BLASTX nr result
ID: Catharanthus22_contig00001927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00001927
(627 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Cath... 97 3e-18
gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding prote... 95 2e-17
dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana s... 94 2e-17
gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding prote... 92 1e-16
ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-... 92 2e-16
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 92 2e-16
sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding pr... 91 2e-16
ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago t... 91 2e-16
gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlise... 91 3e-16
sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding pr... 91 4e-16
sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding pr... 91 4e-16
ref|XP_006404621.1| hypothetical protein EUTSA_v10000386mg [Eutr... 91 4e-16
gb|AGO21482.1| glycine-rich RNA binding protein 7a [Camelina sat... 91 4e-16
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao] 91 4e-16
ref|NP_001266231.1| glycine-rich RNA-binding protein-like [Solan... 91 4e-16
ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arab... 91 4e-16
gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsu... 91 4e-16
ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [... 91 4e-16
gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Choris... 91 4e-16
dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza] 91 4e-16
>gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 97.4 bits (241), Expect = 3e-18
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRN+TVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNVTVNEAQ 85
>gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
+INDRETGRSRGFGFVTFGDEKSMKDAI GMNGQTLDGRNITVNEAQ
Sbjct: 39 VINDRETGRSRGFGFVTFGDEKSMKDAIVGMNGQTLDGRNITVNEAQ 85
>dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTFGDEKSM+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 37 IINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQ 83
>gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 92.0 bits (227), Expect = 1e-16
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DE+SM+DAIEGMNGQTLDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEQSMRDAIEGMNGQTLDGRNITVNEAQ 85
>ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-like [Citrus sinensis]
Length = 168
Score = 91.7 bits (226), Expect = 2e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSM+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 91.7 bits (226), Expect = 2e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSM+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
>sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus
carota] gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSM+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 37 IINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
>ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding
protein [Medicago truncatula]
Length = 164
Score = 91.3 bits (225), Expect = 2e-16
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSM+DAIEGMNGQ +DGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVNEAQ 85
>gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlisea aurea]
Length = 104
Score = 90.9 bits (224), Expect = 3e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DE+SMKDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQELDGRNITVNEAQ 85
>sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding
proteins in meristematic tissue [Sinapis alba]
Length = 169
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAIEGMNGQ LDGR+ITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding
proteins in meristematic tissue [Sinapis alba]
Length = 166
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAIEGMNGQ LDGR+ITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>ref|XP_006404621.1| hypothetical protein EUTSA_v10000386mg [Eutrema salsugineum]
gi|557105749|gb|ESQ46074.1| hypothetical protein
EUTSA_v10000386mg [Eutrema salsugineum]
Length = 103
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAIEGMNGQ LDGR+ITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQ 85
>gb|AGO21482.1| glycine-rich RNA binding protein 7a [Camelina sativa]
Length = 123
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAIEGMNGQ LDGR+ITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQ 85
>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
Length = 168
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEK+M+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
>ref|NP_001266231.1| glycine-rich RNA-binding protein-like [Solanum lycopersicum]
gi|421976742|gb|AFX73254.1| glycine rich RNA binding
protein 1a [Solanum lycopersicum]
Length = 164
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAI GMNGQ LDGRNITVNEAQ
Sbjct: 38 IINDRETGRSRGFGFVTFKDEKSMKDAISGMNGQELDGRNITVNEAQ 84
>ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata] gi|297326231|gb|EFH56651.1| hypothetical protein
ARALYDRAFT_481034 [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAIEGMNGQ LDGR+ITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQ 85
>gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEK+M+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
>ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 166
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF +EKSM+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
>gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF DEKSMKDAIEGMNGQ LDGR+ITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
Length = 163
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -2
Query: 626 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNITVNEAQ 486
IINDRETGRSRGFGFVTF +EKSM+DAIEGMNGQ LDGRNITVNEAQ
Sbjct: 42 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 88