BLASTX nr result
ID: Catharanthus22_contig00002058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00002058
(673 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [C... 61 4e-07
gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus... 61 4e-07
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr... 61 4e-07
ref|XP_006397284.1| hypothetical protein EUTSA_v10029123mg [Eutr... 61 4e-07
ref|XP_006418719.1| hypothetical protein EUTSA_v10002800mg, part... 61 4e-07
gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theob... 61 4e-07
ref|XP_006298879.1| hypothetical protein CARUB_v10014999mg, part... 61 4e-07
ref|XP_006288930.1| hypothetical protein CARUB_v10002294mg [Caps... 61 4e-07
ref|NP_187620.1| 40S ribosomal protein S28-1 [Arabidopsis thalia... 61 4e-07
ref|NP_201219.1| 40S ribosomal protein S28-2 [Arabidopsis thalia... 61 4e-07
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com... 61 4e-07
gb|ABY77634.1| At5g03850 [Arabidopsis thaliana] gi|166007603|gb|... 61 4e-07
ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocar... 60 5e-07
gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus... 60 6e-07
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] 60 8e-07
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C... 59 1e-06
ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [C... 59 1e-06
ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat... 59 1e-06
ref|XP_002322747.1| hypothetical protein POPTR_0016s06300g [Popu... 59 1e-06
ref|XP_004489433.1| PREDICTED: 40S ribosomal protein S28-like [C... 59 1e-06
>ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [Citrus sinensis]
Length = 65
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus vulgaris]
Length = 65
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQ+KHAIVVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQVKHAIVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
gi|557532022|gb|ESR43205.1| hypothetical protein
CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 50 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 79
>ref|XP_006397284.1| hypothetical protein EUTSA_v10029123mg [Eutrema salsugineum]
gi|557098301|gb|ESQ38737.1| hypothetical protein
EUTSA_v10029123mg [Eutrema salsugineum]
Length = 64
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_006418719.1| hypothetical protein EUTSA_v10002800mg, partial [Eutrema
salsugineum] gi|567170055|ref|XP_006398843.1|
hypothetical protein EUTSA_v10015973mg, partial [Eutrema
salsugineum] gi|557096647|gb|ESQ37155.1| hypothetical
protein EUTSA_v10002800mg, partial [Eutrema salsugineum]
gi|557099933|gb|ESQ40296.1| hypothetical protein
EUTSA_v10015973mg, partial [Eutrema salsugineum]
Length = 102
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 39 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 68
>gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
Length = 65
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_006298879.1| hypothetical protein CARUB_v10014999mg, partial [Capsella rubella]
gi|482567588|gb|EOA31777.1| hypothetical protein
CARUB_v10014999mg, partial [Capsella rubella]
Length = 92
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 29 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 58
>ref|XP_006288930.1| hypothetical protein CARUB_v10002294mg [Capsella rubella]
gi|482557636|gb|EOA21828.1| hypothetical protein
CARUB_v10002294mg [Capsella rubella]
Length = 111
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 48 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 77
>ref|NP_187620.1| 40S ribosomal protein S28-1 [Arabidopsis thaliana]
gi|15237548|ref|NP_196005.1| 40S ribosomal protein S28-1
[Arabidopsis thaliana] gi|297797427|ref|XP_002866598.1|
hypothetical protein ARALYDRAFT_919718 [Arabidopsis
lyrata subsp. lyrata] gi|297810469|ref|XP_002873118.1|
hypothetical protein ARALYDRAFT_325035 [Arabidopsis
lyrata subsp. lyrata] gi|297833792|ref|XP_002884778.1|
hypothetical protein ARALYDRAFT_478337 [Arabidopsis
lyrata subsp. lyrata] gi|297838067|ref|XP_002886915.1|
hypothetical protein ARALYDRAFT_894090 [Arabidopsis
lyrata subsp. lyrata]
gi|75313795|sp|Q9SR73.1|RS281_ARATH RecName: Full=40S
ribosomal protein S28-1
gi|6143868|gb|AAF04415.1|AC010927_8 putative ribosomal
protein S28 [Arabidopsis thaliana]
gi|7406395|emb|CAB85505.1| RIBOSOMAL PROTEIN S28-like
[Arabidopsis thaliana] gi|9758014|dbj|BAB08611.1|
ribosomal protein S28 [Arabidopsis thaliana]
gi|22136042|gb|AAM91603.1| ribosomal protein S28-like
protein [Arabidopsis thaliana]
gi|23197756|gb|AAN15405.1| ribosomal protein S28-like
protein [Arabidopsis thaliana]
gi|38566518|gb|AAR24149.1| At3g10090 [Arabidopsis
thaliana] gi|40823561|gb|AAR92289.1| At3g10090
[Arabidopsis thaliana] gi|106879139|gb|ABF82599.1|
At5g03850 [Arabidopsis thaliana]
gi|297312433|gb|EFH42857.1| hypothetical protein
ARALYDRAFT_919718 [Arabidopsis lyrata subsp. lyrata]
gi|297318955|gb|EFH49377.1| hypothetical protein
ARALYDRAFT_325035 [Arabidopsis lyrata subsp. lyrata]
gi|297330618|gb|EFH61037.1| hypothetical protein
ARALYDRAFT_478337 [Arabidopsis lyrata subsp. lyrata]
gi|297332756|gb|EFH63174.1| hypothetical protein
ARALYDRAFT_894090 [Arabidopsis lyrata subsp. lyrata]
gi|332003279|gb|AED90662.1| 40S ribosomal protein S28-1
[Arabidopsis thaliana] gi|332641337|gb|AEE74858.1| 40S
ribosomal protein S28-1 [Arabidopsis thaliana]
Length = 64
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>ref|NP_201219.1| 40S ribosomal protein S28-2 [Arabidopsis thaliana]
gi|464720|sp|P34789.1|RS282_ARATH RecName: Full=40S
ribosomal protein S28-2 gi|409184|gb|AAA32862.1|
ribosomal protein S28 [Arabidopsis thaliana]
gi|10176962|dbj|BAB10282.1| 40S ribosomal protein S28
[Arabidopsis thaliana] gi|16648979|gb|AAL24341.1| 40S
ribosomal protein S28 [Arabidopsis thaliana]
gi|20148701|gb|AAM10241.1| 40S ribosomal protein S28
[Arabidopsis thaliana] gi|21593139|gb|AAM65088.1| 40S
ribosomal protein S28 [Arabidopsis thaliana]
gi|332010463|gb|AED97846.1| 40S ribosomal protein S28-2
[Arabidopsis thaliana]
Length = 64
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
ribosomal protein S28, putative [Ricinus communis]
gi|223539919|gb|EEF41497.1| ribosomal protein S28,
putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
40S ribosomal protein S28A [Hevea brasiliensis]
gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
[Hevea brasiliensis]
Length = 65
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>gb|ABY77634.1| At5g03850 [Arabidopsis thaliana] gi|166007603|gb|ABY77635.1|
At5g03850 [Arabidopsis thaliana]
gi|166007605|gb|ABY77636.1| At5g03850 [Arabidopsis
thaliana] gi|166007607|gb|ABY77637.1| At5g03850
[Arabidopsis thaliana] gi|166007609|gb|ABY77638.1|
At5g03850 [Arabidopsis thaliana]
gi|166007611|gb|ABY77639.1| At5g03850 [Arabidopsis
thaliana] gi|166007613|gb|ABY77640.1| At5g03850
[Arabidopsis thaliana] gi|166007615|gb|ABY77641.1|
At5g03850 [Arabidopsis thaliana]
gi|166007617|gb|ABY77642.1| At5g03850 [Arabidopsis
thaliana] gi|166007619|gb|ABY77643.1| At5g03850
[Arabidopsis thaliana] gi|166007621|gb|ABY77644.1|
At5g03850 [Arabidopsis thaliana]
gi|166007623|gb|ABY77645.1| At5g03850 [Arabidopsis
thaliana] gi|166007625|gb|ABY77646.1| At5g03850
[Arabidopsis thaliana] gi|166007627|gb|ABY77647.1|
At5g03850 [Arabidopsis thaliana]
gi|166007629|gb|ABY77648.1| At5g03850 [Arabidopsis
thaliana] gi|166007631|gb|ABY77649.1| At5g03850
[Arabidopsis thaliana] gi|166007633|gb|ABY77650.1|
At5g03850 [Arabidopsis thaliana]
gi|166007635|gb|ABY77651.1| At5g03850 [Arabidopsis
thaliana] gi|166007637|gb|ABY77652.1| At5g03850
[Arabidopsis thaliana] gi|166007639|gb|ABY77653.1|
At5g03850 [Arabidopsis thaliana]
gi|166007641|gb|ABY77654.1| At5g03850 [Arabidopsis
thaliana] gi|166007643|gb|ABY77655.1| At5g03850
[Arabidopsis thaliana] gi|166007645|gb|ABY77656.1|
At5g03850-like protein [Arabidopsis lyrata]
Length = 52
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocarpa]
gi|224110082|ref|XP_002315409.1| 40S ribosomal protein
S28 [Populus trichocarpa] gi|118481584|gb|ABK92734.1|
unknown [Populus trichocarpa]
gi|118481768|gb|ABK92823.1| unknown [Populus
trichocarpa] gi|118482102|gb|ABK92982.1| unknown
[Populus trichocarpa] gi|118482699|gb|ABK93268.1|
unknown [Populus trichocarpa]
gi|222851745|gb|EEE89292.1| 40S ribosomal protein S28
[Populus trichocarpa] gi|222864449|gb|EEF01580.1| 40S
ribosomal protein S28 [Populus trichocarpa]
Length = 65
Score = 60.5 bits (145), Expect = 5e-07
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+VVK+MGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVVKIMGRTGSRGQVTQVRVKF 30
>gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus vulgaris]
Length = 65
Score = 60.1 bits (144), Expect = 6e-07
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQ+KHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQVKHALVVKVMGRTGSRGQVTQVRVKF 30
>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
Length = 65
Score = 59.7 bits (143), Expect = 8e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
M+SQIKHAIVVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
Length = 68
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 4 MESQIKHAVVVKVMGRTGSRGQVTQVRVKF 33
>ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440917|ref|XP_004138230.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440919|ref|XP_004138231.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440921|ref|XP_004138232.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463340|ref|XP_004149392.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463342|ref|XP_004149393.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477091|ref|XP_004154926.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477094|ref|XP_004154927.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477096|ref|XP_004154928.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477100|ref|XP_004154929.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503792|ref|XP_004162179.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503794|ref|XP_004162180.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503796|ref|XP_004162181.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
Length = 65
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MESQIKHAVVVKVMGRTGSRGQVTQVRVKF 30
>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
[Medicago truncatula]
Length = 75
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 11 MESQIKHAVVVKVMGRTGSRGQVTQVRVKF 40
>ref|XP_002322747.1| hypothetical protein POPTR_0016s06300g [Populus trichocarpa]
gi|118481467|gb|ABK92676.1| unknown [Populus
trichocarpa] gi|118485130|gb|ABK94428.1| unknown
[Populus trichocarpa] gi|222867377|gb|EEF04508.1|
hypothetical protein POPTR_0016s06300g [Populus
trichocarpa]
Length = 65
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
MDSQIKHA+V+K+MGRTGSRGQVTQVRVKF
Sbjct: 1 MDSQIKHAVVMKIMGRTGSRGQVTQVRVKF 30
>ref|XP_004489433.1| PREDICTED: 40S ribosomal protein S28-like [Cicer arietinum]
gi|124359133|gb|ABD32492.2| Ribosomal protein S28e
[Medicago truncatula] gi|388522463|gb|AFK49293.1|
unknown [Medicago truncatula]
Length = 65
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 87 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKF 176
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF
Sbjct: 1 MESQIKHAVVVKVMGRTGSRGQVTQVRVKF 30