170mg [Citr... 123 3e-26
ref|XP_006436154.1| hypothetical protein CICLE_v10032170mg [Citr... 123 3e-26
gb|EXB23437.1| Serine/arginine-rich splicing factor 7 [Morus not... 122 5e-26
gb|EMJ06842.1| hypothetical protein PRUPE_ppa009294mg [Prunus pe... 122 6e-26
ref|XP_006345907.1| PREDICTED: serine/arginine-rich splicing fac... 121 8e-26
ref|XP_004239756.1| PREDICTED: serine/arginine-rich splicing fac... 121 8e-26
ref|NP_190918.3| serine/arginine-rich splicing factor RS2Z32 [Ar... 121 1e-25
ref|XP_006293063.1| hypothetical protein CARUB_v10019350mg [Caps... 121 1e-25
ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arab... 121 1e-25
gb|EMJ19928.1| hypothetical protein PRUPE_ppa009074mg [Prunus pe... 120 1e-25
gb|AFK35693.1| unknown [Lotus japonicus] 120 2e-25
ref|XP_004960312.1| PREDICTED: serine/arginine-rich splicing fac... 119 5e-25
gb|EOY18433.1| RNA-binding family protein with retrovirus zinc f... 119 5e-25
gb|EOY18432.1| RNA-binding family protein with retrovirus zinc f... 119 5e-25
gb|EOY18430.1| RNA-binding family protein with retrovirus zinc f... 119 5e-25
>emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 132 bits (333), Expect = 4e-29
Identities = 64/74 (86%), Positives = 68/74 (91%)
Frame = +2
Query: 116 LRFASPLSSEKMPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFV 295
L F P S+KMPRYDDRHG+TRLYVGRL+SRTRSRDLEDLFSRYGRVRDVDMK D+AFV
Sbjct: 22 LGFYLPPLSDKMPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFV 81
Query: 296 EFSDPRDADDARYS 337
EFSDPRDADDARYS
Sbjct: 82 EFSDPRDADDARYS 95
>ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 126 bits (316), Expect = 3e-27
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDRHG+TRLYVGRL+SRTRSRDLEDLFSRYGRVRDVDMK D+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus] gi|449451691|ref|XP_004143595.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z32-like isoform 2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus] gi|449507562|ref|XP_004163067.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z32-like isoform 2 [Cucumis sativus]
Length = 309
Score = 125 bits (313), Expect = 8e-27
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRL+SRTRSRDL+DLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>gb|EXB88502.1| Serine/arginine-rich splicing factor 4 [Morus notabilis]
Length = 313
Score = 123 bits (308), Expect = 3e-26
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVG L+SRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RYS 337
RY+
Sbjct: 61 RYA 63
>ref|XP_006485979.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Citrus sinensis]
Length = 340
Score = 123 bits (308), Expect = 3e-26
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRLASRTRSRDLE++FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>ref|XP_006436157.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865230|ref|XP_006485980.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X2 [Citrus sinensis] gi|557538353|gb|ESR49397.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 312
Score = 123 bits (308), Expect = 3e-26
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRLASRTRSRDLE++FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>ref|XP_006436154.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865232|ref|XP_006485981.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X3 [Citrus sinensis] gi|557538350|gb|ESR49394.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 311
Score = 123 bits (308), Expect = 3e-26
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRLASRTRSRDLE++FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>gb|EXB23437.1| Serine/arginine-rich splicing factor 7 [Morus notabilis]
Length = 301
Score = 122 bits (306), Expect = 5e-26
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRL+SRTRSRDLE LFSRYGRVRDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRSRDLERLFSRYGRVRDVDMKRDFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>gb|EMJ06842.1| hypothetical protein PRUPE_ppa009294mg [Prunus persica]
Length = 298
Score = 122 bits (305), Expect = 6e-26
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRLASRTRSRDLE LFSRYGRVRDVDMKR++AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLASRTRSRDLERLFSRYGRVRDVDMKREFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>ref|XP_006345907.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Solanum tuberosum] gi|565358185|ref|XP_006345908.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z33-like isoform X2 [Solanum tuberosum]
Length = 300
Score = 121 bits (304), Expect = 8e-26
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVG L+SRTRSRDLED+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLEDVFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RY 334
RY
Sbjct: 61 RY 62
>ref|XP_004239756.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Solanum lycopersicum]
Length = 306
Score = 121 bits (304), Expect = 8e-26
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVG L+SRTRSRDLED+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLEDVFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RY 334
RY
Sbjct: 61 RY 62
>ref|NP_190918.3| serine/arginine-rich splicing factor RS2Z32 [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName:
Full=Serine/arginine-rich splicing factor RS2Z32;
AltName: Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein
[Arabidopsis thaliana] gi|222422875|dbj|BAH19424.1|
AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| serine/arginine-rich
splicing factor RS2Z32 [Arabidopsis thaliana]
Length = 284
Score = 121 bits (303), Expect = 1e-25
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRL+SRTR+RDLE LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RY 334
RY
Sbjct: 61 RY 62
>ref|XP_006293063.1| hypothetical protein CARUB_v10019350mg [Capsella rubella]
gi|482561770|gb|EOA25961.1| hypothetical protein
CARUB_v10019350mg [Capsella rubella]
Length = 283
Score = 121 bits (303), Expect = 1e-25
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRL+SRTR+RDLE LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RY 334
RY
Sbjct: 61 RY 62
>ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata] gi|297323760|gb|EFH54181.1| hypothetical protein
ARALYDRAFT_323893 [Arabidopsis lyrata subsp. lyrata]
Length = 284
Score = 121 bits (303), Expect = 1e-25
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G TRLYVGRL+SRTR+RDLE LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRARDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RY 334
RY
Sbjct: 61 RY 62
>gb|EMJ19928.1| hypothetical protein PRUPE_ppa009074mg [Prunus persica]
Length = 307
Score = 120 bits (302), Expect = 1e-25
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPR+DDRHG +RLYVGRL+SRTRSR+LED+FSRYGRVRDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRHDDRHGGSRLYVGRLSSRTRSRELEDVFSRYGRVRDVDMKRDFAFVEFSDPRDADDA 60
Query: 329 RYS 337
RYS
Sbjct: 61 RYS 63
>gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 120 bits (301), Expect = 2e-25
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDD++G TRLYVGRL+SRTRSRDLE +FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RYS 337
RY+
Sbjct: 61 RYN 63
>ref|XP_004960312.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Setaria italica] gi|514743127|ref|XP_004960313.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z33-like isoform X2 [Setaria italica]
Length = 334
Score = 119 bits (297), Expect = 5e-25
Identities = 54/63 (85%), Positives = 62/63 (98%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR+G+TRLYVGRLASRTRSRDLE LFSRYGR+R+V++KRDYAF+EFSDPRDADDA
Sbjct: 1 MPRYDDRYGSTRLYVGRLASRTRSRDLEYLFSRYGRIREVELKRDYAFIEFSDPRDADDA 60
Query: 329 RYS 337
RY+
Sbjct: 61 RYN 63
>gb|EOY18433.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 4 [Theobroma cacao]
Length = 299
Score = 119 bits (297), Expect = 5e-25
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR TRLYVG L+SRTRSRDLED+FSRYGR+RDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRRSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RYS 337
RY+
Sbjct: 61 RYA 63
>gb|EOY18432.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 3 [Theobroma cacao]
Length = 302
Score = 119 bits (297), Expect = 5e-25
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR TRLYVG L+SRTRSRDLED+FSRYGR+RDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRRSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RYS 337
RY+
Sbjct: 61 RYA 63
>gb|EOY18430.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 1 [Theobroma cacao]
Length = 304
Score = 119 bits (297), Expect = 5e-25
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +2
Query: 149 MPRYDDRHGTTRLYVGRLASRTRSRDLEDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 328
MPRYDDR TRLYVG L+SRTRSRDLED+FSRYGR+RDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRRSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADDA 60
Query: 329 RYS 337
RY+
Sbjct: 61 RYA 63