BLASTX nr result
ID: Catharanthus22_contig00002467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00002467
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o... 68 6e-11
gb|EXB56249.1| Chlorophyll a-b binding protein of LHCII type III... 72 8e-11
ref|XP_004238472.1| PREDICTED: chlorophyll a-b binding protein o... 63 1e-10
ref|XP_002307004.1| chlorophyll A-B binding family protein [Popu... 70 3e-10
ref|XP_006342200.1| PREDICTED: chlorophyll a-b binding protein o... 63 3e-10
ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin... 70 4e-10
ref|XP_004499328.1| PREDICTED: chlorophyll a-b binding protein t... 69 5e-10
ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R... 69 5e-10
gb|ESW32583.1| hypothetical protein PHAVU_001G000400g [Phaseolus... 67 2e-09
ref|XP_004499329.1| PREDICTED: chlorophyll a-b binding protein t... 67 3e-09
ref|XP_006390178.1| hypothetical protein EUTSA_v10018862mg [Eutr... 66 4e-09
ref|XP_004301607.1| PREDICTED: chlorophyll a-b binding protein o... 66 4e-09
ref|XP_002887646.1| chlorophyll A-B binding family protein [Arab... 66 5e-09
ref|NP_177783.1| chlorophyll A-B binding family protein [Arabido... 62 1e-08
ref|XP_006490396.1| PREDICTED: chlorophyll a-b binding protein 1... 65 1e-08
ref|XP_006490395.1| PREDICTED: chlorophyll a-b binding protein 1... 65 1e-08
ref|XP_006421927.1| hypothetical protein CICLE_v10006886mg, part... 65 1e-08
gb|EMJ10548.1| hypothetical protein PRUPE_ppa008546mg [Prunus pe... 65 1e-08
dbj|BAK02397.1| predicted protein [Hordeum vulgare subsp. vulgar... 64 2e-08
ref|XP_006302513.1| hypothetical protein CARUB_v10020611mg, part... 64 2e-08
>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic [Vitis vinifera]
gi|297745621|emb|CBI40786.3| unnamed protein product
[Vitis vinifera]
Length = 331
Score = 68.2 bits (165), Expect(2) = 6e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVL+FSAIPFTAVKAIANSPLGESLQ RMEE KK
Sbjct: 51 ELAGVLIFSAIPFTAVKAIANSPLGESLQSRMEENKK 87
Score = 24.3 bits (51), Expect(2) = 6e-11
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 265 KIQEQKNRHIFSNA-FSRYKASWQEVHAWYTFS 170
KI K+R++ S + +S KASWQE+ FS
Sbjct: 27 KISWPKSRNVNSTSTYSGCKASWQELAGVLIFS 59
>gb|EXB56249.1| Chlorophyll a-b binding protein of LHCII type III [Morus notabilis]
Length = 289
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/46 (82%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
S L +W ELAGVLVFSAIPFTAVKA+ANSPLGESLQRR+EERKK
Sbjct: 50 SSLCKASWQELAGVLVFSAIPFTAVKALANSPLGESLQRRLEERKK 95
>ref|XP_004238472.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Solanum lycopersicum]
Length = 318
Score = 63.2 bits (152), Expect(2) = 1e-10
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVLVFSAIPFTAVKAIANS GE+L++R+EERKK
Sbjct: 38 ELAGVLVFSAIPFTAVKAIANSTFGETLRKRLEERKK 74
Score = 28.1 bits (61), Expect(2) = 1e-10
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = -2
Query: 250 KNRHIFSNA-----FSRYKASWQEVHAWYTFS 170
K++ ++ NA FSR+KASWQE+ FS
Sbjct: 15 KDQRLYRNASALDPFSRHKASWQELAGVLVFS 46
>ref|XP_002307004.1| chlorophyll A-B binding family protein [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| chlorophyll A-B binding
family protein [Populus trichocarpa]
Length = 338
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGV++FSAIPFTAVKAIANSPLGESLQRR+EERKK
Sbjct: 58 ELAGVVIFSAIPFTAVKAIANSPLGESLQRRLEERKK 94
>ref|XP_006342200.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Solanum tuberosum]
Length = 318
Score = 63.2 bits (152), Expect(2) = 3e-10
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVLVFSAIPFTAVKAIANS GE+L++R+EERKK
Sbjct: 38 ELAGVLVFSAIPFTAVKAIANSTFGETLRKRLEERKK 74
Score = 26.9 bits (58), Expect(2) = 3e-10
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = -2
Query: 250 KNRHIFSNA-----FSRYKASWQEVHAWYTFS 170
K++ ++ NA FSR++ASWQE+ FS
Sbjct: 15 KDQRLYRNASALDPFSRHRASWQELAGVLVFS 46
>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
gi|255636882|gb|ACU18774.1| unknown [Glycine max]
Length = 331
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/45 (80%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERK 4
S + +W ELAGVL+FSAIPFTAVKAIANSPLGESLQR+MEERK
Sbjct: 38 SSFITASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERK 82
>ref|XP_004499328.1| PREDICTED: chlorophyll a-b binding protein type 1 member F3,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 336
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/45 (80%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERK 4
S + +W ELAGVL+FSAIPFTAVKAIANSPLGESLQR+MEERK
Sbjct: 44 SFICNASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERK 88
>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 329
Score = 68.6 bits (166), Expect(2) = 5e-10
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVLVFSAIPFTAVKA+ANSPLGESLQRR+EE KK
Sbjct: 49 ELAGVLVFSAIPFTAVKALANSPLGESLQRRLEESKK 85
Score = 20.8 bits (42), Expect(2) = 5e-10
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 229 NAFSRYKASWQEVHAWYTFS 170
N S KASWQE+ FS
Sbjct: 38 NPSSPCKASWQELAGVLVFS 57
>gb|ESW32583.1| hypothetical protein PHAVU_001G000400g [Phaseolus vulgaris]
Length = 329
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/53 (67%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -3
Query: 156 RPTINCLSILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
+P+ +C + +W ELAGVL+FSAIPFTAVKAIANSPLGE LQR+MEE+KK
Sbjct: 34 QPSFSCNA-----SWQELAGVLLFSAIPFTAVKAIANSPLGELLQRKMEEKKK 81
>ref|XP_004499329.1| PREDICTED: chlorophyll a-b binding protein type 1 member F3,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 289
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = -3
Query: 108 LAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERK 4
LAGVL+FSAIPFTAVKAIANSPLGESLQR+MEERK
Sbjct: 7 LAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERK 41
>ref|XP_006390178.1| hypothetical protein EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086612|gb|ESQ27464.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
Length = 326
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = -3
Query: 159 RRPTINCLSILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERK 4
RR T+ + +W ELAGVLVFSAIPFTAVKAIANS LGESL+RR+EE+K
Sbjct: 30 RRITVTKSRSICRASWQELAGVLVFSAIPFTAVKAIANSSLGESLRRRLEEKK 82
>ref|XP_004301607.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 308
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/44 (77%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Frame = -3
Query: 129 LLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
L +W EL GV+VFSA+PFTAVKAIANS LGESLQRR+EERKK
Sbjct: 40 LCTASWQELVGVVVFSAVPFTAVKAIANSALGESLQRRLEERKK 83
>ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata] gi|297333487|gb|EFH63905.1| chlorophyll A-B
binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVLVFSAIPFTAVKAIANS LGESL+RR+EE+KK
Sbjct: 51 ELAGVLVFSAIPFTAVKAIANSSLGESLRRRLEEKKK 87
>ref|NP_177783.1| chlorophyll A-B binding family protein [Arabidopsis thaliana]
gi|12323973|gb|AAG51944.1|AC015450_5 putative
chlorophyll A-B binding protein; 65434-67056
[Arabidopsis thaliana] gi|332197739|gb|AEE35860.1|
chlorophyll A-B binding family protein [Arabidopsis
thaliana]
Length = 327
Score = 62.4 bits (150), Expect(2) = 1e-08
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVLVFSAIPFTAVKAIANS +G SL+RR+EE+KK
Sbjct: 48 ELAGVLVFSAIPFTAVKAIANSSIGVSLRRRLEEKKK 84
Score = 22.3 bits (46), Expect(2) = 1e-08
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 277 LIRQKIQEQKNRHIFSNAFSRYKASWQEVHAWYTFS 170
L R + + +NR + + S +ASWQE+ FS
Sbjct: 21 LPRILVSKPRNRIAVTKSRSICRASWQELAGVLVFS 56
>ref|XP_006490396.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 338
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
S++ +W ELAGVLVFSAIPFTAVKAIANSPLGE LQ RM E KK
Sbjct: 49 SLVCKASWQELAGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKK 94
>ref|XP_006490395.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 388
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
S++ +W ELAGVLVFSAIPFTAVKAIANSPLGE LQ RM E KK
Sbjct: 49 SLVCKASWQELAGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKK 94
>ref|XP_006421927.1| hypothetical protein CICLE_v10006886mg, partial [Citrus clementina]
gi|557523800|gb|ESR35167.1| hypothetical protein
CICLE_v10006886mg, partial [Citrus clementina]
Length = 300
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
S++ +W ELAGVLVFSAIPFTAVKAIANSPLGE LQ RM E KK
Sbjct: 49 SLVCKASWQELAGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKK 94
>gb|EMJ10548.1| hypothetical protein PRUPE_ppa008546mg [Prunus persica]
Length = 327
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
EL GV+VFSAIPFTAVKAIANS +GESLQRR+EERKK
Sbjct: 47 ELVGVVVFSAIPFTAVKAIANSAVGESLQRRLEERKK 83
>dbj|BAK02397.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508330|dbj|BAJ99432.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 310
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/45 (73%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 135 SILLLGTW-ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERK 4
S+ + +W ELAGVLVFSA+PFTAVKAIANSPLG SL+RR+E RK
Sbjct: 23 SMRVRASWQELAGVLVFSAVPFTAVKAIANSPLGASLRRRLESRK 67
>ref|XP_006302513.1| hypothetical protein CARUB_v10020611mg, partial [Capsella rubella]
gi|482571223|gb|EOA35411.1| hypothetical protein
CARUB_v10020611mg, partial [Capsella rubella]
Length = 337
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -3
Query: 111 ELAGVLVFSAIPFTAVKAIANSPLGESLQRRMEERKK 1
ELAGVL+FSAIPFTAVKAIANS LGESL+ R+EERKK
Sbjct: 58 ELAGVLIFSAIPFTAVKAIANSSLGESLRLRLEERKK 94