BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00002829
         (1345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-li...   567   e-159
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li...   566   e-159
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   563   e-158
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   553   e-155
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...   551   e-154
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li...   551   e-154
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   550   e-154
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li...   549   e-154
ref|XP_002302226.1| replication factor C 36 kDA family protein [...   548   e-153
gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus...   546   e-153
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li...   546   e-153
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li...   546   e-153
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li...   546   e-153
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ...   541   e-151
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   540   e-151
ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-li...   538   e-150
ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutr...   532   e-148
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A...   531   e-148
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar...   526   e-147
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              524   e-146

>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-like [Solanum tuberosum]
          Length = 357

 Score =  567 bits (1462), Expect = e-159
 Identities = 286/344 (83%), Positives = 319/344 (92%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNASRNFKGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIVETI 1093
            MAE IS M++D+D   ++   GKN+V  + T+ ++ PWVEK RPQSLSDVAAHRDIVETI
Sbjct: 1    MAETISLMDIDDDKIDTKPNNGKNIV--SNTEPRSVPWVEKFRPQSLSDVAAHRDIVETI 58

Query: 1092 DRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQI 913
            DRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQI
Sbjct: 59   DRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQI 118

Query: 912  QDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 733
            QDFASTQSISFGAK +VKLVLLDE+DAMTKDAQFALRRVIEKYT++TRFAL+CN+VNK+I
Sbjct: 119  QDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALVCNNVNKVI 178

Query: 732  PALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQS 553
            PALQSRCTRFRFAPLD VHV+ERL HV++AE LDV + GL ALVRLSNGDMRKALNILQS
Sbjct: 179  PALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQS 238

Query: 552  THMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIR 373
            THMASQQ++E+AVYLCTGNPLPKDIEQIS+WLLNEPFTIS +RIS+IKTRKGLALVDI+R
Sbjct: 239  THMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFTISCKRISEIKTRKGLALVDIVR 298

Query: 372  EVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            EVTMFVF+I MP  VRVQLINE++DIEYRL+FGCN+KLQLGSLI
Sbjct: 299  EVTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQLGSLI 342


>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
          Length = 357

 Score =  567 bits (1460), Expect = e-159
 Identities = 286/344 (83%), Positives = 319/344 (92%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNASRNFKGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIVETI 1093
            MAE IS M++D+D   ++  KGKN+V  + T+ K+ PWVEK RPQSLSDVAAHRDIVETI
Sbjct: 1    MAETISSMDIDDDKIDTKPSKGKNIV--SNTEPKSVPWVEKFRPQSLSDVAAHRDIVETI 58

Query: 1092 DRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQI 913
            DRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQM NMVLELNASDDRGIDVVRQQI
Sbjct: 59   DRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDVVRQQI 118

Query: 912  QDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 733
            QDFASTQSISFGAK +VKLVLLDE+DAMTKDAQFALRRVIE+YT++TRFALICN+VNK+I
Sbjct: 119  QDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNNVNKVI 178

Query: 732  PALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQS 553
            PALQSRCTRFRFAPLD VHV+ERL HV++AE LDV + GL ALVRLSNGDMRKALNILQS
Sbjct: 179  PALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQS 238

Query: 552  THMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIR 373
            THMASQQ++E+AVYLCTGNPLPKDIEQIS+WLLNEPF IS +RIS+IKTRKGLALVDI+R
Sbjct: 239  THMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIVR 298

Query: 372  EVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            EVTMFVF+I MP +VRVQLINE++DIEYRL+FGCN+KLQLGSLI
Sbjct: 299  EVTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLI 342


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  563 bits (1450), Expect = e-158
 Identities = 283/345 (82%), Positives = 312/345 (90%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGN-ASRNFKGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIVET 1096
            MAE ++ M++D + N   +  KGK+VVV    D K TPWVEK+RPQSL+DVAAHRDIV+T
Sbjct: 1    MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDT 60

Query: 1095 IDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQ 916
            IDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG Q HNM+LELNASDDRGIDVVRQQ
Sbjct: 61   IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQ 120

Query: 915  IQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 736
            IQDFASTQS SFGAK SVKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRFALICNHVNKI
Sbjct: 121  IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180

Query: 735  IPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQ 556
            IPALQSRCTRFRFAPLD VHVTERL HVI AE LDV++SGL ALVRLS+GDMRKALNILQ
Sbjct: 181  IPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQ 240

Query: 555  STHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDII 376
            STHMASQQ+TEEAVYLCTGNPLPKDIEQIS+WLLNE F  S+ RIS++K RKGLALVD++
Sbjct: 241  STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVV 300

Query: 375  REVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            REVTMFVF+I MP DVRVQLIN+++DIEYRLSFGCN+KLQLGSLI
Sbjct: 301  REVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLI 345


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  553 bits (1425), Expect = e-155
 Identities = 282/347 (81%), Positives = 314/347 (90%), Gaps = 4/347 (1%)
 Frame = -2

Query: 1269 AEVISPMEVDNDGNASRNFK--GKNVVVSAGT--DSKTTPWVEKHRPQSLSDVAAHRDIV 1102
            AE +S M++D D N +   K  GKNV+VS GT  D K +PWVEK+RPQSL+DVAAHRDIV
Sbjct: 4    AETVSLMDIDEDENKNLKPKDNGKNVIVS-GTPPDIKASPWVEKYRPQSLADVAAHRDIV 62

Query: 1101 ETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVR 922
            +TIDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVR
Sbjct: 63   DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 122

Query: 921  QQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVN 742
            QQIQDFASTQS SFG K SVKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRFALICN VN
Sbjct: 123  QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 182

Query: 741  KIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNI 562
            KIIPALQSRCTRFRFAPL+ VHVTERL HVI+AEGLDVT+ GL ALVRL NGDMRKALNI
Sbjct: 183  KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNI 242

Query: 561  LQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVD 382
            LQSTHMASQQ+TEEAVYLCTGNPLPKDIEQIS+WLLNE F  S++RIS++K RKGLALVD
Sbjct: 243  LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVD 302

Query: 381  IIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            I+REVTMFVF+I MP DVRV+L+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 303  IVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSII 349


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
            gi|557536359|gb|ESR47477.1| hypothetical protein
            CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score =  551 bits (1421), Expect = e-154
 Identities = 282/347 (81%), Positives = 313/347 (90%), Gaps = 4/347 (1%)
 Frame = -2

Query: 1269 AEVISPMEVDNDGNASRNFK--GKNVVVSAGT--DSKTTPWVEKHRPQSLSDVAAHRDIV 1102
            AE +S M+ D D N +   K  GKNV+VS GT  D K +PWVEK+RPQSL+DVAAHRDIV
Sbjct: 4    AETVSLMDFDEDENQNLKPKDNGKNVIVS-GTPPDIKASPWVEKYRPQSLADVAAHRDIV 62

Query: 1101 ETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVR 922
            +TIDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVR
Sbjct: 63   DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 122

Query: 921  QQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVN 742
            QQIQDFASTQS SFG K SVKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRFALICN VN
Sbjct: 123  QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 182

Query: 741  KIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNI 562
            KIIPALQSRCTRFRFAPL+ VHVTERL HVI+AEGLDVT+ GL ALVRL NGDMRKALNI
Sbjct: 183  KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNI 242

Query: 561  LQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVD 382
            LQSTHMASQQ+TEEAVYLCTGNPLPKDIEQIS+WLLNE F  S++RIS++K RKGLALVD
Sbjct: 243  LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVD 302

Query: 381  IIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            I+REVTMFVF+I MP DVRV+L+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 303  IVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSII 349


>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
            arietinum]
          Length = 363

 Score =  551 bits (1419), Expect = e-154
 Identities = 278/341 (81%), Positives = 307/341 (90%), Gaps = 3/341 (0%)
 Frame = -2

Query: 1254 PMEVDNDGNASRNFKGKNVVVSAGTDS---KTTPWVEKHRPQSLSDVAAHRDIVETIDRL 1084
            PM++D   + S N      V+SA   S   K+T WVEK+RPQSL DVAAHRDIV+TIDRL
Sbjct: 8    PMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRL 67

Query: 1083 ASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQDF 904
             + NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVRQQIQDF
Sbjct: 68   TTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDF 127

Query: 903  ASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPAL 724
            ASTQS+SFG K SVKL+LLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII AL
Sbjct: 128  ASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQAL 187

Query: 723  QSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQSTHM 544
            QSRCTRFRFAPLD VHVTERL HVIKAEGLDV DSGL+ALVRLSNGDMRKALNILQSTHM
Sbjct: 188  QSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTHM 247

Query: 543  ASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIREVT 364
            ASQQ+TEEAVYLCTGNPLPKDIEQIS+WLLNE ++ SY+RI DIKTRKGLAL+DI+REVT
Sbjct: 248  ASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREVT 307

Query: 363  MFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            MFVF+I MP  VRVQL+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 308  MFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVI 348


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540562|gb|EEF42129.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 360

 Score =  550 bits (1416), Expect = e-154
 Identities = 277/349 (79%), Positives = 314/349 (89%), Gaps = 5/349 (1%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNASRNF-----KGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRD 1108
            MA+V++ M++D D    +N      KGKNV V    D+K TPWVEK+RPQSL+DVAAHRD
Sbjct: 1    MADVVTIMDIDEDVKEKQNQLSKPNKGKNVFV----DTKATPWVEKYRPQSLADVAAHRD 56

Query: 1107 IVETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDV 928
            IV+TIDRL + NRLPHLLLYGPPGTGKTSTILA+ARKLYG Q HNM+LELNASDDRGIDV
Sbjct: 57   IVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDV 116

Query: 927  VRQQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNH 748
            VRQQIQDFASTQS SF AK +VKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRFALICNH
Sbjct: 117  VRQQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNH 176

Query: 747  VNKIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKAL 568
            VNKIIPALQSRCTRFRFAPLD +HVT+RL HVI+AEGLDV + GL A+VRLSNGDMRKAL
Sbjct: 177  VNKIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKAL 236

Query: 567  NILQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLAL 388
            NILQSTHMASQQ+TEEAV+LCTGNPLPKDI+QIS+WLLNE F  S++RIS+IKT+KGLAL
Sbjct: 237  NILQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLAL 296

Query: 387  VDIIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            VDI+REVTMFVF+I MP DVRVQLIN+++DIEYRLSFGC++KLQLGSL+
Sbjct: 297  VDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLV 345


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 361

 Score =  549 bits (1415), Expect = e-154
 Identities = 277/346 (80%), Positives = 307/346 (88%), Gaps = 2/346 (0%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNASRNFKGKNVVVSAGTDS--KTTPWVEKHRPQSLSDVAAHRDIVE 1099
            MA+   PM++D+    +   KGK+VV +    +  K  PWVEK+RPQSL DVAAHRDIV+
Sbjct: 1    MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60

Query: 1098 TIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQ 919
            TIDRL + NRLPHLLLYGPPGTGKTSTILA+ARKLYGSQ  NM+LELNASDDRGIDVVRQ
Sbjct: 61   TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120

Query: 918  QIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 739
            QIQDFASTQS+SFG K SVKLVLLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHVNK
Sbjct: 121  QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180

Query: 738  IIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNIL 559
            IIPALQSRCTRFRFAPLD VHVTERL HVIKAEGLDV DSGL A VRLSNGDMRKALNIL
Sbjct: 181  IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240

Query: 558  QSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDI 379
            QSTHMASQQ+TEEAVYLCTGNPLPKDIE IS+WLLNE F  S++RI ++KTRKGLAL+DI
Sbjct: 241  QSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300

Query: 378  IREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            +REVTMFVF+I MP  VRVQL+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 301  VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVI 346


>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
            gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
            family protein [Populus trichocarpa]
          Length = 363

 Score =  548 bits (1412), Expect = e-153
 Identities = 278/348 (79%), Positives = 310/348 (89%), Gaps = 4/348 (1%)
 Frame = -2

Query: 1272 MAEVISPMEVD---NDGNASRNFKGKNVVVSAGTDS-KTTPWVEKHRPQSLSDVAAHRDI 1105
            MAE I+ M++D   N  + S+  KGK VVV A     K TPWVEK+RPQSL+DVAAHRDI
Sbjct: 1    MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60

Query: 1104 VETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVV 925
            ++TIDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVV
Sbjct: 61   IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120

Query: 924  RQQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHV 745
            R+QIQDFASTQS SFGAK SVKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRFALICNHV
Sbjct: 121  RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 744  NKIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALN 565
            NKIIPALQSRCTRFRFAPLD +HV ERL HVI+AEGLDV +SGL AL  LSNGDMRKALN
Sbjct: 181  NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240

Query: 564  ILQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALV 385
            ILQSTHMASQQ+TEE VYLCTGNPLP+D++QI+HWLLNE F  SY+RIS+IKTRKGLALV
Sbjct: 241  ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300

Query: 384  DIIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            DI+REVTMFVF+I M  D+RV LIN+++DIEYRLSFGCN+KLQLGSLI
Sbjct: 301  DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLI 348


>gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
          Length = 359

 Score =  546 bits (1408), Expect = e-153
 Identities = 273/340 (80%), Positives = 307/340 (90%), Gaps = 2/340 (0%)
 Frame = -2

Query: 1254 PMEVDNDGNASRNFKGKNVVVSAGTDS--KTTPWVEKHRPQSLSDVAAHRDIVETIDRLA 1081
            PME+D+DG+   +  G+ V+ S    +  K  PWVEK+RPQSL DVAAHRDIV+TID+L 
Sbjct: 5    PMEIDSDGDDHTHSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTIDKLT 64

Query: 1080 SSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQDFA 901
            + NRLPHLLLYGPPGTGKTSTILA+ARKLYGS+  NM+LELNASDDRGIDVVRQQIQDFA
Sbjct: 65   TENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQIQDFA 124

Query: 900  STQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ 721
            STQS+SFG K+SVKLVLLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ
Sbjct: 125  STQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ 184

Query: 720  SRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQSTHMA 541
            SRCTRFRFAPLD VHVTER+ HVIKAEGLDV D GL ALVRLSNGDMRKALNILQSTHMA
Sbjct: 185  SRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQSTHMA 244

Query: 540  SQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIREVTM 361
            +QQ+TEEA+YLCTGNPLPKDIEQIS+WLLNE +T S++RI ++KTRKGLALVDIIREV M
Sbjct: 245  TQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDIIREVIM 304

Query: 360  FVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            FVF+I MP  VRVQL+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 305  FVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVI 344


>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 363

 Score =  546 bits (1408), Expect = e-153
 Identities = 279/348 (80%), Positives = 310/348 (89%), Gaps = 4/348 (1%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNA--SRNFKGKNVVVSAGTDS--KTTPWVEKHRPQSLSDVAAHRDI 1105
            MAE    M++D+D +   +R  K K+VVV++   +  K  PWVEK+RP SL DVAAHRDI
Sbjct: 1    MAETNHHMDIDSDDHTYTARPDKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDI 60

Query: 1104 VETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVV 925
            V+TIDRL + NRLPHLLLYGPPGTGKTSTILA+ARKLYGSQ  NM+LELNASDDRGIDVV
Sbjct: 61   VDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVV 120

Query: 924  RQQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHV 745
            RQQIQDFASTQS+SFG K SVKLVLLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHV
Sbjct: 121  RQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 180

Query: 744  NKIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALN 565
            NKIIPALQSRCTRFRFAPLD VHVTERL HVIKAEGLDV DSGL ALVRLSNGDMRKALN
Sbjct: 181  NKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALN 240

Query: 564  ILQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALV 385
            ILQSTHMASQQ+TEE VYLCTGNPLPKDIEQIS+WLLNE F  S++RI ++KTRKGLALV
Sbjct: 241  ILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALV 300

Query: 384  DIIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            DI+REVT+FVF+I MP  VRVQL+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 301  DIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVI 348


>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
            arietinum]
          Length = 364

 Score =  546 bits (1407), Expect = e-153
 Identities = 278/342 (81%), Positives = 307/342 (89%), Gaps = 4/342 (1%)
 Frame = -2

Query: 1254 PMEVDNDGNASRNFKGKNVVVSAGTDS---KTTPWVEKHRPQSLSDVAAHRDIVETIDRL 1084
            PM++D   + S N      V+SA   S   K+T WVEK+RPQSL DVAAHRDIV+TIDRL
Sbjct: 8    PMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRL 67

Query: 1083 ASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQDF 904
             + NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVRQQIQDF
Sbjct: 68   TTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDF 127

Query: 903  ASTQSISFG-AKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPA 727
            ASTQS+SFG  K SVKL+LLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII A
Sbjct: 128  ASTQSLSFGFVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQA 187

Query: 726  LQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQSTH 547
            LQSRCTRFRFAPLD VHVTERL HVIKAEGLDV DSGL+ALVRLSNGDMRKALNILQSTH
Sbjct: 188  LQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTH 247

Query: 546  MASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIREV 367
            MASQQ+TEEAVYLCTGNPLPKDIEQIS+WLLNE ++ SY+RI DIKTRKGLAL+DI+REV
Sbjct: 248  MASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREV 307

Query: 366  TMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            TMFVF+I MP  VRVQL+N+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 308  TMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVI 349


>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
            gi|449499057|ref|XP_004160708.1| PREDICTED: replication
            factor C subunit 5-like [Cucumis sativus]
          Length = 363

 Score =  546 bits (1407), Expect = e-153
 Identities = 277/348 (79%), Positives = 313/348 (89%), Gaps = 4/348 (1%)
 Frame = -2

Query: 1272 MAEVISPMEVDND-GN--ASRNFKGKNVVV-SAGTDSKTTPWVEKHRPQSLSDVAAHRDI 1105
            M+EVIS M++D+D GN  A +  KGKNV   +A  + K  PWVEK RP+SL+DVAAHRDI
Sbjct: 1    MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 1104 VETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVV 925
            V+TID+L S NRLPHLLLYGPPGTGKTSTILA+ARKLYG+  HNM+LELNASDDRGIDVV
Sbjct: 61   VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 924  RQQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHV 745
            RQQIQDFASTQS SFGAK SVKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRFALICNHV
Sbjct: 121  RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 744  NKIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALN 565
            NKIIPALQSRCTRFRFAPLD  HVTERL +VI+AE LDVT+ GL ALVRL  GDMRKALN
Sbjct: 181  NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN 240

Query: 564  ILQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALV 385
            ILQSTHMASQ +TEEAVYLCTGNP+PKDIEQIS WLLNEPF+ S++RIS+IKTRKGLALV
Sbjct: 241  ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 384  DIIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            DI+REVT+FVF+I MP ++RVQLIN+++DIEYR++FGCN+KLQLGSLI
Sbjct: 301  DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLI 348


>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
            gi|587990838|gb|EXC75062.1| Replication factor C subunit
            5 [Morus notabilis]
          Length = 365

 Score =  541 bits (1395), Expect = e-151
 Identities = 276/350 (78%), Positives = 312/350 (89%), Gaps = 6/350 (1%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNAS-RNFK--GKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIV 1102
            M EV+S M++D+D NA  R+ K   K    +A +D K TPWVEK+RPQSL+DVAAHRDI+
Sbjct: 1    MTEVVSLMDIDDDDNAGDRSAKPINKGKSGAAPSDGKATPWVEKYRPQSLADVAAHRDII 60

Query: 1101 ETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVR 922
            +TIDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVR
Sbjct: 61   DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 120

Query: 921  QQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVN 742
            QQIQDFASTQS SFG K SVKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRF+LICN+VN
Sbjct: 121  QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVN 180

Query: 741  KIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEG---LDVTDSGLNALVRLSNGDMRKA 571
            KIIPALQSRCTRFRFAPLD VHV ERL HVI+AEG   LDV++SGL A VRLSNGDMRKA
Sbjct: 181  KIIPALQSRCTRFRFAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKA 240

Query: 570  LNILQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLA 391
            LNILQSTHMAS+++TEE VYLCTGNPLPKDIEQIS+WLLNE F  S+++IS++K RKGLA
Sbjct: 241  LNILQSTHMASKKITEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLA 300

Query: 390  LVDIIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            LVDI+REVTMFVF+I MP D RVQLIN+++DIEYRLSFGCN+KLQLGSLI
Sbjct: 301  LVDIVREVTMFVFKIKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLI 350


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
            gi|355491087|gb|AES72290.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 355

 Score =  540 bits (1390), Expect = e-151
 Identities = 277/347 (79%), Positives = 308/347 (88%), Gaps = 3/347 (0%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNASRNFKGKNVVVSAGTDS---KTTPWVEKHRPQSLSDVAAHRDIV 1102
            MAE    M++D         KGK V+ +AG  S   K + WVEK+RPQSL DVAAHRDIV
Sbjct: 1    MAEETYAMDIDVTD------KGKTVI-AAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIV 53

Query: 1101 ETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVR 922
            +TIDRL + NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVR
Sbjct: 54   DTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 113

Query: 921  QQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVN 742
            QQIQDFASTQS+SFG K SVKLVLLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHVN
Sbjct: 114  QQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVN 173

Query: 741  KIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNI 562
            KIIPALQSRCTRFRFAPLD VHVTERL HVI AE LDV DSGL+ALVRLSNGDMRKALNI
Sbjct: 174  KIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNI 233

Query: 561  LQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVD 382
            LQSTHMASQQ+TEEAVYLCTGNPLPKDIEQIS+WLLNE ++ S++RI D+KTRKGLAL+D
Sbjct: 234  LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALID 293

Query: 381  IIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            I+REVTMFVF+I MP  VRVQL+N+++DIEYRLSFGCN+KLQLGS++
Sbjct: 294  IVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVV 340


>ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-like [Fragaria vesca subsp.
            vesca]
          Length = 363

 Score =  538 bits (1385), Expect = e-150
 Identities = 272/349 (77%), Positives = 307/349 (87%), Gaps = 5/349 (1%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGN-----ASRNFKGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRD 1108
            MAE+I+PM++D D          N KGKNV VS     + TPWVEK+RPQSL+DVAAHRD
Sbjct: 1    MAELITPMDIDGDDTNPSSLKPNNDKGKNVAVSGPIHGEATPWVEKYRPQSLADVAAHRD 60

Query: 1107 IVETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDV 928
            IV+TIDRLAS NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q   ++LELNASDDRGIDV
Sbjct: 61   IVDTIDRLASENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRKIILELNASDDRGIDV 120

Query: 927  VRQQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNH 748
            VRQQIQ+FAS+Q +    K  VKLVLLDE+DAMTKDAQFALRRVIEKYTK+TRF LICNH
Sbjct: 121  VRQQIQNFASSQGLET-EKVPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNH 179

Query: 747  VNKIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKAL 568
            VNKIIPALQSRCTRFRFAPLD+ HV +RL HVI AEGLDV ++GL A+VRLSNGDMRKAL
Sbjct: 180  VNKIIPALQSRCTRFRFAPLDSFHVKDRLKHVIDAEGLDVFENGLAAVVRLSNGDMRKAL 239

Query: 567  NILQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLAL 388
            NILQSTHMASQ++TEEAVYLCTGNPLPKDIEQISHWLLNE FT +++RISD+KT KGLAL
Sbjct: 240  NILQSTHMASQKITEEAVYLCTGNPLPKDIEQISHWLLNESFTEAFKRISDMKTIKGLAL 299

Query: 387  VDIIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            VDI+REVTMFVF+I MPPDVRV LIN+++DIEYRLSFGCN+KLQLGS+I
Sbjct: 300  VDIVREVTMFVFKIKMPPDVRVLLINDLADIEYRLSFGCNDKLQLGSII 348


>ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutrema salsugineum]
            gi|557086521|gb|ESQ27373.1| hypothetical protein
            EUTSA_v10018756mg [Eutrema salsugineum]
          Length = 361

 Score =  532 bits (1371), Expect = e-148
 Identities = 270/347 (77%), Positives = 309/347 (89%), Gaps = 3/347 (0%)
 Frame = -2

Query: 1272 MAEVISPMEVDNDGNASR--NFKGKNVVVSAGT-DSKTTPWVEKHRPQSLSDVAAHRDIV 1102
            M ++ S M++D D N SR  + KGK++    G   SK TPWVEK+RPQSL DVAAHRDI+
Sbjct: 1    MTDITSAMDIDVDENHSRKPSNKGKDIAGFGGPPQSKATPWVEKYRPQSLDDVAAHRDII 60

Query: 1101 ETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVR 922
            +TIDRL + N+LPHLLLYGPPGTGKTSTILA+ARKLYG +  NM+LELNASDDRGIDVVR
Sbjct: 61   DTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVR 120

Query: 921  QQIQDFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVN 742
            QQIQDFASTQS S G K SVKLVLLDE+DAMTKDAQFALRRVIEKYTKSTRFALI NHVN
Sbjct: 121  QQIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVN 179

Query: 741  KIIPALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNI 562
            KIIPALQSRCTRFRFAPLD VHV++RL HVI+AEGLDV++SGL ALVRLSNGDMRKA+NI
Sbjct: 180  KIIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVSESGLAALVRLSNGDMRKAMNI 239

Query: 561  LQSTHMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVD 382
            LQST+MAS+++TEE VYLCTGNPLP DIEQISHWLLNEPF  SY+ IS++KTRKGLA+VD
Sbjct: 240  LQSTNMASEKITEEEVYLCTGNPLPMDIEQISHWLLNEPFAESYKNISEMKTRKGLAIVD 299

Query: 381  IIREVTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            I+REVTMFVF+I MP +VRVQLIN+++DIEYRLSFGCN+KLQLG++I
Sbjct: 300  IVREVTMFVFKISMPSNVRVQLINDLADIEYRLSFGCNDKLQLGAII 346


>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
            gi|548860608|gb|ERN18175.1| hypothetical protein
            AMTR_s00054p00174840 [Amborella trichopoda]
          Length = 359

 Score =  531 bits (1369), Expect = e-148
 Identities = 269/343 (78%), Positives = 301/343 (87%), Gaps = 4/343 (1%)
 Frame = -2

Query: 1257 SPMEVDNDGNASRNF----KGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIVETID 1090
            SPM+VD +      +    KGK VV       K TPWVEK+RPQSL+DVAAH+DI++T+D
Sbjct: 3    SPMDVDVEREQDMRYLQTGKGK-VVEREQLLPKATPWVEKYRPQSLADVAAHKDIIDTVD 61

Query: 1089 RLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQ 910
            RL + NRLPHLLLYGPPGTGKTST+LA+ARKLYG  + NM+LELNASDDRGIDVVRQQIQ
Sbjct: 62   RLTNENRLPHLLLYGPPGTGKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQIQ 121

Query: 909  DFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 730
            DFASTQS SFGAK SVKLVLLDE+DAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP
Sbjct: 122  DFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 181

Query: 729  ALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQST 550
            ALQSRCTRFRFAPLD  HV ERL +VIKAEGLDV +SGL+A+VRLSNGDMRKALNILQST
Sbjct: 182  ALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQST 241

Query: 549  HMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIRE 370
            HMASQ V+E+AVYLCTGNP+PKD+EQIS+WLLNE F  SY+ ISD+KT KGLALVDI+RE
Sbjct: 242  HMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIVRE 301

Query: 369  VTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            VTMF+F I MP  VRVQLIN+++DIEYRLSFGCN+KLQLGSLI
Sbjct: 302  VTMFIFMIKMPSTVRVQLINDLADIEYRLSFGCNDKLQLGSLI 344


>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 359

 Score =  526 bits (1356), Expect = e-147
 Identities = 264/343 (76%), Positives = 304/343 (88%)
 Frame = -2

Query: 1269 AEVISPMEVDNDGNASRNFKGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIVETID 1090
            A   +PM++D    A   FKGK   +SA    K++PWVEK+RPQSL+DVAAHRDIV+TID
Sbjct: 4    ATAAAPMDIDGAA-APPAFKGK-APLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTID 61

Query: 1089 RLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQ 910
            RL   NRLPHLLLYGPPGTGKTSTILA+ARK+YGSQ  NM+LELNASD+RGI VVRQQIQ
Sbjct: 62   RLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQ 121

Query: 909  DFASTQSISFGAKFSVKLVLLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 730
            DFAS  S+SFGAK +VKLVLLDE+DAMTKDAQFALRRVIEKYT+STRFALICNHVNKIIP
Sbjct: 122  DFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIP 181

Query: 729  ALQSRCTRFRFAPLDTVHVTERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQST 550
            ALQSRCTRFRFAPLD  HV+ERL H+IK+EGLDV + GL+ALVRLSNGDMRK+LNILQST
Sbjct: 182  ALQSRCTRFRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQST 241

Query: 549  HMASQQVTEEAVYLCTGNPLPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIRE 370
            HMASQQ+TEEAVYLCTGNP+PKDIEQI+ WLLNEPF+ S++ I+D+K RKGLAL+DIIRE
Sbjct: 242  HMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIRE 301

Query: 369  VTMFVFRIMMPPDVRVQLINEISDIEYRLSFGCNEKLQLGSLI 241
            VTMFVF+I MP  VRV+LIN+++DIEYRL+F CN+KLQLG+LI
Sbjct: 302  VTMFVFKIKMPSSVRVKLINDLADIEYRLTFACNDKLQLGALI 344


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  524 bits (1350), Expect = e-146
 Identities = 262/324 (80%), Positives = 293/324 (90%)
 Frame = -2

Query: 1212 KGKNVVVSAGTDSKTTPWVEKHRPQSLSDVAAHRDIVETIDRLASSNRLPHLLLYGPPGT 1033
            KGK ++ + G   +  PWVEK+RPQSL+DVAAHRDIV+TIDRL + NRLPHLLLYGPPGT
Sbjct: 27   KGKALLSAGG---RAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 83

Query: 1032 GKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQDFASTQSISFGAKFSVKLV 853
            GKTSTILA+ARKLYGSQ  NM+LELNASD+RGIDVVRQQIQDFA  +S+SFGA+ SVKLV
Sbjct: 84   GKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGARSLSFGARPSVKLV 143

Query: 852  LLDESDAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDTVHV 673
            LLDE+DAMTKDAQFALRRVIEKYT+STRFALICNHVNKIIPALQSRCTRFRFAPLD  HV
Sbjct: 144  LLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSHV 203

Query: 672  TERLNHVIKAEGLDVTDSGLNALVRLSNGDMRKALNILQSTHMASQQVTEEAVYLCTGNP 493
             ERL H+IK+EGL V D GL ALVRLSNGDMRKALNILQSTHMASQQ+TEEAVYLCTGNP
Sbjct: 204  RERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNP 263

Query: 492  LPKDIEQISHWLLNEPFTISYRRISDIKTRKGLALVDIIREVTMFVFRIMMPPDVRVQLI 313
            +PKDIEQI+ WLLNEPF+ S++ ISD+K RKGLALVDIIREVTMFVF+I MP DVRV+LI
Sbjct: 264  MPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLI 323

Query: 312  NEISDIEYRLSFGCNEKLQLGSLI 241
            N ++DIEYRLSF CN+KLQLG+LI
Sbjct: 324  NNLADIEYRLSFACNDKLQLGALI 347