BLASTX nr result
ID: Catharanthus22_contig00002761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00002761
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006388122.1| hypothetical protein POPTR_0323s00200g [Popu... 87 2e-15
gb|ABK95608.1| unknown [Populus trichocarpa] 86 5e-15
ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Popu... 86 7e-15
ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|5... 85 1e-14
ref|XP_002300149.2| hypothetical protein POPTR_0001s32720g [Popu... 84 2e-14
gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus... 78 1e-12
gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamari... 77 2e-12
gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor] 76 4e-12
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [... 75 7e-12
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin... 75 1e-11
gb|AFK48773.1| unknown [Lotus japonicus] 74 2e-11
ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycin... 74 2e-11
gb|AFK47118.1| unknown [Lotus japonicus] 74 3e-11
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe... 73 3e-11
ref|XP_004502236.1| PREDICTED: glycine-rich RNA-binding protein ... 70 2e-10
ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago t... 70 4e-10
ref|XP_004239853.1| PREDICTED: glycine-rich RNA-binding protein ... 69 5e-10
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa... 69 5e-10
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca] 69 5e-10
dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris] gi|29... 69 6e-10
>ref|XP_006388122.1| hypothetical protein POPTR_0323s00200g [Populus trichocarpa]
gi|550309536|gb|ERP47036.1| hypothetical protein
POPTR_0323s00200g [Populus trichocarpa]
Length = 145
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SMLN+IRCMSS KLF+GGLPWS +D+ L++AF+ FG
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMLNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFG 60
Query: 311 EVT 319
EVT
Sbjct: 61 EVT 63
>gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 85.9 bits (211), Expect = 5e-15
Identities = 38/63 (60%), Positives = 51/63 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SM+N+IRCMSS KLF+GGLPWS +D+ L++AF+ FG
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMVNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFG 60
Query: 311 EVT 319
EVT
Sbjct: 61 EVT 63
>ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Populus trichocarpa]
gi|550309538|gb|ERP47038.1| hypothetical protein
POPTR_0323s00210g [Populus trichocarpa]
Length = 134
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SMLN IRCMSS KLF+GGLPWSA+D L+EAF+ +G
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|566212207|ref|XP_006373086.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus
trichocarpa] gi|550319792|gb|ERP50883.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
Length = 131
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/63 (60%), Positives = 51/63 (80%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+ GS++++S QVP+ASMLN+IRCMSS KLF+GGL WS +D+ L++AF+ FG
Sbjct: 1 MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFG 60
Query: 311 EVT 319
EVT
Sbjct: 61 EVT 63
>ref|XP_002300149.2| hypothetical protein POPTR_0001s32720g [Populus trichocarpa]
gi|550348727|gb|EEE84954.2| hypothetical protein
POPTR_0001s32720g [Populus trichocarpa]
Length = 133
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA FN+LGS+ ++S QVP+ SMLN IRCMSS KLF+GGLPWS +D L+EAF+ +G
Sbjct: 1 MAFFNKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSTDDHTLKEAFSGYG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus vulgaris]
Length = 135
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/62 (54%), Positives = 49/62 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA +N++G++L++ + TQ PV+SMLN IRCMSS KLFVGGL + +D+ LR+AFA +G
Sbjct: 1 MAFYNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFAGYG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/63 (57%), Positives = 49/63 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA NR+GS++ R +V+ P+ SMLN+IRCMSS +LFVGGL W +D+ L++AF+SFG
Sbjct: 1 MAFCNRIGSLI-RQTVSQNSAPIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFG 59
Query: 311 EVT 319
EVT
Sbjct: 60 EVT 62
>gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/63 (55%), Positives = 50/63 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MALFN +G++LK+ +V + + SM+N+IRCMSS KLF+GGL W +D+ L++AFASFG
Sbjct: 1 MALFN-IGNLLKQKAVTAGPMSMTSMMNSIRCMSSSKLFIGGLSWGTDDQSLKDAFASFG 59
Query: 311 EVT 319
+VT
Sbjct: 60 DVT 62
>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 134
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++GS++++S +VPV+SMLN+IRCMSS KLF+GGL + ND+ L++AF+ FG
Sbjct: 1 MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/62 (51%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + TQ PV+SMLN IRCMSS KLF+GGL + +D+ L++AF+ FG
Sbjct: 1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++++ +Q PVASMLN IRCMSS KLF+GGL + +D+ L +AF+SFG
Sbjct: 1 MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60
Query: 311 EV 316
V
Sbjct: 61 TV 62
>ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|571541384|ref|XP_006601750.1| PREDICTED:
uncharacterized protein LOC100499841 isoform X1 [Glycine
max] gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + T PVASMLN IRCMSS KLF+GGL + +D+ L++AF+ FG
Sbjct: 1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>gb|AFK47118.1| unknown [Lotus japonicus]
Length = 146
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/62 (53%), Positives = 47/62 (75%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + +Q PVASMLN IRCMSS KLF+GGL + +D+ L +AF+SFG
Sbjct: 1 MAFLNKVGNVLRQGAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60
Query: 311 EV 316
V
Sbjct: 61 TV 62
>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
Length = 135
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++GS+L+ S Q P+ASMLNA RCMSS KLF+GGL + +DE L+EAF+SFG
Sbjct: 1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFG 59
Query: 311 EVT 319
+VT
Sbjct: 60 DVT 62
>ref|XP_004502236.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cicer arietinum]
Length = 146
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G+IL++ + + PV+SMLN +R MS KLF+GGL + +D+ LR+AFASFG
Sbjct: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding
protein [Medicago truncatula]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/62 (48%), Positives = 48/62 (77%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N++G++L++ + TQ PV+SMLN +R MSS KLF+GGL ++ +D+ LR+AF ++G
Sbjct: 1 MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYG 60
Query: 311 EV 316
+V
Sbjct: 61 DV 62
>ref|XP_004239853.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum lycopersicum]
Length = 161
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQV----PVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAF 298
MA N+LG +L++S G V P +MLNAIRCMSS KLFVGGL W +D+ L+EAF
Sbjct: 1 MAFCNKLGGLLRQSISTGNAVSANSPTPAMLNAIRCMSS-KLFVGGLSWGTDDQSLKEAF 59
Query: 299 ASFGEV 316
SFG+V
Sbjct: 60 TSFGDV 65
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
protein [Pisum sativum]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/62 (50%), Positives = 47/62 (75%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQVPVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAFASFG 310
MA N+LG++L++ + + PV+SMLN +R MSS KLF+GGL + +D+ L++AFAS+G
Sbjct: 1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60
Query: 311 EV 316
EV
Sbjct: 61 EV 62
>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQV----PVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAF 298
MA +N+LG +L R S++G V P+ SML+AIRCMS+ KLFVGGL W +D+ LR+AF
Sbjct: 1 MAFYNKLGGLL-RQSISGNAVSATSPMPSMLDAIRCMST-KLFVGGLSWGTDDQSLRDAF 58
Query: 299 ASFGEV 316
A+FG+V
Sbjct: 59 ATFGDV 64
>dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich
protein [Nicotiana tabacum] gi|399931789|gb|AFP57444.1|
RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich
protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich
protein [Nicotiana alata] gi|399931809|gb|AFP57454.1|
RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +2
Query: 131 MALFNRLGSILKRSSVAGTQV----PVASMLNAIRCMSSQKLFVGGLPWSANDEVLREAF 298
MA +N+LG +L R S++G V P+ SML+A+RCMS+ KLFVGGL W +D+ LR+AF
Sbjct: 1 MAFYNKLGGLL-RQSISGNAVSATSPMPSMLDAVRCMST-KLFVGGLSWGTDDQSLRDAF 58
Query: 299 ASFGEV 316
A+FG+V
Sbjct: 59 ATFGDV 64