BLASTX nr result
ID: Catharanthus22_contig00002068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00002068
(4560 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1988 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1978 0.0
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1939 0.0
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 1862 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1848 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1808 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1787 0.0
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 1760 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1752 0.0
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 1749 0.0
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1739 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1738 0.0
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 1726 0.0
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 1703 0.0
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 1686 0.0
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 1685 0.0
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 1682 0.0
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 1681 0.0
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 1677 0.0
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 1669 0.0
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 1988 bits (5149), Expect = 0.0
Identities = 1011/1395 (72%), Positives = 1149/1395 (82%), Gaps = 5/1395 (0%)
Frame = +2
Query: 188 QATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLD 367
Q + Q TKQPYIEDVGPR+I+SI FS ESEILK+AEVEVY G+YY+ +KKPI++GLLD
Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64
Query: 368 PHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLL 547
P MGP K G CETCHG F +CPGHYGYL L LPVY+ GYL ++DILKCICK CSS+LL
Sbjct: 65 PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124
Query: 548 GEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNT 727
+K+R L++MRNP+ E L K++L KKVV++CN + A G+K CS+CG++NGMVKK
Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAM-AGGQKTATCSKCGYMNGMVKK-- 181
Query: 728 KMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCEL 907
L I HE+ + +E A+S +E AS V+VP E++PKVVYSL KN+ DEDCEL
Sbjct: 182 LQLKITHEQG---NRILDEINVAISDKRELRAS-VSVPPELDPKVVYSLFKNMSDEDCEL 237
Query: 908 LYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDT 1087
LYLSDRPEKL+ DGGTQSNENDITERLKRIIQANASLHQE+SD+
Sbjct: 238 LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS 297
Query: 1088 SLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKR 1267
S P KSLN WIDLQ+EVAQYINSDVRG+P QA RPLSGF QRLKGKQGRFRGNLSGKR
Sbjct: 298 S-PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKR 356
Query: 1268 VEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKF 1447
VEYTGRTVISPDPNLKITEVA+PIL+A+ILTYPERVS HNIEKLRQCVRNGPNKYPGAKF
Sbjct: 357 VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKF 416
Query: 1448 IKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIM 1627
I+ P ISL+ +RKR+ADELKFG IVDRHLEDGD +LFNRQPSLHRMSIM HRARIM
Sbjct: 417 IRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 476
Query: 1628 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS 1807
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+GEILVAS
Sbjct: 477 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVAS 536
Query: 1808 TQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVL 1987
TQDFLTSSFLITRKDTFY+RASFSLICSYMGD MDP DLP+PA +KPVELWTGKQLF++L
Sbjct: 537 TQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHML 596
Query: 1988 LRPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGL 2167
LRP++KMRVY+NLTV EK+Y ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL
Sbjct: 597 LRPYSKMRVYVNLTVTEKSYSGKG-ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655
Query: 2168 YSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGK 2347
YSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P + L+ +K+ EI Y K
Sbjct: 656 YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715
Query: 2348 CDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQC 2527
C+D I ++N+GKL +QPG DA TLEA++T LN +R + K+CM L WRNSPLIMSQC
Sbjct: 716 CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775
Query: 2528 GSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLT 2707
GSKGSPINISQM+ACVGQQSVGGRRAP+GF+DRSLPHFP KSK P AKGFVA+SF+ GL+
Sbjct: 776 GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835
Query: 2708 ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYG 2887
ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL++ YD TVRNASA I+QF+YG
Sbjct: 836 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895
Query: 2888 DDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEG 3067
DD MDP+QMEEK G+PLNF R+ MKVKATCP G E SLS SEIC+ +ERLS HDMTPEG
Sbjct: 896 DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955
Query: 3068 GCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLE 3247
GCSEAFR SLS FL + +L+N ++L + ++ G+DR LEK NISGIT RQL+
Sbjct: 956 GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015
Query: 3248 VFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 3427
VFL CISRYH K+ EPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1016 VFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1075
Query: 3428 IIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITL 3607
II+A K I+TPIIT KL N AR++KARIEKTLL QVAKS+KIV+++RLASI I+L
Sbjct: 1076 IINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISL 1135
Query: 3608 DIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTI 3787
D+ IQ +L +DAY VKQSILQT K+KLKE +KVLN +KLEV PQA+K KLHFELH +
Sbjct: 1136 DMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRL 1195
Query: 3788 KNKLPMVVVSGIDTVERVIINKE---DKEKEM--PKYNLFVEGMGLLGVMGTEGVNGCET 3952
KNKLP VVV GI TV+R ++NKE D++ ++ Y L VEG GLL VMG EGV+G T
Sbjct: 1196 KNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYT 1255
Query: 3953 KSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRT 4132
KSNHIMEV TLGIEAAR +IIDEI TMSSHGMTID+RHMMLLADLMT KGEVLGITR
Sbjct: 1256 KSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRH 1315
Query: 4133 GVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRM 4312
GVQKMKDSVLMLASFEKT DHLF+A+VNGR+DKIEGV+ECIIMGIPM +GTGM K+RQR+
Sbjct: 1316 GVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRV 1375
Query: 4313 QQQEVKLNYALDPII 4357
+Q V+LNY DPII
Sbjct: 1376 EQ--VELNYQPDPII 1388
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 1978 bits (5124), Expect = 0.0
Identities = 1005/1396 (71%), Positives = 1149/1396 (82%), Gaps = 5/1396 (0%)
Frame = +2
Query: 185 AQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLL 364
AQ + Q TKQPYIEDVGPR+I+SI FS ESEILK AEVEVY G+YY+ +KKPI++GLL
Sbjct: 4 AQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNGLL 63
Query: 365 DPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLL 544
DP MGP K G CETCHG F +CPGHYGYL L LPVY+ GYL ++DILKCICK CSS+L
Sbjct: 64 DPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSIL 123
Query: 545 LGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKN 724
L +K+R L++MRNP+ E L K++L K+VV++CN + A G+K CS+CG++NGMVKK
Sbjct: 124 LDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAM-AGGQKTATCSKCGYMNGMVKK- 181
Query: 725 TKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCE 904
L I HE+ + +E A+S +E AS V+VP E++PKVVYSL KN+ DEDCE
Sbjct: 182 -LQLKITHEQG---NRILDEINVAISDKRELRAS-VSVPPEIDPKVVYSLFKNMSDEDCE 236
Query: 905 LLYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISD 1084
LLYLSDRPEKL+ DGGTQSNENDITERLKRIIQANASLHQE+SD
Sbjct: 237 LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296
Query: 1085 TSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGK 1264
+S P KSLN WIDLQ+EVAQYINSDVRG+P Q RPLSGF QRLKGKQGRFRGNLSGK
Sbjct: 297 SS-PVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGK 355
Query: 1265 RVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 1444
RVEYTGRTVISPDPNLKITEVA+PIL+A+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK
Sbjct: 356 RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415
Query: 1445 FIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARI 1624
FI+ P + +SL+ ++RKRYADELKFG IVDRHLEDGD +LFNRQPSLHRMSIM HRARI
Sbjct: 416 FIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475
Query: 1625 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVA 1804
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+GEILVA
Sbjct: 476 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535
Query: 1805 STQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNV 1984
STQDFLTSSFLITRKDTFY+RASFSLICSYMGD MDP DLP+PA +KPVELWTGKQLF+V
Sbjct: 536 STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHV 595
Query: 1985 LLRPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 2164
LLRP++KMRVY+NLT+ EK+Y ETMC +DGFVYFRNSELISGQLGKATLGNGNKDG
Sbjct: 596 LLRPYSKMRVYVNLTLTEKSYSGKG-ETMCSSDGFVYFRNSELISGQLGKATLGNGNKDG 654
Query: 2165 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 2344
LYSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P + L+ +K+ EI Y
Sbjct: 655 LYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYK 714
Query: 2345 KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 2524
KC+D I ++N+GKL +QPG DA TLEA++T LN +R + K+CM L WRNSPLIMSQ
Sbjct: 715 KCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQ 774
Query: 2525 CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 2704
CGSKGSPINISQM+ACVGQQSVGGRRAP+GF+DRSLPHFP KSK P AKGFVA+SF+ GL
Sbjct: 775 CGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGL 834
Query: 2705 TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 2884
+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL++ YD TVRNASA I+QF+Y
Sbjct: 835 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMY 894
Query: 2885 GDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPE 3064
GDD MDP++MEEK G+PLNF R+ MKVKATCP G E SLS SEIC+ +ERLS HDMTPE
Sbjct: 895 GDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPE 954
Query: 3065 GGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 3244
GGCSEAFR SLS FL + +L+N ++L + ++ G+DR LEK NISGIT +QL
Sbjct: 955 GGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQL 1014
Query: 3245 EVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIK 3424
+VFL CISRYH K+ EPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1015 QVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1074
Query: 3425 EIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVIT 3604
EII+A K I+TPIITAKL N AR++KARIEKTLL QVAKS+KIV+++RLASI I+
Sbjct: 1075 EIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAIS 1134
Query: 3605 LDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHT 3784
LD+ IQ +L +DAY VKQSILQT K+KLKE +KVLN +KLEV PQA+K KLHFELH
Sbjct: 1135 LDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHR 1194
Query: 3785 IKNKLPMVVVSGIDTVERVIINKE---DKEKEM--PKYNLFVEGMGLLGVMGTEGVNGCE 3949
+KNKLP VVV GI TV+R ++NKE D++ ++ Y L VEG GLL VMG EGV+G
Sbjct: 1195 LKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRY 1254
Query: 3950 TKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITR 4129
TKSNHIMEV TLGIEAAR +IIDEI TMSSHGMTID+RHMMLLADLMT KGEVLGITR
Sbjct: 1255 TKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITR 1314
Query: 4130 TGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQR 4309
GVQKMKDSVLMLASFEKT DHLF+A+VNGR+DKIEGV+ECIIMGIPM +GTGM K+RQR
Sbjct: 1315 HGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQR 1374
Query: 4310 MQQQEVKLNYALDPII 4357
+ + V+LNY DP++
Sbjct: 1375 V--EHVELNYQPDPMM 1388
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 1939 bits (5023), Expect = 0.0
Identities = 987/1388 (71%), Positives = 1137/1388 (81%), Gaps = 1/1388 (0%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
QFTK+PYIEDVGPR+IESI F+ ESEI KAAEV+V+RGVYYD ++KPIE+GLLDP MG
Sbjct: 6 QFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMG 65
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K G C TC G F CPGH GYLTL LPVY+ GYL+ I+DILKCICK CS +LL EK
Sbjct: 66 PANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKA 125
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 739
+L++MR+ K E L K +L KK+V+KC + AS +KA CSRCG++NG+VKK +LG
Sbjct: 126 SKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVSVLG 184
Query: 740 IVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLS 919
I+H+RSK+ D S E +SA+SHT+E AS +V D +NP V SL K + DEDC+LL L+
Sbjct: 185 IIHDRSKIADGSLEECSSAISHTKESKAS-FSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243
Query: 920 DRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 1099
+RPEKL+ DGGTQSNEND+TERLKRIIQANASLHQE+ DT +
Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303
Query: 1100 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1279
K L W LQ+EVAQYINSDVRG+P + QAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 363
Query: 1280 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1459
GRTVISPDPNLKITEVA+PIL+A+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK I+ P
Sbjct: 364 GRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYP 423
Query: 1460 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1639
SL+ + RKR+ADELK+G IV+RHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 424 DGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 483
Query: 1640 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1819
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 484 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 543
Query: 1820 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1999
LTSSFLITRKDTFYDRA+FSL+CSYMGDGMD +DLPTPA++KPVELWTGKQLFNVLLRPH
Sbjct: 544 LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPH 603
Query: 2000 AKMRVYLNLTVAEKNYGK-PARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSV 2176
A +RVYLNLTV EK Y K +ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL+SV
Sbjct: 604 ANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSV 663
Query: 2177 LLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDD 2356
LLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP L +K K I GY C +
Sbjct: 664 LLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHE 723
Query: 2357 FIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSK 2536
I++YNKGKL+LQPG +A TLEA+IT VLN IR TA VCM L WRNSPLIMSQCGSK
Sbjct: 724 LIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSK 783
Query: 2537 GSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATE 2716
GSPINISQM+ACVGQQSVGGRRAP+GF+DR+LPHFP+KSK P AKGFVA+SFY+GLTATE
Sbjct: 784 GSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATE 843
Query: 2717 FFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDC 2896
FFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDLSIQYD TVRNA+ SI+QF+YGDD
Sbjct: 844 FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDG 903
Query: 2897 MDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGGCS 3076
MDPA+ME K G PLNF+R+ +KVKATCPAG+ SLS +I ++T +RL EH+ + E GCS
Sbjct: 904 MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GCS 961
Query: 3077 EAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLEVFL 3256
+AF+ +LS FL E+C +NT + L + G+ G E+ EKF NISGITS+QL+VFL
Sbjct: 962 DAFKTNLSGFL-EECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFL 1020
Query: 3257 RVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIID 3436
CISRY K+ EPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+
Sbjct: 1021 DTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN 1080
Query: 3437 AKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIG 3616
K ISTPIITA LE N K AR+VK RIE+T L QVAKSIKIV+++RLA I + LD+
Sbjct: 1081 GAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDME 1140
Query: 3617 MIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNK 3796
IQA +L +D+ V++SIL+ +++KLK+QH+KVL+ KLEV PQ D+S +HFELH +KN
Sbjct: 1141 GIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNL 1200
Query: 3797 LPMVVVSGIDTVERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEV 3976
LP VVV GI+TVER +INK++K KYNL VEG GL VMGTEGV G ET SNHI+EV
Sbjct: 1201 LPTVVVKGIETVERAVINKDNK----VKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEV 1256
Query: 3977 LRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDS 4156
+TLGIEAAR II+EIQ TM+SHGM+IDIRHMMLLADLMT +GEVLGITR G+QKM S
Sbjct: 1257 QQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKS 1316
Query: 4157 VLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLN 4336
VLMLASFEKTADHLF+A+V+GR+DKIEGVSECIIMGIPMQ+GTG+LKVRQR+QQ +L+
Sbjct: 1317 VLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVP-ELS 1375
Query: 4337 YALDPIIS 4360
Y LDPIIS
Sbjct: 1376 YGLDPIIS 1383
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 1862 bits (4824), Expect = 0.0
Identities = 959/1404 (68%), Positives = 1105/1404 (78%), Gaps = 17/1404 (1%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
+FTK+PYIEDVGPR+I+SI FS L +SEI KAAEV+VY+ +YYDP +PIE GLLDP MG
Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K G C TCHG F+ CPGHYGYL+L LPVY+ GYL+ ILDILKCICK CS ++L EK
Sbjct: 64 PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 739
+L++MR+PK + L K + K +V+KC+ + +S KA C RCG+VNG VKK MLG
Sbjct: 124 CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASS--KAVKCWRCGYVNGTVKKAVAMLG 181
Query: 740 IVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLS 919
I+H+RSK+ND+S E+ SA+SHT+E AS +NP V SL K + D DCELLYLS
Sbjct: 182 IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241
Query: 920 DRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 1099
DRPEKL+ DG +QSNENDITERLKRIIQANASL QE+ +T+
Sbjct: 242 DRPEKLIITNIAVPPIPIRPSVIMDG-SQSNENDITERLKRIIQANASLRQELVETNAAF 300
Query: 1100 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1279
K L W LQVEVAQYINSDVRG+PFS Q ++PLSGFVQR+KGK GRFRGNLSGKRVEYT
Sbjct: 301 KCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYT 360
Query: 1280 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1459
GRTVISPDPNLKITEVA+PI +ARILTYPERVS+HNIEKLRQCVRNGP+KYPGA+ ++ P
Sbjct: 361 GRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYP 420
Query: 1460 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1639
LI RKR ADELKFG +VDRHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 421 DGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 480
Query: 1640 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1819
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 540
Query: 1820 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1999
LTSSFLITRKD FYDRA+FSLICSYMGDGMD IDLPTPAL+KP+ELWTGKQLF+VLLRPH
Sbjct: 541 LTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPH 600
Query: 2000 AKMRVYLNLTVAEKNYGKP----------ARETMCPNDGFVYFRNSELISGQLGKATLGN 2149
A +RVYLNL V E+NY K ETMCP+DGFVY RNSELI GQLGKATLGN
Sbjct: 601 ASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGN 660
Query: 2150 GNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEI 2329
GNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP +L EK I
Sbjct: 661 GNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTI 720
Query: 2330 RSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSP 2509
Y KCD+ I+ +N+GKL+ +PG+DA TLEA +T +LNNIR +T KVCM L WRNSP
Sbjct: 721 SGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSP 780
Query: 2510 LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANS 2689
LIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGF+DRSLPHF + SK P AKGFVANS
Sbjct: 781 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANS 840
Query: 2690 FYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASI 2869
FYSGLTATEFFFHTMAGREGLVDTAVKTA+TGYMSRRL+KALEDLSI YD TVRNAS I
Sbjct: 841 FYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCI 900
Query: 2870 IQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEH 3049
+QF+YGDD MDPA ME K+G PLNFDR+LMKVKATCP ++ L I Q +E+L++H
Sbjct: 901 VQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKH 960
Query: 3050 DMTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGI 3229
D P G CSEAF+ SL FLK + L M+ + K LEK ISGI
Sbjct: 961 D--PAGVCSEAFKKSLKGFLKSQ-TNELDRVMKLVNNCAQKS-----EILEKVGHKISGI 1012
Query: 3230 TSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLG 3409
+ RQLEVF+ CISRY +K EPGTQMTLKTFHFAGVASMN+T G
Sbjct: 1013 SDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQG 1072
Query: 3410 VPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLA 3589
VPRIKEII+A K ISTP+ITA+LE + NP A+IVK RIEKT+L QVAKSIKIV+++R A
Sbjct: 1073 VPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSA 1132
Query: 3590 SIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLH 3769
S+VITLD+ +I L++DA VK+SILQT K+KLKEQHVKVL+ +KLEVVP AD+S++H
Sbjct: 1133 SVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIH 1192
Query: 3770 FELHTIKNKLPMVVVSGIDTVERVIINKEDKEKEMPK-------YNLFVEGMGLLGVMGT 3928
FELH++KN LP+VVV GI TVER ++ ++KEK+ K + L VEG GL VMG
Sbjct: 1193 FELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGI 1252
Query: 3929 EGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKG 4108
EG++G T SNH+ME+ + LGIEAAR IIDEI TM HGMTID RHMMLLAD+MT +G
Sbjct: 1253 EGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRG 1312
Query: 4109 EVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTG 4288
EVLGITR G+QKM S+LMLASFE+TADHLF+AAVNGR+DKIEGV+ECIIMGIPMQ+GTG
Sbjct: 1313 EVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTG 1372
Query: 4289 MLKVRQRMQQQEVKLNYALDPIIS 4360
+LKV QR+ + L Y DP++S
Sbjct: 1373 ILKVIQRVDPPPM-LRYGPDPVLS 1395
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 1848 bits (4786), Expect = 0.0
Identities = 952/1403 (67%), Positives = 1096/1403 (78%), Gaps = 17/1403 (1%)
Frame = +2
Query: 203 FTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGP 382
FTKQPYIEDVGPR+IESI FS + +SEI+KAAEV+VY+G YY ++ PIE GLLDP MGP
Sbjct: 14 FTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPRMGP 73
Query: 383 TLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDR 562
K C TCHG FS CPGHYGYLTL LPVY+ GYL+ ILDILKCICK CS LLL EK
Sbjct: 74 ANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEEKLC 133
Query: 563 LAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGI 742
+L++MRNPK E L KT L K +V+KC+ + + KA C RCG++NGMVKK +LGI
Sbjct: 134 KDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYINGMVKKAVAVLGI 190
Query: 743 VHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLSD 922
+H+RSKV +S E+ SA++HT+E A+ +NP V L K + D DCE+LYLS+
Sbjct: 191 IHDRSKVTESLQ-EFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSE 249
Query: 923 RPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSLPTK 1102
RPEKL+ DG +QSNENDITERLKRIIQ NASL QE+ + + K
Sbjct: 250 RPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTNASLQQELVEANSAFK 308
Query: 1103 SLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 1282
SL W LQVEVAQYINSDVRG+PFS Q ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG
Sbjct: 309 SLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 368
Query: 1283 RTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQPG 1462
RTVISPDPNLKITEVA+PI +ARILTYPERVS HNIEKLRQC++NGP+KYPGA+ I+ P
Sbjct: 369 RTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPD 428
Query: 1463 ADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRTL 1642
L R + A ELK G IVDRHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRTL
Sbjct: 429 GTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 488
Query: 1643 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL 1822
RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL
Sbjct: 489 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL 548
Query: 1823 TSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPHA 2002
TSSFLITRKDTFYDRA+FSL+C YMGDGMD +DLPTPA++KPVELWTGKQLF+VL+RPHA
Sbjct: 549 TSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHA 608
Query: 2003 KMRVYLNLTVAEKNYGKP----------ARETMCPNDGFVYFRNSELISGQLGKATLGNG 2152
MRVY+NLTV EK Y ETMCPNDGFVYFRNSELISGQLGKATLGNG
Sbjct: 609 NMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNG 668
Query: 2153 NKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIR 2332
NKDGLYSVLLRDYG+HA + CMNRLAKLSARWIGNHGFSIGIDDVQP +L +K K I
Sbjct: 669 NKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLIS 728
Query: 2333 SGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPL 2512
Y C+ I+EYN+GKL+L+PG DA TLEA IT +LN IR + K CMG+L WRNSPL
Sbjct: 729 ENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPL 788
Query: 2513 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSF 2692
IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP+K+K P AKGFVANSF
Sbjct: 789 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSF 848
Query: 2693 YSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASII 2872
YSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSIQYD +VRNA I+
Sbjct: 849 YSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIV 908
Query: 2873 QFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHD 3052
QF+YGDD MDPA ME K+G+PLNFDR+LMKVKATCP + LSP ++ + +++L+ +
Sbjct: 909 QFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYG 968
Query: 3053 MTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGIT 3232
+ CSEAF +SL KF + + ++ D + + LE+ SGIT
Sbjct: 969 ---KESCSEAFLNSLRKFFE----GQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGIT 1021
Query: 3233 SRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3412
+QLEVF++ C SRYH K+ EPGTQMTLKTFHFAGVASMN+T GV
Sbjct: 1022 EKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGV 1081
Query: 3413 PRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLAS 3592
PRIKEII+ K ISTPIITA+LE N AR+VK RIEKTLL QVAKSIKIVM++RLAS
Sbjct: 1082 PRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLAS 1141
Query: 3593 IVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHF 3772
IVI LD+ IQ L ++A VK+SI+QT K+KLK+QH+KVL+ +KLE+ P DKSK+HF
Sbjct: 1142 IVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHF 1201
Query: 3773 ELHTIKNKLPMVVVSGIDTVERVIINKEDKEK-------EMPKYNLFVEGMGLLGVMGTE 3931
EL+++KN LPMV+V GI TVERV+I +++KEK E KY L VEG GL VMG E
Sbjct: 1202 ELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAE 1261
Query: 3932 GVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGE 4111
G++GC+TKSNHI EV +TLGIEAAR IIDEI TM +HGM+ID RHMMLLADLMT +GE
Sbjct: 1262 GIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGE 1321
Query: 4112 VLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGM 4291
VLGITR G+QKM SVLMLASFEKTADHLF+A+VNGR+D+IEGVSECIIMGIPM +GTG+
Sbjct: 1322 VLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGI 1381
Query: 4292 LKVRQRMQQQEVKLNYALDPIIS 4360
LK+RQR + A DPI+S
Sbjct: 1382 LKIRQRDAVPPMLKYGAPDPIMS 1404
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 1808 bits (4682), Expect = 0.0
Identities = 938/1412 (66%), Positives = 1086/1412 (76%), Gaps = 16/1412 (1%)
Frame = +2
Query: 173 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 352
M R FTKQPYIEDVGPR+I+S+ F+T +EI K AEV+VY+G+YYD ++KPI+
Sbjct: 1 MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 60
Query: 353 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 532
GLLDP MGP KG C TCH F CPGHYGY+ L LPV++ GY T IL+ILKCICK C
Sbjct: 61 GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 120
Query: 533 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGM 712
S +LL EK FL++MRNPK E L K L KK+++KC+ L +G K+T CSRCG++NG
Sbjct: 121 SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLT-TGNKSTRCSRCGYLNGS 179
Query: 713 VKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKD 892
VKK MLGI+H R++ D+ + YN S D +NP V L + + D
Sbjct: 180 VKKAVSMLGILHYRARSKDAG----VVSEDLRAPYNVSN----DILNPFRVLCLFQRMSD 231
Query: 893 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQ 1072
EDCELL+LS+RPEKL+ DG +QSNENDITERLKRIIQ NAS+ Q
Sbjct: 232 EDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDG-SQSNENDITERLKRIIQQNASVSQ 290
Query: 1073 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGN 1252
E+S ++ K L +W LQ EVAQ INSDVRGIPFS Q ++PL+GFVQRLKGKQGRFRGN
Sbjct: 291 ELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGN 350
Query: 1253 LSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKY 1432
L GKRVE+TGRTVISPDPNLKITEVAVPI +ARILTYPERV+ HNIEKLRQCV NGP+KY
Sbjct: 351 LCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKY 410
Query: 1433 PGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCH 1612
PGA+ ++ SL+ + RKR ADELK+G+IV+RHLEDGD +LFNRQPSLHRMSIMCH
Sbjct: 411 PGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCH 470
Query: 1613 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE 1792
R R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+LLMGVQNNLCTPKNGE
Sbjct: 471 RVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGE 530
Query: 1793 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQ 1972
ILVASTQDFLTSSFLITRKDTFYDRA+FSL+CSYMGDGMD +DLPTPALVKP+ELWTGKQ
Sbjct: 531 ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQ 590
Query: 1973 LFNVLLRPHAKMRVYLNLTVAEKNYGK-----PARETMCPNDGFVYFRNSELISGQLGKA 2137
LF+VL+RPHA M+VYLNLTV EK+Y K RETMCPNDGFVYFRNSELISGQ+GKA
Sbjct: 591 LFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKA 650
Query: 2138 TLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEK 2317
TLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP D+L+ +K
Sbjct: 651 TLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKK 710
Query: 2318 EKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQW 2497
+ I GY CD I +N G L + G DA +LE+KITQ+LN IR TA VCM NL W
Sbjct: 711 QTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHW 770
Query: 2498 RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGF 2677
RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GF+DRSLPHF +K+K P AKGF
Sbjct: 771 RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGF 830
Query: 2678 VANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNA 2857
VANSFYSGLTATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSI YD +VRNA
Sbjct: 831 VANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNA 890
Query: 2858 SASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDER 3037
I+QF YGDD MDPAQME K+G PLNF+R+ +K KATCP+ LSPSE + ++R
Sbjct: 891 GGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDR 950
Query: 3038 LSEHDMTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQ------GGEDRRSL 3199
LS+ D +PE GCS AF SL FL K V + + + L D + D ++
Sbjct: 951 LSKDDASPECGCSPAFVGSLKIFL-NKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNI 1009
Query: 3200 ---EKFYPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTF 3370
K NI+G+T RQL+VFL C+SRYH KK EPGTQMTLKTF
Sbjct: 1010 VIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTF 1069
Query: 3371 HFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQV 3550
HFAGVASMNVTLGVPRIKEII+ K ISTPI+TA L + N AR+VKARIEKT L Q+
Sbjct: 1070 HFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQI 1129
Query: 3551 AKSIKIVMSARLASIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQK 3730
AK I+IVMS+R A I I LD+ I+ L+VDA VKQ+IL T KLKLK +H+ VL+ +K
Sbjct: 1130 AKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRK 1189
Query: 3731 LEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDTVERVIINKE-DKEKEMPKYNLFVEGM 3904
L V+PQ AD++KLHF LH +KN LP VVV GI TV R +I +E DK + K++L VEG
Sbjct: 1190 LRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGT 1249
Query: 3905 GLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLL 4084
GL VMGTEGV+GC TKSNHI+EV + LGIEAAR II+EI+ TM SHGM+IDIRHMMLL
Sbjct: 1250 GLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLL 1309
Query: 4085 ADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMG 4264
DLMT +GEVLGITR G+QKM SVLMLASFEKTADHLF+A+VNGR+DKIEGVSEC+IMG
Sbjct: 1310 GDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMG 1369
Query: 4265 IPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 4360
IPM +GTGMLKVRQR+ + +L Y I+S
Sbjct: 1370 IPMPLGTGMLKVRQRVSVPQ-QLPYGPPAILS 1400
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 1787 bits (4629), Expect = 0.0
Identities = 934/1418 (65%), Positives = 1076/1418 (75%), Gaps = 32/1418 (2%)
Frame = +2
Query: 203 FTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHM-- 376
FTKQPYIEDVGPR+IESI FS + +SEI+KAAEV+VY+G YY ++ PIE GLLDP M
Sbjct: 14 FTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPRMEK 73
Query: 377 -------------GPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKC 517
GP K C TCHG FS CPGHYGYLTL LPVY+ GYL+ ILDILKC
Sbjct: 74 IIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKC 133
Query: 518 ICKQCSSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCG 697
ICK CS LLL EK +L++MRNPK E L KT L K +V+KC+ + + KA C RCG
Sbjct: 134 ICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCG 190
Query: 698 FVNGMVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLL 877
++NGMVKK +LGI+H+RSKV +S E+ SA++HT+E A+ +NP V L
Sbjct: 191 YINGMVKKAVAVLGIIHDRSKVTESLQ-EFASAITHTKESKAAVNVATYILNPVNVLFLF 249
Query: 878 KNVKDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQAN 1057
K + D DCE+LYLS+RPEKL+ DG +QSNENDITERLKRIIQ N
Sbjct: 250 KRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTN 308
Query: 1058 ASLHQEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQG 1237
ASL QE+ + + KSL W LQVEVAQYINSDVRG+PFS Q ARPLSGFVQRLKGKQG
Sbjct: 309 ASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQG 368
Query: 1238 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRN 1417
RFRGNLSGKRVEYTGRTVISPDPNLKITEVA+PI +ARILTYPERVS HNIEKLRQC++N
Sbjct: 369 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQN 428
Query: 1418 GPNKYPGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRM 1597
GP+KYPGA+ I+ P L R + A ELK G IVDRHLEDGD +LFNRQPSLHRM
Sbjct: 429 GPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRM 488
Query: 1598 SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT 1777
SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT
Sbjct: 489 SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT 548
Query: 1778 PKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVEL 1957
PKNGEILVASTQDFLTSSFLITRKDTFYDRA+FSL+C YMGDGMD +DLPTPA++KPVEL
Sbjct: 549 PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVEL 608
Query: 1958 WTGKQLFNVLLRPHAKMRVYLNLTVAEKNYGKP----------ARETMCPNDGFVYFRNS 2107
WTGKQLF+VL+RPHA MRVY+NLTV EK Y ETMCPNDGFVYFRNS
Sbjct: 609 WTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNS 668
Query: 2108 ELISGQLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDV 2287
ELISGQLGKATLG CMNRLAKLSARWIGNHGFSIGIDDV
Sbjct: 669 ELISGQLGKATLG----------------------CMNRLAKLSARWIGNHGFSIGIDDV 706
Query: 2288 QPPDKLIIEKEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGET 2467
QP +L +K K I Y C+ I+EYN+GKL+L+PG DA TLEA IT +LN IR +
Sbjct: 707 QPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDA 766
Query: 2468 AKVCMGNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPK 2647
K CMG+L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP+
Sbjct: 767 GKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPR 826
Query: 2648 KSKIPQAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLS 2827
K+K P AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLS
Sbjct: 827 KAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLS 886
Query: 2828 IQYDYTVRNASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSP 3007
IQYD +VRNA I+QF+YGDD MDPA ME K+G+PLNFDR+LMKVKATCP + LSP
Sbjct: 887 IQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSP 946
Query: 3008 SEICQKTDERLSEHDMTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGED 3187
++ + +++L+ + + CSEAF +SL KF + + ++ D +
Sbjct: 947 QQVSEIVEKQLAAYG---KESCSEAFLNSLRKFFE----GQQDKLDKKIKFVEDIGWDDK 999
Query: 3188 RRSLEKFYPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKT 3367
+ LE+ SGIT +QLEVF++ C SRYH K+ EPGTQMTLKT
Sbjct: 1000 SQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKT 1059
Query: 3368 FHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQ 3547
FHFAGVASMN+T GVPRIKEII+ K ISTPIITA+LE N AR+VK RIEKTLL Q
Sbjct: 1060 FHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQ 1119
Query: 3548 VAKSIKIVMSARLASIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQ 3727
VAKSIKIVM++RLASIVI LD+ IQ L ++A VK+SI+QT K+KLK+QH+KVL+ +
Sbjct: 1120 VAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFR 1179
Query: 3728 KLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTVERVIINKEDKEK-------EMPKYN 3886
KLE+ P DKSK+HFEL+++KN LPMV+V GI TVERV+I +++KEK E KY
Sbjct: 1180 KLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYR 1239
Query: 3887 LFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDI 4066
L VEG GL VMG EG++GC+TKSNHI EV +TLGIEAAR IIDEI TM +HGM+ID
Sbjct: 1240 LLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDK 1299
Query: 4067 RHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVS 4246
RHMMLLADLMT +GEVLGITR G+QKM SVLMLASFEKTADHLF+A+VNGR+D+IEGVS
Sbjct: 1300 RHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVS 1359
Query: 4247 ECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 4360
ECIIMGIPM +GTG+LK+RQR + A DPI+S
Sbjct: 1360 ECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1397
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 1760 bits (4559), Expect = 0.0
Identities = 890/1243 (71%), Positives = 1016/1243 (81%), Gaps = 5/1243 (0%)
Frame = +2
Query: 188 QATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLD 367
Q + Q TKQPYIEDVGPR+I+SI FS ESEILK+AEVEVY G+YY+ +KKPI++GLLD
Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64
Query: 368 PHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLL 547
P MGP K G CETCHG F +CPGHYGYL L LPVY+ GYL ++DILKCICK CSS+LL
Sbjct: 65 PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124
Query: 548 GEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNT 727
+K+R L++MRNP+ E L K++L KKVV++CN + A G+K CS+CG++NGMVKK
Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAM-AGGQKTATCSKCGYMNGMVKK-- 181
Query: 728 KMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCEL 907
L I HE+ + +E A+S +E AS V+VP E++PKVVYSL KN+ DEDCEL
Sbjct: 182 LQLKITHEQG---NRILDEINVAISDKRELRAS-VSVPPELDPKVVYSLFKNMSDEDCEL 237
Query: 908 LYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDT 1087
LYLSDRPEKL+ DGGTQSNENDITERLKRIIQANASLHQE+SD+
Sbjct: 238 LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS 297
Query: 1088 SLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKR 1267
S P KSLN WIDLQ+EVAQYINSDVRG+P QA RPLSGF QRLKGKQGRFRGNLSGKR
Sbjct: 298 S-PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKR 356
Query: 1268 VEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKF 1447
VEYTGRTVISPDPNLKITEVA+PIL+A+ILTYPERVS HNIEKLRQCVRNGPNKYPGAKF
Sbjct: 357 VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKF 416
Query: 1448 IKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIM 1627
I+ P ISL+ +RKR+ADELKFG IVDRHLEDGD +LFNRQPSLHRMSIM HRARIM
Sbjct: 417 IRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 476
Query: 1628 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS 1807
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+GEILVAS
Sbjct: 477 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVAS 536
Query: 1808 TQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVL 1987
TQDFLTSSFLITRKDTFY+RASFSLICSYMGD MDP DLP+PA +KPVELWTGKQLF++L
Sbjct: 537 TQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHML 596
Query: 1988 LRPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGL 2167
LRP++KMRVY+NLTV EK+Y ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL
Sbjct: 597 LRPYSKMRVYVNLTVTEKSYSGKG-ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655
Query: 2168 YSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGK 2347
YSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P + L+ +K+ EI Y K
Sbjct: 656 YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715
Query: 2348 CDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQC 2527
C+D I ++N+GKL +QPG DA TLEA++T LN +R + K+CM L WRNSPLIMSQC
Sbjct: 716 CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775
Query: 2528 GSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLT 2707
GSKGSPINISQM+ACVGQQSVGGRRAP+GF+DRSLPHFP KSK P AKGFVA+SF+ GL+
Sbjct: 776 GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835
Query: 2708 ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYG 2887
ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL++ YD TVRNASA I+QF+YG
Sbjct: 836 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895
Query: 2888 DDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEG 3067
DD MDP+QMEEK G+PLNF R+ MKVKATCP G E SLS SEIC+ +ERLS HDMTPEG
Sbjct: 896 DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955
Query: 3068 GCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLE 3247
GCSEAFR SLS FL + +L+N ++L + ++ G+DR LEK NISGIT RQL+
Sbjct: 956 GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015
Query: 3248 VFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 3427
VFL CISRYH K+ EPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1016 VFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1075
Query: 3428 IIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITL 3607
II+A K I+TPIIT KL N AR++KARIEKTLL QVAKS+KIV+++RLASI I+L
Sbjct: 1076 IINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISL 1135
Query: 3608 DIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTI 3787
D+ IQ +L +DAY VKQSILQT K+KLKE +KVLN +KLEV PQA+K KLHFELH +
Sbjct: 1136 DMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRL 1195
Query: 3788 KNKLPMVVVSGIDTVERVIINKE---DKEKEM--PKYNLFVEG 3901
KNKLP VVV GI TV+R ++NKE D++ ++ Y L VEG
Sbjct: 1196 KNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEG 1238
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 1752 bits (4538), Expect = 0.0
Identities = 906/1389 (65%), Positives = 1068/1389 (76%), Gaps = 20/1389 (1%)
Frame = +2
Query: 203 FTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGP 382
+TKQPYIEDVGPRRI+SI FST+ S+ILKA+E +V+ G YYD +KK I GLLD MG
Sbjct: 10 YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69
Query: 383 TLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDR 562
K G C+TC G+F+ CPGH+GYL L LPVY+ GYL+ ILDILKCICK CS +L+ EK R
Sbjct: 70 PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129
Query: 563 LAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGI 742
++L++MRNP+ EPL K +L K++V+KC+ + +S KA C RCG++NGMVKK ++GI
Sbjct: 130 KSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASS--KAVKCLRCGYMNGMVKKAGSVVGI 187
Query: 743 VHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLSD 922
+H+RSK+ D E SA+ HT+E A +NP V SL + + +EDCELLYL
Sbjct: 188 IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247
Query: 923 RPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISD-TSLPT 1099
RPEKL+ +G +QSNENDITERLK+IIQ NA L E+ +
Sbjct: 248 RPEKLIITTIAVPPISIRPSVFTEG-SQSNENDITERLKQIIQFNAKLRLELLEGRRTGI 306
Query: 1100 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1279
K L W +LQ V YINSDVR IP Q RPLSGFVQRL GKQGRFR NL+GKRVE+T
Sbjct: 307 KYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFT 365
Query: 1280 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1459
GRTVISPDPNLKITEVA+PI +ARILTYPERV+HHNIEKLRQCV NG KYPGA+ + P
Sbjct: 366 GRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYP 425
Query: 1460 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1639
L RKR A+ELK G IV RHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 426 DGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 485
Query: 1640 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1819
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA LLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 486 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQDF 545
Query: 1820 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1999
LTSSFLITRKDTFYDRA+FSL+CSYM DGMD +DLPTP+++KP+ELWTGKQLF+VLLRPH
Sbjct: 546 LTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRPH 605
Query: 2000 AKMRVYLNLTVAEKNYGKP------ARETMCPNDGFVYFRNSELISGQLGKATLGNGNKD 2161
A +RVY+NL + EKNY +P RETMCPNDG+VYFRNSELISGQLGKATLGNGNKD
Sbjct: 606 ANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNKD 665
Query: 2162 GLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGY 2341
GLYS+LLRDY ++AAATCMNRLAKLSARWIGNHGFSIGIDDVQP KLI EK K I +GY
Sbjct: 666 GLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNGY 725
Query: 2342 GKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMS 2521
C+ I +YN G+L L+ G DA TLE +IT+ LN +R E VCM L WRNSPLIMS
Sbjct: 726 RHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIMS 785
Query: 2522 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSG 2701
QCGSKGSPINISQM+ACVGQQSVGG RAP+GF+DRSLPHFP+KSK P AKGFVANSFYSG
Sbjct: 786 QCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSG 845
Query: 2702 LTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFV 2881
L+ATEFFFHTM GREGLVDTAVKTADTGYM+RRL K LEDL +QYD TV++A I+QF+
Sbjct: 846 LSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFL 905
Query: 2882 YGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTP 3061
YGDD +DPA ME K G PLNFDR+ MKVKATC A ++ LSPS+I L +H+ T
Sbjct: 906 YGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLKHNGTL 965
Query: 3062 EGGCSEAFRDSLSKFLKE-----KCVASLRN--TMQNLEMDGDKQGGED-RRSLEKFYPN 3217
+G CSE+FR SLS FL + +C+ L + ++N E + +G ++ EK
Sbjct: 966 DGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISKNTEKIAQK 1025
Query: 3218 ISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMN 3397
+SGIT +QLEVFL+ C+ RY K+ EPGTQMTLKTFHFAGVASMN
Sbjct: 1026 VSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1085
Query: 3398 VTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMS 3577
+T GVPRIKEII+ K ISTPIIT +LE N ARI+K RI+KT+L QVAKSIKIVM+
Sbjct: 1086 ITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMT 1145
Query: 3578 ARLASIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADK 3757
+R AS+ +TLD+ I+ +L +DA V++ IL+T K+K K Q + VL KLEV P D+
Sbjct: 1146 SRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVFPGGDR 1205
Query: 3758 SKLHFELHTIKNKLPMVVVSGIDTVERVIINK---EDKEKEM--PKYNLFVEGMGLLGVM 3922
+KLHFELH++KN LP VVV GI TVERV+I + +D E + PKYN+FVEGMGL VM
Sbjct: 1206 NKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVEGMGLQAVM 1265
Query: 3923 GTEGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTS 4102
GTEGV+G +TKSNHI+EV TLGIEAAR IIDEI+ TM SHGM+IDIRHMMLLAD+MTS
Sbjct: 1266 GTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTS 1325
Query: 4103 KGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMG 4282
+G VLGITR G+QKM SVLMLASFEKT+DHLF+A+V G++DKIEGVSECIIMGIP+ +G
Sbjct: 1326 RGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIG 1385
Query: 4283 TGMLKVRQR 4309
TG+LK++QR
Sbjct: 1386 TGVLKIQQR 1394
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 1749 bits (4530), Expect = 0.0
Identities = 902/1377 (65%), Positives = 1061/1377 (77%), Gaps = 8/1377 (0%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
Q TKQPYIEDVG RRIESI FSTL SE+LK A VEVY+G YYD +KKP+ +GLLD MG
Sbjct: 2 QSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRMG 61
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K VC TCHG F +CPGHYGYL L LPVY+ GYL+NI+DILKCICK CS +LL EK+
Sbjct: 62 PPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEKE 121
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 739
FL++MRNP+ EPL KT L KK+V++CN S + A C RCG +NGMVK+
Sbjct: 122 HHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAK-CPRCGHINGMVKRAPYK-- 178
Query: 740 IVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLS 919
++++R +V DS E SA AS ++ V+ LL+N+ DEDCELLY+
Sbjct: 179 VMYDRGRVIDSQMEECQSA---GPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIH 235
Query: 920 DRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 1099
DRPEKLM DGGTQSNENDITERLK II+ANA+L Q++ +T++
Sbjct: 236 DRPEKLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYK 295
Query: 1100 KSLNAWIDLQVEVAQYINSDVRGIP-FSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 1276
K + +W LQ+EVAQYINSD RG+P + +++PLSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 296 KGVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEY 355
Query: 1277 TGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQ 1456
TGRTVISPDPNLKITEVAVPIL+A+ILTYPERVSH NI +LR+CVR GPN+YPGAKFI+Q
Sbjct: 356 TGRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQ 415
Query: 1457 PGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWR 1636
P ISL ++RK +AD LK+GDIVDRHL+DGD +LFNRQPSLHRMSIMCHRARIMPWR
Sbjct: 416 PDGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWR 475
Query: 1637 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQD 1816
TLRFNESVCNPYNADFDGDEMNMHVPQTEE+R EA++LMGVQNNLCTPKNGE+LVASTQD
Sbjct: 476 TLRFNESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQD 535
Query: 1817 FLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRP 1996
FLTSSFLITRKDTFYDR++FSLIC+++ DG+ +DLP PA+VKPVELWTGKQ+F+VLLRP
Sbjct: 536 FLTSSFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRP 595
Query: 1997 HAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSV 2176
+V++NLTVAEK Y K + ETMCP DGFV RNSELISGQLGKATLGNG+KDGLYS+
Sbjct: 596 DKDRKVFVNLTVAEKIYVK-SGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSI 654
Query: 2177 LLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDD 2356
LLRDYG+HAAA CMNRLAKLSARWIGNHGFSIGI+DVQP D L EK+ I YG+C
Sbjct: 655 LLRDYGAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIR 714
Query: 2357 FIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSK 2536
+IE Y GKLEL PG + TLEAKIT LN IR TA+VCM NL WRNSPLIMSQCGSK
Sbjct: 715 YIESYKSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSK 774
Query: 2537 GSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATE 2716
GSPINI QMVACVGQQSVGGRRAPNGF+DR+LPHF + +K P AKGFV NSFY+GL TE
Sbjct: 775 GSPINICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTE 834
Query: 2717 FFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDC 2896
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLS+QYD TVRNAS I+QF YGDD
Sbjct: 835 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDG 894
Query: 2897 MDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSE----ICQKTDERLSEHDMTPE 3064
+DPAQMEEKTG PLNF+R+ MK KATCP+ + SL + I + +E S D++
Sbjct: 895 LDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIEENHSRSDISEM 954
Query: 3065 GGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 3244
CSE F SL +FL ++ + M + +++ + +D+ ++ + SGIT +QL
Sbjct: 955 EKCSETFEASLLRFLNKRVYPT---GMLSEKLNSENISLQDKSYVQSVVSSTSGITQQQL 1011
Query: 3245 EVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIK 3424
EVFL +C +RYH KK EPGTQMTLKTFHFAGVASMNVTLGVPRI+
Sbjct: 1012 EVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIR 1071
Query: 3425 EIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVIT 3604
EIIDA K I TP+IT +L+R+ ARIVK RIEKTLL ++AKS+K+ R ASIVI
Sbjct: 1072 EIIDAAKKIKTPVITTELQRKDCGITARIVKGRIEKTLLGEIAKSMKVSEMTRTASIVIK 1131
Query: 3605 LDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHT 3784
LD +I+A +L +DAY VK+SIL T K+KLKEQ ++VLN QKL V +A++SKL FE
Sbjct: 1132 LDTKVIEAAQLFIDAYTVKESILLTPKMKLKEQQIRVLNRQKLTVSLEAERSKLEFESWA 1191
Query: 3785 IKNKLPMVVVSGIDTVERVIINKEDKEK---EMPKYNLFVEGMGLLGVMGTEGVNGCETK 3955
++NKL VVV GI VER II E K + K L VEG G L V+G +GV+ TK
Sbjct: 1192 LQNKLKDVVVKGIKQVERAIIVDEANGKDPNQRKKLKLVVEGTGFLSVLGIQGVDARNTK 1251
Query: 3956 SNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTG 4135
SNHIMEV + LGIE+AR IIDEIQ TMS HGMTIDIRHMMLLADLMT KGEVLGITR G
Sbjct: 1252 SNHIMEVFQVLGIESARRQIIDEIQYTMSGHGMTIDIRHMMLLADLMTFKGEVLGITRYG 1311
Query: 4136 VQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQ 4306
V+KM+DSVLMLASFE+TADHLF+A VNGR D+IEGVSECI++GIPM+ GTGM+K++Q
Sbjct: 1312 VRKMRDSVLMLASFERTADHLFNAPVNGRVDRIEGVSECIMLGIPMRTGTGMMKIKQ 1368
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 1739 bits (4504), Expect = 0.0
Identities = 903/1415 (63%), Positives = 1074/1415 (75%), Gaps = 19/1415 (1%)
Frame = +2
Query: 173 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 352
M R FTK+P++ED GPR+I+++ FSTL ESEI K AEV+V++G YYD KKPI
Sbjct: 1 MNRARTEGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIH 60
Query: 353 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 532
GLLDP MGP K VC TC G F CPGHYGYL L LPV++ GYL+ I++ILKCICK C
Sbjct: 61 GGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGC 120
Query: 533 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQK-KVVEKCNRLVASGRKATVCSRCGFVNG 709
+ +LL E R L++MR+ K+ L K K +V++ C+++V C RCG++NG
Sbjct: 121 ARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVN-------CPRCGYING 173
Query: 710 MVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVK 889
VKK L I+H+ SK + E SA+S ++ A+ +NP V SL K +
Sbjct: 174 SVKKLPASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRML 233
Query: 890 DEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLH 1069
DEDCELLY+++RPEKL+ D SNENDITERLK IIQANA L
Sbjct: 234 DEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLR 292
Query: 1070 QEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRG 1249
QE+ +++ +K L+ W LQ EVAQ+INSDVRGIPF Q + L+GFVQRLKGK GRFRG
Sbjct: 293 QELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRG 352
Query: 1250 NLSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNK 1429
NLSGKRVEYTGRTVISPDPNLKI+EVA+PI +ARILTYPERV+HHNIEKLRQCVRNGP+K
Sbjct: 353 NLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDK 412
Query: 1430 YPGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMC 1609
YPGA+ +++ G SL RKR ADEL+ GDIVDRHLEDGD +LFNRQPSLHRMSIMC
Sbjct: 413 YPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMC 472
Query: 1610 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 1789
HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGV+NNLCTPKNG
Sbjct: 473 HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNG 532
Query: 1790 EILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGK 1969
EILVASTQDFLTSSFLITRKDTFYDR++FSLICSY+GDGMDPIDLPTPA+VKPVELW+GK
Sbjct: 533 EILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGK 592
Query: 1970 QLFNVLLRPHAKMRVYLNLTVAEKNYGKPAR--------ETMCPNDGFVYFRNSELISGQ 2125
QLF+++LRPHA MRVY+NLTV E+NY + + +T+CPNDGFVYFRNSELISGQ
Sbjct: 593 QLFSIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQ 652
Query: 2126 LGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKL 2305
+GK TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP + L
Sbjct: 653 VGKVTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEIL 712
Query: 2306 IIEKEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMG 2485
I +K++ I GY +CD IE +NKGKLEL G DA TLE +IT VLN +R KVCM
Sbjct: 713 INKKDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQ 772
Query: 2486 NLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQ 2665
L WRNSPLIMSQCGSKGS INISQMVACVGQQSVGGRR PNGF+DRSLPHFP+KSK P
Sbjct: 773 TLHWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPA 832
Query: 2666 AKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYT 2845
AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSR+LMK+LEDL + YDYT
Sbjct: 833 AKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYT 892
Query: 2846 VRNASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAG-DEISLSPSEICQ 3022
VRNA SI+QF YGDD MDPA ME K G+PLNF+R+ +K KA CP D+ LS S++ +
Sbjct: 893 VRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSK 952
Query: 3023 KTDERLSEHDMTP-------EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGG 3181
E+LSE DM+ E G S F +SL F+K+ N ++ +
Sbjct: 953 VVHEKLSEFDMSRLAEKGVFEVGFSADFVESLQSFIKD-----------NAKLTEEGFTD 1001
Query: 3182 EDRRSLEKFYPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTL 3361
E ++L+KF ISGIT +QL+VFL +C+SRYH+KK EPGTQMTL
Sbjct: 1002 EHSQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTL 1061
Query: 3362 KTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLL 3541
KTFHFAGVASMNVTLGVPR+KEI++ K ISTPIITA LER+ N ARIVK RIEKT L
Sbjct: 1062 KTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNL 1121
Query: 3542 SQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLN 3721
QVAKSIK+VM++R AS+VITLD+ IQ L++DA VK+SIL+TKK KLK +H+K+L+
Sbjct: 1122 GQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIKILD 1181
Query: 3722 TQKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDTVERVIINKEDKEKEMPKYNLFVE 3898
+KLEVVPQ D+SK+HF+LH +KN LP VVV GI TV+RV+I+K+ K + K+ L VE
Sbjct: 1182 IKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKDTKAE---KFRLLVE 1238
Query: 3899 GMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTM-SSHGMTIDIRHM 4075
G G VMG EG++G +T SNHI EV TLGIEAAR +I+ EI+ TM +HGM IDIRHM
Sbjct: 1239 GTGFREVMGVEGIDGRKTVSNHIHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIRHM 1298
Query: 4076 MLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECI 4255
MLLAD+MT+ G +LGI R G+ KM SVLMLASFE+TAD LF A+V GR+D I GVSE I
Sbjct: 1299 MLLADMMTATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESI 1358
Query: 4256 IMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 4360
IMGIP+Q+GTGM+KV+QR+ E L + PI+S
Sbjct: 1359 IMGIPIQIGTGMIKVKQRLDPPE--LPHGTSPILS 1391
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1738 bits (4500), Expect = 0.0
Identities = 907/1384 (65%), Positives = 1066/1384 (77%), Gaps = 23/1384 (1%)
Frame = +2
Query: 278 SEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGPTLK-GGVCETCHGTFSQCPGHYGYL 454
+EILKAAE +V+ G YYD ++KPI+ GLLDP +GP K CETC F +CPGH+GYL
Sbjct: 5 AEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYL 64
Query: 455 TLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKV 634
L LPV++ GY++NILDILKCICK CS +L EK A L++MRNP+ E L K++L KK+
Sbjct: 65 NLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKI 124
Query: 635 VEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQE 814
V+KC+ + ++ KA C+RCG +NGMVKK +L I+H+R+K+ D E SA++HT+E
Sbjct: 125 VKKCSSMTSN--KAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKE 182
Query: 815 YNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXXD 994
A + P V SL K + +EDCE+L L DRPEKL+ D
Sbjct: 183 SRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTD 242
Query: 995 GGTQSNENDITERLKRIIQANASLHQEISDTSLPT-KSLNAWIDLQVEVAQYINSDVRGI 1171
G QSNENDITERLK+IIQANASL E+ + + K L++W LQ VA Y+NSDVR +
Sbjct: 243 G-LQSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-V 300
Query: 1172 PFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAVPILVAR 1351
P + + +PLSGFVQRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI +AR
Sbjct: 301 PNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMAR 360
Query: 1352 ILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQPGADPISLISAARKRYADELKFGDI 1531
IL+YPERVSHHNIEKLRQ V NGP KYPGA ++ P LI + RK A+EL FG I
Sbjct: 361 ILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCI 420
Query: 1532 VDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 1711
VDRHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV
Sbjct: 421 VDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 480
Query: 1712 PQTEEARTEALLLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLIC 1888
PQTEEARTEALLLMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSL+C
Sbjct: 481 PQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMC 540
Query: 1889 SYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPHAKMRVYLNLTVAEKNYGKPAR-- 2062
SYM DGMD IDLPTPA++KP+ELWTGKQLF+VLLRP+A +RVY+NL V EK Y KP +
Sbjct: 541 SYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGD 600
Query: 2063 ----ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLA 2230
ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYS+LLRDY HAAATCMNRLA
Sbjct: 601 KREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLA 660
Query: 2231 KLS--ARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDDFIEEYNKGKLELQPGH 2404
KL ARWIGNHGFSIGIDDVQP KLI K K I +GY +CD IE+YN+GKL L+PG
Sbjct: 661 KLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGC 720
Query: 2405 DAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQ 2584
DA TLE++IT+ LN +R E VCM L WRNSPLIMSQCGSKGS INISQMVACVGQQ
Sbjct: 721 DATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQ 780
Query: 2585 SVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATEFFFHTMAGREGLVDTA 2764
SVGGRRAP+GF+DRSLPHFP+KSK P AKGFVANSFYSGL ATEFFFHTMAGREGLVDTA
Sbjct: 781 SVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTA 840
Query: 2765 VKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDCMDPAQMEEKTGQPLNF 2944
VKTADTGYMSRRL+K LEDLSIQYD TVRNAS I+QF+YGDD +DPA ME K G PLN
Sbjct: 841 VKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNL 900
Query: 2945 DRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGGCSEAFRDSLSKFL----- 3109
DR+ KVKATCP +E LSP +I + L +HDM G CSEAF+ SL+ FL
Sbjct: 901 DRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAK 960
Query: 3110 KEKCVASLRNTMQNLEMDGDKQGG--EDRRSLEKFYPNISGITSRQLEVFLRVCISRYHA 3283
+ + + L + +++ + + GG + + +E+ I G++ RQ+EVF++ CI+RY
Sbjct: 961 RLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLW 1020
Query: 3284 KKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPI 3463
K+ EPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPI
Sbjct: 1021 KRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPI 1080
Query: 3464 ITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHV 3643
ITA+LE+ N ARI K RI+KT+L QVAKSIKIVM++R AS+VITLD+ IQ +L +
Sbjct: 1081 ITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSL 1140
Query: 3644 DAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGI 3823
DA VK++IL+T ++KLK QH+KVL+T+KLEV+P D+ ++HFELH +KN LP ++V GI
Sbjct: 1141 DANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGI 1200
Query: 3824 DTVERVII--NKED---KEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTL 3988
TVER +I K D ++E+P YN+ VEGMGL VMGTEGV+GC+T SNH+MEV + L
Sbjct: 1201 KTVERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFL 1260
Query: 3989 GIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLML 4168
GIEAAR IIDEI TM HGM+IDIRHMMLL DLMT KGEVLGITR G+QKM SVLML
Sbjct: 1261 GIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLML 1320
Query: 4169 ASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALD 4348
ASFEKTADHL+ AAV GR+DKIEGVSECIIMGIPMQ+GTG+LKV+QR+ V LNY D
Sbjct: 1321 ASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPV-LNYGSD 1379
Query: 4349 PIIS 4360
IIS
Sbjct: 1380 SIIS 1383
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Cicer arietinum]
Length = 1399
Score = 1726 bits (4471), Expect = 0.0
Identities = 887/1420 (62%), Positives = 1077/1420 (75%), Gaps = 24/1420 (1%)
Frame = +2
Query: 173 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 352
M R FTK+P+IED+GPR+I I +STL E+EI K EV+V++G YYD +KP
Sbjct: 1 MNRSRTEGLVFTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEA 60
Query: 353 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 532
GLLD MGP K VC TCHG F+ C GHYGYL L PV++ GYL ++ ILKCICK C
Sbjct: 61 DGLLDSRMGPANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGC 120
Query: 533 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGM 712
+ +LL E R +L++MRN K + L K QL + ++++ K C RCG++NG+
Sbjct: 121 AGILLDEDTRKKYLKKMRNSKLDELQKIQLLESIMKRFR-----SAKFIKCQRCGYINGI 175
Query: 713 VKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKD 892
VK L IVH+ S + +E SA+SH +EY A+ ++PK V+SL + D
Sbjct: 176 VKLTRSTLRIVHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSD 235
Query: 893 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQ 1072
EDC LLYL++RPEKL+ DG +QSNENDITE+L++IIQANA+LH+
Sbjct: 236 EDCALLYLAERPEKLIITNIAVPPIVIRPSVIMDG-SQSNENDITEKLRKIIQANAALHK 294
Query: 1073 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGN 1252
E+ ++ TK + LQ VAQYINSDV+G P+S QA++PL+GFVQR+KGKQGRFR N
Sbjct: 295 ELEES---TKFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSN 351
Query: 1253 LSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKY 1432
LSGKRVEYTGRTVISPDPNLKITEVA+PI +ARILTYPERV+HHNIEKLRQC+RNGP+KY
Sbjct: 352 LSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKY 411
Query: 1433 PGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCH 1612
PGAK ++ G +L + RKR ADEL+FGDIVDRHLEDGD +LFNRQPSLHRMS+MCH
Sbjct: 412 PGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCH 471
Query: 1613 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE 1792
RARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALLLM VQNNLCTPKNGE
Sbjct: 472 RARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGE 531
Query: 1793 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQ 1972
ILVASTQDFLTSSFLITRKDTFYDR++FSLICSYMGDGMDPIDLPTPA++KPVELW+GKQ
Sbjct: 532 ILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQ 591
Query: 1973 LFNVLLRPHAKMRVYLNLTVAEKNYG------KPARETMCPNDGFVYFRNSELISGQLGK 2134
LF++LLRPHA +RVY+NLTV EK + K +TMCPNDGFVYFRNSELISGQLGK
Sbjct: 592 LFSILLRPHANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGK 651
Query: 2135 ATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIE 2314
TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAK SARWIGNHGFSIGIDDVQP + LI
Sbjct: 652 VTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHR 711
Query: 2315 KEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQ 2494
K++ I +GY +CD FIE +NKGKLEL PG DA TLEAKI Q LN++R TAKVCM L
Sbjct: 712 KKETITTGYSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLH 771
Query: 2495 WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKG 2674
WRNSPLIMSQCGSKGSPINI QMVACVGQQSVGG RA NGFVDRSLPHF KK+K P KG
Sbjct: 772 WRNSPLIMSQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKG 831
Query: 2675 FVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRN 2854
FVANSF++GL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL + YDYTVR+
Sbjct: 832 FVANSFFTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRD 891
Query: 2855 ASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPA-GDEISLSPSEICQKTD 3031
+ I+QF YGDD MDP+ ME K G+PLNFDR+ +K KA CP+ GD+I LS S++C+
Sbjct: 892 TNGGIVQFCYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIR 951
Query: 3032 ERL-------------SEHDMTPEGGCSEAFRDSLSKFLKEK---CVASLRNTMQNLEMD 3163
++L SE+D+ G S+ F SL F+K+ A N +NL
Sbjct: 952 KKLSEVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVKDNTKLTEAIAENDSKNL--- 1008
Query: 3164 GDKQGGEDRRSLEKFYPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEP 3343
+L+ F P ISGI+ RQLEVFL +C+SRY KK EP
Sbjct: 1009 ---------TNLKNFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSIGEP 1059
Query: 3344 GTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKAR 3523
GTQMTLKTFHFAGVASMNVTLGVPRI EII+ K+I TPI+TA LER+ N AR+VK R
Sbjct: 1060 GTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNANTARMVKGR 1119
Query: 3524 IEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQ 3703
IEKT L QVAKSIK+VM++R A++VI+LD+ IQ L++DA+ VK+SIL+T KLKLK +
Sbjct: 1120 IEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESILRTAKLKLKAE 1179
Query: 3704 HVKVLNTQKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDTVERVIINKEDKEKEMPK 3880
+VKVL+ +KL+V P+ + ++++HF+L+ +KN LP VVV G+ TVER ++ + K+K++ K
Sbjct: 1180 NVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPSVVVKGVKTVERAVLEIDKKDKKVEK 1239
Query: 3881 YNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTI 4060
+ L VEG GL V+G EGV+G +T+SNH+ME+L LGIEAARS IID+IQ TM SHGM+I
Sbjct: 1240 FALLVEGTGLQQVLGIEGVDGRKTRSNHVMEMLNVLGIEAARSTIIDQIQYTMGSHGMSI 1299
Query: 4061 DIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEG 4240
D+RH+MLLAD+MT +G+VLG+TR G+QKM SVLMLASFE + DHLF A++ GR D IEG
Sbjct: 1300 DVRHIMLLADIMTVRGQVLGMTRHGIQKMGRSVLMLASFESSTDHLFDASMRGRGDPIEG 1359
Query: 4241 VSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 4360
VS+CIIMG P+++GTGM+ ++QR+ L +DPI+S
Sbjct: 1360 VSDCIIMGKPIRVGTGMIDIKQRLDPP--VLPKGIDPILS 1397
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 1703 bits (4411), Expect = 0.0
Identities = 886/1413 (62%), Positives = 1064/1413 (75%), Gaps = 17/1413 (1%)
Frame = +2
Query: 173 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 352
M RG FTK+P++ED GPR+I+++ FS L +SEI K EV+V++G YYD KKPI
Sbjct: 1 MNRGRTEGITFTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIH 60
Query: 353 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 532
GLLDP MGP K C TCHG F CPGHYGYL L LPV++ GYL +I++ILKCICK C
Sbjct: 61 GGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGC 120
Query: 533 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQK-KVVEKCNRLVASGRKATVCSRCGFVNG 709
+ +LL E R L++MR+ K+ L K K ++++ C+++V C RCG++NG
Sbjct: 121 ARILLDEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVN-------CPRCGYING 173
Query: 710 MVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVK 889
VKK L I+H+ SK ++ E S +S ++ A+ +NP V SL + +
Sbjct: 174 SVKKLPASLIIMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKML 233
Query: 890 DEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLH 1069
DEDCELLY+++RPEKL+ D SNENDITERLK IIQANA L
Sbjct: 234 DEDCELLYVAERPEKLIITNIVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLR 292
Query: 1070 QEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRG 1249
QE+ ++S+ +K L+ W LQ EVAQ+INS+VRGIPF Q+ + L+GFVQRLKGK GRFRG
Sbjct: 293 QELQESSVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRG 352
Query: 1250 NLSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNK 1429
NLSGKRVEYTGRTVISPDPNLKI+EVA+PIL+A ILTYPERV+HHNIEKLRQCVRNGP+K
Sbjct: 353 NLSGKRVEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDK 412
Query: 1430 YPGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMC 1609
YPGA+ +++ G SL RKR ADEL+ GDIVDRHLEDGD +LFNRQPSLHRMSIM
Sbjct: 413 YPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMS 472
Query: 1610 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 1789
HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGVQNNLCTPKNG
Sbjct: 473 HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNG 532
Query: 1790 EILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGK 1969
EILVASTQDFLTSSFL+TRKDTFYDR++F+ IC+++GDG+D IDLPTPA+VKPVELW+GK
Sbjct: 533 EILVASTQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGK 592
Query: 1970 QLFNVLLRPHAKMRVYLNLTVAEKNYGK---PARE--TMCPNDGFVYFRNSELISGQLGK 2134
QLF++LLRPHA +VY+NLTV EK Y K RE T+CPNDGFVYFRN+ELISGQ+GK
Sbjct: 593 QLFSLLLRPHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGK 652
Query: 2135 ATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIE 2314
TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP + LI +
Sbjct: 653 VTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKK 712
Query: 2315 KEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQ 2494
K++ + GY KCD+ I+ +NKGKLEL G DA TLE +IT VLN +R KVCM L
Sbjct: 713 KDETLSEGYKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLH 772
Query: 2495 WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKG 2674
WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP +K P AKG
Sbjct: 773 WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKG 832
Query: 2675 FVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRN 2854
FVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSR+LMK++EDL + YDYTVRN
Sbjct: 833 FVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRN 892
Query: 2855 ASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCP-AGDEISLSPSEICQKTD 3031
A SI+QF YGDD MDP ME K G+PLNF+R+ +K KA CP D+ LS S++C+
Sbjct: 893 AGGSIVQFCYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQ 952
Query: 3032 ERLSEHDMTP-------EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDR 3190
E+LSE ++ E G S F SL F+K+ N ++ + ++
Sbjct: 953 EKLSEFGVSREVEKGVLEVGFSADFVQSLQSFIKD-----------NTKLTEETFTDDNS 1001
Query: 3191 RSLEKFYPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTF 3370
+ L+KF ISGIT QLEVFL +C+SRYH+KK EPGTQMTLKTF
Sbjct: 1002 QILKKFGERISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTF 1061
Query: 3371 HFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQV 3550
HFAGVASMNVTLGVPR+KEI++ K ISTPIITA LER ARIVK RIEKT L QV
Sbjct: 1062 HFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQV 1121
Query: 3551 AKSIKIVMSARLASIVITLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQK 3730
AKSIK+V+++RLAS+VITLD+ IQ L++DA VK+SILQTKK KLK +H+K+L+ +K
Sbjct: 1122 AKSIKVVVTSRLASVVITLDMERIQDAHLNIDANIVKESILQTKKAKLKPEHIKILDVKK 1181
Query: 3731 LEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDTVERVIINK-EDKEKEMPKYNLFVEGM 3904
L VVPQ D+SKLHF+L+ +KN LP VVV GI T +RV+I+K EDK + K+ L VEG
Sbjct: 1182 LRVVPQDGDRSKLHFQLNYLKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGT 1241
Query: 3905 GLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSAIIDEIQTTM-SSHGMTIDIRHMML 4081
G VMG EGV+GC+T SNHI EV TLGIEAAR I+ EI+ M +HGM ID RHMML
Sbjct: 1242 GFREVMGVEGVDGCKTVSNHIHEVRDTLGIEAARECIVKEIKYVMVDTHGMNIDTRHMML 1301
Query: 4082 LADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIM 4261
LAD+MT+ G +LGI R G+ KM SVLMLASFE+TAD LF A+V GR+D I GVSE IIM
Sbjct: 1302 LADVMTATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIM 1361
Query: 4262 GIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 4360
GIP+ +GTGM+KV+QR++ + L + PI+S
Sbjct: 1362 GIPITIGTGMIKVKQRLELPD--LPHGASPILS 1392
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 1686 bits (4365), Expect = 0.0
Identities = 869/1396 (62%), Positives = 1055/1396 (75%), Gaps = 9/1396 (0%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
+FTKQPYIEDVGP +I+SI FS + EI+KAAEV+V+R YY+ + KP+E GLLDP MG
Sbjct: 8 EFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRMG 67
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K +C TCH F CPGH+GYL L LPVY+ G+L ILDILKCICK+CS++L+ EK
Sbjct: 68 PPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEKL 127
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 739
L++MRNPK EPL KT+L K VV+KC+ ++AS R T C CG++NGMVKK +G
Sbjct: 128 YEDHLKKMRNPKMEPLKKTELAKAVVKKCS-MMASQRIIT-CKNCGYLNGMVKKVAAQMG 185
Query: 740 IV---HERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELL 910
I+ H+RSK++ +E+ SA+SHT+E + + ++P +V L K + D+DCELL
Sbjct: 186 IIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCELL 245
Query: 911 YLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTS 1090
Y++ RPE L GGTQSNEND+TER+K+I+Q NAS + ++ +
Sbjct: 246 YIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQAT 304
Query: 1091 LPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRV 1270
K++ W +Q EVAQYINS+VRGIP + ++PLSG +QRLKGKQGRFR NLSGKRV
Sbjct: 305 TSPKNMQVWDTVQSEVAQYINSEVRGIP-NQPDSKPLSGILQRLKGKQGRFRANLSGKRV 363
Query: 1271 EYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFI 1450
EYTGRTVISPDPNLKITEV +PIL+ARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +
Sbjct: 364 EYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARSV 423
Query: 1451 KQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMP 1630
+ P +L+ RKR ADEL G IVDRHLE+GD +LFNRQPSLHRMSIMCHRARIMP
Sbjct: 424 RYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMP 483
Query: 1631 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 1810
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAST
Sbjct: 484 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAST 543
Query: 1811 QDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLL 1990
QDFLTSS+LITRKDTFYDRA+FSLICSYMGD MD IDLPTP ++KP+ELWTGKQ+F+VLL
Sbjct: 544 QDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSVLL 603
Query: 1991 RPHAKMRVYLNLTVAEKNYGK-PARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGL 2167
RP+A +RVY+ L V EKN+ K ETMC NDG+VYFRNSELISGQLGKATLGNGNKDGL
Sbjct: 604 RPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNKDGL 663
Query: 2168 YSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGK 2347
YSVLLRDY SHAAA CMNRLAKLSARWIG HGFS+GIDDVQP ++L E+EK I GY
Sbjct: 664 YSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGYED 723
Query: 2348 CDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQC 2527
C I ++N+G+L+L+ G D +LE+ IT +LN IR T K+CM L WRNSPLIMSQC
Sbjct: 724 CGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMSQC 783
Query: 2528 GSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLT 2707
GSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P+AKGFVANSFYSGLT
Sbjct: 784 GSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSGLT 843
Query: 2708 ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYG 2887
ATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS I+QF YG
Sbjct: 844 ATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYG 903
Query: 2888 DDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEIS-LSPSEICQKTDERLSEHDMTPE 3064
DD MDP ME K G PLNFDR+ +K++ATCP S LS E+ QK +E L HD +
Sbjct: 904 DDGMDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEELLQKFEEELVRHDTSRV 963
Query: 3065 GGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 3244
C++AF SL +FL + LR+T S + + SG+T +Q+
Sbjct: 964 --CTDAFVKSLREFLS---LLGLRST-----------------SPSQVFYKASGVTDKQI 1001
Query: 3245 EVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIK 3424
EVF+++C+SRY K EPGTQMTLKTFHFAGVASMN+T GVPRI
Sbjct: 1002 EVFVKICVSRYREKTIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIN 1061
Query: 3425 EIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVIT 3604
EII+A KNISTP+I+A+LE AR VK RIEKT L QVA+SI+++M++ AS+ I
Sbjct: 1062 EIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRII 1121
Query: 3605 LDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHT 3784
LD I+ L + + VK SIL+T ++KL + ++++L++ L++ P DKS +HF LH
Sbjct: 1122 LDNKRIEEACLSISPWSVKTSILKTPRIKLNDDNIRILDS-GLDITPVGDKSGIHFGLHN 1180
Query: 3785 IKNKLPMVVVSGIDTVERVIINKE-DKEKEM---PKYNLFVEGMGLLGVMGTEGVNGCET 3952
+KN LP ++V+GI TVERV++ ++ DK+K++ ++ LFVEG LL VMGT G+NG T
Sbjct: 1181 LKNVLPNIIVNGIKTVERVVVAEDTDKKKQIDGKKRWKLFVEGTNLLAVMGTPGINGRTT 1240
Query: 3953 KSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRT 4132
SN+I+EV +TLGIEAAR+ IIDEI + M +HGM+IDIRHMMLLAD+MT +GEVLGI RT
Sbjct: 1241 TSNNIVEVSKTLGIEAARTTIIDEIGSVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRT 1300
Query: 4133 GVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRM 4312
G+QKM SVLM ASFE+T DHLFSAAV+G+ D IEGV+EC+IMGIPM++GTG+LKV QR
Sbjct: 1301 GIQKMDKSVLMQASFERTGDHLFSAAVSGKVDNIEGVTECVIMGIPMKLGTGILKVLQRT 1360
Query: 4313 QQQEVKLNYALDPIIS 4360
KL Y DPIIS
Sbjct: 1361 DDLP-KLKYGADPIIS 1375
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 1685 bits (4364), Expect = 0.0
Identities = 869/1397 (62%), Positives = 1047/1397 (74%), Gaps = 10/1397 (0%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
+FTKQPYIEDVGP +I+SI FS L + E++KAAEV+V++ YY+ + KP E+GLLD MG
Sbjct: 8 EFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARMG 67
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K +C TC G F CPGHYGYL L LPVY+ G+ ILDILKCICK+CS++LL EK
Sbjct: 68 PPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEKL 127
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 739
L++MRNPK EPL KT+L K VV+KC+ + + ++ C +CG++NGMVKK +G
Sbjct: 128 YEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIAAQMG 185
Query: 740 I--VHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLY 913
I H+RSK++ +E SA+SHT+E + + ++P +V L K + D+DCELLY
Sbjct: 186 IGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELLY 245
Query: 914 LSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSL 1093
++ RPE L+ GGT+SNENDITERLK IIQ NA LH+ +S +
Sbjct: 246 IAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPTT 304
Query: 1094 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 1273
K++ W +Q EVA+YINS+VRG+ + PLSG +QRLKGKQGRFR NLSGKRVE
Sbjct: 305 SPKNMQVWDTVQSEVAKYINSEVRGVQNQPEKT-PLSGLLQRLKGKQGRFRANLSGKRVE 363
Query: 1274 YTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 1453
YTGRTVISPDPNLKITEV +PIL+ARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ ++
Sbjct: 364 YTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 1454 QPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPW 1633
P +L+ RKR ADEL G IVDRHLE+GD +LFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 1634 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQ 1813
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 1814 DFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLR 1993
DFLT+SFLITRKDTFYDRA+FSLICSYMGDGMD IDLPTP ++KP+ELWTGKQLF+VLLR
Sbjct: 544 DFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVLLR 603
Query: 1994 PHAKMRVYLNLTVAEKNYGKPAR---ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 2164
P+A +RVY+ L V EKN+ K ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 604 PNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGNKDG 663
Query: 2165 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 2344
LYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP ++L E++ I+ GY
Sbjct: 664 LYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFGYD 723
Query: 2345 KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 2524
+C IEE+N+G L+L+ G D +LEA+IT +LN IR T K CM L WRNSPLIMSQ
Sbjct: 724 QCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQ 783
Query: 2525 CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 2704
CGSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 784 CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGL 843
Query: 2705 TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 2884
TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS I+QF Y
Sbjct: 844 TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 903
Query: 2885 GDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEIS-LSPSEICQKTDERLSEHDMTP 3061
GDD MDPA ME K G PLNFDR+ +K++ATCP + LS E+ QK +E L HD +
Sbjct: 904 GDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKSR 963
Query: 3062 EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQ 3241
C++AF SL +F+ V S S + SG+T +Q
Sbjct: 964 V--CTDAFVKSLREFVSLLGVKS--------------------ASTPQVLYKASGVTDKQ 1001
Query: 3242 LEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRI 3421
LEVF+++C+SRY KK EPGTQMTLKTFHFAGVASMN+T GVPRI
Sbjct: 1002 LEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRI 1061
Query: 3422 KEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVI 3601
EII+A KNISTP+I+A+LE AR VK RIEKT L QVA+SI+++M++ AS+ I
Sbjct: 1062 NEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRI 1121
Query: 3602 TLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELH 3781
LD +I+ L + + VK SIL+T ++KL + ++VL+T L++ P DKS+ HF LH
Sbjct: 1122 ILDNKIIEEACLSISPWSVKNSILKTPRIKLNDNDIRVLDT-GLDITPVVDKSRTHFNLH 1180
Query: 3782 TIKNKLPMVVVSGIDTVERVIINKE-DKEKEM---PKYNLFVEGMGLLGVMGTEGVNGCE 3949
+KN LP ++V+GI TVERV++ ++ DK K++ ++ LFVEG LL VMGT G+NG
Sbjct: 1181 NLKNVLPNIIVNGIKTVERVVVAEDMDKNKQIDGKTRWKLFVEGTNLLAVMGTPGINGRT 1240
Query: 3950 TKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITR 4129
T SN+++EV +TLGIEAAR+ IIDEI T M +HGM+IDIRHMMLLAD+MT +GEVLGI R
Sbjct: 1241 TTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQR 1300
Query: 4130 TGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQR 4309
TG+QKM SVLM ASFE+T DHLFSAA++G+ D IEGV+EC+IMGIPM++GTG+LKV QR
Sbjct: 1301 TGIQKMDKSVLMQASFERTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQR 1360
Query: 4310 MQQQEVKLNYALDPIIS 4360
KL Y DPIIS
Sbjct: 1361 TDDLP-KLKYGADPIIS 1376
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 1682 bits (4356), Expect = 0.0
Identities = 866/1397 (61%), Positives = 1048/1397 (75%), Gaps = 10/1397 (0%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
++TK+PYIEDVG +I+SI FS L + E++KAAEV+V++ YYDP+ KP E GLLDP MG
Sbjct: 8 EYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGLLDPRMG 67
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K +C TC G F CPGHYGYL L LPVY+ GY ILDILKCICK CS++LL EK
Sbjct: 68 PPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNMLLDEKL 127
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 739
L++MRNPK EPL KT+L K VV+KC+ + + ++ C +CG++NGMVKK +G
Sbjct: 128 YEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIPAQMG 185
Query: 740 I--VHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLY 913
I H+RSK++ +E+ +A+SH +E + + ++P VV L K + D+DCELLY
Sbjct: 186 IGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDCELLY 245
Query: 914 LSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSL 1093
++ RPE L+ GG+QSNEND++ RLK+IIQ NASLH+ +S +
Sbjct: 246 IAHRPENLIITCMLVPPLSIRPSVMV-GGSQSNENDLSARLKQIIQDNASLHRILSQPTT 304
Query: 1094 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 1273
K++ W +Q EVA+YINS+VRG+ + ++P+SG +QRLKGKQGRFR NLSGKRVE
Sbjct: 305 SAKNMQVWDTVQSEVAKYINSEVRGVQ-NQPDSKPMSGILQRLKGKQGRFRANLSGKRVE 363
Query: 1274 YTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 1453
YTGRTVISPDPNLKITEV +PIL+ARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ ++
Sbjct: 364 YTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 1454 QPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPW 1633
P +L+ RKR ADEL G IVDRHLE+GD +LFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 1634 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQ 1813
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 1814 DFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLR 1993
DFLTSSFLITRKDTFYDRA+FSLICSYMGDGMD IDLPTP ++KP+ELWTGKQ+F+VLLR
Sbjct: 544 DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSVLLR 603
Query: 1994 PHAKMRVYLNLTVAEKNYGKPAR---ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 2164
P+A +RVY+ L V EKN+ K ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 604 PNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGNKDG 663
Query: 2165 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 2344
LYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP ++L +++ I+SGY
Sbjct: 664 LYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQSGYD 723
Query: 2345 KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 2524
C IE +N+G L+L+ G D TLEA IT +LN IR +T K CM L WRNSPLIMSQ
Sbjct: 724 DCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLIMSQ 783
Query: 2525 CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 2704
CGSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 784 CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGL 843
Query: 2705 TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 2884
TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS I+QF Y
Sbjct: 844 TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 903
Query: 2885 GDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEIS-LSPSEICQKTDERLSEHDMTP 3061
GDD MDPA ME K G PLNF+R+ +K++ATCP + LS E+ QK +E L HD
Sbjct: 904 GDDGMDPALMEGKDGAPLNFNRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKNR 963
Query: 3062 EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQ 3241
C++AF V SLR+ + L G S + SG+T +Q
Sbjct: 964 V--CTDAF------------VKSLRDFVSLL--------GVKSASPPQVLYKASGVTDKQ 1001
Query: 3242 LEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRI 3421
LEVF+++C+SRY KK EPGTQMTLKTFHFAGVASMN+T GVPRI
Sbjct: 1002 LEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRI 1061
Query: 3422 KEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVI 3601
EII+A KNISTP+I+A+LE AR VK RIEKT L QVA+SI+++M++ AS+ I
Sbjct: 1062 NEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRI 1121
Query: 3602 TLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELH 3781
LD +I+ L + + VK SIL+T ++KL + ++VL+T L++ P DKS+ HF LH
Sbjct: 1122 ILDNKIIEEACLSISPWSVKNSILKTPRIKLTDNDIRVLDT-GLDITPVVDKSRTHFNLH 1180
Query: 3782 TIKNKLPMVVVSGIDTVERVIINKE-DKEKEM---PKYNLFVEGMGLLGVMGTEGVNGCE 3949
+KN LP ++V+GI TVERV++ ++ DK K++ ++ LFVEG LL VMGT G+NG
Sbjct: 1181 NLKNVLPSIIVNGIKTVERVVVAEDMDKNKQIDGKKRWKLFVEGTNLLAVMGTPGINGRT 1240
Query: 3950 TKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITR 4129
T SN+++EV +TLGIEAAR+ IIDEI T M +HGM+IDIRHMMLLAD+MT +GEVLGI R
Sbjct: 1241 TTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQR 1300
Query: 4130 TGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQR 4309
TG+QKM SVLM ASFE+T DHLFSAA++G+ D IEGV+EC+IMGIPM++GTG+LKV QR
Sbjct: 1301 TGIQKMDKSVLMQASFERTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQR 1360
Query: 4310 MQQQEVKLNYALDPIIS 4360
KL Y DPIIS
Sbjct: 1361 TDDLP-KLKYGADPIIS 1376
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 1681 bits (4353), Expect = 0.0
Identities = 864/1391 (62%), Positives = 1041/1391 (74%), Gaps = 6/1391 (0%)
Frame = +2
Query: 206 TKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGPT 385
TK+P+IEDVG RRI+SI FS +E+ ++AEV+V+ Y+ KP+ +GLLD MG
Sbjct: 11 TKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPNGLLDTRMGAA 70
Query: 386 LKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDRL 565
K G C TCHG+F++CPGH+GYL L LPV++ G+ ILD+LKCICK CS +LL EKDRL
Sbjct: 71 NKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRVLLMEKDRL 130
Query: 566 AFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGIV 745
FL++MRNPK +PL K+ + KKV +KC K + C CGF+NG+ KK L I+
Sbjct: 131 EFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVAKKGRAGLIIL 182
Query: 746 HERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLYLSDR 925
H+ SK D S+ E A+SH +E ++ ++P +V SL K + DEDCELL L DR
Sbjct: 183 HDCSKTLDGSTEELRDALSHKKE--KLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGDR 240
Query: 926 PEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSLPTKS 1105
PEKL+ GG SNE+ IT LK I N+ L + + K
Sbjct: 241 PEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKC 300
Query: 1106 LNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGR 1285
+ W LQ++V +YINSD +P S G VQRLKGK GRFRGNLSGKR EYTGR
Sbjct: 301 FDCWQHLQLQVVEYINSDAPSLPESQHR-----GLVQRLKGKTGRFRGNLSGKRTEYTGR 355
Query: 1286 TVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQPGA 1465
TVISPDPNL+ITEVA+PIL+AR+LTYPERVS++NIEKLRQC+RNGP+K+PGA FI QP
Sbjct: 356 TVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDG 415
Query: 1466 DPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRTLR 1645
+ L R+ A +LK+G +V+RHLEDGD +LFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416 TKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 475
Query: 1646 FNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLT 1825
FNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535
Query: 1826 SSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPHAK 2005
SSFL+TRKD FYDR+SFSL+CSY+GD M+ IDLPTPAL+KP+ELWTGKQLF+VL+RP+A
Sbjct: 536 SSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAC 595
Query: 2006 MRVYLNLTVAEKNYGKPARET-----MCPNDGFVYFRNSELISGQLGKATLGNGNKDGLY 2170
+V+LNLTV EK Y P T MCPNDGFVYFRNSEL+SGQ+GKATLGNGNKDG++
Sbjct: 596 TKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMF 655
Query: 2171 SVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKC 2350
S L+RDY SHAAA+CMNRLAK SAR+IGNHGFSIG+DDVQP + L EK+ +I GY C
Sbjct: 656 STLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDC 715
Query: 2351 DDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCG 2530
D I Y+KG L LQPG +A TLE IT+VLN IR E KVCM L WRNSPLIMSQCG
Sbjct: 716 HDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCG 775
Query: 2531 SKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTA 2710
SKGSPINISQMVACVGQQSVGGRRAPNGF+DR+LPHFP SK P AKGFVANSFY+GLTA
Sbjct: 776 SKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTA 835
Query: 2711 TEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGD 2890
TEFFFHTM GREGLVDTAVKTA+TGYMSRRLMK LEDLS+ YD TVRNAS I+QF+YGD
Sbjct: 836 TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGD 895
Query: 2891 DCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGG 3070
D MDPA+ME K G+PLN D++ MKV ATCP + +LSP EI Q +++LSEHD + + G
Sbjct: 896 DGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDG 955
Query: 3071 CSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLEV 3250
CSE F+ L+ FL+++ + L++T + L +D D G E NISGI+ +QL+V
Sbjct: 956 CSEKFKQLLTYFLEDR-IKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQV 1014
Query: 3251 FLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 3430
FL C+SRYH KK EPGTQMTLKTFHFAGVASMNVTLGVPRIKEI
Sbjct: 1015 FLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1074
Query: 3431 IDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLD 3610
I+A K ISTPIITA+L E + ARIVK +EK +L +VA++IKIV+ + ++V+ LD
Sbjct: 1075 INAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLD 1134
Query: 3611 IGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQA-DKSKLHFELHTI 3787
+ I+AL + + A V+ SIL K+KLK +HV+V++ KL + P DKSKL +ELH +
Sbjct: 1135 MQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHL 1194
Query: 3788 KNKLPMVVVSGIDTVERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHI 3967
K+ LP V+V GI TVER +I++ +E + +Y L VEG LL VMGT GV+ +TKSNHI
Sbjct: 1195 KSMLPKVIVKGIPTVERAVISETGEEND-KRYKLLVEGTNLLAVMGTPGVDAMKTKSNHI 1253
Query: 3968 MEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKM 4147
MEV RTLGIEAAR +IIDEIQ TM SHGM ID RHMMLLADLMT KGE+LGITR G+ KM
Sbjct: 1254 MEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKM 1313
Query: 4148 KDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEV 4327
K SVLMLASFEKTA+HLF+A+ +GRED+IEGVSECIIMGIPMQ+GTG+LKVRQR+
Sbjct: 1314 KSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLP- 1372
Query: 4328 KLNYALDPIIS 4360
+ Y DPI++
Sbjct: 1373 EFKYQPDPILA 1383
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 1677 bits (4344), Expect = 0.0
Identities = 867/1394 (62%), Positives = 1046/1394 (75%), Gaps = 7/1394 (0%)
Frame = +2
Query: 197 FQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSK-KPIEHGLLDPH 373
F FTK+P++ED+GPR+I+S+ F L EI+KAAE +VY+ YY+ + KP EHG+LD
Sbjct: 8 FNFTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDTR 67
Query: 374 MGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGE 553
MG + K G C TC G F CPGH+GYL L LPV+H GY + +L+CICK C+ +LL E
Sbjct: 68 MGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLFE 127
Query: 554 KDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKM 733
++R FL+++RNP+ E K KKV++KC R+ +C RCG NG+VKK
Sbjct: 128 EERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRV-------RICPRCGDYNGVVKKAGPT 180
Query: 734 LGIVHERSKVN-DSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELL 910
I H+RSK N D + E +A+S T+ Y+ S + + + P+ +L + + DEDC+LL
Sbjct: 181 FRISHDRSKANYDKLTKECKTAISQTK-YSNSDFNMVENLTPQRALALFERMVDEDCDLL 239
Query: 911 YLSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTS 1090
YL DRPEKL+ G++ NEN++T +L I+Q N +L ++ +
Sbjct: 240 YLYDRPEKLIITHIAVPPAGIRPTY--QSGSRLNENELTTKLWEIVQINHTLIDHVNKGN 297
Query: 1091 LPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRV 1270
LP ++ W+ LQV VA YINS++ +P + Q ++ G VQRLKGKQGRFR NL GKRV
Sbjct: 298 LPQYYMDTWVLLQVRVALYINSELPSLPLNYQPSKFEGGLVQRLKGKQGRFRSNLEGKRV 357
Query: 1271 EYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFI 1450
++TGRTVISPDPNLKITEVA+P L+A+ILTY ERV+ HNIEKLRQCVRNGP KYPGA F+
Sbjct: 358 DFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVKYPGANFV 417
Query: 1451 KQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMP 1630
G D +SL +KR ADELKFGD V+RHLEDG+ +LFNRQPSLHRMSIMCHRAR+MP
Sbjct: 418 IS-GGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMCHRARVMP 476
Query: 1631 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 1810
WRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQ+NLCTPKNGEILVAST
Sbjct: 477 WRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVAST 536
Query: 1811 QDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLL 1990
QDFLTSS+LITRKDTFYDRA+FSL+CSYMGDGM+ IDLPTPAL+KPVELWTGKQLF+VL+
Sbjct: 537 QDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLI 596
Query: 1991 RPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLY 2170
RPHA M+VY+NL++ EKNY K ETMC NDGFVY RNSELISGQLGKATLGNGNKDGL+
Sbjct: 597 RPHAHMKVYVNLSLMEKNYSKGG-ETMCANDGFVYIRNSELISGQLGKATLGNGNKDGLF 655
Query: 2171 SVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKC 2350
SVLLRDY SHAAA+CMNRLAKLSARWIGNHGFSIGIDDV P L +KE++I+ GY C
Sbjct: 656 SVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNC 715
Query: 2351 DDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCG 2530
D FI+ Y+KGKL L+PG +A TLEA+IT+VLN IR AKVCM L WRNSPLIMSQCG
Sbjct: 716 DAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCG 775
Query: 2531 SKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTA 2710
SKGSPINISQM+ACVGQQSVGGRRAPNGF+DRSLPHFP+ K P AKGFVANSFY+GLTA
Sbjct: 776 SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTA 835
Query: 2711 TEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGD 2890
EFFFHTM GREGLVDTAVKTADTGY+SRRL+K+LEDLS YD TVRN+S +IIQF YGD
Sbjct: 836 AEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGD 895
Query: 2891 DCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGG 3070
D MDPA+ME K+G PLN DR+ MK+KATCPA SLSPSEI ++RLS+HDMTPE G
Sbjct: 896 DGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERG 955
Query: 3071 CSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLEV 3250
CS AF++ LS F+K++ + +++ T L +D D E LE NISGI+ +QL V
Sbjct: 956 CSMAFKEELSNFIKKR-MDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRV 1014
Query: 3251 FLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 3430
FL CISRYH K+ EPGTQMTLKTFHFAGVASMN+TLGVPRIKEI
Sbjct: 1015 FLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEI 1074
Query: 3431 IDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLD 3610
+ A K ISTPIITA L + + K ARIVK RIEKTLL +VAK++KI ++ ASI ITLD
Sbjct: 1075 LGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQASINITLD 1134
Query: 3611 IGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNT----QKLEV-VPQADKSKLHFE 3775
+ I+AL++ +DA V SI + K K+ +KV T KL++ +P+ + ++ +
Sbjct: 1135 MKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKILLPEIGRKEVLYS 1194
Query: 3776 LHTIKNKLPMVVVSGIDTVERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETK 3955
LH +++ LP ++V GI TVER +IN K NL VEG LL VMGT GV+G T
Sbjct: 1195 LHLLQSLLPKIIVKGIPTVERAVIN-----NVKGKLNLLVEGTNLLAVMGTPGVDGRNTT 1249
Query: 3956 SNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTG 4135
SNHI+EV TLGIEAAR +IIDEIQ TM SHGM+ID+RHMMLLADLMT +G VLGI R G
Sbjct: 1250 SNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVLGIQRFG 1309
Query: 4136 VQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQ 4315
+ KMK+SVLMLASFE+TAD LF A GR D I GVSECIIMG+PMQ+GTG+L V+QR
Sbjct: 1310 ITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILSVQQR-P 1368
Query: 4316 QQEVKLNYALDPII 4357
+Q KL Y DPII
Sbjct: 1369 EQLAKLTYGPDPII 1382
>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1376
Score = 1669 bits (4321), Expect = 0.0
Identities = 864/1397 (61%), Positives = 1042/1397 (74%), Gaps = 10/1397 (0%)
Frame = +2
Query: 200 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 379
+FTK+PYIEDVGP +I+SI FS L + E++KAAEV+V+ YD S KP E+GLLDP MG
Sbjct: 8 EFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRMG 67
Query: 380 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 559
P K +C TC G F CPGHYGYL L LPVY+ GY ILDILKCICK+CS++LL EK
Sbjct: 68 PPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEKL 127
Query: 560 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKM-- 733
L++MRNP+ EPL KT+L K VV+KC+ + + ++ C +CG++NGMVKK
Sbjct: 128 YEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIAAQFG 185
Query: 734 LGIVHERSKVNDSSSNEYTSAVSHTQEYNASGVTVPDEMNPKVVYSLLKNVKDEDCELLY 913
+GI H+RSK++ +E SA+SHT++ A+ + ++P +V L K + D+DCELLY
Sbjct: 186 IGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCELLY 245
Query: 914 LSDRPEKLMXXXXXXXXXXXXXXXXXDGGTQSNENDITERLKRIIQANASLHQEISDTSL 1093
++ RPE L+ GG QSNEND+T RLK+II NASLH+ +S +
Sbjct: 246 IAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQPTS 304
Query: 1094 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 1273
K++ W +Q+EVA+YINS+VRG + PLSG +QRLKGK GRFR NLSGKRVE
Sbjct: 305 SPKNMQVWDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRLKGKGGRFRANLSGKRVE 363
Query: 1274 YTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 1453
+TGRTVISPDPNLKITEV +PIL+A+ILT+PE VS HNIEKLRQCVRNGPNKYPGA+ ++
Sbjct: 364 FTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 1454 QPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPW 1633
P +L+ RKR ADEL G IVDRHL++GD +LFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 1634 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQ 1813
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 1814 DFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLR 1993
DFLTSSFLITRKDTFYDRA+FSLICSYMGDGMD IDLPTP ++KP+ELWTGKQ+F+VLLR
Sbjct: 544 DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVLLR 603
Query: 1994 PHAKMRVYLNLTVAEKNYGKPAR---ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 2164
P+A +RVY+ L V EKN+ K ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 604 PNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGNKDG 663
Query: 2165 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 2344
LYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP ++L E++ I+ GY
Sbjct: 664 LYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYD 723
Query: 2345 KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 2524
+C IEE+N+G L+L+ G D +LEA+IT +LN IR T K CM L WRNSPLIMSQ
Sbjct: 724 QCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQ 783
Query: 2525 CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 2704
CGSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 784 CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGL 843
Query: 2705 TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 2884
TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS I+QF Y
Sbjct: 844 TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 903
Query: 2885 GDDCMDPAQMEEKTGQPLNFDRILMKVKATC-PAGDEISLSPSEICQKTDERLSEHDMTP 3061
GDD MDPA ME K G PLNF+R+ +KV+ATC P LS E+ QK +E L HD +
Sbjct: 904 GDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRHDKSR 963
Query: 3062 EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQ 3241
C++AF SL +F+ V S S + SG+T +Q
Sbjct: 964 V--CTDAFVKSLREFVSLLGVKS--------------------ASPPQVLYKASGVTDKQ 1001
Query: 3242 LEVFLRVCISRYHAKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRI 3421
LEVF+++C+ RY KK EPGTQMTLKTFHFAGVASMN+T GVPRI
Sbjct: 1002 LEVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRI 1061
Query: 3422 KEIIDAKKNISTPIITAKLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVI 3601
EII+A KNISTP+I+A+LE AR VK RIEKT L QVA+SI+++M++ AS+ I
Sbjct: 1062 NEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRI 1121
Query: 3602 TLDIGMIQALRLHVDAYRVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELH 3781
LD +I+ L + + VK SIL+T ++KL + ++VL+T L++ P DKS+ HF LH
Sbjct: 1122 ILDNKIIEEACLSITPWSVKNSILKTPRIKLNDNDIRVLDT-GLDITPVVDKSRAHFNLH 1180
Query: 3782 TIKNKLPMVVVSGIDTVERVIINKE-DKEKEM---PKYNLFVEGMGLLGVMGTEGVNGCE 3949
+KN LP ++V+GI TVERV++ ++ DK K++ K+ LFVEG LL VMGT G+NG
Sbjct: 1181 NLKNVLPNIIVNGIKTVERVVVAEDMDKSKQIDGKTKWKLFVEGTNLLAVMGTPGINGRT 1240
Query: 3950 TKSNHIMEVLRTLGIEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITR 4129
T SN+++EV +TLGIEAAR+ IIDEI T M +HGM+IDIRHMMLLAD+MT +GEVLGI R
Sbjct: 1241 TTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQR 1300
Query: 4130 TGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQR 4309
TG+QKM SVLM ASFE+T DHLFSAA +G+ D IEGV+EC+IMGIPM++GTG+LKV QR
Sbjct: 1301 TGIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQR 1360
Query: 4310 MQQQEVKLNYALDPIIS 4360
KL Y DPIIS
Sbjct: 1361 TDDLP-KLKYGPDPIIS 1376