BLASTX nr result
ID: Catharanthus22_contig00001970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00001970
(2426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p... 777 0.0
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 776 0.0
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 774 0.0
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 772 0.0
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 769 0.0
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 758 0.0
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 755 0.0
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 748 0.0
gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus pe... 725 0.0
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 723 0.0
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr... 722 0.0
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 714 0.0
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 706 0.0
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 704 0.0
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 703 0.0
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 702 0.0
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 702 0.0
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 678 0.0
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi... 676 0.0
ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containi... 669 0.0
>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 586
Score = 777 bits (2007), Expect = 0.0
Identities = 379/586 (64%), Positives = 483/586 (82%), Gaps = 9/586 (1%)
Frame = +3
Query: 171 TILSAEFFPQPLPCTNSS-KP--NSQSTNKSLVRCRNER------KSRSPQRVKVCTENR 323
T+ S E LP T KP NS S + SLV C N KSR+ Q+V+V E R
Sbjct: 2 TLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETR 61
Query: 324 STQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSS 503
T L S D E + +KLLNRSCKAGK++EA YFLE MV +G +KPDV+LCTK+IKG F+
Sbjct: 62 PTHLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKG-YKPDVVLCTKMIKGFFNG 120
Query: 504 KQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYN 683
+ +EKA RV++ILE YGEPDVFAYNA+ISGFCK N++D AN++L+RMR+RG SPD+VTYN
Sbjct: 121 RNVEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYN 180
Query: 684 IMIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSK 863
IMIGS C+RGKL A KV ++LL+DNCKP+V+TYTILIEAT+L+G I +AMKLLDEMLSK
Sbjct: 181 IMIGSFCSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSK 240
Query: 864 GLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDG 1043
GL+PDM+TYN IIRG+C++GM++RA++F+ SL +G +PDVISYNILLR LL++GKW +G
Sbjct: 241 GLRPDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEG 300
Query: 1044 KKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISA 1223
+KLV EM+S G EPNVVTYSIL+++LCR+GKLEEAVN+LK+M ++GLTPD ++Y+P+ISA
Sbjct: 301 EKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISA 360
Query: 1224 FCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPD 1403
FC+EG++DLAI FLD MIS GCLPDIVNYNT+L+ +CKNGKA+QALE+F+KL E+GCPP+
Sbjct: 361 FCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPN 420
Query: 1404 VSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLK 1583
VS+YN M SALW++G++ KAL +SEM++K + PDEIT+NSLISCLCRDGMVDEAIELL
Sbjct: 421 VSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLV 480
Query: 1584 DMERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAG 1763
DM SG P TVI+YN VLLGLCK HRI+DAIE+L MV K C+PNETTY+LL+EGIGFAG
Sbjct: 481 DMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAG 540
Query: 1764 WRAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTETSK 1901
WR+EAM+ A++L + IS++SF+RL RTFP LDV K+ A ++++K
Sbjct: 541 WRSEAMELANALFRMEAISKDSFKRLNRTFPLLDVYKEFAGSDSNK 586
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 776 bits (2004), Expect = 0.0
Identities = 380/582 (65%), Positives = 481/582 (82%), Gaps = 5/582 (0%)
Frame = +3
Query: 171 TILSAEFFPQPLPCTNSSKPNSQSTNKSLVRCRNER-----KSRSPQRVKVCTENRSTQL 335
TI S +FFP+ P KP S S + S+V CRN SR+ +V V E R L
Sbjct: 2 TIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61
Query: 336 QSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQME 515
QS D E + +KLLNRSCKAGKF+E+LYFLE +VN+G + PDVILCTKLIKG F+ K +E
Sbjct: 62 QSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLIKGFFNFKNIE 120
Query: 516 KALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIG 695
KA RV++ILE + EPDVFAYNAVISGFCK N+I++A ++LNRM+ARG PDIVTYNIMIG
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180
Query: 696 SLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQP 875
SLCNR KLGLA KV D+LL DNC PTV+TYTILIEATI+EGGI +AMKLL+EML++GL P
Sbjct: 181 SLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240
Query: 876 DMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKLV 1055
DMYTYN IIRG+C+EGM++RA E I+SL KG KPDVISYNILLR+ L++GKW +G+KLV
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300
Query: 1056 AEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCRE 1235
AEM S G EPN VTYSIL+++LCR G+++EA+++LK+M++K LTPDT++Y+P+ISA C+E
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 1236 GKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTY 1415
G++DLAI +DYMIS+GCLPDIVNYNTIL+A+CKNG A+QALE+F+KL +GCPP+VS+Y
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 1416 NAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMER 1595
N M+SALW+ G+R++AL + M++KG+DPDEIT+NSLISCLCRDG+V+EAI LL DME+
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480
Query: 1596 SGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAE 1775
SGF TVI+YN VLLGLCK RIDDAI + EM++KGCRPNETTY+LL+EGIGFAGWR E
Sbjct: 481 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTE 540
Query: 1776 AMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTETSK 1901
AM+ A+SL ++VIS++SF+RL +TFP LDV K+++ +ET K
Sbjct: 541 AMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSNSETKK 582
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 774 bits (1999), Expect = 0.0
Identities = 379/584 (64%), Positives = 481/584 (82%), Gaps = 5/584 (0%)
Frame = +3
Query: 165 MTTILSAEFFPQPLPCTNSSKPNSQSTNKSLVRCRNER-----KSRSPQRVKVCTENRST 329
+ TI S +FFP P + KP S S + S+V CRN SR+ +V V E R
Sbjct: 10 LMTIYSTDFFPHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPA 69
Query: 330 QLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQ 509
LQS D E + +KLLNRSCKAGKF+E+LYFLE +VN+G + PDVILCTKLIKG F+ K
Sbjct: 70 HLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLIKGFFNFKN 128
Query: 510 MEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIM 689
+EKA RV++ILE + EPDVFAYNAVISGFCK NQI++A ++LNRM+ARG PDIVTYNIM
Sbjct: 129 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIM 188
Query: 690 IGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGL 869
IGSLCNR KLGLA V D+LL DNC PTV+TYTILIEATI+EGGI +AMKLL+EML++GL
Sbjct: 189 IGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGL 248
Query: 870 QPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKK 1049
PDMYTYN IIRG+C+EGM++RA E I+SL KG +PDVISYNILLR+ L++GKW +G+K
Sbjct: 249 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEK 308
Query: 1050 LVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFC 1229
LVAEM S G EPN VTYSIL+++LCR G+++EA+++LK+M++K LTPDT++Y+P+ISA C
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 368
Query: 1230 REGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVS 1409
+EG++DLAI +DYMIS+GCLPDIVNYNTIL+A+CKNG A+QALE+F+KL +GCPP+VS
Sbjct: 369 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 428
Query: 1410 TYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDM 1589
+YN M+SALW+ G+R++AL + M++KG+DPDEIT+NSLISCLCRDG+V+EAI LL DM
Sbjct: 429 SYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDM 488
Query: 1590 ERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWR 1769
E+SGF TVI+YN VLLGLCK RIDDAI + EM++KGCRPNETTY+LL+EGIGFAGWR
Sbjct: 489 EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWR 548
Query: 1770 AEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTETSK 1901
EAM+ A+SL ++VIS++SF+RL +TFP LDV K+++ +ET K
Sbjct: 549 TEAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSNSETKK 592
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 772 bits (1993), Expect = 0.0
Identities = 371/582 (63%), Positives = 470/582 (80%), Gaps = 9/582 (1%)
Frame = +3
Query: 174 ILSAEFFPQPLPCTNSSKPNSQSTNKSLVRCR---------NERKSRSPQRVKVCTENRS 326
I+S E P T+ KP S S + + + CR SR+P RV V E +S
Sbjct: 3 IVSTELLPHSFHTTSQLKPTSHSHHPTALSCRASSASSISNGRNSSRNPTRVSVSAEPKS 62
Query: 327 TQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSK 506
TQLQ+ D + + +K+LNRSCKAG+++EA+YFLE MVN+G +KPDVILCTKLIKG F+S+
Sbjct: 63 TQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKG-YKPDVILCTKLIKGFFNSR 121
Query: 507 QMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNI 686
+EKA+RV++ILE YGEPD+FAYNA+ISGFCK N+I+SAN++L+RM+++G PD+VTYNI
Sbjct: 122 NIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNI 181
Query: 687 MIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKG 866
MIGSLC+RGKLGLA +V D L+ DNCKPTV+TYTILIEA IL+GGI +AMKLLDEMLS+G
Sbjct: 182 MIGSLCSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRG 241
Query: 867 LQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGK 1046
L+PDMYTYN I+RG+CREGM+DRA+EF+ KG P+VISYNILLR+LL+ GKW +G+
Sbjct: 242 LKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGE 301
Query: 1047 KLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAF 1226
LVA M + G EPNVVTYSIL++ LCRDGK+E+ +N+LK+M +KGLTPD ++Y+P+IS F
Sbjct: 302 NLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCF 361
Query: 1227 CREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDV 1406
C+EG++DLAI LD MIS GCLPDIVNYNT+L+A+CKNG ADQALE+F+ L E+GCPP+V
Sbjct: 362 CKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNV 421
Query: 1407 STYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKD 1586
S+YN M SALWN G+R +AL +S+M++KG++PDEIT+NSLISCLCRDGMV+EAI LL D
Sbjct: 422 SSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVD 481
Query: 1587 MERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGW 1766
ME GF TVITYN VLLGL KA RI DAIE+ MV+KGCRPNETTY+LL+EGIGFAGW
Sbjct: 482 MEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILLIEGIGFAGW 541
Query: 1767 RAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTE 1892
RAEAM+ A S+ + I +SF+RL RTFP LDV K++ +E
Sbjct: 542 RAEAMELAKSVYSLSAICEDSFKRLSRTFPMLDVYKELTLSE 583
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 770 bits (1987), Expect = 0.0
Identities = 390/583 (66%), Positives = 481/583 (82%), Gaps = 11/583 (1%)
Frame = +3
Query: 165 MTTILSAEFFPQPLPCTNSSKPNSQSTNKS-LVRC------RNERKSRSPQRVKVCTEN- 320
MT I+ AE FPQ +N+ KP SQS+ + +VRC +++ K+R+P RVK+ +EN
Sbjct: 1 MTRIIPAEIFPQCPFFSNNLKPKSQSSKHNFVVRCSSSSNDQSKVKTRNPLRVKISSENY 60
Query: 321 RSTQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFS 500
R T + +K+LN SCK GK+ E LY LE + G +KPDVILCTKLIKG +
Sbjct: 61 RPT----------HDMKVLNWSCKVGKYDETLYLLECKLKSG-YKPDVILCTKLIKGFCN 109
Query: 501 SKQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTY 680
SK +K ++V++ILE +GEPDVFAYNA+ISGFCK N+I+ AN++LNRM+ARG PD VTY
Sbjct: 110 SKNSDKGVKVMQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTY 169
Query: 681 NIMIGSLCNRGKLGLAQKVFDELLEDN-CKPTVVTYTILIEATILEGGIRKAMKLLDEML 857
NI+IGSLC+RGKLG A K+ D+L E+N CKPTV+TYTILIEATILEGGI +AMKLLDEML
Sbjct: 170 NILIGSLCDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEML 229
Query: 858 SKGLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLS-EGKW 1034
S+GLQPDMYTYN IIRG+CRE MMD+AYEF+ SLP KG KPDVISYNILLR+LL +GKW
Sbjct: 230 SRGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKW 289
Query: 1035 RDGKKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPV 1214
DG+KL+ EMLS G EPNVVTYSIL++ALCRDGKL+EA+NLLK+MMDKGLTPDTFTY+P+
Sbjct: 290 SDGEKLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPL 349
Query: 1215 ISAFCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGC 1394
ISAFC+ G++DLAI FLDYMIS+GCLPDIVNYNTILS MCK GKAD+A+EVF+KL E+GC
Sbjct: 350 ISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGC 409
Query: 1395 PPDVSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIE 1574
PPDVSTYN ++SALWNNG R +AL +SEM+ KG+DPDEIT+N+LISCLCRDGMV+EA++
Sbjct: 410 PPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALD 469
Query: 1575 LLKDMERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIG 1754
LL DME +GFP TVITYN +LLGLCKAHR+ +AIE+L EMV+KG RPNETTY+LL+EGIG
Sbjct: 470 LLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIG 529
Query: 1755 FAGWRAEAMKAASSLLKKNVISRESFRRLKRTFPALDV-TKDV 1880
F+G R +AM+ AS++ KN IS+ES +RL++TF DV KD+
Sbjct: 530 FSGRRVQAMEMASAIYHKNAISKESLQRLRKTFQVPDVYNKDI 572
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 758 bits (1957), Expect = 0.0
Identities = 365/583 (62%), Positives = 473/583 (81%), Gaps = 10/583 (1%)
Frame = +3
Query: 174 ILSAEFFPQPLPCTNSSKPNSQSTNKSLVRCRN---------ERKSRSPQRVKVCTENRS 326
I+S EF PQ LP + K ++ + + + CRN +K++ P RV+V E +S
Sbjct: 3 IISTEFLPQTLPFSPQPKQHTSRQSHTCLSCRNPSQSSTDIYRKKNKKPLRVRVSVETKS 62
Query: 327 TQLQSN-DSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSS 503
QSN D +E + +K++NRSCK+GK++EALYFLE MV++G KPDVILCTK+++G F+S
Sbjct: 63 PNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKG-FKPDVILCTKVMRGFFNS 121
Query: 504 KQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYN 683
+ + KA+RV++ILE +GEPD+F+YNA+ISGFCK N+++ AN++L+RMR +G SPD +TYN
Sbjct: 122 RNIPKAIRVMEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYN 181
Query: 684 IMIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSK 863
IMIGSLC+RGK+ +A KV DELL DNCKP+V+TYTILIEATI EGG+ KAM++L+EMLS+
Sbjct: 182 IMIGSLCSRGKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSR 241
Query: 864 GLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDG 1043
GL PDM+TYN I+RG+CREGM+DRA+EF+ SL KG P+VISYNILLR+LL+ GKW DG
Sbjct: 242 GLLPDMFTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDG 301
Query: 1044 KKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISA 1223
+K++++M+S G EPNVVTYSIL++ LCRDGK+E+AVN+LK M +KG+TPD ++Y+P+ISA
Sbjct: 302 EKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISA 361
Query: 1224 FCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPD 1403
FC+EG++DLAI F+DYMIS G LPDIVNYNTIL+A+CKNG AD ALE+F+KL E+GCPP
Sbjct: 362 FCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPT 421
Query: 1404 VSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLK 1583
VS+YN M SALWN GER KAL +SEM++K ++PDEIT+NSLISCLCR+GMV+EAI LL
Sbjct: 422 VSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLI 481
Query: 1584 DMERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAG 1763
DME GF +VI+YN VLLGLCKA RIDDAIE+L MV+KGCRPNETTY LL+EGIGFAG
Sbjct: 482 DMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLLIEGIGFAG 541
Query: 1764 WRAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTE 1892
WR EAM A+ L IS SF+RL +TFP LDV K++ +E
Sbjct: 542 WRVEAMGLANLLFDIEAISEHSFKRLNKTFPMLDVYKELTLSE 584
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 755 bits (1950), Expect = 0.0
Identities = 378/565 (66%), Positives = 468/565 (82%), Gaps = 9/565 (1%)
Frame = +3
Query: 213 TNSSKPNSQSTNKS-LVRCR--NERKS---RSPQRVKVCTENRSTQLQSNDSAEPNFVKL 374
+N+ KP S+S+ + +VRC NE R+PQRVK+ +ENR S+D +K+
Sbjct: 14 SNNLKPKSESSKHNFVVRCSISNEESRVNIRNPQRVKISSENRG----SHD------MKV 63
Query: 375 LNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKILEVYG 554
LN SCK GK+ E LY LE V G +KPDVILCTKLIKG F+SK +K ++V++ILE +G
Sbjct: 64 LNWSCKVGKYDETLYLLECKVKSG-YKPDVILCTKLIKGFFNSKNSDKGVKVMQILEQFG 122
Query: 555 EPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLAQK 734
EPDVFAYNA++SGFCK N+I+ AN++LNRM+ G PD VTYNI+IGSLC+RGKLG A
Sbjct: 123 EPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRGKLGSALM 182
Query: 735 VFDELLED-NCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRGL 911
+ D+L E+ NCKPTV+TYTILIEATILEGGI +AMKLLDEMLS GLQPDMYTYN IIRG+
Sbjct: 183 LLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGM 242
Query: 912 CREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSE-GKWRDGKKLVAEMLSTGSEPN 1088
CRE MMD+AYEF+ SLP KG KPDVISYNILLR+LL GKW DG+KL+ EML G EPN
Sbjct: 243 CREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEPN 302
Query: 1089 VVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCREGKIDLAITFLD 1268
VVTYSIL++ALCRDGKL+EA+NLLK+M+DKGLTPDTFTY+P+ISAFC+ G++D+AI FLD
Sbjct: 303 VVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLD 362
Query: 1269 YMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTYNAMVSALWNNG 1448
YMI++GCLPDIVNYNTILS MCK GKAD+A+EVF+KL E+GCPPDVSTYN ++SALWNNG
Sbjct: 363 YMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNG 422
Query: 1449 ERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMERSGFPSTVITYN 1628
R +AL +SEM+ KG+DPDEIT+N+LISCLCRDGMV+EA++LL DME +GFP TVITYN
Sbjct: 423 GRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYN 482
Query: 1629 AVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAEAMKAASSLLKK 1808
+LLGLCKAHR+ +AIE+L EMV+KGCRPNETTY+LL+EGIGF+G R +AM+ A+++ K
Sbjct: 483 ILLLGLCKAHRVVEAIEVLAEMVEKGCRPNETTYILLIEGIGFSGRRVQAMEMATAIYHK 542
Query: 1809 NVISRESFRRLKRTFPALDV-TKDV 1880
N IS+ES +RL++TF DV +KD+
Sbjct: 543 NAISKESLQRLRKTFQVPDVYSKDI 567
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 748 bits (1931), Expect = 0.0
Identities = 359/583 (61%), Positives = 471/583 (80%), Gaps = 6/583 (1%)
Frame = +3
Query: 171 TILSAEFFPQPLPCTNSS-KPNSQSTNKSLVRC-----RNERKSRSPQRVKVCTENRSTQ 332
T+ S EF P + T KP S S + ++V C + K R+PQ+V+V E R T
Sbjct: 2 TLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTH 61
Query: 333 LQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQM 512
+ S D E + +KLLNRSC+AGK++E+LYFLE MV++G + PDVILCTKLIKG F+S+ +
Sbjct: 62 VLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKG-YTPDVILCTKLIKGFFNSRNI 120
Query: 513 EKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMI 692
KA RV++ILE YG+PDVFAYNA+ISGF K NQ+++AN +L+RM++RG PD+VTYNIMI
Sbjct: 121 GKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMI 180
Query: 693 GSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQ 872
GS C+RGKL LA ++F+ELL+DNC+PTV+TYTILIEATIL+GGI AMKLLDEMLSKGL+
Sbjct: 181 GSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE 240
Query: 873 PDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKL 1052
PD TYN IIRG+C+E M+D+A+E + SL +G KPD+I+YNILLR+LLS GKW +G+KL
Sbjct: 241 PDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKL 300
Query: 1053 VAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCR 1232
++EM+S G +PNVVT+SIL+ LCRDGK+EEAVNLL+ M +KGL PD + Y+P+I+ FCR
Sbjct: 301 ISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCR 360
Query: 1233 EGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVST 1412
EG++DLA FL+YMIS GCLPDIVNYNTI++ +C+ GKADQALEVF+KLDE+GCPP+VS+
Sbjct: 361 EGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSS 420
Query: 1413 YNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDME 1592
YN + SALW++G+R +AL + +++N+G+DPDEIT+NSLISCLCRDGMVDEAIELL DM+
Sbjct: 421 YNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ 480
Query: 1593 RSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRA 1772
+ V++YN +LLGLCK +R +DAIE+L M +KGC+PNETTY+LL+EGIGF+G RA
Sbjct: 481 SGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRA 540
Query: 1773 EAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTETSK 1901
EAM+ A+SL N IS +SF RL +TFP LDV KD+ +++ SK
Sbjct: 541 EAMELANSLHGMNAISEDSFNRLNKTFPLLDVYKDLTFSDGSK 583
>gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
Length = 489
Score = 725 bits (1871), Expect = 0.0
Identities = 340/487 (69%), Positives = 426/487 (87%)
Frame = +3
Query: 432 MVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQ 611
MVN+G +KPDVILCTKLIKG F+S+ +EKA+RV++ILE YGEPD+F+YNA+ISGFCK N+
Sbjct: 1 MVNKG-YKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYGEPDLFSYNALISGFCKANR 59
Query: 612 IDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTI 791
I+SAN++L+RMR++G SPD+VTYNIMIGSLC+RGKLGLA KV D+L++DNC+PTV+TYTI
Sbjct: 60 IESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKDNCRPTVITYTI 119
Query: 792 LIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKG 971
LIEATI++GGI +AMKLLDEMLS+GL+PDMYTYN +IRG+CREGM+DRA++F+ SL KG
Sbjct: 120 LIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSKG 179
Query: 972 WKPDVISYNILLRSLLSEGKWRDGKKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAV 1151
P+VISYNILLR+LL+ GKW +G+KLV M S G EPNVVTYSIL++ LCRDGK+E+AV
Sbjct: 180 CPPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAV 239
Query: 1152 NLLKLMMDKGLTPDTFTYEPVISAFCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAM 1331
N+LK+M KGLTPD ++Y+P++SAFC+EG++DLAI FLDYMIS GCLPDIVNYNTIL+A+
Sbjct: 240 NVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAAL 299
Query: 1332 CKNGKADQALEVFDKLDELGCPPDVSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDE 1511
CK+GKADQAL++F+ L E+GCPP+VS+YN M SALWN G+R +AL +SEM+ KG+ PDE
Sbjct: 300 CKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDE 359
Query: 1512 ITFNSLISCLCRDGMVDEAIELLKDMERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEE 1691
IT+NSLISCLCRDGMVDEAI LL DME GF TVI+YN +LLGLCK R+ DAI++L E
Sbjct: 360 ITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTE 419
Query: 1692 MVKKGCRPNETTYVLLVEGIGFAGWRAEAMKAASSLLKKNVISRESFRRLKRTFPALDVT 1871
MV+KGCRPNETTY+LL+EGIGFAGWRAEAM+ A+S+ IS +SF+RL RTFP LDV
Sbjct: 420 MVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFSLRAISEDSFKRLNRTFPMLDVF 479
Query: 1872 KDVAYTE 1892
K++ +E
Sbjct: 480 KELTLSE 486
Score = 92.0 bits (227), Expect = 1e-15
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
Frame = +3
Query: 372 LLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKIL-EV 548
L++ CK G+ A+ FL+ M++ G PD++ ++ L S + ++AL++ + L EV
Sbjct: 260 LVSAFCKEGRLDLAIEFLDYMISDGC-LPDIVNYNTILAALCKSGKADQALQIFENLGEV 318
Query: 549 YGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLA 728
P+V +YN + S A M++ M +GI PD +TYN +I LC G + A
Sbjct: 319 GCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEA 378
Query: 729 QKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRG 908
+ ++ +PTV++Y I++ + A+++L EM+ KG +P+ TY +I G
Sbjct: 379 IGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTYILLIEG 438
Query: 909 LCREGMMDRAYEFISSL 959
+ G A E +S+
Sbjct: 439 IGFAGWRAEAMELANSV 455
Score = 85.1 bits (209), Expect = 1e-13
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Frame = +3
Query: 360 NFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKI 539
N+ +L CK+GK +AL EN+ G P+V + L++ +AL ++
Sbjct: 291 NYNTILAALCKSGKADQALQIFENLGEVGC-PPNVSSYNTMFSALWNCGDRVRALGMVSE 349
Query: 540 LEVYG-EPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGK 716
+ G +PD YN++IS C+ +D A +L M G P +++YNI++ LC +
Sbjct: 350 MVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRR 409
Query: 717 LGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLS 860
+ A +V E++E C+P TY +LIE G +AM+L + + S
Sbjct: 410 VVDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFS 457
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 723 bits (1867), Expect = 0.0
Identities = 352/583 (60%), Positives = 465/583 (79%), Gaps = 6/583 (1%)
Frame = +3
Query: 165 MTTILSAEFFPQPLPCTNSS----KPN-SQSTNKSLVRCRNERKSRSPQRVKVCTENR-S 326
M I S +F P+ L S KP S S ++V C N KS RV E R +
Sbjct: 1 MALISSTDFVPRNLVIFTSQHQQLKPTTSHSVQSTVVSCINP-KSNERVRVSSSAETRPN 59
Query: 327 TQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSK 506
T L S D E F+KL+ +S +AGKF E+LYF+E+MV G KPDV++CTKLIK F +
Sbjct: 60 THLLSFDVKETQFMKLIKKSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLIKKFFQER 118
Query: 507 QMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNI 686
+ KA+RV++ILE YGEPDVFAYNA+ISGFCK NQI+ AN++L+R+R+RG SPD+VTYNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 687 MIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKG 866
MIGSLC+RG + A KVFD+LL DNCKPTV+TYTILI+AT+LEG KAMKLLDEML++G
Sbjct: 179 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARG 238
Query: 867 LQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGK 1046
L PDM+T N IIRG+C++GM+ +A++F+ SL +G +PDVISYN+LLR+LL+ GKW +G+
Sbjct: 239 LIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 298
Query: 1047 KLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAF 1226
KL+ EM+S G EPNVVTYSIL+++LCRDGK E+AV++L+ +KGLTPD ++Y+P+ISA+
Sbjct: 299 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 358
Query: 1227 CREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDV 1406
C++G++DLAI FLDYMIS GCLPDIVNYNTIL+A CKNG ADQALE+F+KL ++GCPP+V
Sbjct: 359 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 418
Query: 1407 STYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKD 1586
S+YN M SALW++G++ +AL +SEM++KG++PDEIT+NSLISCLCRDGMVDEA+ LL D
Sbjct: 419 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 478
Query: 1587 MERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGW 1766
ME + F TVI+YN ++LG CK RI+++IE+L M +KGC+PNETTYVLL+EGIG+ GW
Sbjct: 479 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 538
Query: 1767 RAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTET 1895
RAEAM+ A++L+ + ISR++F+RL RTFP LDV K++++ T
Sbjct: 539 RAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLAT 581
>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
gi|557544927|gb|ESR55905.1| hypothetical protein
CICLE_v10019446mg [Citrus clementina]
Length = 583
Score = 722 bits (1864), Expect = 0.0
Identities = 351/583 (60%), Positives = 463/583 (79%), Gaps = 6/583 (1%)
Frame = +3
Query: 165 MTTILSAEFFPQPLPCTNSS----KPN-SQSTNKSLVRCRNERKSRSPQRVKVCTENR-S 326
M I S +F P+ L S KP S S ++V C N KS RV E R +
Sbjct: 1 MALISSTDFVPRNLVIFTSQHQQQKPTTSHSVQSTVVSCINP-KSNERVRVSSSAETRPN 59
Query: 327 TQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSK 506
T L S D E F+KL+ RS +AGKF E+LYF+E+MV G KPDV++CTKLIK F +
Sbjct: 60 THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLIKKFFQER 118
Query: 507 QMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNI 686
+ KA+RV++ILE YGEPDVFAYNA+ISGFCK NQI+ AN++L+R+R+RG SPD+VTYNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 687 MIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKG 866
MIGSLC+RG + KVFD+LL DNCKPTV+TYTILI+AT+LEG KAMKLLDEM ++G
Sbjct: 179 MIGSLCSRGMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARG 238
Query: 867 LQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGK 1046
L PDM+T N IIRG+C++GM+ +A++F+ SL +G +PDVISYN+LLR+LL+ GKW +G+
Sbjct: 239 LIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 298
Query: 1047 KLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAF 1226
KL+ EM+S G EPNVVTYSIL+++LCRDGK E+AV++L+ +KGLTPD ++Y+P+ISA+
Sbjct: 299 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 358
Query: 1227 CREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDV 1406
C++G++DLAI FLDYMIS GCLPDIVNYNTIL+A CKNG ADQALE+F+KL ++GCPP+V
Sbjct: 359 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 418
Query: 1407 STYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKD 1586
S+YN M SALW++G++ +AL +SEM++KG++PDEIT+NSLISCLCRDGMVDEA+ LL D
Sbjct: 419 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 478
Query: 1587 MERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGW 1766
ME + F TV++YN ++LG CK RI++AIE+L M +KGC+PNETTYVLL+EGIG+ GW
Sbjct: 479 MESTRFRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 538
Query: 1767 RAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTET 1895
RAEAM+ A++L+ + ISR++F+RL RTFP LDV K++++ T
Sbjct: 539 RAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLAT 581
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 714 bits (1842), Expect = 0.0
Identities = 346/581 (59%), Positives = 466/581 (80%), Gaps = 2/581 (0%)
Frame = +3
Query: 174 ILSAEFFPQPLPCTNS-SKPN-SQSTNKSLVRCRNERKSRSPQRVKVCTENRSTQLQSND 347
+ S+EF PQ L TN +KP QS + S+ CR K+ + V E R + D
Sbjct: 1 MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHL-RNVTSSAEFRQPHFPNLD 59
Query: 348 SAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALR 527
+ + + +KLLNRSC+AGK +E+LYFLE++V++G KPDV+LCTKLIKG F+S+ ++KA+R
Sbjct: 60 NRDAHLMKLLNRSCRAGKHNESLYFLESVVSKG-FKPDVVLCTKLIKGFFNSRNLKKAMR 118
Query: 528 VLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCN 707
V++ILE YG+PDV++YNA+ISGF K NQIDSAN++ +RMR+RG SPD+VTYNIMIGSLC+
Sbjct: 119 VMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCS 178
Query: 708 RGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYT 887
RGKL LA +V DELL+D CKP+V+TYTILIEATILEG I +A++L DE++S+GL+PD+YT
Sbjct: 179 RGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYT 238
Query: 888 YNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKLVAEML 1067
YN IIRG+C+EGM DRA +F+ L +G PDV+SYNILLRS L++ +W DG++L+ +M+
Sbjct: 239 YNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMV 298
Query: 1068 STGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCREGKID 1247
+G EPNVVT+SIL+++ CR+G++ EAVN+L++M +KGLTPD+++Y+P+ISAFC+EG++D
Sbjct: 299 LSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLD 358
Query: 1248 LAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTYNAMV 1427
LAI +L+ M+S GCLPDIVNYNTIL+ +CK G AD AL+VF+KLDE+GCPP V YN M
Sbjct: 359 LAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMF 418
Query: 1428 SALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMERSGFP 1607
SALW+ G + KAL +SEM+ KG+DPDEIT+NSLISCLCRDG+VDEAI LL DME + F
Sbjct: 419 SALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQ 478
Query: 1608 STVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAEAMKA 1787
TVI++N VLLG+CKAHR+ + IE+L MV+KGC PNET+YVLL+EGI +AGWRAEAM+
Sbjct: 479 PTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538
Query: 1788 ASSLLKKNVISRESFRRLKRTFPALDVTKDVAYTETSK*LI 1910
A+SL + VIS +S +RL +TFP LDV K ++ +E+ L+
Sbjct: 539 ANSLYRLGVISGDSSKRLNKTFPMLDVYKGLSLSESKNQLL 579
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 706 bits (1822), Expect = 0.0
Identities = 347/581 (59%), Positives = 456/581 (78%), Gaps = 11/581 (1%)
Frame = +3
Query: 171 TILSAEFFPQP--LPCTNSS-KPNSQSTNKSLVRC-------RNERKSRSPQRVKVCTEN 320
T+ S EF P T+ K + S ++V C N P+ +V E
Sbjct: 2 TMFSTEFISHSCSFPFTSKHFKLSLHSLQSNVVSCINPTHNDTNSNLGNPPKLRRVLPET 61
Query: 321 RSTQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFS 500
+ T + S D E + +KLLNRSCKAGK +E+LYFLE MV +G ++PDVI+CTKLIKG F+
Sbjct: 62 KPTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKG-YQPDVIMCTKLIKGFFN 120
Query: 501 SKQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTY 680
S+ +EKA RV++ILE +GEPDVFAYNAVISGFCK N+I+SA ++L+RM+ +G S D+VTY
Sbjct: 121 SRNIEKATRVMEILEKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTY 180
Query: 681 NIMIGSLCNRGKLGLAQKVFDELLEDN-CKPTVVTYTILIEATILEGGIRKAMKLLDEML 857
NIMIG+ C++GK+ LA KVF+ELL+DN CKPT++TYTILIEA ILEGGI + +KLLDEML
Sbjct: 181 NIMIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEML 240
Query: 858 SKGLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWR 1037
S+GL+PD +TYN I+RGL +EG +++A+E + +L +G KPDVI+YNILLR+LL +GKW
Sbjct: 241 SRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWY 300
Query: 1038 DGKKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVI 1217
+G+KL+ EM S G EPNVVTYSIL+++LCRDGK+EE+VNL+K+M +KGLTPD + Y+P+I
Sbjct: 301 EGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 360
Query: 1218 SAFCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCP 1397
+AFCREGK+D+AI FLDYMIS G LPDIVNYNTI++A+CKNG +D A+E+F KL+E+GCP
Sbjct: 361 AAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCP 420
Query: 1398 PDVSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIEL 1577
P+VS+YN M+SALW +G+R +AL +S+M++ G+DPD IT+NSLISCLCRDGMVDEAI L
Sbjct: 421 PNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGL 480
Query: 1578 LKDMERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGF 1757
L DM F +++YN VLLGLCK HRIDDAIE+L M++ GC+PNETTY LL+EGIGF
Sbjct: 481 LADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGF 540
Query: 1758 AGWRAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDV 1880
+G RA+AM+ A+SL N IS S++RL + FP LDV KD+
Sbjct: 541 SGSRAQAMELANSLYSMNAISEGSYKRLNKVFPLLDVYKDL 581
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 704 bits (1816), Expect = 0.0
Identities = 337/554 (60%), Positives = 448/554 (80%), Gaps = 3/554 (0%)
Frame = +3
Query: 216 NSSKPNSQSTNK-SLVRCRNERKSRSPQRVKVCTENRSTQLQSNDSA--EPNFVKLLNRS 386
++S PN + S ++ + Q V TE R Q S+ + +K+ +RS
Sbjct: 44 SNSNPNHDNVKSFSSSGAARNLQAATTQDATVPTERRQHQTHSHSLGFRDTQMLKIFHRS 103
Query: 387 CKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKILEVYGEPDV 566
C++G + E+L+ LE+MV +G + PDVILCTKLIKG F+ + + KA+RV++ILE +G+PDV
Sbjct: 104 CRSGNYIESLHLLESMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDV 162
Query: 567 FAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLAQKVFDE 746
FAYNA+I+GFCK N+ID A +L+RMR++G SPD VTYNIMIGSLC+RGKL LA KV D+
Sbjct: 163 FAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQ 222
Query: 747 LLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRGLCREGM 926
LL DNC+PTV+TYTILIEAT+LEGG+ +A+KLLDEMLS+GL+PDM+TYNTIIRG+C+EGM
Sbjct: 223 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 282
Query: 927 MDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKLVAEMLSTGSEPNVVTYSI 1106
+DRA+E + +L +G +PDVISYNILLR+LL++GKW +G+KL+ +M S +PNVVTYSI
Sbjct: 283 VDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 342
Query: 1107 LVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCREGKIDLAITFLDYMISSG 1286
L+T LCRDGK+EEA+NLLKLM +KGL+PD ++Y+P+I+AFCREG++DLAI FL+ MIS G
Sbjct: 343 LITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDG 402
Query: 1287 CLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTYNAMVSALWNNGERTKAL 1466
CLPDIVNYNT+L+ +CKNGKADQALE+F KL E+GC P+ S+YN M SALW++G++ +AL
Sbjct: 403 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 462
Query: 1467 IKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMERSGFPSTVITYNAVLLGL 1646
+SEM+++G+DPDEIT+NS+ISCLCR+GMVDEA +LL DM F +V+TYN VLLG
Sbjct: 463 HMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGF 522
Query: 1647 CKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAEAMKAASSLLKKNVISRE 1826
CKAHRI+DAI++LE MV GCRPNE+TY +L+EGIGFAG+RAEAM+ A+ L++ + IS
Sbjct: 523 CKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEH 582
Query: 1827 SFRRLKRTFPALDV 1868
SF+RL RTFP L+V
Sbjct: 583 SFKRLHRTFPLLNV 596
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 703 bits (1814), Expect = 0.0
Identities = 338/558 (60%), Positives = 444/558 (79%)
Frame = +3
Query: 216 NSSKPNSQSTNKSLVRCRNERKSRSPQRVKVCTENRSTQLQSNDSAEPNFVKLLNRSCKA 395
++S PN + KS + + TE R QS + +K+ +RSC++
Sbjct: 40 SNSNPNHDN-GKSFSSSGARNLQATTTDAAIPTERRQQHSQSLGFRDTQMLKIFHRSCRS 98
Query: 396 GKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKILEVYGEPDVFAY 575
G + E+L+ LE MV +G + PDVILCTKLIKG F+ + + KA+RV++ILE +G+PDVFAY
Sbjct: 99 GNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAY 157
Query: 576 NAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLAQKVFDELLE 755
NA+I+GFCK N+ID A +L+RMR++ SPD VTYNIMIGSLC+RGKL LA KV D+LL
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217
Query: 756 DNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRGLCREGMMDR 935
DNC+PTV+TYTILIEAT+LEGG+ +A+KLLDEMLS+GL+PDM+TYNTIIRG+C+EGM+DR
Sbjct: 218 DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277
Query: 936 AYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKLVAEMLSTGSEPNVVTYSILVT 1115
A+E I +L KG +PDVISYNILLR+LL++GKW +G+KL+ +M S +PNVVTYSIL+T
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 337
Query: 1116 ALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCREGKIDLAITFLDYMISSGCLP 1295
LCRDGK+EEA+NLLKLM +KGLTPD ++Y+P+I+AFCREG++D+AI FL+ MIS GCLP
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 397
Query: 1296 DIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTYNAMVSALWNNGERTKALIKL 1475
DIVNYNT+L+ +CKNGKADQALE+F KL E+GC P+ S+YN M SALW++G++ +AL +
Sbjct: 398 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 457
Query: 1476 SEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMERSGFPSTVITYNAVLLGLCKA 1655
EM++ G+DPDEIT+NS+ISCLCR+GMVD+A ELL DM F +V+TYN VLLG CKA
Sbjct: 458 LEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 517
Query: 1656 HRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAEAMKAASSLLKKNVISRESFR 1835
HRI+DAI++L+ MV GCRPNETTY +L+EGIGFAG+RAEAM+ A+ L++ N IS SF+
Sbjct: 518 HRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFK 577
Query: 1836 RLKRTFPALDVTKDVAYT 1889
RL RTFP L+V + + T
Sbjct: 578 RLHRTFPLLNVLQRSSQT 595
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 702 bits (1813), Expect = 0.0
Identities = 339/562 (60%), Positives = 447/562 (79%)
Frame = +3
Query: 204 LPCTNSSKPNSQSTNKSLVRCRNERKSRSPQRVKVCTENRSTQLQSNDSAEPNFVKLLNR 383
L +NS+ N + S RN + + + + TE R QS + +K+ +R
Sbjct: 40 LTFSNSNPNNDNGRSFSSSGARNLQTTTTTDAT-LPTERRQQHSQSLGFRDTQMLKIFHR 98
Query: 384 SCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKILEVYGEPD 563
SC++G + E+L+ LE MV +G + PDVILCTKLIKG F+ + + KA+RV++ILE +G+PD
Sbjct: 99 SCRSGNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 564 VFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLAQKVFD 743
VFAYNA+I+GFCK N+ID A +L+RMR++ SPD VTYNIMIGSLC+RGKL LA KV +
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 744 ELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRGLCREG 923
+LL DNC+PTV+TYTILIEAT+LEGG+ +A+KL+DEMLS+GL+PDM+TYNTIIRG+C+EG
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 924 MMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKLVAEMLSTGSEPNVVTYS 1103
M+DRA+E + +L KG +PDVISYNILLR+LL++GKW +G+KL+ +M S +PNVVTYS
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 1104 ILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCREGKIDLAITFLDYMISS 1283
IL+T LCRDGK+EEA+NLLKLM +KGLTPD ++Y+P+I+AFCREG++D+AI FL+ MIS
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 1284 GCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTYNAMVSALWNNGERTKA 1463
GCLPDIVNYNT+L+ +CKNGKADQALE+F KL E+GC P+ S+YN M SALW++G++ +A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 1464 LIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMERSGFPSTVITYNAVLLG 1643
L + EMM+ G+DPDEIT+NS+ISCLCR+GMVDEA ELL DM F +V+TYN VLLG
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 1644 LCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAEAMKAASSLLKKNVISR 1823
CKAHRI+DAI +LE MV GCRPNETTY +L+EGIGFAG+RAEAM+ A+ L++ + IS
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Query: 1824 ESFRRLKRTFPALDVTKDVAYT 1889
SF+RL RTFP L+V + + T
Sbjct: 578 YSFKRLHRTFPLLNVLQRSSQT 599
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 702 bits (1812), Expect = 0.0
Identities = 339/562 (60%), Positives = 447/562 (79%)
Frame = +3
Query: 204 LPCTNSSKPNSQSTNKSLVRCRNERKSRSPQRVKVCTENRSTQLQSNDSAEPNFVKLLNR 383
L +NS+ N + S RN + + + + TE R QS + +K+ +R
Sbjct: 40 LTFSNSNPNNDNGRSFSSSGARNLQTTTTTDAT-LPTERRQQHSQSLGFRDTQMLKIFHR 98
Query: 384 SCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQMEKALRVLKILEVYGEPD 563
SC++G + E+L+ LE MV +G + PDVILCTKLIKG F+ + + KA+RV++ILE +G+PD
Sbjct: 99 SCRSGNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 564 VFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMIGSLCNRGKLGLAQKVFD 743
VFAYNA+I+GFCK N+ID A +L+RMR++ SPD VTYNIMIGSLC+RGKL LA KV +
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 744 ELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQPDMYTYNTIIRGLCREG 923
+LL DNC+PTV+TYTILIEAT+LEGG+ +A+KL+DEMLS+GL+PDM+TYNTIIRG+C+EG
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 924 MMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKLVAEMLSTGSEPNVVTYS 1103
M+DRA+E + +L KG +PDVISYNILLR+LL++GKW +G+KL+ +M S +PNVVTYS
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 1104 ILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCREGKIDLAITFLDYMISS 1283
IL+T LCRDGK+EEA+NLLKLM +KGLTPD ++Y+P+I+AFCREG++D+AI FL+ MIS
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 1284 GCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVSTYNAMVSALWNNGERTKA 1463
GCLPDIVNYNT+L+ +CKNGKADQALE+F KL E+GC P+ S+YN M SALW++G++ +A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 1464 LIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDMERSGFPSTVITYNAVLLG 1643
L + EMM+ G+DPDEIT+NS+ISCLCR+GMVDEA ELL DM F +V+TYN VLLG
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 1644 LCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRAEAMKAASSLLKKNVISR 1823
CKAHRI+DAI +LE MV GCRPNETTY +L+EGIGFAG+RAEAM+ A+ L++ + IS
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Query: 1824 ESFRRLKRTFPALDVTKDVAYT 1889
SF+RL RTFP L+V + + T
Sbjct: 578 YSFKRLHRTFPLLNVLQRSSQT 599
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 678 bits (1750), Expect = 0.0
Identities = 331/587 (56%), Positives = 446/587 (75%), Gaps = 16/587 (2%)
Frame = +3
Query: 171 TILSAEFFPQPLP----CTNSSKPNSQSTNKSLVRCRNERKSRSPQRVKVCTENRSTQLQ 338
T S EF L ++ SKPN+ S++ NE + + +R + N Q +
Sbjct: 2 TTFSTEFLSHTLNFRIHTSSHSKPNTIIITSSILFL-NEANNNNNKRRRRTNNNEQQQFR 60
Query: 339 SN-----------DSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLI 485
N D + NF+K LNRSCK+ K+ E+LYFL++MVNRG +KPDVILCTKLI
Sbjct: 61 VNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRG-YKPDVILCTKLI 119
Query: 486 KGLFSSKQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISP 665
KG F+ K++EKA++V++ILE +G+PDVFAYNAVISGFCK +++D A+++L+RM+ RG P
Sbjct: 120 KGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEP 179
Query: 666 DIVTYNIMIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLL 845
D+VTYNI+IG+ C RG+L LA +V D+LL+DNCKPTV+TYTILIEATI +GGI +AMKLL
Sbjct: 180 DVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLL 239
Query: 846 DEMLSKGLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSE 1025
DEMLS+GL+PD YTYN ++ G+C+EGM+DRA+EF+S + + G V +YNILLR LL+E
Sbjct: 240 DEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNE 299
Query: 1026 GKWRDGKKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTY 1205
GKW G+KL+++ML G EPN +TYS L+TALCRDGK++EA N+LK+M +K L PD ++Y
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 1206 EPVISAFCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDE 1385
+P+ISA CREGK+DLAI FLD MIS G LPDI++YN+IL+++CKNG AD+AL +F+KL E
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE 419
Query: 1386 LGCPPDVSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDE 1565
+GCPP+ +YN + ALW++G++ +AL + EM++ G+DPDEIT+NSLISCLCRDG+VD+
Sbjct: 420 VGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQ 479
Query: 1566 AIELLKDM-ERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLV 1742
AIELL DM E TVI+YN VLLGLCK RI DAIE+L MV +GC PNETTY LL+
Sbjct: 480 AIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539
Query: 1743 EGIGFAGWRAEAMKAASSLLKKNVISRESFRRLKRTFPALDVTKDVA 1883
+GIGFAGWR +AM+ A+ L+ + IS +SF+R ++ FP D K++A
Sbjct: 540 QGIGFAGWRYDAMELANLLVNMDAISEDSFKRFQKIFPVFDAHKELA 586
>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 676 bits (1745), Expect = 0.0
Identities = 333/573 (58%), Positives = 439/573 (76%), Gaps = 16/573 (2%)
Frame = +3
Query: 177 LSAEFFPQPLPCTNSSK----PNSQST------------NKSLVRCRNERKSRSPQRVKV 308
+S+EF LP +SK PN +T N S R N ++ RV
Sbjct: 4 VSSEFLSHCLPLGTNSKRAWLPNPSNTVITCRIPLLNEDNPSKRRLNNNNNNKGHTRVT- 62
Query: 309 CTENRSTQLQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIK 488
+ + Q Q D + + +K LNR CK GK++EALYFLE MV RG +KPDVILCTKLIK
Sbjct: 63 -SSDTRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRG-YKPDVILCTKLIK 120
Query: 489 GLFSSKQMEKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPD 668
GLF+SK+ EKA+RV++ILE YG+PD FAYNAVISGFC+ ++ D+AN ++ RM+ RG SPD
Sbjct: 121 GLFTSKRTEKAVRVMEILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPD 180
Query: 669 IVTYNIMIGSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLD 848
+VTYNI+IGSLC RGKL LA KV D+LLEDNC PTV+TYTILIEATI+ G I AM+LLD
Sbjct: 181 VVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLD 240
Query: 849 EMLSKGLQPDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEG 1028
EM+S+GLQPDMYTYN I+RG+C+ G++DRA+EF+S+L P + YN+LL+ LL+EG
Sbjct: 241 EMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEG 297
Query: 1029 KWRDGKKLVAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYE 1208
+W G++L+++M+ G EPN+VTYS+L+++LCRDGK EAV++L++M +KGL PD + Y+
Sbjct: 298 RWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYD 357
Query: 1209 PVISAFCREGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDEL 1388
P+ISAFC+EGK+DLAI F+D MIS+G LPDIVNYNTI+ ++CK G+AD+AL +F KL+E+
Sbjct: 358 PLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEV 417
Query: 1389 GCPPDVSTYNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEA 1568
GCPP+ S+YN M ALW++G++ +AL + EM++ G+DPD IT+NSLIS LCRDGMVDEA
Sbjct: 418 GCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEA 477
Query: 1569 IELLKDMERSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEG 1748
I LL DMER+ + TVI+YN VLLGLCKAHRI DAIE+L MV GC+PNETTY LLVEG
Sbjct: 478 IGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEG 537
Query: 1749 IGFAGWRAEAMKAASSLLKKNVISRESFRRLKR 1847
+G+AGWR+ A++ A SL+ N IS++ FRRL++
Sbjct: 538 VGYAGWRSYAVELAKSLVSMNAISQDLFRRLQK 570
>ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 561
Score = 669 bits (1726), Expect = 0.0
Identities = 331/565 (58%), Positives = 436/565 (77%), Gaps = 4/565 (0%)
Frame = +3
Query: 165 MTTILSAEFFPQPLPCTNSSK----PNSQSTNKSLVRCRNERKSRSPQRVKVCTENRSTQ 332
MTT+ S EF LP + K PN +T ++ C N R + ++ R Q
Sbjct: 1 MTTV-STEFLSHTLPFQTNLKHAWHPNPTNT---VITCSNRRLNNKGHTKVTSSDTRPHQ 56
Query: 333 LQSNDSAEPNFVKLLNRSCKAGKFSEALYFLENMVNRGSHKPDVILCTKLIKGLFSSKQM 512
D + N +K LNR CK GK +EALYFLE MV G +KPDVILCTKLIK LF+SK+
Sbjct: 57 --HYDFRDTNHIKSLNRLCKTGKCTEALYFLEQMVMNG-YKPDVILCTKLIKCLFTSKRT 113
Query: 513 EKALRVLKILEVYGEPDVFAYNAVISGFCKGNQIDSANEMLNRMRARGISPDIVTYNIMI 692
EKA+RV++ILE YGEPD FAYNAVISGFC+ ++ D+AN ++ RM+ RG SPD+VTYNI+I
Sbjct: 114 EKAVRVMEILEQYGEPDSFAYNAVISGFCRSDRFDAANGVILRMKNRGFSPDVVTYNILI 173
Query: 693 GSLCNRGKLGLAQKVFDELLEDNCKPTVVTYTILIEATILEGGIRKAMKLLDEMLSKGLQ 872
GSLC RG L LA KV D+LLEDNC PT++TYTILIEATI+ GGI +AM+LLDEM+S+GLQ
Sbjct: 174 GSLCARGNLDLALKVMDQLLEDNCNPTLITYTILIEATIIHGGIDEAMRLLDEMMSRGLQ 233
Query: 873 PDMYTYNTIIRGLCREGMMDRAYEFISSLPEKGWKPDVISYNILLRSLLSEGKWRDGKKL 1052
PD+YTYN I+RG+C+ G++DRA+EF+S+L P + YN+LL+ LL+EG+W G++L
Sbjct: 234 PDIYTYNVIVRGMCKRGLVDRAFEFVSNL---SITPSLNLYNLLLKGLLNEGRWEAGERL 290
Query: 1053 VAEMLSTGSEPNVVTYSILVTALCRDGKLEEAVNLLKLMMDKGLTPDTFTYEPVISAFCR 1232
+++M+ G EPNVVTYS+L+++LCRDGK EAV++L++M ++GL PD + Y+P+ISAFC+
Sbjct: 291 MSDMIVKGCEPNVVTYSVLISSLCRDGKAGEAVDVLRVMKERGLNPDAYCYDPLISAFCK 350
Query: 1233 EGKIDLAITFLDYMISSGCLPDIVNYNTILSAMCKNGKADQALEVFDKLDELGCPPDVST 1412
EGK+DLAI F+D MIS+G LPDIVNYNTI+ ++CK G+AD+AL +F KL+E+GCPP+ S+
Sbjct: 351 EGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASS 410
Query: 1413 YNAMVSALWNNGERTKALIKLSEMMNKGMDPDEITFNSLISCLCRDGMVDEAIELLKDME 1592
YN M ALW++G++ +AL + EM++ G+DPD IT+NSLIS LCRDGMVDEAI LL DME
Sbjct: 411 YNTMFGALWSSGDKIRALGMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDME 470
Query: 1593 RSGFPSTVITYNAVLLGLCKAHRIDDAIEILEEMVKKGCRPNETTYVLLVEGIGFAGWRA 1772
RS + TVI+YN VLLGLCKAHRI DAIE+L MV GC+PNETTY LLVEG+G+AGWR+
Sbjct: 471 RSEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRS 530
Query: 1773 EAMKAASSLLKKNVISRESFRRLKR 1847
A++ A SL+ N IS++ FRRL++
Sbjct: 531 YAVELAKSLVSMNAISQDLFRRLQK 555