BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00001806
         (3699 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   777   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   775   0.0  
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   768   0.0  
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   767   0.0  
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   752   0.0  
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   744   0.0  
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   744   0.0  
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus...   743   0.0  
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   741   0.0  
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   736   0.0  
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...   735   0.0  
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   734   0.0  
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   730   0.0  
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   714   0.0  
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   711   0.0  
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   699   0.0  
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   672   0.0  
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   669   0.0  
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]               667   0.0  
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr...   666   0.0  

>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  777 bits (2007), Expect = 0.0
 Identities = 426/646 (65%), Positives = 480/646 (74%), Gaps = 11/646 (1%)
 Frame = -2

Query: 2147 DLEKLLLEAAGRTSGNDKNRHLSPP--SRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            +L  LLLEAAGRT+   +NR   PP  S+R  K+                       K S
Sbjct: 4    ELTDLLLEAAGRTNTGGRNR---PPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLS 60

Query: 1973 SSQVPLKKRLDPAERDDD--DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMTEL 1800
             SQVPLKKRLDP ERDDD                        DLYKD+DDR+KLAQMTEL
Sbjct: 61   GSQVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTEL 120

Query: 1799 EREMILEDRATKRSDKGLHEKF-----KNRKGSPAQKNSRGVRSSTRFXXXXXXXXXALN 1635
            EREMIL DRA K+SD+ LH+K      + RK S    +SRG+RSSTR          ALN
Sbjct: 121  EREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALN 180

Query: 1634 EIRAKRLRQQ-DPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGS-PTRSGSASHSDE 1461
            EIRAKR RQQ DPE + KLRD  R+GSG RGYSP+KRR FTAA++GS PTR  S SHS+E
Sbjct: 181  EIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNE 240

Query: 1460 EDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVG 1281
             DS+ D G+ DSD++K+S ES+ PT+E+I+EI+IRRSKLAKWFMEPFF++LIVGCFVRVG
Sbjct: 241  GDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVG 300

Query: 1280 IGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSS 1101
            IG+SRSGPIYRLC+VRNVDASDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAMISDS 
Sbjct: 301  IGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSP 360

Query: 1100 PTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKSATWRP 921
            P R+E+DQWVREVERSGGRMPSKQ+VLEKKEAIQK+NTFVYSA+TVKQMLQ+KKSATWRP
Sbjct: 361  PLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRP 420

Query: 920  LNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNR 741
            LNVAAEKDRLR +ME+A+M+NDEAEVERIKARLQELE SR+ QE D KA RLAEMNRKNR
Sbjct: 421  LNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNR 480

Query: 740  VENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSKHXXXXXXXXXXXXXXXXXX 561
            VENFKNAS+L+PVN  LKAGE GYDPFSRRWTRS NY+ +K                   
Sbjct: 481  VENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYF-AKGASNGEAAAAAALAAEDNN 539

Query: 560  XXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVLQKFGGP 381
                                   GKLVDTNAPVDQGT SN LH+FDLPISLAVLQKFGG 
Sbjct: 540  GAGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGS 599

Query: 380  QGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            QG QAGFMARKQRIEATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 600  QGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  775 bits (2001), Expect = 0.0
 Identities = 424/652 (65%), Positives = 481/652 (73%), Gaps = 17/652 (2%)
 Frame = -2

Query: 2147 DLEKLLLEAAGRTSGNDKNRHLSPP--SRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            +L  LLLEAAGRT+   +NR   PP  SRR  K+                       K S
Sbjct: 4    ELTDLLLEAAGRTNTGGRNR---PPQSSRRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLS 60

Query: 1973 SSQVPLKKRLDPAERDDD--DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMTEL 1800
             SQVPLKKRLDP ERDDD                        DLYKD+DDR+KLAQMTEL
Sbjct: 61   GSQVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTEL 120

Query: 1799 EREMILEDRATKRSDKGLHEKF-----KNRKGSPAQKNSRGVRSSTRFXXXXXXXXXALN 1635
            EREMIL DRA K+SD+ LH+K      + RK S    +SRG+RSSTR          ALN
Sbjct: 121  EREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALN 180

Query: 1634 EIRAKRLRQQ-DPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGS-PTRSGSASHSDE 1461
            EIRAKR RQQ DPE + KLRD  R+GSGGRGYSP+KRR FTAAT+GS PTR  S SHS+E
Sbjct: 181  EIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNE 240

Query: 1460 EDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVG 1281
             DS+ D G+ DSD++K+S ES+ PT+E+I+EI+IRRSKLAKWFMEPFF++LIVGCFVRVG
Sbjct: 241  GDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVG 300

Query: 1280 IGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSS 1101
            IG+SRSGPIYRLC+VRNVD+SDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDS 
Sbjct: 301  IGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSP 360

Query: 1100 PTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKSATWRP 921
            P R+E+DQWVREVERSGGRMPSKQ+VLEKKEAIQK+NTFVYSA+TVKQMLQ+KKSATWRP
Sbjct: 361  PLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRP 420

Query: 920  LNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNR 741
            LNVAAEKDRLR +ME+A+M+NDEAEVERIKARLQEL+ SR+ QE D KA RLAEMNRKNR
Sbjct: 421  LNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNR 480

Query: 740  VENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYV------SKHXXXXXXXXXXXX 579
            VENFKNAS+L+PVN  LKAG+ GYDPFSRRWTRS NY+       ++             
Sbjct: 481  VENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFAKGANEEAEGASNGEVAAAAAL 540

Query: 578  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVL 399
                                         GKLVDTNAPVDQGT SN LH+FDLPISLAVL
Sbjct: 541  AAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVL 600

Query: 398  QKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            QKFGG QG QAGFMARKQRIEATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 601  QKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  768 bits (1984), Expect = 0.0
 Identities = 414/661 (62%), Positives = 477/661 (72%), Gaps = 24/661 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT  + +NR+  PPSRRRR+                        KPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDDDRXXXXXXXXXXXXXXXXXXXXD------LYKDEDDRKKLAQ 1812
             SQVPLKKRLDP ERDDD                             LYK+EDDR+KLAQ
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 1811 MTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQKNSRGVRSSTRFXXX 1662
            M+ELEREMIL +RA K+ DK L E+ ++          RK +P   +SRGVR+S R    
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 1661 XXXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPT-RS 1485
                  ALNE++A+RL+QQDPEA RKLRD  R GSG RG+SP+KR+ FT+A++ S +  S
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 1484 GSASHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLI 1305
             S SHS++E STGDGG+ADSD++     S+ PT+++IREITIRRSKLAKWFMEP+FE+LI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDGEPG-SQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 1304 VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1125
            VGCFVRVGIG+S+SGPIYRLC+VRNVDA+DPDR YKL+NKTTYKYLNV+WGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 1124 MAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQE 945
            MAMISDS+PT +EY QWVREVERSGGRMP+KQ++LEKKEAI+K+NTFVYSA TVKQMLQE
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 944  KKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRL 765
            KKSA+ RPLNVAAEKDRLR E+E+A+ + D+AEVERI+AR+QELEASRQ Q  D KAIRL
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 764  AEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-------HXXX 606
            AEMNRKNR ENF+NAS+LKPVNT LKAGE GYDPFSRRWTRSRNYYVSK           
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539

Query: 605  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNF 426
                                                  GKLVDT APVDQGT SN LHNF
Sbjct: 540  NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNF 599

Query: 425  DLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 246
            +LPISL  LQKFGG QGAQAGFMARKQRIEAT+GCRV END +RH LTLTVSDYKRRRGL
Sbjct: 600  ELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGL 659

Query: 245  L 243
            L
Sbjct: 660  L 660


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  767 bits (1981), Expect = 0.0
 Identities = 414/660 (62%), Positives = 475/660 (71%), Gaps = 23/660 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT    +NRH  PPSRRRR+                        KPS
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDDDRXXXXXXXXXXXXXXXXXXXXD------LYKDEDDRKKLAQ 1812
             SQVPLKKRLDPAERDDD                      +      LYK+EDDR+KLAQ
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 1811 MTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQKNSRGVRSSTRFXXX 1662
            MTELERE+IL +RA KR DK   EK ++          RK +P   +SRGVRSS R    
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 1661 XXXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSG 1482
                  ALNE+RAKRL+QQDPEA RKLRD  R  SG RG SPVKR+PFTA+++ S ++S 
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 1481 SASHSDEED--STGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDL 1308
            S S S+ ED  STGDGG+ DSD+++       PT+++I+EITIRRSKLAKWFMEPFFE+L
Sbjct: 241  SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 1307 IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1128
            IVGC+VRVGIG+S+SGPIYRLC+VRNVDA++P+R YKL+NKTTYKYLNVVWGNESSAARW
Sbjct: 301  IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 1127 QMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQ 948
            QMAMISDS P  EE+ Q +RE+ERSGGRMPSKQ+VLEKKEA+QK  TFVYSA TVKQMLQ
Sbjct: 361  QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 947  EKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIR 768
            EKKS + RPLN+AAEKDRLR ++E+A+ ++DEAEVERIK RLQ+LEASRQAQE D KA+R
Sbjct: 421  EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 767  LAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-----HXXXX 603
            LAEMNRKNR ENFKNAS+LKPVNTGLKAGE GYDPFSRRWTRSRNYYV+K          
Sbjct: 481  LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 602  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFD 423
                                                 GKLVDT+APVD+GT SN LH+F+
Sbjct: 541  NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFE 600

Query: 422  LPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            +PISL  LQ+FGGPQGA AGFMARKQRIEATVGC+VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601  IPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  752 bits (1941), Expect = 0.0
 Identities = 408/658 (62%), Positives = 467/658 (70%), Gaps = 21/658 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MA+LE LLLEAAGRT    +NRH  PPSRRRR+                        KPS
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDD---DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMTE 1803
             SQVPLKKRLDP E DDD   +                     DLYKD+DDR+KLA+MTE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 1802 LEREMILEDRATKRSDKGLHEKFK---NRKGSPAQKN------SRGVRSSTRFXXXXXXX 1650
            L+REMIL DRA+K+ DK L EK +   + KG   Q        S  VRSS R        
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180

Query: 1649 XXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGSASH 1470
              ALNE+RAKRL+QQDPEA  KLRD  R GSG R     KR+ +TA ++ S ++S S S 
Sbjct: 181  DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240

Query: 1469 SDEED--STGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGC 1296
            S  ED  STGDGG+ DSD+E+    S+  T+++I+E+T+RRSKLAKW MEPFFE+LIVGC
Sbjct: 241  SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300

Query: 1295 FVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1116
            FVRVGIG+S+SGPIYRLC+VRNVDAS+PDRQYKLDNK T+KYLNVVWGNE+SAARWQMAM
Sbjct: 301  FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360

Query: 1115 ISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKS 936
            +SDS P  EE+ QWVREVERSGGRMP+K ++L+KKE+I+K NTFVYSA TVKQMLQEKKS
Sbjct: 361  VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420

Query: 935  ATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEM 756
            A+ RPLN+A EKDRLR E+E+A+ +NDE EV+RIK RLQELEASR+A++ D KAIRLAEM
Sbjct: 421  ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480

Query: 755  NRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-------HXXXXXX 597
            NRKNRVENFKNAS+LKPVNTGLKAGE GYDPFSRRWTRSRNYYV K              
Sbjct: 481  NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGN 540

Query: 596  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLP 417
                                               GKLVDTNAPVDQGT SN LHNF+LP
Sbjct: 541  NGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELP 600

Query: 416  ISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            ISL+VLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTL+V DYKRRRGLL
Sbjct: 601  ISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  744 bits (1922), Expect = 0.0
 Identities = 408/659 (61%), Positives = 473/659 (71%), Gaps = 22/659 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT    +NRH  P SRRR                          KPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDD-----DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQM 1809
             SQVPLKKRLDP ERDDD     +                     DLYKDEDDR+KL++M
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1808 TELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQKNSRGVRSSTRFXXXX 1659
            TEL+REMIL DRATK+ DK L  K  +          RK SP   +SR +R+S R     
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASAR-SADR 178

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKRL+QQDPEA R+LR+  R  +G R +SP KR+PFT+ ++ S + S S
Sbjct: 179  SAKNDALNELRAKRLKQQDPEAHRRLREASRN-AGSRHFSPPKRKPFTSTSLSSSSHSES 237

Query: 1478 AS--HSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLI 1305
             S  HSD+E STGDGG+ DSD+++  A S+ P++++++EITIRRSKLAKWFMEPFFE+LI
Sbjct: 238  ESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELI 297

Query: 1304 VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1125
            VGCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTTYKYLNVVWGNESSAARWQ
Sbjct: 298  VGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQ 357

Query: 1124 MAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQE 945
            MAM+SDS+P  EE+ QWV+EV+RSGGRMPSKQ+VLEKK+AIQK  TFVYSA TVKQMLQE
Sbjct: 358  MAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQE 417

Query: 944  KKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRL 765
            KKSA+ RPLNVAAEKDRLR E+E+A+ + DEAEVERIK RL ELEASRQA++ D KA++L
Sbjct: 418  KKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKL 477

Query: 764  AEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-----HXXXXX 600
            AEMNRKNR ENFKNAS++KPVNTGLKAGE GYDPFSRRWTRSRNYY +K           
Sbjct: 478  AEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNS 537

Query: 599  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDL 420
                                                GKLVDT+APVDQGT SN LHNF+L
Sbjct: 538  VNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFEL 597

Query: 419  PISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            PISLA+LQKFGG QGAQAGFMARKQ+IEATVG RV ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 598  PISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  744 bits (1921), Expect = 0.0
 Identities = 407/663 (61%), Positives = 474/663 (71%), Gaps = 26/663 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRR-RKAXXXXXXXXXXXXXXXXXXXXXXXKP 1977
            MADLE LLLEAAGRT  + +NR+   PSRRR R+                        KP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 1976 SSSQVPLKKRLDPAERD------DDDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLA 1815
            S SQVPLKKRL+  ERD      D+                      DLYKDEDDRKKLA
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 1814 QMTELEREMILEDRATKRSDKGLHEKFK----------NRKGSPAQKNSRGVRSSTRFXX 1665
            QM+EL+RE+IL DRA K+ DK L EK +          +RK +P   +SRGVRSS R   
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 1664 XXXXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPT-R 1488
                   ALNE+RAKRL+QQDPEA RKLRD  R  +G RG+S VK+  FT+A++ S +  
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240

Query: 1487 SGSASHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDL 1308
            SGS SHS++E STGDGG+ADSDE+     SK PTYE+I+EITIRR+KLAKWFMEP+FE+L
Sbjct: 241  SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299

Query: 1307 IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1128
            I+GCFVRVGIG+S+SGP+YRLC+VRNVDA++PD+ YKL+NK+TYKYLNV WG ++SAARW
Sbjct: 300  IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359

Query: 1127 QMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQ 948
            QMAM+SDS PT EEY QWVREVE  GGR+PSKQ++LEKKEAI+K+NTFVYSA TVKQMLQ
Sbjct: 360  QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419

Query: 947  EKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIR 768
            EKKSA+ RPLNVAAEKDRLR E+E+A+ ++DEAEVERI AR++ELEASR A+  D KAIR
Sbjct: 420  EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479

Query: 767  LAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK--------HX 612
            LAEMNRKNRVENF+NAS++KPVNTGLKAGE GYDPFSRRWTRSRNYYVSK          
Sbjct: 480  LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539

Query: 611  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELH 432
                                                    GKLVDT+APVDQGT SN +H
Sbjct: 540  KISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMH 599

Query: 431  NFDLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRR 252
            +F+L ISL  LQ+FGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTV DYKRRR
Sbjct: 600  SFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRR 659

Query: 251  GLL 243
            GLL
Sbjct: 660  GLL 662


>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  743 bits (1918), Expect = 0.0
 Identities = 406/657 (61%), Positives = 475/657 (72%), Gaps = 20/657 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT  + +NRH  PPSRRR                          KPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDD------DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQ 1812
             SQVPLKKRLDP+ERDDD                            DLYKDEDDR+KL++
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 1811 MTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQKNSRGVRSSTRFXXX 1662
            MTEL+REMIL DRATK+ DK L  K  +          RK SP   +SR +R+S R    
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASAR-SAD 178

Query: 1661 XXXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSG 1482
                  ALNE+RAKRL+QQDPEA RKLR+  R  +G R +SP KR+PFT+ ++ S + S 
Sbjct: 179  RSAKNDALNELRAKRLKQQDPEAHRKLREASRN-AGPRHFSPPKRKPFTSTSLSSSSHSE 237

Query: 1481 SAS--HSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDL 1308
            S S  HSD+E STGDGG+ DSD+++    S+ P++++I+EITIRRSKLAKWFMEPFFE+L
Sbjct: 238  SESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 297

Query: 1307 IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1128
            IVGCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTTYKYLNVVWGNESSAARW
Sbjct: 298  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 357

Query: 1127 QMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQ 948
            QMAM+SDS+P  EE+ QWV+EV+RSGGRMP+KQ+VLEKK+AIQK  TFVYSA TVKQMLQ
Sbjct: 358  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQ 417

Query: 947  EKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIR 768
            EKKSA+ RPLNVAAEKDRLR E+E+A+ ++DEAEV+RIKARLQELEASR A++ D KA++
Sbjct: 418  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALK 477

Query: 767  LAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSKH--XXXXXXX 594
            LAEMNRKNR ENFKNAS+LKPVNTGLKAGE GYDPFSRRWTRSRNYY  +          
Sbjct: 478  LAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVN 537

Query: 593  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPI 414
                                              GKLVDT+APVDQGT SN LHNF+LPI
Sbjct: 538  GIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPI 597

Query: 413  SLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            SLA+LQK+GG QGAQAGFMARKQRIE+TVG RV ENDGRRH+LTL+VSDYKRRRGLL
Sbjct: 598  SLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  741 bits (1914), Expect = 0.0
 Identities = 408/659 (61%), Positives = 473/659 (71%), Gaps = 22/659 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT    +NRH  PPSRRR                          KPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDD-----DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQM 1809
             SQVPLKKRLDP ERDDD     +                     DLYKDEDDR+KL++M
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1808 TELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQKNSRGVRSSTRFXXXX 1659
            TEL+REMIL DRATK+ DK L  K  +          RK SP   +SR +R+S R     
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASAR-SADR 178

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKRL+QQDPEA R+LR+  R  +G R +SP KR+ FT+ ++ S + S S
Sbjct: 179  SAKNDALNELRAKRLKQQDPEAHRRLREASRN-AGPRHFSPPKRKTFTSTSLSSSSHSES 237

Query: 1478 AS--HSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLI 1305
             S  HSD+E STGDGG+ADSD+++  A S+ P++++I+EITIRRSKLAKWFMEPFFE+LI
Sbjct: 238  ESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 297

Query: 1304 VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1125
            VGCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTTYKYLNVVWGNESSAARWQ
Sbjct: 298  VGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQ 357

Query: 1124 MAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQE 945
            MAM+SDS+P  EE+ QWV+EV+ SGGRMPSKQ+VLEKK+AIQK  TFVYSA TVKQMLQE
Sbjct: 358  MAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQE 417

Query: 944  KKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRL 765
            KKSA+ RPLNVAAEKDRLR E+E+A+ ++DEAEVERIK RLQELEASRQA++ D KA++L
Sbjct: 418  KKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKL 477

Query: 764  AEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-----HXXXXX 600
            AEMNRKNR ENFKNAS+LKPVN GLKAGE GYDPFSRRWTRSRNYY +K           
Sbjct: 478  AEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNI 537

Query: 599  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDL 420
                                                GKLVDT+APVDQGT SN LHNF+L
Sbjct: 538  VNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFEL 597

Query: 419  PISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            PISLA+LQK+GG  GAQAGFMARKQRIE+TVG RV ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 598  PISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  736 bits (1900), Expect = 0.0
 Identities = 402/661 (60%), Positives = 469/661 (70%), Gaps = 24/661 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT+   +NRH  PPSRR+R+                        KPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDDD------RXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQ 1812
             SQVPLKKRLDP ERDDD                            DLYKD+DDR+KLA 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 1811 MTELEREMILEDRATKRSDKGLHEKFKNR----KGSPAQKN-----SRGVRSSTRFXXXX 1659
            M+EL+REMIL DRA+K++DK L+E  + +    K +P++K      S  +RSS R     
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKRL+QQDPEA RKLRD  R  +  R +SP KR+PFTA ++ S ++S S
Sbjct: 181  AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 1478 ASH--SDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLI 1305
             S   SD+E STGDGG+ DSD+E++   S  PT+E+I+E+TIRRSKLAKW MEPFFE+LI
Sbjct: 241  ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 1304 VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1125
            VGCFVRVGIG+SRSGPIYRLC+VRNVDA++PDRQYKL+NK T+KYLNV+WGNE+SAARWQ
Sbjct: 301  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 1124 MAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQE 945
            MAM+SDS+P  +EY QWV+EVER+GGRM SKQ++LEKKEAIQK N FVYSA TVKQMLQ+
Sbjct: 361  MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 944  KKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRL 765
            KKSA+ RPLN+AAEKDRLR EM++A  +NDEAEVERIK RLQ+LEASR+ Q  D KAIRL
Sbjct: 421  KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 764  AEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-------HXXX 606
            AEMNRKNRVENFKNAS+L+P+   LKAGE GYDPFSRRWTRSRNYYVS            
Sbjct: 481  AEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 539

Query: 605  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNF 426
                                                  GKLVDTNAPVD GT SN LHNF
Sbjct: 540  GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 599

Query: 425  DLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 246
            +LPISLA+LQKFGG  GAQAGF+ARKQRIEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 600  ELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659

Query: 245  L 243
            L
Sbjct: 660  L 660


>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  735 bits (1898), Expect = 0.0
 Identities = 401/651 (61%), Positives = 466/651 (71%), Gaps = 14/651 (2%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRTS   K+RH    SRRRR                         KPS
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDDD-----DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQM 1809
             +QVPLKKRLDP E DD+     +                     DLYKDEDDR+KLA+M
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 1808 TELEREMILEDRATKRSDKGLHEKFKNRKGSPAQKNSRGVRSSTRFXXXXXXXXXALNEI 1629
            +EL+RE+IL DRA K+ DK L EKF+ +K +P   +SR VRSS R          ALNE+
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKKETPPLPSSR-VRSSARSADRAAAKDDALNEL 179

Query: 1628 RAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAA--TIGSPTRSGSASHSDEED 1455
            RAKRL+QQDPEA RKLRD  R  SG R +S + R+ FTA   +  S + S S SHS+++ 
Sbjct: 180  RAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSEDDG 239

Query: 1454 STGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVGIG 1275
            STG+  + DSD+E+    S+  T+++I+EITIRRSKLAKW MEPFFE+LIVGCFVRVGIG
Sbjct: 240  STGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIG 295

Query: 1274 KSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPT 1095
            +S+SGPIYRLC+VRNVDASDPDR+YKL+NKTT+KYLNVVWGNE+SAARWQMAMISDS+P 
Sbjct: 296  RSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPL 355

Query: 1094 REEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKSATWRPLN 915
             EE+ QWVREVERSGGR+PSKQ+VLEKKEAI+K NTFVYSA TVKQM++EKKSA+ RPLN
Sbjct: 356  EEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRPLN 415

Query: 914  VAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNRVE 735
            +A EKDRLR E+E+A+ ++D+AEVERIK RLQ+LEA RQ+Q  D KA+RLAEMNRKNRVE
Sbjct: 416  IALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNRVE 475

Query: 734  NFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-------HXXXXXXXXXXXXX 576
            NFKNAS+LKPV TGLKAGE GYDPFSRRWTRSRNYYVSK                     
Sbjct: 476  NFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALADI 535

Query: 575  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVLQ 396
                                        GKL+DT+APVD GT SN +HNF+LPISLA LQ
Sbjct: 536  ESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLATLQ 595

Query: 395  KFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            KFGGPQGAQ GF+ARKQRIEATVGCRVPENDGRRHALTLTVSDYKRR GLL
Sbjct: 596  KFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  734 bits (1895), Expect = 0.0
 Identities = 400/665 (60%), Positives = 470/665 (70%), Gaps = 28/665 (4%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRK-AXXXXXXXXXXXXXXXXXXXXXXXKP 1977
            MADLE LLLEAAGRT  + +NR+  PPSRRR++                         KP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 1976 SSSQVPLKKRLDPAERDDDDRXXXXXXXXXXXXXXXXXXXXD------LYKDEDDRKKLA 1815
            S SQVPLKKRL+  ERDD+                             LYKDEDDR+KLA
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 1814 QMTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQKNSRGVRSSTRFXX 1665
            QM+EL+RE+IL DRA K+ DK L EK ++          RK +P   +SRGVRSS R   
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 1664 XXXXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPT-- 1491
                   ALNE+RAKRL+QQDPEA RKLRD  R  +G RG++ VK+  FT+A + S +  
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240

Query: 1490 -RSGSASHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFE 1314
              SGS SHS++E STGDGG+ADSDE+     S+ PTYE+I+EITIRR+KLAKWFMEP+FE
Sbjct: 241  SESGSRSHSEDEGSTGDGGMADSDEDGDPG-SRGPTYEDIKEITIRRTKLAKWFMEPWFE 299

Query: 1313 DLIVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAA 1134
            +LI+GCFVRVGIG+S++GP+YRLC+VRNVDA++PD+ YKL+NK+TYKYLNV WG +SSAA
Sbjct: 300  ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359

Query: 1133 RWQMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQM 954
            RWQMAM+SDS+PT EEY QWVRE ER GGR+PSKQ++LEKKEAI+K+NTFVYSA TVKQM
Sbjct: 360  RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419

Query: 953  LQEKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKA 774
            LQEKKSA+ RPLNVAAEKDRLR E+E+A+ R+DEAEVERI+AR+ ELEASRQA+  D KA
Sbjct: 420  LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479

Query: 773  IRLAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-------- 618
            +RLAEMNRKNRVENF+NAS+LKP+NTGLKAGE GYDPFSRRWTRSRNYYVS         
Sbjct: 480  LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAV 539

Query: 617  HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNE 438
                                                      GKLVDT+APVDQGT SN 
Sbjct: 540  AASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTESNT 599

Query: 437  LHNFDLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKR 258
            +HNF+L ISL  LQKF GPQGA AGFMARKQRIEA VGC+V ENDGRRHALTLTV DYKR
Sbjct: 600  MHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKR 659

Query: 257  RRGLL 243
            RRGLL
Sbjct: 660  RRGLL 664


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  730 bits (1884), Expect = 0.0
 Identities = 403/661 (60%), Positives = 473/661 (71%), Gaps = 24/661 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGN-DKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKP 1977
            MADLE LLLEAAGRT G   +NRH  PPSRRRR                         KP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 1976 SSSQVPLKKRLDPAERDDD------DRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLA 1815
            S SQVPLKKRLDP ERDDD                            DLYKDEDDR+KL+
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120

Query: 1814 QMTELEREMILEDRATKRSDKGLHEKFKNR----------KGSPAQKNSRGVRSSTRFXX 1665
            +M+EL+REMIL DRA+K+ DK L  K  ++          K SP   +SR +R+S R   
Sbjct: 121  EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASAR-SA 178

Query: 1664 XXXXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRS 1485
                   ALNE+RAKRL+QQDPEA+R+LR+  R  SG R +SP KR+ FT+A + S + S
Sbjct: 179  DRSAKNVALNELRAKRLKQQDPEARRRLREASRN-SGPRRFSPPKRKSFTSANLSSSSHS 237

Query: 1484 GS--ASHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFED 1311
             S   SHSD+E STGDGG+ADSD+++  + S+ P++++I+EITIRRSKLAKWFMEPFFE+
Sbjct: 238  DSDSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEE 297

Query: 1310 LIVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAAR 1131
            LIVGCFVRVGIG+S++GPIYRLC+V+NVD+SDPDRQYKL+N+TT+KYLNVVWGNESSAAR
Sbjct: 298  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAAR 357

Query: 1130 WQMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQML 951
            WQMAM+SDS P  EE+ QWV+EVERSGGRMP+KQ+VLEKK+AIQK  TFVYSA+TVKQML
Sbjct: 358  WQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQML 417

Query: 950  QEKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAI 771
            QEKKS++ RPLNVAAEKDRLR EME+A+ +NDEAEVERIK R+QELEASR A+  D KA+
Sbjct: 418  QEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKAL 477

Query: 770  RLAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-----HXXX 606
            +LAEMNRKNR ENFKNAS+L+PVN GLKAGE GYDPFSRRWTRSRNYYV+K         
Sbjct: 478  KLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPGEKAAARK 537

Query: 605  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNF 426
                                                  GKLVDT+APVDQGT SN LHNF
Sbjct: 538  NTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNFLHNF 597

Query: 425  DLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 246
            +LPISLA+L K+GG QGAQAGFMARKQR+EATVG RV ENDGRRH LTL+V DYKRRRGL
Sbjct: 598  ELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGL 657

Query: 245  L 243
            L
Sbjct: 658  L 658


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  714 bits (1844), Expect = 0.0
 Identities = 391/651 (60%), Positives = 454/651 (69%), Gaps = 14/651 (2%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT+   +NRH +  S+RRR+                         PS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRK--PS 58

Query: 1973 SSQVPLKKRLDPAERDDDDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMTELER 1794
             SQVPLKKRLDPAERDDD                          +E D     QMTELER
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS-----SNESDDDNHGQMTELER 113

Query: 1793 EMILEDRATKRSDKGLHEKFKNR---------KGSPAQKNSRGVRSSTRFXXXXXXXXXA 1641
            EM++ +R  K+ DK L +KF++R         K +P   +SR  R + R          A
Sbjct: 114  EMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDA 173

Query: 1640 LNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGSAS--HS 1467
            LNE+RAKRL+QQDPEA R+LRD  R GSG R  SPVKR+ FT A + S ++S S S  HS
Sbjct: 174  LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHS 233

Query: 1466 DEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGCFVR 1287
            D+E STGDGG+ADSD++      + PTY++I+EITIRRSKLAKWFMEPFFE+LIVGCFVR
Sbjct: 234  DDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVR 292

Query: 1286 VGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISD 1107
            VGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM+SD
Sbjct: 293  VGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSD 352

Query: 1106 SSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKSATW 927
            S P  EE+ QW+REVER+GGRMPSKQ+VLEKKE+IQK NTFVYSA TVKQMLQEKKSA+ 
Sbjct: 353  SPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASS 412

Query: 926  RPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRK 747
            RPLNVAAEKDRLR E+E+A+ R+D+ ++ERIK RLQELEASR ++  D KAIRLAEMNRK
Sbjct: 413  RPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRK 472

Query: 746  NRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK---HXXXXXXXXXXXXX 576
            NRVENFKNAS+LK VNT LKAGE GYDPFSRRWTRSRNYY+SK                 
Sbjct: 473  NRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVP 532

Query: 575  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVLQ 396
                                        GKLVDTNAP+D GT SN LH+F+L ISL  L+
Sbjct: 533  GGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALK 592

Query: 395  KFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            KFGGPQG  AGFMARKQRIEATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 593  KFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  711 bits (1834), Expect = 0.0
 Identities = 389/651 (59%), Positives = 452/651 (69%), Gaps = 14/651 (2%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADLE LLLEAAGRT+   +NRH +  S+RRR+                         PS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRK--PS 58

Query: 1973 SSQVPLKKRLDPAERDDDDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMTELER 1794
             SQVPLKKRLDP ERDDD                          +E D     QMTELER
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS-----SNESDDDNHGQMTELER 113

Query: 1793 EMILEDRATKRSDKGLHEKFKNR---------KGSPAQKNSRGVRSSTRFXXXXXXXXXA 1641
            EM++ +R  K+ DK L +KF++R         K +P   +SR  R + R          A
Sbjct: 114  EMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDA 173

Query: 1640 LNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGSAS--HS 1467
            LNE+RAKRL+QQDPEA R+LRD  R GSG R  SPVKR+ FT A + S ++S S S  HS
Sbjct: 174  LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHS 233

Query: 1466 DEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGCFVR 1287
            D+E STGDGG+ADSD++      + PTY++I+EITIRRSKLAKWFMEPFFE+LIVGCFVR
Sbjct: 234  DDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVR 292

Query: 1286 VGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISD 1107
            VGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM+SD
Sbjct: 293  VGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSD 352

Query: 1106 SSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKSATW 927
            S P  EE+ QW+REVER+ GRMPSKQ+VLEKK++IQK NTFVYSA TVKQMLQEKKSA+ 
Sbjct: 353  SPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKSASS 412

Query: 926  RPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRK 747
            RPLNVAAEKDRLR E+E+A+ R+DE ++ERIK RLQELEASR ++  D KAIRLAEMNRK
Sbjct: 413  RPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRK 472

Query: 746  NRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK---HXXXXXXXXXXXXX 576
            NRVENFKNAS+LK VNT LKAGE GYDPFSRRWTRSRNYY+SK                 
Sbjct: 473  NRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVP 532

Query: 575  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVLQ 396
                                        GKLVDTNAP+D GT SN LH+F+L ISL  L+
Sbjct: 533  GGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALK 592

Query: 395  KFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            KFGGPQG  AGFMARKQRIEATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 593  KFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  699 bits (1805), Expect = 0.0
 Identities = 392/662 (59%), Positives = 464/662 (70%), Gaps = 25/662 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            MADL+ LLLEAAGRTS   K+RH    S+RRR                         KPS
Sbjct: 1    MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 1973 SSQVPLKKRLDPAERDD-----DDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQM 1809
             SQVPLKKRLDP+E  D     D+                     DLYKDE+DR+KLA+M
Sbjct: 61   GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120

Query: 1808 TELEREMILEDRATKRSDKGLHEKFK----------NRKGSPAQKNSRGVRSSTRFXXXX 1659
            +EL+RE+IL DRA K+ DK L EKF+          +RK +P   +SR VRSS R     
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSR-VRSSARSADRA 179

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKRL+QQDPEA RKLRD  R   G + +S   ++ F+A    S ++S S
Sbjct: 180  AAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDS 239

Query: 1478 AS--HSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLI 1305
             S  HSD++ S+ D  + DSD+E+ +   +  T+E+I+EITIRRS+LAKW MEPFFE+LI
Sbjct: 240  ESRSHSDDDGSSADDAI-DSDDERGN---QGLTFEDIKEITIRRSRLAKWLMEPFFEELI 295

Query: 1304 VGCFVRVGIGKSRSG-PIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1128
            VGC VRVGIGK++SG PIYRLC V NVD+SDPDRQYKL+NKTT+KYLNVVWGNE+SAARW
Sbjct: 296  VGCCVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARW 355

Query: 1127 QMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQ 948
            QMAM+SDS P  EEYDQWVREVE++GGR+PSK++VLEKKEAI+KTNTFVYSA+TVKQM+Q
Sbjct: 356  QMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKTVKQMIQ 415

Query: 947  EKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIR 768
            EKKSA+ RPLN+A EKDRLR E+E+A+ ++D+AEVERIKARL++LEA +Q+Q  D KA+R
Sbjct: 416  EKKSASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARQQSQGKDSKAVR 475

Query: 767  LAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSK-------HXX 609
            LAEMNRKNRV+NFKNAS LKPV TGLKAGE GYDPFSRRWTRSRNYYVSK          
Sbjct: 476  LAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQKDDAEA 535

Query: 608  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHN 429
                                                   GKL+DT APVDQGT+SN LHN
Sbjct: 536  NAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGTSSNPLHN 595

Query: 428  FDLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRG 249
            F+LPISLA LQKFGGPQGAQ GFMARKQRIEATVG RVPE+DGRRHALTL+VSDYKRRRG
Sbjct: 596  FELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRG 655

Query: 248  LL 243
            LL
Sbjct: 656  LL 657


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  672 bits (1733), Expect = 0.0
 Identities = 376/661 (56%), Positives = 447/661 (67%), Gaps = 24/661 (3%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXK-- 1980
            MADLEKLLLEAAGR      N H   PSRR+R+                        +  
Sbjct: 1    MADLEKLLLEAAGR------NIHSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHGYRGR 54

Query: 1979 -PSSSQVPLKKRLDPAERDDDDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMTE 1803
             PS++QVPLKKR + + +DDD                      DLYKDEDDR+KL++MTE
Sbjct: 55   KPSATQVPLKKRFETSGKDDDVSGDDDGSDREGDSSEDSDVGDDLYKDEDDRQKLSEMTE 114

Query: 1802 LEREMILEDRATKRSDKGLHEKF--KNRKGSPAQKNSRG----------VRSSTRFXXXX 1659
            L+REMIL DRA+K+ DK    K   K  KG+ A  + R           VR+S R     
Sbjct: 115  LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKRL+Q DPEAK KL++  +  SGGRG   +K +PF +  + S + S S
Sbjct: 175  AAKDGALNELRAKRLKQLDPEAKLKLKEGSK--SGGRGLFSLKGKPFASTGLSSSSHSDS 232

Query: 1478 --ASHSDEEDSTGDGGLADSDEEK--TSAESKWPTYEEIREITIRRSKLAKWFMEPFFED 1311
               S SD+E S GDGG+ DSD+++  T +  + P++E+I+EITIRRSKLAKWFMEPFFE+
Sbjct: 233  DSRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEE 292

Query: 1310 LIVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAAR 1131
            LIVGCFVRVGIG+S++GPIYRLC+V+NVDASDPDRQYKLDNKTTYKYLNVVWGNE+SAAR
Sbjct: 293  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAAR 352

Query: 1130 WQMAMISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQML 951
            WQMAM+SDS P  EE+ QWV+EVERSGGRM  K +V+EK +AIQK N+FVYSA TVKQM+
Sbjct: 353  WQMAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMI 412

Query: 950  QEKKSATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAI 771
            +EKKS + RPLNVAAEKDRL+ ++E+A  + D AEVE+IK RLQELEASR+ Q  D KA+
Sbjct: 413  EEKKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKAL 472

Query: 770  RLAEMNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSKH-----XXX 606
            RL+EMNRKNR ENFKNAS+LKPVN GLKAGE GYDPFSRRWTRSRNYY +K         
Sbjct: 473  RLSEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGN 532

Query: 605  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNF 426
                                                  GKLVDT APVDQGT SN LHNF
Sbjct: 533  NSSGGAVGDRGSNGVGATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLHNF 592

Query: 425  DLPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 246
            +LPISL +LQKFGG QG  AGF+A+KQRIE  VG RVPENDG+ H LTLTVSDYKRRRGL
Sbjct: 593  ELPISLTILQKFGGAQGVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGL 652

Query: 245  L 243
            L
Sbjct: 653  L 653


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  669 bits (1726), Expect = 0.0
 Identities = 360/652 (55%), Positives = 445/652 (68%), Gaps = 15/652 (2%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            M DLE LLLEAAGRT+   ++RH  PPS RRR+                         PS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDDSDEDRGYASRK-PS 57

Query: 1973 SSQVPLKKRLDPAERDD-----DDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQM 1809
             SQVPLKKRL+ AER+D     +                      DLYK+E+DR+KLA M
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 1808 TELEREMILEDRATKRSDKGLHEKFKNRKGS---PAQKN-------SRGVRSSTRFXXXX 1659
            TE +REMIL +RA K+ DK   EK ++++ S   P  K        SRGVRSS R     
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKR++QQDP A RKLRD  + GSG R +S  KR+P  ++ + S ++S S
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 1478 ASHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVG 1299
             S S  +D   +GG+ DSD++++      PT+E+++E+TIRRSKLAKW MEPFFE+LIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDRSDV----PTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 1298 CFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMA 1119
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTT+KYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1118 MISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKK 939
            MISD  P  EEY QW+REVER+ GRMP+KQ++ EKKEAIQ+TN+FVYSAETVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 938  SATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAE 759
            SA+ RP+NVAAEKDRLR E+E+A+ +NDEA VERIK+++++L+ASR  + +D+KA++LAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 758  MNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSKHXXXXXXXXXXXX 579
            MN+KNR ENFKNAS++K +   LKAGE GYDPFSRRWTRS NYY  K+            
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKN-KGKDGEENEAA 531

Query: 578  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVL 399
                                         GKL+DT AP+ QG   N+LHNF+L +SL  L
Sbjct: 532  VAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTAL 591

Query: 398  QKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            QK+GGPQG Q  FMARKQ  EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 592  QKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
          Length = 643

 Score =  667 bits (1720), Expect = 0.0
 Identities = 359/652 (55%), Positives = 444/652 (68%), Gaps = 15/652 (2%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            M DLE LLLEAAGRT+   ++ H  PPS RRR+                         PS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSSH--PPSSRRREGSYSDGSSDSRDDSDEDRGYASRK-PS 57

Query: 1973 SSQVPLKKRLDPAERDD-----DDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQM 1809
             SQVPLKKRL+ AER+D     +                      DLYK+E+DR+KLA M
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 1808 TELEREMILEDRATKRSDKGLHEKFKNRKGS---PAQKN-------SRGVRSSTRFXXXX 1659
            TE +REMIL +RA K+ DK   EK ++++ S   P  K        SRGVRSS R     
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 1658 XXXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGS 1479
                 ALNE+RAKR++QQDP A RKLRD  + GSG R +S  KR+P  ++ + S ++S S
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 1478 ASHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVG 1299
             S S  +D   +GG+ DSD++++      PT+E+++E+TIRRSKLAKW MEPFFE+LIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDRSDV----PTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 1298 CFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMA 1119
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTT+KYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1118 MISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKK 939
            MISD  P  EEY QW+REVER+ GRMP+KQ++ EKKEAIQ+TN+FVYSAETVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 938  SATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAE 759
            SA+ RP+NVAAEKDRLR E+E+A+ +NDEA VERIK+++++L+ASR  + +D+KA++LAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 758  MNRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSKHXXXXXXXXXXXX 579
            MN+KNR ENFKNAS++K +   LKAGE GYDPFSRRWTRS NYY  K+            
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKN-KGKDGEENEAA 531

Query: 578  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVL 399
                                         GKL+DT AP+ QG   N+LHNF+L +SL  L
Sbjct: 532  VAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTAL 591

Query: 398  QKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            QK+GGPQG Q  FMARKQ  EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 592  QKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
            gi|557088572|gb|ESQ29352.1| hypothetical protein
            EUTSA_v10023338mg [Eutrema salsugineum]
          Length = 644

 Score =  666 bits (1718), Expect = 0.0
 Identities = 352/651 (54%), Positives = 444/651 (68%), Gaps = 14/651 (2%)
 Frame = -2

Query: 2153 MADLEKLLLEAAGRTSGNDKNRHLSPPSRRRRKAXXXXXXXXXXXXXXXXXXXXXXXKPS 1974
            M DL+ LLLEAAGRT+   ++RH  PPS RRR+                         PS
Sbjct: 1    MVDLDDLLLEAAGRTNAPGRSRHSHPPSSRRREGSYSDGGSDSRDDSDEERGYASRK-PS 59

Query: 1973 SSQVPLKKRLDPAERD----DDDRXXXXXXXXXXXXXXXXXXXXDLYKDEDDRKKLAQMT 1806
             SQVPLKKRL+    D    D+                      DLYK+E+DR+KLA MT
Sbjct: 60   GSQVPLKKRLEAEREDRAARDEAGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 119

Query: 1805 ELEREMILEDRATKRSDKGLHEKFKNRKG---SPAQKN-------SRGVRSSTRFXXXXX 1656
            E +REMIL +RA K+ DK   EK ++++    +P  K        SRGVRSS R      
Sbjct: 120  EFQREMILAERADKKGDKNFTEKLRSKREKEKTPVSKKETQPLPASRGVRSSARSADRAA 179

Query: 1655 XXXXALNEIRAKRLRQQDPEAKRKLRDTGREGSGGRGYSPVKRRPFTAATIGSPTRSGSA 1476
                ALNE+RAKR++QQ+P + RKLRD  + GSG R +S +KR+P  ++ + + ++S S 
Sbjct: 180  AKDDALNELRAKRMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNSSQSDSD 239

Query: 1475 SHSDEEDSTGDGGLADSDEEKTSAESKWPTYEEIREITIRRSKLAKWFMEPFFEDLIVGC 1296
            S S  +D   +GG+ DSD++++      PT+E+I++ITIRRSKLAKW MEPFFE+LIVGC
Sbjct: 240  SRSQSDDEGSNGGMVDSDDDRSDV----PTFEDIKDITIRRSKLAKWLMEPFFEELIVGC 295

Query: 1295 FVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1116
            FVRVGIG+S++GPIYRLC+V+NVDA+DPD+ YKL+NKTT+KYLN +WG+ESSAARWQMAM
Sbjct: 296  FVRVGIGRSKNGPIYRLCMVKNVDATDPDKTYKLENKTTHKYLNCIWGHESSAARWQMAM 355

Query: 1115 ISDSSPTREEYDQWVREVERSGGRMPSKQEVLEKKEAIQKTNTFVYSAETVKQMLQEKKS 936
            ISD  P  EEY QW+REVER+ GRMP+KQ++ EKKEAI++ N+FVYSAETVKQMLQEKKS
Sbjct: 356  ISDGYPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFVYSAETVKQMLQEKKS 415

Query: 935  ATWRPLNVAAEKDRLRTEMEMARMRNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEM 756
            A+ RP+N+AAEKDRLR E+E+A+++NDEA VERIKA++++LEASR+ +E+D+KA++LAEM
Sbjct: 416  ASVRPMNIAAEKDRLRKELEVAQIKNDEAGVERIKAKIKQLEASREKKEVDKKALKLAEM 475

Query: 755  NRKNRVENFKNASQLKPVNTGLKAGEDGYDPFSRRWTRSRNYYVSKHXXXXXXXXXXXXX 576
            N+KNR ENFKNAS++K +   LKAGE GYDPFSRRWTRS NYY  K              
Sbjct: 476  NKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKR--KEGGDTEATAA 533

Query: 575  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLVDTNAPVDQGTASNELHNFDLPISLAVLQ 396
                                        GKL+DT AP+ QG   N LHNF+LP+SL  LQ
Sbjct: 534  AAVETNGAAAGENGVEATEAALEAAADAGKLIDTRAPIGQGAEHNLLHNFELPLSLTALQ 593

Query: 395  KFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 243
            K+GGPQG Q  FMARKQ  EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 594  KYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 644