BLASTX nr result
ID: Catharanthus22_contig00002762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00002762
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006388122.1| hypothetical protein POPTR_0323s00200g [Popu... 88 1e-15
gb|ABK95608.1| unknown [Populus trichocarpa] 87 2e-15
ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Popu... 86 5e-15
ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|5... 86 5e-15
ref|XP_002300149.2| hypothetical protein POPTR_0001s32720g [Popu... 84 1e-14
gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus... 78 1e-12
gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamari... 78 1e-12
gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor] 77 2e-12
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [... 77 3e-12
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin... 75 1e-11
gb|AFK48773.1| unknown [Lotus japonicus] 74 2e-11
ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycin... 74 2e-11
gb|AFK47118.1| unknown [Lotus japonicus] 74 3e-11
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe... 72 8e-11
ref|XP_004502236.1| PREDICTED: glycine-rich RNA-binding protein ... 70 2e-10
ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago t... 70 4e-10
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa... 69 5e-10
ref|XP_004297041.1| PREDICTED: glycine-rich RNA-binding protein ... 69 8e-10
gb|EXB39885.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 68 1e-09
ref|XP_006284571.1| hypothetical protein CARUB_v10005796mg, part... 68 1e-09
>ref|XP_006388122.1| hypothetical protein POPTR_0323s00200g [Populus trichocarpa]
gi|550309536|gb|ERP47036.1| hypothetical protein
POPTR_0323s00200g [Populus trichocarpa]
Length = 145
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SMLNSIRCMSS KLF+GGLPWS +D+ L++AF+ FG
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMLNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFG 60
Query: 311 EVT 319
EVT
Sbjct: 61 EVT 63
>gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SM+NSIRCMSS KLF+GGLPWS +D+ L++AF+ FG
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMVNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFG 60
Query: 311 EVT 319
EVT
Sbjct: 61 EVT 63
>ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Populus trichocarpa]
gi|550309538|gb|ERP47038.1| hypothetical protein
POPTR_0323s00210g [Populus trichocarpa]
Length = 134
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SMLN+IRCMSS KLF+GGLPWSA+D L+EAF+ +G
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|566212207|ref|XP_006373086.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus
trichocarpa] gi|550319792|gb|ERP50883.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
Length = 131
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+ GS++++S QVP+ASMLNSIRCMSS KLF+GGL WS +D+ L++AF+ FG
Sbjct: 1 MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFG 60
Query: 311 EVT 319
EVT
Sbjct: 61 EVT 63
>ref|XP_002300149.2| hypothetical protein POPTR_0001s32720g [Populus trichocarpa]
gi|550348727|gb|EEE84954.2| hypothetical protein
POPTR_0001s32720g [Populus trichocarpa]
Length = 133
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SMLN+IRCMSS KLF+GGLPWS +D L+EAF+ +G
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSTDDHTLKEAFSGYG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus vulgaris]
Length = 135
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/62 (54%), Positives = 49/62 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA +N++G++L++ + TQ PV+SMLN IRCMSS KLFVGGL + +D+ LR+AFA +G
Sbjct: 1 MAFYNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFAGYG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA NR+GS++ R +V+ P+ SMLNSIRCMSS +LFVGGL W +D+ L++AF+SFG
Sbjct: 1 MAFCNRIGSLI-RQTVSQNSAPIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFG 59
Query: 311 EVT 319
EVT
Sbjct: 60 EVT 62
>gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/63 (57%), Positives = 50/63 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MALFN +G++LK+ +V + + SM+NSIRCMSS KLF+GGL W +D+ L++AFASFG
Sbjct: 1 MALFN-IGNLLKQKAVTAGPMSMTSMMNSIRCMSSSKLFIGGLSWGTDDQSLKDAFASFG 59
Query: 311 EVT 319
+VT
Sbjct: 60 DVT 62
>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 134
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/62 (54%), Positives = 49/62 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++GS++++S +VPV+SMLNSIRCMSS KLF+GGL + ND+ L++AF+ FG
Sbjct: 1 MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/62 (51%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + TQ PV+SMLN IRCMSS KLF+GGL + +D+ L++AF+ FG
Sbjct: 1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++++ +Q PVASMLN IRCMSS KLF+GGL + +D+ L +AF+SFG
Sbjct: 1 MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60
Query: 311 EV 316
V
Sbjct: 61 TV 62
>ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|571541384|ref|XP_006601750.1| PREDICTED:
uncharacterized protein LOC100499841 isoform X1 [Glycine
max] gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + T PVASMLN IRCMSS KLF+GGL + +D+ L++AF+ FG
Sbjct: 1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|AFK47118.1| unknown [Lotus japonicus]
Length = 146
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/62 (53%), Positives = 47/62 (75%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + +Q PVASMLN IRCMSS KLF+GGL + +D+ L +AF+SFG
Sbjct: 1 MAFLNKVGNVLRQGAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60
Query: 311 EV 316
V
Sbjct: 61 TV 62
>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
Length = 135
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++GS+L+ S Q P+ASMLN+ RCMSS KLF+GGL + +DE L+EAF+SFG
Sbjct: 1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFG 59
Query: 311 EVT 319
+VT
Sbjct: 60 DVT 62
>ref|XP_004502236.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cicer arietinum]
Length = 146
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G+IL++ + + PV+SMLN +R MS KLF+GGL + +D+ LR+AFASFG
Sbjct: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding
protein [Medicago truncatula]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/62 (48%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + TQ PV+SMLN +R MSS KLF+GGL ++ +D+ LR+AF ++G
Sbjct: 1 MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
protein [Pisum sativum]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/62 (50%), Positives = 47/62 (75%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N+LG++L++ + + PV+SMLN +R MSS KLF+GGL + +D+ L++AFAS+G
Sbjct: 1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>ref|XP_004297041.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 143
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/63 (55%), Positives = 47/63 (74%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA +NR+GS+L++ Q P+ASMLNS R MSS KLF+GGL +S +D L+EAF+ FG
Sbjct: 1 MAFYNRVGSLLRQGISQNGQAPMASMLNSARYMSS-KLFIGGLSFSTDDTSLKEAFSGFG 59
Query: 311 EVT 319
+VT
Sbjct: 60 DVT 62
>gb|EXB39885.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 151
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNSIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA +++G +L++S Q P+ SMLNSIR MS+ KLFVGGL + +D+ L++AF+ FG
Sbjct: 1 MAFLSKIGGVLRQSVAQNVQAPMPSMLNSIRWMSTSKLFVGGLSFGTDDQSLKDAFSGFG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>ref|XP_006284571.1| hypothetical protein CARUB_v10005796mg, partial [Capsella rubella]
gi|482553276|gb|EOA17469.1| hypothetical protein
CARUB_v10005796mg, partial [Capsella rubella]
Length = 194
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 10/84 (11%)
Frame = +2
Query: 95 HFFVRFLG*H---------FQMALFNRLGSILKRS-SVAGTQVPVASMLNSIRCMSSQKL 244
HF FL H +MA N+LG +L+++ S +G VPV SML S+R MS+ KL
Sbjct: 17 HFLCLFLRSHKNPNFKSSFTRMAFCNKLGGLLRQNISPSGGNVPVTSMLGSLRLMST-KL 75
Query: 245 FVGGLPWSANDEVLREAFASFGEV 316
FVGGL W +D+ LR+AFA FGEV
Sbjct: 76 FVGGLSWGTDDQSLRDAFAHFGEV 99